mRNA_A-nodosum_M_contig989.15.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Match: A0A6H5JTW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW3_9PHAE) HSP 1 Score: 266 bits (679), Expect = 2.740e-79 Identity = 169/360 (46.94%), Postives = 200/360 (55.56%), Query Frame = 1
Query: 622 SGPEGVEWAGWECKFSGVDGKRTAVPEDYVPESLREWDVEVWGFETLTSEQLRRQKP--DEIG------LLYRKRARVFPEVGCALDNLSLEVIVQTLSLDDEGIFFGAFP--------GGSYVMGKKP-ASSQCLRMEAGLVVSGRDFGDAHPLQETDEGGAGEQS---------------RIRVEYQVE-------PKGNEGQGELAGCLGATVTVTRERRYRAAFDDGLLYKGGGLDAQKLRGLLCSDCFSEKEDAPVAAALAGEWRCDPGMWSDLRNSMDKGTPQQDLPDDTPPRLMLLERSETFWESRSDAAGGGIECLLMRGGLTLRSGPWRGDSDSDGQS------WGGAAAA 1566
SG G EWAGWEC+FSG DG+ AVPEDYVPESLREWDV WGFETLTSEQLR+++ D+ G LLYRKR RVFPE GCALDNLSLEV +T L+ + +F +FP G ++M ++P A S L++E GL+V G F D T GEQS R RVE +V+ G A LG VTVTRERRYR FDDGLLYKGGGLD+QKLRGLL S CF+E E++P LAG W PG W R G+ PR R A GI+ LL+ GG+T+RSGPW G + +DG S WG A AA
Sbjct: 63 SGRRGAEWAGWECRFSGADGRPVAVPEDYVPESLREWDV--WGFETLTSEQLRKKEDQGDKNGGGSCTDLLYRKRGRVFPETGCALDNLSLEVNARTSPLEGDDVFVASFPVEGSSSSSAGGHIMAQQPVAGSPSLQLEVGLLVPGVQFTDPSMSASTPAVQDGEQSAAXXXXXXDGGQECSRARVEVRVDGXXXXXXXXXXXXXGGAAATLGPIVTVTRERRYRNDFDDGLLYKGGGLDSQKLRGLLRSKCFAECEESPTTDDLAGNWVSGPGHWQLFRTHAAGGSA---------PRACTPTDGGGVAFDRETA---GIKTLLLPGGITVRSGPWLGAAAADGTSSAPEKRWGAAGAA 408
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Match: D8LLB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB7_ECTSI) HSP 1 Score: 180 bits (457), Expect = 3.460e-48 Identity = 124/293 (42.32%), Postives = 150/293 (51.19%), Query Frame = 1
Query: 805 LLYRKRARVFPEVGCALDNLSLEVIVQTLSLDDEGIFFGAFP--------GGSYVMGKKPAS-SQCLRMEAGLVVSGRDFGD-----AHPLQETDE-------------GGAGEQSRIRVEYQVE------PKGNEGQGELAGCLGATVTVTRERRYRAAFDDGLLYKGGGLDAQKLRGLLCSDCFSEKEDAPVAAALAGEWRCDPGMWSDLRNSMDKGTPQQDLPDDTPPRLMLLERSETFWESRSDAAGGGIECLLMRGGLTLRSGPWRGDSDSDGQS------WGGAAAA 1566
LLYRKR RVFPE GCALDNLSLEV T L+ +F +FP GG +++ K+PA+ S L++E GL+V G F D + P E E G E SR RVE +V+ A LG VTVTRER+YR FDDGLLYKGGGLD+QKLRGLL S CF+E E++P LAG W PG W R G+ PR R A GI+ LL+ GG+T+RSGPW G + +DG S WG A AA
Sbjct: 10 LLYRKRGRVFPETGCALDNLSLEVNALTSPLEGGDVFVASFPVEGSSSSSGGGHIVAKQPAAGSPSLQLEVGLLVPGAQFTDPSMSASTPAVEDGEKSAAXXXXXXXXXDGGRECSRARVEVRVDGXXXXXXXXXXXXXXXAAALGPIVTVTRERKYRDDFDDGLLYKGGGLDSQKLRGLLRSKCFAEYEESPTTDDLAGNWVSGPGHWQLFRTHAAGGSA---------PRACAPTGGGGATFDRETA---GIKTLLLPGGITVRSGPWLGAAAADGTSSAPEKRWGAAGAA 290
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Match: A0A836C8Z5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z5_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.890e-35 Identity = 95/243 (39.09%), Postives = 127/243 (52.26%), Query Frame = 1
Query: 568 QSHTATSLSMGMAMATRPSGPEGVEWAGWECKFSGVDGKRTAVPEDYVPESLREWDVEVWGFETLTSEQLRRQKPDEIGLLYRKRARVFPEVGCALDNLSLEVIVQTLSLDDEGIFFGAFPGGSYVMGKKPASSQCLRMEAGLVVSGRDFGDAHPLQETDEGGAGEQSRIRVEYQVEPKGNEGQGELAGCLGATVTVTRERRYRAAFDDGLLYKGGGLDAQKLRGLLCSDCFSEKEDAPVAAA 1296
+S T +S S +M SG EWAGWEC+FS V G+R ++PEDY+PESLREWDV VWGFE L SE+L + LYR+RA+V+PE GCALD+LSLE+ T+ L F P G+ ++ FG +H L+ + Q R+R+ V+ + +TV ER Y A+FDDG LY G LD + L L + CF+E E+AP A
Sbjct: 31 RSTTTSSASRACSMKVDTSG----EWAGWECRFSQVSGQRMSIPEDYIPESLREWDVPVWGFEVLHSERLTTGAGNAE--LYRRRAQVYPETGCALDHLSLEMRAATIPLTPPDATFLELPEGNGF----------------ALIQKAPFGGSHTLELVAVSSSDAQRRVRLLATVDV--------AKRAITRPLTVAVERCY-ASFDDGALYTHG-LDIKTLTETLGAKCFAEYEEAPEGVA 241
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Match: A0A7S2UYG3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYG3_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 8.260e-9 Identity = 53/167 (31.74%), Postives = 75/167 (44.91%), Query Frame = 1
Query: 814 RKRARVFPEVGCALDNLSLEV---IVQTLSLDDEGIFFGA----------FPGGSYVMGKKPASSQCLRMEAGLVVSGRDFGDAHPLQETDEGGAGEQS--------RIRVEYQVEPKGNEGQ-GELAGCLGATVTVTRERRYRAAFDDGLLYKGGGLDAQKLRGLL 1248
R RA VFP+ GCALDNL+++ + LS+ EG F A FPG Y+ +S ++E GL++ H L ET ++ R+RV + P G G G + V ER YR +D G +Y GGGLD Q L+ ++
Sbjct: 12 RTRAFVFPDTGCALDNLTVQKSKPVPLALSVASEGSFSRASLEGHGAKVVFPGVGYIHDIVDPASNDFKLETGLML--------HSLAETSLASGSNETPSEDNAWRRLRVSLSLRPPQTPGDNGWKLGVRPMEIVV--ERLYRKGYDSGDIYNGGGLDTQTLQQMI 168
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Match: A0A2V3J686_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J686_9FLOR) HSP 1 Score: 68.2 bits (165), Expect = 1.020e-8 Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = 1
Query: 640 EWAGWECKFSGVDGKRTAVPEDYVPESLREWDVEVWGFETLTSEQLRRQKPDEIGLLYRKRARVFPEVGCALDNLSLEVIVQT 888
EW G+E F G DGK +P+ YVP+ REW V GF+ +TS +L+ G+LY KR R P VGC D + EV + T
Sbjct: 94 EWFGFEGTF-GPDGKALPIPDRYVPDEFREWGVAPSGFDVVTSSRLKE------GVLYVKRTRALPSVGCEADAVVPEVSIST 169
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Match: A0A5J4YVA8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVA8_PORPP) HSP 1 Score: 60.8 bits (146), Expect = 3.380e-6 Identity = 32/90 (35.56%), Postives = 47/90 (52.22%), Query Frame = 1
Query: 640 EWAGWECKFSGVDGKRTAVPEDYVPESLREWDVEVWGFETLTSEQLRRQKPDEIGLLYRKRARVFPEVGCALDNLSLEVIVQTLSLDDEG 909
E+ G+E FS G ++PE +P++ R WD+E+ GF+ LTS ++ D L KR R+ P VGC D ++ EV L G
Sbjct: 127 EFVGYEVTFSARTGAPQSIPERLIPDAFRTWDIELLGFDALTSSRVDVDS-DGKSCLQLKRTRMLPAVGCEADAVATEVTDSMFRLVGSG 215
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Match: A0A835QLY9_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QLY9_VANPL) HSP 1 Score: 56.2 bits (134), Expect = 8.010e-5 Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = 1
Query: 499 SLASATLISTAACSREDKGASHAQSHTATSLSMGMAMATRPSGPEGVEWAGWECKFSGVDGKRTAVPEDYVPESLREWDVEVWGFET----LTSEQLRRQKPDEIGLLYRKRARVFPEVGCALDNLSLEVIVQTLS--LDDEGIFFGAFPGGSYV 945
S++S++ ++TAA S+ ++ A SL A A R SG EW G+ F+ +G +PE VPE REW+V+V+ ++T L SE + LL+ K ++FP VGC D +I + ++ ++ + G P G Y+
Sbjct: 38 SVSSSSSLATAAPSQNEQ--------IADSLCGWGAFAKRVSG----EWNGFGADFT-AEGNPVELPESVVPEDFREWEVQVYDWQTQCPTLASEST-------VPLLFYKLIKLFPTVGCEADAAVPYIIDKRIAGGTENNALALGYHPSGRYI 172
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Match: UPI0009E2C571 (uncharacterized protein LOC110021087 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E2C571) HSP 1 Score: 56.2 bits (134), Expect = 8.600e-5 Identity = 53/181 (29.28%), Postives = 89/181 (49.17%), Query Frame = 1
Query: 442 QPGVALTSANCRFRGSASSS-------LASATLISTAACSREDKGASHAQSHTATSLSMGMAMATRPSGPEGVEWAGWECKFSGVDGKRTAVPEDYVPESLREWDVEVWGFETLTSEQLRRQKP---DEIG--LLYRKRARVFPEVGCALDNLSLEVIVQTLS--LDDEGIFFGAFPGGSY 942
+PG + ++C F +SS L+++++ S+AA S + H ++ T SL+ A R SG EW G+ +FS +GK +PE VP++ REWDVE++ ++T Q P E G L + K ++ P VGC D + + + + +++ + FG P G Y
Sbjct: 23 RPGFLVPLSSCSFHSLRASSDSHKALTLSASSVSSSAATSAQSLHVQHEET-TPASLTHWGDFAVRVSG----EWDGFCAEFS-AEGKPVELPESVVPDAFREWDVELFDWQT--------QCPTLASEAGEPLFFYKLIKLLPTVGCEADAATRYSVRERIVGVSENDVLAFGYHPSGRY 189 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig989.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig989.15.1 >prot_A-nodosum_M_contig989.15.1 ID=prot_A-nodosum_M_contig989.15.1|Name=mRNA_A-nodosum_M_contig989.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=349bp MGMAMATRPSGPEGVEWAGWECKFSGVDGKRTAVPEDYVPESLREWDVEVback to top mRNA from alignment at A-nodosum_M_contig989:222223..227571- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig989.15.1 ID=mRNA_A-nodosum_M_contig989.15.1|Name=mRNA_A-nodosum_M_contig989.15.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5349bp|location=Sequence derived from alignment at A-nodosum_M_contig989:222223..227571- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig989:222223..227571- >mRNA_A-nodosum_M_contig989.15.1 ID=mRNA_A-nodosum_M_contig989.15.1|Name=mRNA_A-nodosum_M_contig989.15.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1047bp|location=Sequence derived from alignment at A-nodosum_M_contig989:222223..227571- (Ascophyllum nodosum dioecious)back to top |