mRNA_A-nodosum_M_contig96.65.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: D8LFD7_ECTSI (Fructose-2,6-bisphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD7_ECTSI) HSP 1 Score: 272 bits (696), Expect = 1.280e-79 Identity = 148/246 (60.16%), Postives = 178/246 (72.36%), Query Frame = 2
Query: 464 AASSQLLFLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQNVKCVKQAQTN-------------ESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEEGKALNLIVSHGRTLRILILSLTGLGLVNMTNMGKVPNTALYVIEARRSSAGGARSYHLL 1162
A +SQLLFLVRHGETDMN AGRLQGRGV+A LNGAG+ QA LG+F+RNVPFDT+TSSSL RAHETA+ + E N C+K AQ N E + T + C G D QV V++ EG DELSWGELEG+D+ EP+K L ALK+ WD FDRAA GE+++EV+AR+R AVE+ L+ GK LNL+VSHGRTLRIL+LSLTGLG+ MTNMGK+PN Y++E RRS ARSY LL
Sbjct: 158 APTSQLLFLVRHGETDMNKAGRLQGRGVNAPLNGAGLDQAQGLGRFVRNVPFDTVTSSSLLRAHETAMRIAENNEMCLKLAQENDPVPPVPPSTSTKEQEGEKTTPADFCCG-DKAQVRVRRLEGLDELSWGELEGEDSKLEPFKGCLAALKEAWDEGVFDRAAEGGENLVEVQARARAAVETILDRGKELNLVVSHGRTLRILMLSLTGLGMDQMTNMGKIPNCGTYILEVRRSGPAAARSYRLL 402
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: A0A7S2UWM8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWM8_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.190e-31 Identity = 91/240 (37.92%), Postives = 136/240 (56.67%), Query Frame = 2
Query: 452 PGSTAASSQLLFLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDT----LTSSSLRRAHETA-------------VIVVEQNVKCVKQAQT-NESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEEGKALNLIVSHGRTLRILILSLTGLGLVNMTNMGKVPNTALYVIE 1117
P ++ QL++LVRHG+TDMN G LQGRGV+A LN G QA GKFL ++ L SS+L RA +TA V ++ ++VK A +E S + +Q+P YE F+ELSWG +EG+ +EP++ L+ +K WD+ + D + GES ++V RS +A+++ L +G N+IVSHGRT+R+++ SL G + KVPNTA+Y+I+
Sbjct: 76 PNISSKPGQLIYLVRHGQTDMNKRGCLQGRGVNADLNVHGQFQAMTAGKFLSSLGSTDQDVFLCSSTLSRAKQTAQAISTFLPTSRDEVAIMRKSVKNALSAYGGSEVQSAPVSSYPSSPTSSDEQIP--SYEDFEELSWGIMEGKSWKEEPYRTMLQEVKKQWDSGNLDASILGGESQLQVRKRSLQALDTVLSKGHKHNIIVSHGRTIRVMLNSLIG------KTLEKVPNTAIYIIQ 307
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: A0A7S3Y0U4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0U4_HETAK) HSP 1 Score: 132 bits (332), Expect = 1.440e-30 Identity = 87/221 (39.37%), Postives = 116/221 (52.49%), Query Frame = 2
Query: 470 SSQLLFLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQN-VKCVKQAQTNESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEEGKAL-------NLIVSHGRTLRILILSLTGLGLVNMTNMGKVPNTALY 1108
S +F+ RHG+TDMNA G LQGRGV+A LN G Q LG FL+N FDT++ S+L R++ETA +++ N C K P+ +Y +ELSWGELEGQ A +EPW+ K + W D A NGES EV AR+R A+E+ + + +L+VSHGRT+R L+ L G+ M VPN LY
Sbjct: 85 SRHYVFIARHGQTDMNAGGFLQGRGVNANLNDIGREQGRALGDFLKNTKFDTISCSTLIRSYETAEEILKMNNFMC-------------------------KATPIAQYVDLEELSWGELEGQCAREEPWRSKFKHTVQMWREGKNDYKAVNGESPNEVAARARGALEAIVAQXXXXXXXXXXRHLVVSHGRTIRSLLDGLAGV------RMESVPNCGLY 274
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: A0A1T5GB29_9SPHI (Probable phosphoglycerate mutase n=2 Tax=Sphingobacterium TaxID=28453 RepID=A0A1T5GB29_9SPHI) HSP 1 Score: 108 bits (270), Expect = 3.660e-23 Identity = 71/217 (32.72%), Postives = 110/217 (50.69%), Query Frame = 2
Query: 485 FLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQNVKCVKQAQTNESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEEGKALNLIVS-HGRTLRILILSLTGLGLVNMTNMGKVPNTALYVIEARRSS 1132
+ +RHG+TD+N G +QGRGVD+ LN G++QA K ++VPFD + +S+L R H+T + +N + V++ EG DE+SWG EGQ+ E + + L D W D NGES E+ R +KA+ L + K +++V HGR LRI++ LT + + M + NTALY+++ R +
Sbjct: 6 YFIRHGQTDLNLKGIVQGRGVDSPLNENGLKQAAAFYKAYKDVPFDKIYTSTLLRTHQTVEPFLTKN------------------------------ISVEQLEGLDEISWGIYEGQEQ-DETIMKGFQELVDSWRNNELDARVENGESPNELVERQKKAIAYMLSKEKEEHVLVCMHGRALRIMLCHLTDVPVSQMDDFPHT-NTALYILDYDRGA 190
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: A0A6N8KX41_9SPHI (Histidine phosphatase family protein n=1 Tax=Sphingobacterium humi TaxID=1796905 RepID=A0A6N8KX41_9SPHI) HSP 1 Score: 108 bits (270), Expect = 4.050e-23 Identity = 71/213 (33.33%), Postives = 108/213 (50.70%), Query Frame = 2
Query: 482 LFLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQNVKCVKQAQTNESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEEGKALNLIVS-HGRTLRILILSLTGLGLVNMTNMGKVPNTALYVIE 1117
++ +RHG+TD+N G +QGRGV++ LN G +QA ++VPFD + +S+L R H+T +EQ +P ++ EG DE+SWG EGQ+ +E E + W D A NGES + AR +KA+E L+ + ++V HGR LRI++ LT + + NM + NTALY++E
Sbjct: 5 IYFIRHGQTDLNLKGIVQGRGVNSPLNENGFQQAQAFYDAYKDVPFDKVYTSTLLRTHQTVAPFIEQG------------------------------IPTEELEGLDEISWGIYEGQEQTKEILDG-FELVVGSWRNNELDLAIENGESPNTLVARQKKAIEHILKNKEEETVLVCMHGRALRIMLCHLTKVPVCNMDDFPHT-NTALYILE 185
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: UPI00048273A8 (histidine phosphatase family protein n=1 Tax=Olivibacter sitiensis TaxID=376470 RepID=UPI00048273A8) HSP 1 Score: 104 bits (259), Expect = 1.250e-21 Identity = 68/217 (31.34%), Postives = 112/217 (51.61%), Query Frame = 2
Query: 476 QLLFLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQNVKCVKQAQTNESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEEGKALN--LIVSHGRTLRILILSLTGLGLVNMTNMGKVP--NTALYVI 1114
++L+++RHGETD+N G +QGRGV++ LN G++QA +F ++VPF+ L +S+L R H+T ++ +P ++ EG DE+SWG EG++ +E L AL GW D NGE+ +V+ R +A++ L + L+ HGR +R+L+ L G ++++ M + P NTALY +
Sbjct: 3 KILYIIRHGETDLNKKGIVQGRGVNSPLNETGLKQAELFYEFYKSVPFEKLFTSTLLRTHQTVDGFIQSG------------------------------IPWEQLEGLDEISWGIYEGKEQTEEVLSGFL-ALTQGWCNGELDSCVENGETPNQVKKRQEQAIDYILNTMSTHSKVLVCMHGRAIRLLLCLLLG---IDLSRMDEFPHTNTALYKV 185
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: A0A6M1E8M1_9SPHI (Histidine phosphatase family protein n=1 Tax=Parapedobacter sp. SGR-10 TaxID=2710879 RepID=A0A6M1E8M1_9SPHI) HSP 1 Score: 103 bits (258), Expect = 1.430e-21 Identity = 68/212 (32.08%), Postives = 105/212 (49.53%), Query Frame = 2
Query: 485 FLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQNVKCVKQAQTNESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEE-GKALNLIVSHGRTLRILILSLTGLGLVNMTNMGKVPNTALYVIE 1117
+ +RHG+TD+N G +QGRGV+ LN G++QA + +N+PFD + +S+L R H+T V+ +P ++ EG DE+SWG EG++ E + E + W D NGES E+ AR ++A+ L++ + L+ HGR LRIL+ LT + + M + NTALYV+E
Sbjct: 6 YFIRHGQTDLNLKGIVQGRGVNTPLNTNGLKQAKAFFEHYKNIPFDKIYTSTLLRTHQTVAPFVQLG------------------------------IPYEELEGLDEISWGIYEGKEQ-NESIMKGFETVIGRWRNNDLDHCIENGESPNELVARQKEAITHMLQQKDEETVLVCMHGRALRILLCHLTDIPVCQMDDFPHT-NTALYVLE 185
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: UPI0003B6969E (histidine phosphatase family protein n=1 Tax=Salisaeta longa TaxID=503170 RepID=UPI0003B6969E) HSP 1 Score: 103 bits (257), Expect = 2.560e-21 Identity = 76/216 (35.19%), Postives = 109/216 (50.46%), Query Frame = 2
Query: 482 LFLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQNVKCVKQAQTNESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEE--GKALNLIVSHGRTLRILILSLTGLGLVNMTNMGKVPNTALYVIEAR 1123
L+LVRHGET+ N G +QGRG+DA LN G QA LG+ V FD S LRR +TA +V ++ + +P + +E++WG EG+ A + + A+K+ W A D GES +VEAR+++AV LE G+ + L+V+HGR LR+L+ S+ GL NM MG NT + +E R
Sbjct: 14 LYLVRHGETEYNRQGIVQGRGIDADLNATGRAQAKALGERFATVDFDVAYVSPLRRTRQTARLVTARH----------------------------RPLPTIYLKDLEEMAWGVYEGEPPAPDR-DAAMNAIKEQWRAGTVDLPIEGGESPRDVEARAQRAVHHMLEASAGRTI-LVVTHGRYLRVLLASVLERGLHNMHEMGHA-NTCVNHLEYR 198
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: A0A5D8YPS1_9SPHI (Histidine phosphatase family protein n=1 Tax=Pedobacter sp. BS3 TaxID=2567937 RepID=A0A5D8YPS1_9SPHI) HSP 1 Score: 102 bits (255), Expect = 5.470e-21 Identity = 71/218 (32.57%), Postives = 111/218 (50.92%), Query Frame = 2
Query: 482 LFLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQNVKCVKQAQTNESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQE---PWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLEEGKALNLIVS-HGRTLRILILSLTGLGLVNMTNMGKVP--NTALYVIE 1117
L+++RHGETD+N G +QGRGVD LN G +QA + +++PFD + +S+L+R H+T ++ +P +Y G DEL+WG EGQ++ ++ +K +E+ + G FD +GES +EV+ R +E +E+ N+++ HGR LR+ + LT L NM K P NTALY +E
Sbjct: 18 LYIIRHGETDLNKHGIVQGRGVDTDLNETGRKQADAFFRAYKHIPFDHIYTSTLKRTHQTVQQFIDSG------------------------------IPWTQYAGLDELAWGVYEGQESTEDIRQAFKNMIESWQQGDLHLKFD----SGESPLEVKERQLTVLEKLIEKNDHKNILICMHGRALRLFLCLLTNQPLYNME---KFPHQNTALYRLE 198
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Match: A0A179DFE6_9SPHI (Phosphoglycerate mutase n=1 Tax=Pedobacter psychrophilus TaxID=1826909 RepID=A0A179DFE6_9SPHI) HSP 1 Score: 101 bits (252), Expect = 9.750e-21 Identity = 70/213 (32.86%), Postives = 103/213 (48.36%), Query Frame = 2
Query: 482 LFLVRHGETDMNAAGRLQGRGVDAVLNGAGIRQATELGKFLRNVPFDTLTSSSLRRAHETAVIVVEQNVKCVKQAQTNESSSDSTRRIENCGGGDGKQVPVKKYEGFDELSWGELEGQDAAQEPWKRKLEALKDGWDAKHFDRAARNGESVIEVEARSRKAVESCLE-EGKALNLIVSHGRTLRILILSLTGLGLVNMTNMGKVPNTALYVIE 1117
L+++RHGETD N G +QGRGV++ LN GI Q + ++VPFD L S L R +T +E K +PV+++ G DEL+WG+ EGQ + E + + L W ++D GES EV R KA+E + + + + LI HGR +R+L+ L L M N NT+LYV++
Sbjct: 8 LYIIRHGETDFNKNGIVQGRGVNSQLNATGIAQGEAFYEMYKDVPFDKLYVSKLVRTGQTVSKFIE------------------------------KGLPVERFSGLDELAWGKYEGQKSTPE-LREDFKKLIQNWAQGNYDVKTEGGESPNEVFTRQTKAMEEIMSHKDEKVILICMHGRAMRLLLCQLMNQSLDKMDNYPH-QNTSLYVLD 188 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.65.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig96.65.1 >prot_A-nodosum_M_contig96.65.1 ID=prot_A-nodosum_M_contig96.65.1|Name=mRNA_A-nodosum_M_contig96.65.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=260bp MASHASTVEEPGMVTMGSPGSTAASSQLLFLVRHGETDMNAAGRLQGRGVback to top mRNA from alignment at A-nodosum_M_contig96:674171..677688- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig96.65.1 ID=mRNA_A-nodosum_M_contig96.65.1|Name=mRNA_A-nodosum_M_contig96.65.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3518bp|location=Sequence derived from alignment at A-nodosum_M_contig96:674171..677688- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig96:674171..677688- >mRNA_A-nodosum_M_contig96.65.1 ID=mRNA_A-nodosum_M_contig96.65.1|Name=mRNA_A-nodosum_M_contig96.65.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=780bp|location=Sequence derived from alignment at A-nodosum_M_contig96:674171..677688- (Ascophyllum nodosum dioecious)back to top |