mRNA_A-nodosum_M_contig97.63.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig97.63.2
Unique NamemRNA_A-nodosum_M_contig97.63.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: D7G5S2_ECTSI (Transmembrane protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S2_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 4.140e-86
Identity = 141/224 (62.95%), Postives = 166/224 (74.11%), Query Frame = 2
Query:  518 GFHFFWACCANLLLAGFIRLLVGAPRPFMFDSRLRPLTDRYETSHGFPSLETHMATVVVGWWVESIDARG---------GMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWRLSVHLNSFDLLFRHHVRGTIVVLIIALGFVSYHVENNTSELMGIKKQEYVRVLANIINESGQTQNATFGASERDN--RDSLWGKVSDAPTDGRITSS 1156
            GFHFFWACC N+  A  +RL++ APRPFM+D RLRPLTDRYETSHG PSLETHMATVV GWW ES  + G         G+Q + RLLA+ YI FVGFTRVYACSRFVHQV LS++TGAVGL +GWRLS HL+   L  RHHVRGT+VV+IIALG V+Y VENN S+LMGI+K EY+RVL+NI+ ES Q Q+AT G +E ++      W     AP DGR  SS
Sbjct:   19 GFHFFWACCINMAGAALLRLVLSAPRPFMYDQRLRPLTDRYETSHGLPSLETHMATVVAGWWAESGGSNGSSTDSGGDDGVQPLVRLLALGYIAFVGFTRVYACSRFVHQVALSIVTGAVGLAWGWRLSTHLDGLALTMRHHVRGTVVVVIIALGMVAYQVENNDSQLMGIRKHEYLRVLSNIVKESQQAQSATVGGAESEDGAEGGEWLLHDGAPWDGRAVSS 242          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: A0A7S3XSM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSM3_HETAK)

HSP 1 Score: 156 bits (395), Expect = 7.500e-40
Identity = 92/213 (43.19%), Postives = 120/213 (56.34%), Query Frame = 2
Query:  419 WMQRNLARVVSRQPLRDISVVTWFAFSMGCHQFGFHFFWACCANLLLAGFIRLLVGAPRPFMFDSRLRPL--TDRYETSHGFPSLETHMATVVVGWWVESIDARGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWRLSVHLNSFDLLFRHHVRGTIVVLIIALGFVSYHVENNTSELMGIKKQEYVRVLANIINES 1051
            W Q  + +VVS  P  DIS++TWF+F +   +FGF F W C  NL  A  +R  +G  RPF FD RLR    TD+Y  S+GFPSLETHMA VV G     I    G   +  L   I I FVGFTRVYAC+RF+HQV LS  TGA+GL   +     L ++ + +R H     + L + L  V    E+N    +G+ ++EY RVL  I+  S
Sbjct:   41 WFQPYIDKVVSSNPFADISMLTWFSFIIAVTEFGFPFLWICTGNLFFAQVLRWTLGCRRPFEFDGRLRKAVKTDKYIWSYGFPSLETHMAVVVYG----GIAFYSGKWQLLWLFTPI-IAFVGFTRVYACARFIHQVALSGGTGALGLALAFWAVRSLRAWGVRYRCHYYWAFLALTVVLVVVGLWAESNECSWLGVPREEYRRVLRGILETS 248          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: F0Y7I7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7I7_AURAN)

HSP 1 Score: 106 bits (265), Expect = 9.080e-22
Identity = 83/263 (31.56%), Postives = 119/263 (45.25%), Query Frame = 2
Query:  434 LARVVSRQPLRDISVVTWFAFSMGCHQFGFHFFWACCANLLLAGFIRLLVGAPRPFMFDSRLRPLTDRYETSHGFPSLETHMATVVVGWWVES--IDARGGMQSIARLL----AVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFG----------WRLSVHLNSFDLLFRHHVRGTIVVLIIALGFVSYHVENNTSELMGIKKQEYVRVLANIINESGQTQNATFGASERDNRDSLWGKVSDAPTDGRITSSGRSRQR 1174
            L  V+S+ P RD++ +TW AF  G    G+HF   C  NL      R ++ A RP  +D  L+ L DR   ++G P L THMA VV     E    DARG    I   L    A+  +  V  +R+ A SRFV+QV LS+ TGA+G+             WR   H  + +     HV    ++      +V+++ E+N+S    I   E+ RV+  I N+ G      +    R+ R   +     AP D     S R  QR
Sbjct:   45 LRHVISQNPTRDVTALTWVAFVAGIFYSGYHFTVNCAMNLGFVLLTRAVIAARRPVEYDVHLKQLADRTRGAYGSPDLATHMAVVVFLQLSEKGVDDARGTDYEIFEGLIWGGALALVALVALSRLVAGSRFVYQVALSLATGALGITAARTHVTSKIDPWRDEWHNLANN---AGHVVWLTIIWSCVAAYVAHYAEDNSSHFFSIPNDEFTRVMKGIYNQPGSRG---YAPKRRNKRGQQY-----APPDALSNLSARLSQR 296          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: A0A485LLT1_9STRA (Aste57867_22364 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLT1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.600e-20
Identity = 66/212 (31.13%), Postives = 111/212 (52.36%), Query Frame = 2
Query:  416 PWMQRNLARVVSRQPLRDISVVTWFAFSMGCHQFGFHFFWACCANLLLAGFIRLLVGAPRPFMFDSRLRPLTDRYETSHGFPSLETHMATVVVG--WWVESIDARGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWRLSVHLNSFDLLFRHHVRGTIVVLIIALGFVSYHVENNTSELMGIKKQEYVRVLANIIN 1045
            P + + +  VVSR   +DIS++ W  F       GF + W C  NLL+A  ++  + A RP  +D  L         + GFPS+++HMA VVV   ++++S+     + +   LLA + +  + F+RV+  +RF  Q++ S  TG +GL  G    V +  + +   +H    + V++  L  ++ +VE N S   G+ K E+ RVL +IIN
Sbjct:   48 PGVTQAIHSVVSRYRTQDISLLLWLIFFFLVPDLGFPYVWTCVGNLLVALVLQYAIDAKRPIDYDPDLHVYMCTDPDTRGFPSVDSHMAIVVVAPAFFLDSVS----LLTCLMLLACVGL--IAFSRVFVAARFPSQIVASWATGVLGLCVGDFCHVTMQLYRIPAYYHRVALVCVIVGTLFCIAQYVERNESRSFGLPKAEFTRVLESIIN 253          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: A0A7S3GX49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GX49_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.090e-19
Identity = 63/177 (35.59%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  572 RLLVGAPRPFMFDSRLRPLTDRYETSHGFPSLETHMATVVVGWWVESIDARGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWRLSVHLNSFDLLFRHHVRGTIVVLIIALGFV---SYHVENNTSELMGIKKQEYVRVLANIINESGQTQNATFGASERD 1093
            R L+ A RP  +D RL+PLTD    S+GFPSLE++M+ V++G    S      +      L  I +  +GF+RVY+ SRF HQ++ S + G VGL         +N   +   HH  G + V++I LG +   + ++ENN S L  I ++E++RV++NII+      ++T   S  D
Sbjct:    3 RCLIEAKRPVEYDIRLQPLTDTRADSYGFPSLESYMSVVIMGHLFLSFKNIWLLP-----LGAIVVFVIGFSRVYSRSRFPHQIVGSWLAGFVGLLVSMHCCERMNIHKM--SHHQHG-VCVMVIVLGVLCNFALNLENNESRLAQIPREEFIRVMSNIISGGDNNISSTVDVSTTD 171          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: A0A067CHI3_SAPPC (acidPPc domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHI3_SAPPC)

HSP 1 Score: 92.8 bits (229), Expect = 3.270e-17
Identity = 80/266 (30.08%), Postives = 127/266 (47.74%), Query Frame = 2
Query:  443 VVSRQPLRDISVVTWFAFSMGCHQFGFHFFWACCANLLLAGFIRLLVGAPRPFMFDSRLRPLTDRYETSHGFPSLETHMATVVVG--WWVESIDARGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWRLSVHLNSFDLLFRHHVRGTIVVLIIALGF-VSYHVENNTSELMGIKKQEYVRVLANIINESGQTQNATFGASERDNRDSLWGKVSDAPTDGRITSSGRSRQRLLEEHRDSFYFLHKTIERR 1231
            + SR   +DISVV WF F     + GF + W    N L    ++ ++ A RP  +DSRL         + GFPSL++HMA V+VG  ++V S+        +   +    +  +G+TRV+   RF  QV+ S  TG VG+  G      L +++L   ++ R  +++L+ +  F ++  VE     ++G+ + E+ RVL+ I++  G       GA E D            PT    TS+ R          DSFYFL K++  R
Sbjct:   37 LASRYRTQDISVVLWFIFVFMTPELGFRYVWNVVGNFLAVVALQYVLQAKRPIDYDSRLYLPECTDPDTMGFPSLDSHMAVVIVGPTYFVSSVSP------VTCAIFTACVVLIGWTRVWIGMRFPSQVVASWATGIVGVIIGNLCHYTLVAYELP-AYYNRVCLLLLVASAAFCLATWVERAECRVVGVPRAEFTRVLSRILHGDGSN-----GAPETD---------PSPPT----TSTKR----------DSFYFLMKSMHAR 267          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: A0A1V9ZKU1_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKU1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.460e-16
Identity = 75/264 (28.41%), Postives = 120/264 (45.45%), Query Frame = 2
Query:  443 VVSRQPLRDISVVTWFAFSMGCHQFGFHFFWACCANLLLAGFIRLLVGAPRPFMFDSRLRPLTDRYETSHGFPSLETHMATVVVGWWVESIDARGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWRLSVHLNSFDLLFRHHVRGTIVVLIIALGFVSYHVENNTSELMGIKKQEYVRVLANIINESGQTQNATFGASERDNRDSLWGKVSDAPTDGRITSSGRSRQRLLEEH-RDSFYFLHKTIERR 1231
            + SR    D+SVV WF F     + GF + W+C  N ++   ++ ++ A RP  +D+RL         + GFPSL++HMA V+VG           +  +  ++    I  VG +RV    RF  QV+ S +TGA+G+         +  F L    +    ++V++ AL  V+  VE +   ++G+ K E+ RVL +I++  G                          +DG   S+G  +      H RDSFYFL K +  R
Sbjct:  474 LASRYRTHDVSVVLWFIFLFMTPELGFPYVWSCVGNFVVVLVMQNVIQARRPIDYDARLYLPACTDPDTMGFPSLDSHMAIVIVG----PALVLPSISGVTSMVFAAVILLVGASRVVVGMRFPSQVVASWVTGAIGVGVASFCHAAVRPFQLPAFVNRVVLLLVIVSALFCVAAWVERSECRVVGVPKAEFTRVLGSILHGDG--------------------------SDG---STGAPKPTSASAHKRDSFYFLMKALRSR 704          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: T0RZG9_SAPDV (acidPPc domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RZG9_SAPDV)

HSP 1 Score: 89.4 bits (220), Expect = 5.290e-16
Identity = 73/266 (27.44%), Postives = 127/266 (47.74%), Query Frame = 2
Query:  443 VVSRQPLRDISVVTWFAFSMGCHQFGFHFFWACCANLLLAGFIRLLVGAPRPFMFDSRLRPLTDRYETSHGFPSLETHMATVVVG--WWVESIDARGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWRLSVHLNSFDLLFRHHVRGTIVVLIIALGF-VSYHVENNTSELMGIKKQEYVRVLANIINESGQTQNATFGASERDNRDSLWGKVSDAPTDGRITSSGRSRQRLLEEHRDSFYFLHKTIERR 1231
            + SR   +DIS+V WF F     + GF + W    NL     ++ +V A RP  +D+RL         + GFPSL++HMA V+VG  ++V S+        +   +    +  +G+TRV+   RF  QV+ S  TG VG+  G      L ++++   ++ R  +++LI +  F ++  VE     ++G+ + E+ RVL+ I++  G                        AP   +   + ++++R      DSFYFL K+++ R
Sbjct:   38 LTSRYRTQDISLVLWFIFVAMTPELGFRYVWNVVGNLFAVFALQYVVQAKRPIDYDARLHLPECTDPDTMGFPSLDSHMAIVIVGPTYFVPSVSP------VTSAIFTACVLLIGWTRVWIGMRFPSQVVASWFTGIVGVIVGNLCHYTLLAYEVP-AYYNRVCLLLLIASAAFCLATWVERAECRVVGVPRAEFTRVLSRILHGDGSDG---------------------APVTDQTLLTPQTKKR------DSFYFLMKSMQAR 269          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: W4GKK8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKK8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.750e-12
Identity = 87/293 (29.69%), Postives = 128/293 (43.69%), Query Frame = 2
Query:  443 VVSRQPLRDISVVTWFAFSMGCHQFGFHFFWACCANLLLAGFIRLLVGAPRPFMFDSRL--RPLTDRYETSHGFPSLETHMATVVVGWWVESIDARGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWRLSVHLNSFDLLFRHHVRGT-------IVVLIIALGFV---SYHVENNTSELMGIKKQEYVRVLANIINESGQTQNATFGASERDNRDSLWGKVSDAPTDGRITSSGRSRQRLLEEHRDSFYFLHKTIERRAAEKAAVQRNNSFRGSQF 1285
            +VSR   +DIS++ W  F       G  +F+ C  NL++A  ++  + A RP  +D  L     TD   T  GFPS+++HMA VV+     ++ +         L+AV     + FTRV+   RF  Q++ S  TG VGL       V  N   +   HH           IVV+   +G V   +  VE + S   GI + E+ RVL  I+  SG T +    AS           +S+A     +    RSR        DSFY+L +++  R   + AV      R  QF
Sbjct:   50 LVSRYRTQDISILLWLFFFYLVTDLGIPYFYTCVGNLVVAAALQHSINAKRPIDYDDSLYIHACTDPDTT--GFPSIDSHMAIVVI---TPALTSNSVSALTFSLMAVSGFA-IAFTRVFVGVRFPSQIVGSWGTGLVGL-------VVANFIHVSVLHHAAAAVPPSFHRIVVVCFVVGAVCCVASWVEASDSRNFGIPRHEFTRVLKAIVG-SG-TDDVAVAAS-----------LSEA-----VDQESRSR--------DSFYYLMQSVHSRRRNETAVAPPPQSRMVQF 303          
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Match: A0A6A4Z2K5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2K5_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.130e-8
Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 2
Query:  443 VVSRQPLRDISVVTWFAFSMGCHQFGFH--------FFWACCANLLLAGFIRLLVGAPRPFMFDSRL--RPLTDRYETSHGFPSLETHMATVVVGWWVESIDARGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGL 856
            +VSR   +DIS++ W+     C  F F+        +F+ C  NL++A  ++  + A RP  +D  L     TD   T  GFPS+++HMA VV+   + S           RL+AV     + FTRV+   RF  Q++ S  TG VGL
Sbjct:   55 LVSRYRTQDISILLWYMIDP-CWLFFFYLVTDLGIPYFYTCVGNLVVAAALQHSINAKRPIDYDDSLYIHACTDPDTT--GFPSIDSHMAIVVITPALTSNSVSALTDETTRLMAVSGFA-IAFTRVFVGVRFPSQIVGSWGTGLVGL 198          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig97.63.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G5S2_ECTSI4.140e-8662.95Transmembrane protein, putative n=1 Tax=Ectocarpus... [more]
A0A7S3XSM3_HETAK7.500e-4043.19Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0Y7I7_AURAN9.080e-2231.56Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A485LLT1_9STRA6.600e-2031.13Aste57867_22364 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3GX49_9STRA1.090e-1935.59Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A067CHI3_SAPPC3.270e-1730.08acidPPc domain-containing protein n=1 Tax=Saproleg... [more]
A0A1V9ZKU1_9STRA3.460e-1628.41TFIIS N-terminal domain-containing protein n=1 Tax... [more]
T0RZG9_SAPDV5.290e-1627.44acidPPc domain-containing protein n=1 Tax=Saproleg... [more]
W4GKK8_9STRA4.750e-1229.69Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4Z2K5_9STRA3.130e-833.78Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig97contigA-nodosum_M_contig97:824616..828110 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5S2
PFAMsPAP2
Model size1863
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.09e-90
EggNOG OGs2C31B@1|root,2S2SV@2759|Eukaryota
Cds size990
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig97.63.2prot_A-nodosum_M_contig97.63.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig97 825037..827658 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870494.158659-UTR-A-nodosum_M_contig97:824615..8250361680870494.158659-UTR-A-nodosum_M_contig97:824615..825036Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig97 824616..825036 +
1680870494.310175-UTR-A-nodosum_M_contig97:827658..8281101680870494.310175-UTR-A-nodosum_M_contig97:827658..828110Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig97 827659..828110 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870494.1738756-CDS-A-nodosum_M_contig97:825036..8251331680870494.1738756-CDS-A-nodosum_M_contig97:825036..825133Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 825037..825133 +
1680870494.1874099-CDS-A-nodosum_M_contig97:825457..8257281680870494.1874099-CDS-A-nodosum_M_contig97:825457..825728Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 825458..825728 +
1680870494.2019277-CDS-A-nodosum_M_contig97:826027..8261871680870494.2019277-CDS-A-nodosum_M_contig97:826027..826187Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 826028..826187 +
1680870494.213691-CDS-A-nodosum_M_contig97:826430..8265441680870494.213691-CDS-A-nodosum_M_contig97:826430..826544Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 826431..826544 +
1680870494.2242193-CDS-A-nodosum_M_contig97:826778..8268791680870494.2242193-CDS-A-nodosum_M_contig97:826778..826879Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 826779..826879 +
1680870494.2344873-CDS-A-nodosum_M_contig97:827411..8276581680870494.2344873-CDS-A-nodosum_M_contig97:827411..827658Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 827412..827658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig97.63.2

>prot_A-nodosum_M_contig97.63.2 ID=prot_A-nodosum_M_contig97.63.2|Name=mRNA_A-nodosum_M_contig97.63.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=330bp
MQRNLARVVSRQPLRDISVVTWFAFSMGCHQFGFHFFWACCANLLLAGFI
RLLVGAPRPFMFDSRLRPLTDRYETSHGFPSLETHMATVVVGWWVESIDA
RGGMQSIARLLAVIYICFVGFTRVYACSRFVHQVLLSVITGAVGLFFGWR
LSVHLNSFDLLFRHHVRGTIVVLIIALGFVSYHVENNTSELMGIKKQEYV
RVLANIINESGQTQNATFGASERDNRDSLWGKVSDAPTDGRITSSGRSRQ
RLLEEHRDSFYFLHKTIERRAAEKAAVQRNNSFRGSQFASRGGSFDGEVD
GVGSYGERRGTGRRRYGNSERFSAAVGQA*
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mRNA from alignment at A-nodosum_M_contig97:824616..828110+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig97.63.2 ID=mRNA_A-nodosum_M_contig97.63.2|Name=mRNA_A-nodosum_M_contig97.63.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3495bp|location=Sequence derived from alignment at A-nodosum_M_contig97:824616..828110+ (Ascophyllum nodosum dioecious)
CGTTGCGTACAGCTCAAGAATGGTCGCTTCACGAGTTGTGGCGATCTCTG GTCATATTTGATCTTGCACTTTTGTGGAGGTGAGAGCTATGTATACGGTA AAACAGAATATTCCGCGTCCTCATCGGCGAAGAAATGCGCAAGACCACAA AAATAAGACTCCAGCGGTGGCAGAACCTAGTCCTGCGGTGACATATGAAA CGGTGCACTTTATCGCACATAGATATGTGGTTGCAAAATGGTCCTGTTCA CACAGTGGACGTTTGATAAGGCAACGTCAAAAAGCCTTTCTCTATATAAC AACGATTAATACAGCGTACTTCGTCTAATTGACGACAGAGCACCGCTGCC CGCGCCCTACCGTGAGCTACTCGTATGACAAAAACAGGATCCAAGATAAA GTTCGACGATGGCCTCCTTGGATGCAGCGCAATCTTGCTCGCGTCGTCTC GCGACAACCGCTTAGAGACATCTCCGTGGTTACATGGTTCGCCTTTTCGA TGGGCTGCCATCAATTCGGTGAGTAGAATTCCCGGAAAGTTTCACGTGGT GCAACTCAATGGCTTTATTTAGGCCCTTTCATTTAAGTGCCTAAGGTAGC TAGCATACAGGGCAGTATTGCATTATTTCAAAGTCTGAGTCGGTGGTGGT ACTGGTACGACCGTTGCGCAGCCCTGACAGTTTGTGGCAGCGCCAGAGCT TGACCCCAAAACGTAGGTACCCACGACAGATGCATGAAAGCGAAATTTCG GTTCGAGACCCTGCGGCGCAACAGCGAAACGTCACATAATCCCGACAACC CTCTGTAACGTAAGCTACCAGTGTTGACATGATATTGTTCAGGGTTCCAC TTCTTCTGGGCGTGCTGCGCAAATCTACTCCTTGCTGGCTTCATTCGTCT TCTAGTGGGCGCGCCACGCCCATTCATGTTCGACTCACGTCTGAGGCCCC TAACAGACCGTTACGAAACGAGTCACGGTTTCCCTTCTCTAGAAACCCAC ATGGCGACAGTAGTGGTTGGTTGGTGGGTGGAAAGCATCGATGCACGAGG AGGAATGCAGTCAATTGCGAGACTTCTGGCCGTCATCTACATTTGCTTCG TTGGTTTCACGAGGTAGGTGCTTGACAAGGTTGTCCATAGCAGCGTCAAC ATTACCGTGGTACACCAGTTCATGGGACTCTGACGGCGGCTAAGCCTATG CGACCTGCCGGAAGCGACCAGTGGTCTGTCCTGGCAGGTTTTTCTGTTGG GAAAAGCTCTTACGTGCGAGGTTATCATCAGGGGGGAAAAGGGATGTTCT CGTACGCGACGACAAAAATGGAGTGGTGAGCATCTCCACATTTATAACCC TCTGAGTTGTGTACCCATTGAAAAATATAATTTTCGATAACCGTGGGGCC TCGCTCTTGCAGGGTGTACGCGTGCAGCCGGTTTGTGCACCAGGTGTTGT TGAGCGTTATAACTGGGGCCGTAGGCCTTTTCTTTGGATGGCGGCTTTCG GTCCATCTAAACAGCTTCGATCTCTTGTTTCGGCATCATGTTCGCGGAAC GATTGTGGTGCTCATCATTGCGGTAAGCGATGGCCTTCCAAGGCCTTCCA AGCGTCAGGACAACTGCTTGCTTTTGGGTGACCACCTAACCTTGATGTTA TTCTCGTTTTCCGTTTAGGATTCAGAAGAATTAGTCGCAGCCACTTCCTA GAGTATTTAGGATCAAGTCGTTTGGTCTTTTTCCGACAAAAGCAGAGACG CCGCGATCGAATCATGAACTTGAACCGTTTGGGGCAATGGTCGGACGACA CGTCCCTCGACGCAGCTGGGATTCGTTTCCTACCACGTGGAGAACAACAC TAGCGAGCTCATGGGCATCAAGAAGCAGGAATACGTGAGAGTATTGGCAA ACATAATCAACGAGTCGGGTCAAACGCAGGTGATAAGATTGGCGTCACTA GGTGATCGGTTGCGCAGAAGAGCCAACCCTAAATTATATCGGCGTGGGCA TGAGCGGGGGCATCGCGCATTAGTTGCTGCACGGAATATGCTTCGAAACT ATGACGCAGATCCCCTTTGTTTTGTAATGCGGTGACTTCGACCGAGCGCG CCCCACTTCAACGATCTTGACCATTGACCAAACCACGGTGGTGCGGGGTT GTGAACGACGAAGAACGCGACGTTTGGAGCTTCGGAAAGAGACAATCGCG ATAGCTTGTGGGGAAAAGTGTCCGATGCTCCGACTGACGGCCGGATAACC TCGTCAGGAAGGAGGTCAGACACGCACCGAGGTAGAACTGCCGCGTAGCG CATAGCGTTCAGTCACACTTCCAGGCACATATTGGCATCCGGTTTGCGAG TATAGAGCTTTACAGAATACCTTAATTTCCTGCGTGTGGCTACCCTGGAA AGAACATGTAGTGGTATATCTCGAGGCGATTGCCACCGTAAAGACATCGC TCGCACAGACAATACGCGCCTTGATCGGTGTGCAGTATATTCCGAGTAAA AGCGCTACGCTATGCAAGGGCGACGGCCTAGGGCTCCCGCCTGCTGCGCT TGAGGGAAAAAAACACACACATTTTACAAGGGGTCCACGCGACTACATAT GGAATAACCTACCCGCACACGTCTGACATGAAATTGAACACGCAAATTGC ATACCGGTACGCTCCAGTGAAATTTCTCCCTCTTCGTAAGATATATACTG TACCTTGCATTAAAACGCCTTCAAGCGATAGAACGAAAGCTACCGTGATT TCCCACCAACTTTGATTTCAACCCACAACATGCCCTTGCGTTGCAGCCGG CAACGCCTCCTAGAGGAGCACAGAGATTCTTTTTATTTTCTTCACAAGAC CATCGAGCGCCGCGCCGCTGAGAAGGCGGCCGTCCAACGAAACAACAGCT TTAGGGGCTCACAATTTGCGTCACGCGGCGGCAGCTTCGATGGCGAGGTA GATGGGGTAGGGAGTTATGGAGAGCGACGAGGGACGGGAAGAAGGCGGTA TGGAAACAGTGAACGCTTTTCCGCCGCGGTAGGACAGGCGTAAGGAGCTT CGTTTCAATAGTATCCTCTTCTGTGGTTTCAAAGCCCACGCGAAATGCAG TACAGTAGGGCTACATCGTAGTCTGAATCCACAGATCATTGGAGCTCAAA CTATAGTATCTTATTATCGGAGTTCTCGATATTAACAGTTGAGTATTCGA GACTCCTCCGCAGGTGGATTTTTTTATATTATCACGTCAAAAACTGCAAT GCCAGCGTAAGCGAGCTCATTACATATAGGCATCATACCTGCACAGTATA GTATACACAGCGGGGAAGGAGGACAGATGAGAGGAAGGGTGGGGTTGCTA TTAATACTATTAGTACTATAGTGTACCTTACCGCCTTGCACCTTTTGAAA GGGATTGCACAATGTAGAGTTCTTTACTGCGGATGGGATGGATGACCGTT GGATGACCGTTCAAGTGCTGCAAGCCGCATGATGTCGACTTCGAC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig97:824616..828110+

>mRNA_A-nodosum_M_contig97.63.2 ID=mRNA_A-nodosum_M_contig97.63.2|Name=mRNA_A-nodosum_M_contig97.63.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=990bp|location=Sequence derived from alignment at A-nodosum_M_contig97:824616..828110+ (Ascophyllum nodosum dioecious)
ATGCAGCGCAATCTTGCTCGCGTCGTCTCGCGACAACCGCTTAGAGACAT
CTCCGTGGTTACATGGTTCGCCTTTTCGATGGGCTGCCATCAATTCGGGT
TCCACTTCTTCTGGGCGTGCTGCGCAAATCTACTCCTTGCTGGCTTCATT
CGTCTTCTAGTGGGCGCGCCACGCCCATTCATGTTCGACTCACGTCTGAG
GCCCCTAACAGACCGTTACGAAACGAGTCACGGTTTCCCTTCTCTAGAAA
CCCACATGGCGACAGTAGTGGTTGGTTGGTGGGTGGAAAGCATCGATGCA
CGAGGAGGAATGCAGTCAATTGCGAGACTTCTGGCCGTCATCTACATTTG
CTTCGTTGGTTTCACGAGGGTGTACGCGTGCAGCCGGTTTGTGCACCAGG
TGTTGTTGAGCGTTATAACTGGGGCCGTAGGCCTTTTCTTTGGATGGCGG
CTTTCGGTCCATCTAAACAGCTTCGATCTCTTGTTTCGGCATCATGTTCG
CGGAACGATTGTGGTGCTCATCATTGCGCTGGGATTCGTTTCCTACCACG
TGGAGAACAACACTAGCGAGCTCATGGGCATCAAGAAGCAGGAATACGTG
AGAGTATTGGCAAACATAATCAACGAGTCGGGTCAAACGCAGAACGCGAC
GTTTGGAGCTTCGGAAAGAGACAATCGCGATAGCTTGTGGGGAAAAGTGT
CCGATGCTCCGACTGACGGCCGGATAACCTCGTCAGGAAGGAGCCGGCAA
CGCCTCCTAGAGGAGCACAGAGATTCTTTTTATTTTCTTCACAAGACCAT
CGAGCGCCGCGCCGCTGAGAAGGCGGCCGTCCAACGAAACAACAGCTTTA
GGGGCTCACAATTTGCGTCACGCGGCGGCAGCTTCGATGGCGAGGTAGAT
GGGGTAGGGAGTTATGGAGAGCGACGAGGGACGGGAAGAAGGCGGTATGG
AAACAGTGAACGCTTTTCCGCCGCGGTAGGACAGGCGTAA
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