mRNA_A-nodosum_M_contig9773.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A2S2NGY3_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NGY3_SCHGA) HSP 1 Score: 82.0 bits (201), Expect = 2.280e-18 Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 7 TYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKSLLLIPKLQSHFAEFLQQGYLK 195
T+RHRAGV PYTSSC+ AE CVF+KQSPPP LC R L+ K LL+ L+ +FAEFL+ G LK
Sbjct: 31 TFRHRAGVRPYTSSCDFAEPCVFSKQSPPPGLCPRPLLAQKPGLLLANLRRYFAEFLKCGSLK 93
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A166H365_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium 5G4 TaxID=1701326 RepID=A0A166H365_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 4.960e-18 Identity = 51/95 (53.68%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 7 TYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKS-----LLLIPKLQSHFAEFLQQGYLKAP*CSPPVHLWRFAVR---FL*STFFL 267
T++H AGVSPYTS LAET VF KQSP P LC L +S LLIPKL+S+FAEFL +GYL P H RFAVR L +T FL
Sbjct: 47 TFQHWAGVSPYTSPYGLAETYVFGKQSPGPALCGLSSLQTRSPSQAEALLIPKLRSYFAEFLNEGYLDHLRVLTPAHQCRFAVRAPTVLATTLFL 141
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A6A5L776_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L776_LUPAL) HSP 1 Score: 75.1 bits (183), Expect = 6.810e-15 Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 7 TYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKSLLLIPKLQSHFAEFLQQGYLK 195
T++HRAGV PYTSSC+ AE CVF+KQS PP LC L+ + L+PKL+ FAEFLQ LK
Sbjct: 86 TFQHRAGVRPYTSSCDFAEPCVFDKQSLPPGLCHPKILAYIGVTLLPKLRVQFAEFLQHSSLK 148
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A382BNH5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382BNH5_9ZZZZ) HSP 1 Score: 72.0 bits (175), Expect = 9.610e-15 Identity = 38/66 (57.58%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 13 RHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKSLL-----LIPKLQSHFAEFLQQGYLK 195
RHRAGV+PYTSS E AE VFNKQS PP+ C L P+ L L+PKL+ HFAEFL LK
Sbjct: 1 RHRAGVTPYTSSYEFAECYVFNKQSQPPLCCNPFPLQPQGLHVSGAHLLPKLRCHFAEFLHPSCLK 66
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A1V5J5Q1_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium ADurb.BinA012 TaxID=1852815 RepID=A0A1V5J5Q1_9BACT) HSP 1 Score: 72.8 bits (177), Expect = 3.460e-14 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 7 TYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKSLLLIPKLQSHFAEFLQQGYL 192
T++HRAGVSPYTSS +LAETCVF KQS P LC L ++P L+PKL+ +FAEFL L
Sbjct: 81 TFQHRAGVSPYTSSFDLAETCVFAKQSLGPFLCGHLSVAP----LLPKLRGYFAEFLNNASL 138
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A6A5KV19_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KV19_LUPAL) HSP 1 Score: 75.1 bits (183), Expect = 6.640e-14 Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 7 TYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKSLLLIPKLQSHFAEFLQQGYLK 195
T++HRAGV PYTSSC+ AE CVF+KQS PP LC L+ + L+PKL+ FAEFLQ LK
Sbjct: 170 TFQHRAGVRPYTSSCDFAEPCVFDKQSLPPGLCHPKILAYIGVTLLPKLRVQFAEFLQHSSLK 232
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A7R9RWX0_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9RWX0_9CRUS) HSP 1 Score: 68.6 bits (166), Expect = 2.670e-13 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 1 NFTYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRL-KLSPKSLLLIPKLQSHFAEFLQQGYL 192
+ T+RH AGVSP+TSS ELAETCVF KQS + C L + +P L+PKL+ HFAEFL++ YL
Sbjct: 3 SLTFRHWAGVSPHTSSYELAETCVFGKQSLGSLHCDPLLRWAP----LLPKLRGHFAEFLRESYL 63
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A7VSA7_9FIRM (Uncharacterized protein n=1 Tax=[Clostridium] leptum DSM 753 TaxID=428125 RepID=A7VSA7_9FIRM) HSP 1 Score: 67.0 bits (162), Expect = 3.860e-12 Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 7 TYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKSLLLIPKLQSHFAEFL 177
T++HRAGVSPYTSS +LAETCVF KQSP PI C + L PKL+ FAEFL
Sbjct: 47 TFQHRAGVSPYTSSFDLAETCVFAKQSPGPIHCGSIS----GASLFPKLRDQFAEFL 99
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A7S3IBR0_9CILI (Hypothetical protein (Fragment) n=1 Tax=Anophryoides haemophila TaxID=46462 RepID=A0A7S3IBR0_9CILI) HSP 1 Score: 65.1 bits (157), Expect = 1.410e-11 Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 7 TYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQ------RLKLSPKSLLLIPKLQSHFAEFLQQG 186
T++HRAGV PYTSSC+ AE CVF+KQS P LC R PK +PKL+ FAEFL
Sbjct: 53 TFQHRAGVRPYTSSCDFAEPCVFSKQSLSPSLCDHPTPTNRKSRRPKVAPHLPKLRGQFAEFLNHS 118
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Match: A0A077ZLA3_TRITR (Uncharacterized protein n=1 Tax=Trichuris trichiura TaxID=36087 RepID=A0A077ZLA3_TRITR) HSP 1 Score: 63.5 bits (153), Expect = 4.810e-10 Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 7 TYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKSLLLIPKLQSHFAEFL 177
T++HRAGVS YTSS +LA+TCVF KQ PILC + +P L+PKL+ FAEFL
Sbjct: 139 TFQHRAGVSSYTSSFDLAQTCVFGKQLLGPILCGSISGAP----LLPKLRGQFAEFL 191 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9773.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9773.2.1 >prot_A-nodosum_M_contig9773.2.1 ID=prot_A-nodosum_M_contig9773.2.1|Name=mRNA_A-nodosum_M_contig9773.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=68bp NFTYRHRAGVSPYTSSCELAETCVFNKQSPPPILCQRLKLSPKSLLLIPKback to top mRNA from alignment at A-nodosum_M_contig9773:6673..6943+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9773.2.1 ID=mRNA_A-nodosum_M_contig9773.2.1|Name=mRNA_A-nodosum_M_contig9773.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=271bp|location=Sequence derived from alignment at A-nodosum_M_contig9773:6673..6943+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9773:6673..6943+ >mRNA_A-nodosum_M_contig9773.2.1 ID=mRNA_A-nodosum_M_contig9773.2.1|Name=mRNA_A-nodosum_M_contig9773.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=204bp|location=Sequence derived from alignment at A-nodosum_M_contig9773:6673..6943+ (Ascophyllum nodosum dioecious)back to top |