mRNA_A-nodosum_M_contig958.35.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig958.35.2
Unique NamemRNA_A-nodosum_M_contig958.35.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: D7FWI2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWI2_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 6.510e-112
Identity = 269/465 (57.85%), Postives = 310/465 (66.67%), Query Frame = 3 
Query:  309 EASSDELVATIQGHDRFFSLMLDMIPESLVLPAKQVSEPSYASKYMKNKKDDAPQQSKKEESKKNKRARYAADNQKTVSERQQERAREKTQDGNDGEHGGEHED---------GSGAEVEEDGLEPEAIRDKTMDVTSMDALKRKIQDRISAMQQKRMAAEGGRRAKTSEKRSAEXXXXXXXXXXXXXXXXXXXXEGEKKHPSIAVASATGPEPRGAPRDSSRNSSKEPKAAGTHVSGPRAKPEAL---RPVAEPQLPPLPTIEDVGDIEFSGLRGVIGRSDGEKRRP--PKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXXXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINKEK-TRGGVMKNGGGRGXXXRGSGAG 1658
            E+  DELVATIQ HD FFS MLDMIPE+LVL AK+V+E SYASKYMKNKK +AP+QSKKEESKKNKRARYAADNQKT+ E+QQERA+   +DG D + G + +          G  A  E+DGL+ E +R K+MDV SMDALK++I++RI   Q+KR AAEG RRAKT+      XXXXXXXXXXXXXXXXXXXX                              S E            AK EA     PVA+PQLPPLPT+EDVGDIEFSGLRGV+G   G + +   PKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT+ GKE A++EGW DAIR+AGG E+KDNP ALKKMIKRKE+EKAKSA  WD R++GQ+K     XXXX         G          A  GDA    G KR+RRAGFEGKK DFINKE+ ++ G    GGGRG    G G G
Sbjct:  111 ESVEDELVATIQEHDEFFSRMLDMIPENLVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKA-GEDGGDADAGSDKDXXXXXXXXXGGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXSAEAXXXXXXXXXXGAKVEANGSHAPVAKPQLPPLPTVEDVGDIEFSGLRGVLGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTETGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDERLSGQRKXXXXXXXXXEENLNRRKKGGPAVGETDKAASGGDAASGQGGKRQRRAGFEGKKQDFINKERPSKAGEQGGGGGRGGARGGRGRG 562
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BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A7S0SRE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRE0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 8.220e-13
Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 3 
Query: 1050 LPTIEDVGDIEFSG--LRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT-KEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRI 1394
            L +  D  DIE +   +   +   D  K+ P   G PGSK KRLH +LA  E+K+QRL  L+Q+  EGKE  +QE WE AI+ A GE V  +P  +K  +K+ E+ KAKSA  W+ R+
Sbjct:  193 LDSTTDSTDIETAATDISYNLATGDSTKKLPKDFGKPGSKSKRLHSMLAEVEKKRQRLQDLKQSGPEGKEKLQQELWEGAIKSASGERVITDPKVIKNKLKKIEKNKAKSAKEWNARL 310
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BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A1Z5JT82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT82_FISSO)

HSP 1 Score: 73.6 bits (179), Expect = 3.460e-10
Identity = 60/181 (33.15%), Postives = 89/181 (49.17%), Query Frame = 3 
Query: 1062 EDVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXXXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINKEKTRG 1601
            ED+  ++F  L G+            K     SK K L  +LA AE K+Q+L  L++ T+E K  A +  W D ++ A G+ VK +P  +KK++KRK  +KAKS   W  R+   K+++ +R             G       +      D  + +G KR  RAGFEGKK DF+N  K +G
Sbjct:  191 EDLAKLDFGRLAGLNTTETSNYLAANKALGNLSKTKNLKKMLADAEAKQQKLEQLKKGTEEEKAKAMEMQWSDTLKEADGQRVKSDPSKIKKVLKRKAAKKAKSQKAWKTRLEQVKEKKDERQTIRNHNLDARKKGGAIGANLSKKKIVKDGDQDSG-KRLSRAGFEGKKRDFLNSPKKKG 370
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BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A448ZTA8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTA8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.680e-9
Identity = 62/180 (34.44%), Postives = 89/180 (49.44%), Query Frame = 3 
Query: 1065 DVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT--KEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXXXXXXXATGAGRGDATESAGEK----RRRRAGFEGKKNDFINK 1586
            D+  ++F  L G+    +G      K     SK K L  +LA AE KK+RL  L+Q+  +E KE A    W D +R A GE VKD+P  +KK +KR+  +K KS+  W  R+   + +  +R             G       ++     +A E+ G+K    R  RAGFEGKK DF+NK
Sbjct:  172 DLAMVDFGRLSGLNPVGNGNYTEVNKALKNLSKSKNLEKMLADAESKKKRLEELKQSDKQEDKEKAASIEWGDTLREATGERVKDDPAKIKKALKRRAAKKLKSSKAWKTRMESAQSKMDERQKIRNHNLTKRKLGGSAGANLSSKRIETEA-EADGKKKTGRRLSRAGFEGKKQDFLNK 350
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BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: B5Y420_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y420_PHATC)

HSP 1 Score: 71.2 bits (173), Expect = 2.440e-9
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 3 
Query: 1065 DVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKE--GKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRI-----AGQKKEQGKRXXXXXXXXXXXXXGXXXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINK 1586
            D+ +++F  L G+   +     +  K  A  SK K L  +LA AE K++R+  L+  K+   +  ARQ  W+D ++ A G+ VKD+P  LKK +KRKE +KAKS   W  R+     A Q +++ ++                     A      DA E  G +R  RAGFEG+K DF+NK
Sbjct:  218 DLANLDFGRLAGLNSHTKEHYSKSNKALANLSKTKNLERMLADAEAKRERIEALKACKDESAQAEARQILWKDTLQEADGQRVKDDPMKLKKALKRKEVKKAKSKKAWKSRMENVSDAAQSRQKIRQHNLSARKAGGQSGANLSKKKIA------DAGEDGG-RRLSRAGFEGRKQDFLNK 391
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BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A1E7FHH0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHH0_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.320e-9
Identity = 66/190 (34.74%), Postives = 89/190 (46.84%), Query Frame = 3 
Query: 1065 DVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT--KEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXXXXXXXATGAG-------------RGDATESAGEKRR-RRAGFEGKKNDFINK 1586
            D+  ++F  L G+    +G      K     SK K L  LLA AE KKQRL  L+++   E KE A    W + I+ A GE VKD+P  +KK+++RK  +K KSA  W +R+   K+   +R             G        TGA               G  T+   + RR  RAGFEGKK DF+NK
Sbjct:  226 DLSQVDFGRLAGLNPIGNGNYTEVNKALKNLSKSKNLEKLLADAESKKQRLEELKKSGKAEDKEKADNIVWGNVIKEATGERVKDDPAKIKKVLQRKAAKKKKSAKAWKNRMDTTKQNMDERQNIRNHNLNQRKAGGQ------TGANLSSKRIELEGDDKNGGPTKQKNDGRRLSRAGFEGKKQDFLNK 409
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BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: K8YSR8_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSR8_NANGC)

HSP 1 Score: 69.7 bits (169), Expect = 1.040e-8
Identity = 56/144 (38.89%), Postives = 77/144 (53.47%), Query Frame = 3 
Query: 1167 KRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIA----GQKKEQGKRXXXXXXXXXXXXXGXXXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINK 1586
            K L GLL  AEEK++RL  L+ T+ GKE A    W+DA++ A GE++ DNP  LKK IK+KE+    S   W  R A     ++++QG+R             G       A      D  E +G  R+ RAGFEGK+ +F+NK
Sbjct:  328 KNLVGLLKKAEEKEKRLKELQATEGGKEEASALLWKDALKSAHGEKILDNPKLLKKAIKKKEKAXXXSKEKWGDRTAKIEAAEREKQGRREANLKKRKLGGVEGCL-----AGSKAEKDNKEKSGG-RQGRAGFEGKRAEFLNK 465
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BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A7S4ATI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATI7_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.170e-8
Identity = 60/181 (33.15%), Postives = 87/181 (48.07%), Query Frame = 3 
Query: 1065 DVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKE--GKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXXXXXXXATGA----GRGDATESAGEKRRRRAGFEGKKNDFINKE 1589
            D+  ++F  L G+    +G      K     SK K L  +LA AE KK+RL  L+++ +   KE A    W  A++ A GE VKD+P  +KK +KRK  +K KS+  W  RI   + +  +R             G       ++        GD  +  G +R  RAGFEGKK DF+NK+
Sbjct:  264 DLAQVDFGRLAGLNPVGNGNYTEVNKALKNLSKSKNLEKMLADAESKKKRLEELKKSDKQTDKEKAANIEWGHALKEATGERVKDDPAKIKKALKRKAAKKLKSSKAWKTRIESTQSKMDERQKIRNHNLSKRKVGGSAGANLSSKRIEVEKEGDDKKKGG-RRLSRAGFEGKKQDFLNKK 443
[Close]
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A7S3KW68_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW68_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.500e-7
Identity = 59/178 (33.15%), Postives = 85/178 (47.75%), Query Frame = 3 
Query: 1065 DVGDIEFSGLRGVIGRS-DGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXXXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINKEK 1592
            D+  ++F  L G+ G S      +  K     SK K LH +LA AE K+ +L  L+Q  +E    A++  W D  + A G+ +KD+P  LKK++KRK  +K KS   W  R A   K+   R             G       +    R D  E  G +R  RAGFEG+K +F+N +K
Sbjct:  192 DLAQVDFGRLAGLNGSSLQKNYEQSNKALQNLSKSKNLHKMLADAEAKRAKLEELKQGDEEAVAKAQKLLWSDTFKEADGQRIKDDPSKLKKVLKRKAAKKVKSQKAWQSRTAQVDKKAQDRQKIRQHNLQARKQGGAAGANLSKKEIRKD--EDPG-RRLSRAGFEGRKREFLNGDK 366
[Close]
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: R1GNS5_BOTPV (Putative 60s ribosome biogenesis protein rrp14 protein n=1 Tax=Botryosphaeria parva (strain UCR-NP2) TaxID=1287680 RepID=R1GNS5_BOTPV)

HSP 1 Score: 64.3 bits (155), Expect = 5.410e-7
Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 3 
Query: 1185 LAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKK 1409
            L AAE+KKQRLAGL + K  +E+  ++ W +A + A GE+VKD+   LKK +KRKE++K KS N W  RIAG +K
Sbjct:  399 LEAAEKKKQRLAGLDEEKR-REIESKDLWLNAKKRAHGEKVKDDTNLLKKTLKRKEKQKKKSENEWTERIAGVQK 472
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FWI2_ECTSI6.510e-11257.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0SRE0_9STRA8.220e-1343.22Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A1Z5JT82_FISSO3.460e-1033.15Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A448ZTA8_9STRA1.680e-934.44Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B5Y420_PHATC2.440e-933.70Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1E7FHH0_9STRA4.320e-934.74Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
K8YSR8_NANGC1.040e-838.89Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4ATI7_9STRA1.170e-833.15Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3KW68_9STRA4.500e-733.15Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
R1GNS5_BOTPV5.410e-752.00Putative 60s ribosome biogenesis protein rrp14 pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig958contigA-nodosum_M_contig958:271990..280005 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWI2
Preferred nameSURF6
PFAMsRRP14,SURF6
Model size2227
Max annot lvl2759|Eukaryota
KEGG koko:K10848
KEGG Pathwayko03420,ko03460,map03420,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0001652,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044452,GO:0044464,GO:0065003,GO:0070013,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1990904
Exons7
Evalue4.12e-106
EggNOG OGsKOG2885@1|root,KOG2885@2759|Eukaryota
Ec32 ortholog descriptionRibosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain
Ec32 orthologEc-26_006520.1
Descriptionribosomal large subunit biogenesis
Cds size1338
COG categoryS
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig958.35.2prot_A-nodosum_M_contig958.35.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig958 272511..279637 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870464.4926164-UTR-A-nodosum_M_contig958:271989..2725101680870464.4926164-UTR-A-nodosum_M_contig958:271989..272510Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig958 271990..272510 -
1680870464.5897117-UTR-A-nodosum_M_contig958:279637..2800051680870464.5897117-UTR-A-nodosum_M_contig958:279637..280005Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig958 279638..280005 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870464.5070305-CDS-A-nodosum_M_contig958:272510..2726811680870464.5070305-CDS-A-nodosum_M_contig958:272510..272681Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig958 272511..272681 -
1680870464.5171623-CDS-A-nodosum_M_contig958:273206..2736591680870464.5171623-CDS-A-nodosum_M_contig958:273206..273659Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig958 273207..273659 -
1680870464.531541-CDS-A-nodosum_M_contig958:273956..2741081680870464.531541-CDS-A-nodosum_M_contig958:273956..274108Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig958 273957..274108 -
1680870464.5457985-CDS-A-nodosum_M_contig958:274423..2746311680870464.5457985-CDS-A-nodosum_M_contig958:274423..274631Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig958 274424..274631 -
1680870464.557077-CDS-A-nodosum_M_contig958:275658..2758231680870464.557077-CDS-A-nodosum_M_contig958:275658..275823Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig958 275659..275823 -
1680870464.5680377-CDS-A-nodosum_M_contig958:278219..2783271680870464.5680377-CDS-A-nodosum_M_contig958:278219..278327Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig958 278220..278327 -
1680870464.578668-CDS-A-nodosum_M_contig958:279556..2796371680870464.578668-CDS-A-nodosum_M_contig958:279556..279637Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig958 279557..279637 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig958.35.2

>prot_A-nodosum_M_contig958.35.2 ID=prot_A-nodosum_M_contig958.35.2|Name=mRNA_A-nodosum_M_contig958.35.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=446bp
MLDMIPESLVLPAKQVSEPSYASKYMKNKKDDAPQQSKKEESKKNKRARY
AADNQKTVSERQQERAREKTQDGNDGEHGGEHEDGSGAEVEEDGLEPEAI
RDKTMDVTSMDALKRKIQDRISAMQQKRMAAEGGRRAKTSEKRSAERLVK
RESKRKGAKARKKGKDEGEKKHPSIAVASATGPEPRGAPRDSSRNSSKEP
KAAGTHVSGPRAKPEALRPVAEPQLPPLPTIEDVGDIEFSGLRGVIGRSD
GEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEG
WEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQG
KRQEKREENLKKRKMGGVAAATTATGAGRGDATESAGEKRRRRAGFEGKK
NDFINKEKTRGGVMKNGGGRGGGGRGSGAGKPMGGRGAVRDKAKG*
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mRNA from alignment at A-nodosum_M_contig958:271990..280005-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig958.35.2 ID=mRNA_A-nodosum_M_contig958.35.2|Name=mRNA_A-nodosum_M_contig958.35.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8016bp|location=Sequence derived from alignment at A-nodosum_M_contig958:271990..280005- (Ascophyllum nodosum dioecious)
CCAATGGAGGTGTTCACGAACCTCGGAAAAAAACGGAGACAAGCCCGTCT
CCAAAATCAAGCAAGCCACCTAATATTGCTATTGTACAGGTAGCAACATC
AAAACTGGATAGATCCAAGGATTCCGGCCAAGAGCTGAATAATACGACGC
ATCACCACAAGCATGGGGGTGAGAACGGTGCAAGGGGTGCTACTCAACCG
AGAGGACAGGTTGCAAAGGACCGGACAAAGAAACGGGCCAGAAGTCACAC
GGAAGAGATCGAGGAAGTGGTGGAGGGCGTGGAGTGGGGCCAGGACGAAC
TAGCCCTTGAGGCATCATCGGACGAGCTAGTGGCCACGATTCAAGGGCAT
GACCGCTTCTTTTCGCTGATGCTAGACATGATTCCTGAGAGCCTTGTGTT
GCCGGCGAAACAGGTGTCGGAGCCTTCCTACGCCAGCAAGTACATGAAGG
TAACAGACGGCGTTCAATGTTTTCGGCGTCTTTCTAGGCTTACCGTAGTC
CTGGTGTAGTGAAGTACAACAGTAACAAATACTGCTGTCTGTTATATAGC
ACCCCTGTTACCAAAGGACGAGTGTGTACGATGATTAAGTAGTAAATGTA
CAGTATAACGGTGGACTTCTCCCCGACATTATACTGTTGACCCAATGTTA
TCTGCATGGGGGAACCTGTTTAAATGCCATGAAGAGGTTTTGTATGTGCA
GCCTTTGATCCCACCTAAACGTTTTGACATTTTTTCCCCCATAACCGGGG
GATGCTCAGAAGGTCTAGGTGTGCTCTGATGTCGTTCTGTGGAGAGGAGA
AACCGCAAAAATAAAACGCCGTACCTTAAATCAGCGATTTTACTGTATGT
AGATAAAACTGTTCGCACGAGCACTCGTAGTAACGCGAGAGGAATCCTGT
GAGTAAGCACCAGATTCAACCTGGGGGTGGATAAAGAGCAGGCTGACGCG
GGACGGGACGCCCCGAACCTGTCTCATGAGACCAAATCATCGGGCGCGAA
CGGGGACAGGAAAATGTCCATTTTCCCTGTTCAGCTGATCACTCTAGCTG
AAATTGGTTACAATACATACGGGCTGCCTGGACAAGCGAAGCTCCCTGAC
GACGTACCCAACCCCGTCTACAGTATGTATGTATGGTCATTATGTAGCAA
GTATGGATCAACCGGGTAAGGTTGCCAATCTTGCTCATGGTCAGCTGAAC
AGGGAAAATGCATGTTTCCCTGTCCCCGTTCGCGCCTGAGAATCTGGTCT
CGCGAGACGGGTTTGGCCGTCCCGTCCCGCGTCAGCCTGCTCCCTCTCCA
CACAGCCTAAAAGGGATGATAGACTCCCATACAAACTCGTTTGTAATAGC
TGAAGAGTACGAAACAGTTGACGAGTTTTGTCTTTGCGTTTCCCCCCCGT
CATGTAGGACAGGAAACCCCGCGGATCCCACACCTAAAAAACACTAGAAC
CGATACCATGAGCCGCGCTGTACCTCACGATCTAGCCTCCTTGCATTACG
ATACTATTAATATAACGATACTATGTATGAATAAGGCACTTCGGACAATC
TGTACACTGCTGTTTTCATCACACGACATCGCGCGGACCGCTTGGTTGGT
CGGGTCATAGCTCTTTCGTCGACGCTGGTCGTATCATCTGCTCCCCCGTA
CCCATCCCATCCCATATCCATCCCACAGAACAAAAAGGACGATGCGCCTC
AGCAGTCCAAGAAGGAAGAGTCGAAGAAAAATAAGCGTGCGCGATACGCC
GCGGACAACCAGAAGACTGTCTCAGAAAGGCAGCAGGTACGTTTTTCCTG
TTCAGTTGACCAAGAAGCAGGATTTAGTGGGGTGGGTTAGTGAAAGCTCC
TCCAAGAAGGGGGGTGGTGACCATTGTGCACACATGATATGATATAACAG
ACACAGCCACGTTGGGAGGTGGACCGTCTTATTAATATTAAGATAGGTTA
GCTATCGCTATACGCTCGCTAAAGGATAGATGTGTAACCATCGTCAGCTT
AACACAGGTGCTGGTGTAATGTGTGGTTGGTGTTTGGCTTATTGTACTGG
CGTCGTCCTCAACACCGTACGGGAAAGTGCCACGCCTGATTCTAAAGAAA
ACAAGCAGGCTGACGCAGGCAGTCGTCGTTTCCGAAGGCCTTTTCTGTGC
GGCGCGTTGTTGTGTATTTTTTCATCTACAGAGCATGAAGGTCTATCTAC
ACATGTCCAACGGGAATGTTGAGCGGAACCTTTAATGCGCAGCATTCTGT
CACTAAGAATCTTCACATCTCGCCTCGGTTCTGGCCTACGATTTTTTATC
AAGATGCAAATTCAGTACTCCTACTAGCACACTTTTGTGCAGCAGTATTA
TTAGGCTCTATCCGCAAAACCCTGTGTTTAAAATTGTTCATGATAAGAGC
GTAAAGGTCTATCTACCTATGTATAACGGGAATGTTCAGCAGAAACCTCT
ATGCATAGAATCCTGTGTCACTAAGAAAGTTTCCATGTCTCCCCTGTTCT
CGTCAACGATTTTTGATACCGATGCAAATTCAGTGCTCTTACGAGCACAC
CTTTGTGCAGCAGTAGACTCTATGCGCAGAAGAAGCATTTTTCGCAGGAG
CAGGTCGATAATAGCGTCCTCCTGCATACCGTTTCCGACGACCGATCTAA
GGAAAGATTCGGTGTCTTCGTCCCCTCCATACGCACCGTCCTGTTGAGGT
CCAGTATCCCGTTCAGAATCTAGGTCATCATCCCAACTTGTCTCTTTATA
CCTCGCATTTTCCTGCGCTGCGAGTTGTGCTGCAGCCCGTCTGCGCTCAC
GGTTTGCTGTGAAGCATGGTACATTCGAAGAGCAGGCTAGTATCGGCGGC
TTGTACCGTGTGCACAACAGTATCATATACTCTAATACCTAGGAGTGGTT
GTGTAGAACGTAAAGTAGAGTAAAGTACACACGAGGGTGCTGCAGCCCGT
CTGCGCTCCCGGATTCGCTGTGAAGTATGGTACAATCGAAGAGCAGGCTA
GTATCGGCGGCTTGCACGGTGTGCACAGCAGTATACTCTAATACCTAGGA
GCCGTTGTGTGCGACGTAAAGTACAGCCAGTAAAGCACACACGAGGAATC
GTGTACAACAGTTGTAGAATTATTTGAAGTATATACGAGGTTCACAAGCA
CAAGACAGTATATGCTATTATGTCGCCTACGTGTACACCCTGTGCAACAG
AAGAATCCACTGGCAACAAGGTATATTTCCTTACCTACGAGCTGGCGAGC
CCGCCGCGCTCTAGCAGCCATCCTTACGGCCTCGCCTGCAGCAGACGCCG
GACGTACATGGACGCCGGACTATTACTGTGCCTATAGAAAAATCCTTGAA
TATGGAGGAAGCGCTTTACCCCGAGCGGGAACATTTTTTTATACACCCGA
GCTCAAATTGATGCACCTGCCAGATTAGAAGCTCACTACGCTCGCAAATA
TTAATAGCTTAGACTGAAGAGCGCGACAGCGCCGGGTTACGCGATCATGT
CTCGTTTTATAAACATACTAAATATTTATAGTATATTTCCGTTGATGACC
AAAAATAAATACCGCAAGTATCGGCATTAAGAGTCTTGGCACACTCCCCT
AGACTGACTTTCCAGGCTCGATTGCTCCACAACCAAGAGGATGTGAACAC
CGACCGATACGTCTAAAAAAAGCCCTCCACGAGATCTTTCGAAAACCGCC
CTTTTCGGCATTGGCACCCTCTTGGCTGTGGAGCAATCGAGCCTGGAAAG
TCAGTCTAGGGGGTGTGCCAAGACTCCCATACTTACGGTACACCTATTAA
TAGTTACAGACGATAGTTCCTTCGTGATAATATTGATACTAATTGTTCGC
TCTGCGCTACAGATGTCAGCGCCTTCTGCTCTTTTTTCTTGAAACCGCTG
TTCCGCCGATCGATAACAGGCTAGAGGATAAAACATAACTCCTCACTTTT
GAAGCACGAGAATTCAGAAATATACAATGCCCGGGCGCTGAAACTTGTCA
TGAGCAACGCTATGATAATTGTCGAGGTTGTCCTGCGTTTTTTACATGGC
ATGATAACCAAAGCCCACAAAAAGGAAGAGGAAGCTCGAGAGCACTCACT
CTCTCCCAGCATTTTTTTTTTTTTGCTTTTCCCGTCGTTTCAAAATTGAT
GTAAATGTCCGTTTGTTTTCCGTCTGGCGAAGGAGCGCGCTAGAGAAAAG
ACGCAAGACGGCAATGATGGCGAGCACGGTGGCGAGCACGAGGACGGTAG
TGGCGCTGAGGTAGAAGAAGACGGGCTCGAGCCAGAGGCGATCCGGGACA
AGACGATGGACGTGACGTCCATGGATGCTCTCAAGAGAAAGATTCAGGTA
CAATCGAGGGCAAAGCTCCATTCCTGTGCCAAGAGTTGGGTGTTTTGTAG
TAGACTCGTCGCTCGGGGCGTCAACAGACGGGATGTAGCCCCGCATCAGA
GAAAGAGAGAGAGGACCCGCAGGGATCGGCATTGCTGCTTGCACTCGCGC
AGACAATCGGTGACGTGCGTGGCGAAGAAAGCACAAGTGGGCATTAGTGT
CGTGCACGGGCATGACCGCGGGGGCTTCGCCGCTGCCTCGGTCTTGACAT
TGGCATGCGACATGCCTACGACGATGACGATGGAGCATGTGAAGACCGAC
TGTGTCTCGACGCCCCTGTTTGATGGTGCCAGTTGTAATGTCACAACTTT
GGTGCTGTTGTATAGATGCATGGATCTGATACGGTAATCGCTCACGAGGT
CTTTTTCAGGCTAGTATTGGTGGTATGAAGAAGAGATGTCCAGACGCCAA
CAACCGAAGGAAAGAGTCTTCATGATATTTTTCCACTTCCCCTCATGGTC
TCTCTATATATGACGTGTCCCTAGTATAATACATAGCCGGTAGTCAACCT
CACCGGTCCCCCCCTCGACGCTGCGCGTTATCGCACCAGCGGCGGCCGTT
TCGCACACGCCACCCCGACCATAACGTATCCCGTATTTGCATTGCATGTT
TGACCAAGCGTGAAACAAGGATAATATCATAAATGGACTATGACGCTGTC
GCGGAAAGCGGGAGGAATCCCGTGAGTAAGCACCAGATTCAGCCTGAATG
TGGAGGGGAGCAGGATGACGCGGAACGGGACGGCCGAACCAGTCTCGCGA
GAGACCAAACTCTCTGGCGCAAACGGAGTCAGGGATTTTTCTTTTCTTTT
GAGCTGACCACGAGCAGGATTGGCAAACCTTAACGGGTTGATCCATTCTC
TGCGAAATGCGATGATCATTCATACATAAATACATATAATATACTGTAGG
AGGATATCTTCCGCACTTCATGACCTTACCTAAGCCCACCGATACTGACG
CGACGGCTTGTTGGTGGGATCCAGGATCGCATCAGCGCCATGCAGCAGAA
GCGTATGGCCGCCGAGGGAGGCCGCCGAGCGAAGACCTCGGAGAAGAGGA
GCGCTGAGCGGCTGGTGAAGCGAGAAAGCAAACGGAAGGGTGCCAAGGCG
AGGAAAAAGGGCAAGGACGAGGGCGAAAAGAAACATCCTTCGATCGCGGT
CGCTAGTGCTACGGGGCCCGAGCCTAGAGGAGGTGAGGACGCAGGACTCG
TATTACGGGGTTGCAAGAGAGAACTAGTTTGTTAGCCTTGGAACCACGGC
GTCTTTGGGTGAAATCTGGCGTTTGGAGCACCGTACGTGACATAACAACT
GCCTTCCCCGCTTTAGTGACGTAACAACGGAGTATCCTCCGATCGTCTCG
ATTGCACGTATTGCCGCAAGCGCTTTGAGTTGCACTTGACCTATCATGAG
TGTGACCCAAATGGTTTCTCAGGCCCCCCGTCGTATATATTTCGTTTCGC
GGTTGTTCTTCTGTGTTAACTTCCTCTTCTGTGACGGGCGTCCTTAGCCC
CGAGGGATTCAAGCAGAAATTCTTCCAAGGAGCCGAAGGCAGCCGGGACG
CATGTCAGCGGACCCCGCGCAAAACCGGAAGCGTTGCGCCCCGTCGCGGA
GCCGCAGCTTCCCCCTCTGCCTACAATTGAGGACGTAGGAGACATCGAGG
TCAGTGTTTTCCCCCAGAAGAGAAACCCTCTGCGCCCACCCCTTCGAAAT
GGCCCAAGCTCTTATATTCGACGTGGCATTCTGTCGTGTGAGCACTGGAT
GGGATGGCTTCGCGTAGGTTCCACTACTTCTGTAGCACAACTTCAGCGTC
GATCCGGTCCTTCTGGTCTGTCGCTGTTATTGTACTATGTACGCATCTCT
TGACCCGTCCATCTCATCCATCTTCGCCCGCACTGGCCCCTGCGAACTCC
CATGGTCACTCACAACGTGCCTCATCGGGACCGAAACGCGCTGTAGTTTT
CCGGGCTGCGGGGGGTTATCGGCCGGAGCGATGGCGAGAAGCGGCGCCCG
CCCAAGGTCGGCGCACCCGGCAGCAAGATGAAGCGGCTGCACGGGCTGCT
GGCAGCGGCTGAGGAAAAGAAGCAGCGCCTGGCGGGTCTCCGGCAGACCA
AGGAGGGCAAGGAAGTCGCCAGGCAGGAGGGATGGGAGGACGCGATCCGA
ATCGCGGGGGGAGAGGAGGTGAAGGACAACCCCGGCGCGCTGAAAAAAAT
GATCAAGCGGAAAGAGAGGGAGAAGGCTAAGAGCGCTAACAACTGGGACC
ATAGGATTGCGGGGCAAAAGAAGGAGCAGGGCAAGAGGCAGGAGAAGAGA
GAGGAGAACCTCAAGAAGCGCAAGATGGGAGGGGTGGCAGCAGCTACGAC
GGCTACGGGGGCGGGGCGCGGGGATGCGACAGAAAGCGCAGGCGAAAAGG
TGAGTTTTCCCGTCTGCGAGTTATCTTTTAGGTGGTCTCATTTTGTGTGC
TTGAACGACGCCATCGGGTCTTAATATAGGCTTGAGAAAGGTCTGTGGAA
TGGTGTAGATGGTATAATCTTCATACAGACGTGCGTCCGCCTCCCTTAAG
AAAGTTTTCTTTTTCACGAGCAATGCAAAGGAAGCAGCAGATGCTTCCCC
TCCCGGAGAAGCAGCAGATATCTCAACCGGTGGAATCTTTGTGCAAGGTT
ATCCCCCCCCCGCTCCCCGGGACGGCTGCCCTCTCCCAACAAAACCCCAG
TTTTTCTCCATCGAAGTCGCGAAGGGGGAAGGAATTCTTGCTCGATTTGC
CTGCTTTACTCTGGGAAGAAGCACGTCGTGTAAGGATCACGCTCTCACAG
TTATATTTTATTGAAGTCTTTTGCCCCTTGGCTTTCACCGCCGCCCTCCT
GCACCCCAACCGTAACCGTAACCGTAACCTTACGTATAACCCCCTCGTCG
GGTCGGGTGATGTTTGGGTCGCAGCGTCGTCGACGAGCGGGTTTCGAGGG
AAAGAAGAACGACTTCATCAACAAAGAGAAAACCCGGGGAGGCGTGATGA
AGAACGGTGGCGGCCGCGGTGGTGGTGGCCGCGGTAGTGGCGCGGGGAAG
CCCATGGGAGGACGAGGAGCCGTGAGGGATAAGGCGAAAGGGTAGAGCCG
GAAGCCGGTAAAACGCTATACGCTACGATCGGAAATGCGGTTTTCTCCAG
ATTTGCTGTTGGGGTGTGAGAGGGGGAGATGAAGCATCCAGTCTGTTCGT
TGCCAAGTGTTAGATTCAGGCGCTGACGCGCGTTTTGTTGCTACCTCCGC
GGCGTGCCGAGTGCAGAGGATTTCGAGTTGATGCGCGAAGCTCGTTTGTG
GGGCGTTGTGCAGTGCGAACAGCAGTATTCTAATTTGTTTGAGCACCAAG
ACAGTGAGCTGATGGGGGGAACCCTCAACGAAGGAGGCCTCGTGATGAAA
CACTCTCGGACGGTCATCGTAAAATTCCGCTCAAAAGATGGTTAGATACG
CCGGGGCGATAGTTGACACAAGTGCGAGTCGCCGTCCGAACGTAGGTCGT
CATTGGGTATATCCTTTGCTGGGGAATGGGCCATCGGCTCTCGTGACAGG
CTCGGCAGACTTGGTTTGGAGCAGAAGCGATGGCACATCGAGAAAAATGA
GAAACCCACCAGCGCC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig958:271990..280005-

>mRNA_A-nodosum_M_contig958.35.2 ID=mRNA_A-nodosum_M_contig958.35.2|Name=mRNA_A-nodosum_M_contig958.35.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1338bp|location=Sequence derived from alignment at A-nodosum_M_contig958:271990..280005- (Ascophyllum nodosum dioecious)
ATGCTAGACATGATTCCTGAGAGCCTTGTGTTGCCGGCGAAACAGGTGTC
GGAGCCTTCCTACGCCAGCAAGTACATGAAGAACAAAAAGGACGATGCGC
CTCAGCAGTCCAAGAAGGAAGAGTCGAAGAAAAATAAGCGTGCGCGATAC
GCCGCGGACAACCAGAAGACTGTCTCAGAAAGGCAGCAGGAGCGCGCTAG
AGAAAAGACGCAAGACGGCAATGATGGCGAGCACGGTGGCGAGCACGAGG
ACGGTAGTGGCGCTGAGGTAGAAGAAGACGGGCTCGAGCCAGAGGCGATC
CGGGACAAGACGATGGACGTGACGTCCATGGATGCTCTCAAGAGAAAGAT
TCAGGATCGCATCAGCGCCATGCAGCAGAAGCGTATGGCCGCCGAGGGAG
GCCGCCGAGCGAAGACCTCGGAGAAGAGGAGCGCTGAGCGGCTGGTGAAG
CGAGAAAGCAAACGGAAGGGTGCCAAGGCGAGGAAAAAGGGCAAGGACGA
GGGCGAAAAGAAACATCCTTCGATCGCGGTCGCTAGTGCTACGGGGCCCG
AGCCTAGAGGAGCCCCGAGGGATTCAAGCAGAAATTCTTCCAAGGAGCCG
AAGGCAGCCGGGACGCATGTCAGCGGACCCCGCGCAAAACCGGAAGCGTT
GCGCCCCGTCGCGGAGCCGCAGCTTCCCCCTCTGCCTACAATTGAGGACG
TAGGAGACATCGAGTTTTCCGGGCTGCGGGGGGTTATCGGCCGGAGCGAT
GGCGAGAAGCGGCGCCCGCCCAAGGTCGGCGCACCCGGCAGCAAGATGAA
GCGGCTGCACGGGCTGCTGGCAGCGGCTGAGGAAAAGAAGCAGCGCCTGG
CGGGTCTCCGGCAGACCAAGGAGGGCAAGGAAGTCGCCAGGCAGGAGGGA
TGGGAGGACGCGATCCGAATCGCGGGGGGAGAGGAGGTGAAGGACAACCC
CGGCGCGCTGAAAAAAATGATCAAGCGGAAAGAGAGGGAGAAGGCTAAGA
GCGCTAACAACTGGGACCATAGGATTGCGGGGCAAAAGAAGGAGCAGGGC
AAGAGGCAGGAGAAGAGAGAGGAGAACCTCAAGAAGCGCAAGATGGGAGG
GGTGGCAGCAGCTACGACGGCTACGGGGGCGGGGCGCGGGGATGCGACAG
AAAGCGCAGGCGAAAAGCGTCGTCGACGAGCGGGTTTCGAGGGAAAGAAG
AACGACTTCATCAACAAAGAGAAAACCCGGGGAGGCGTGATGAAGAACGG
TGGCGGCCGCGGTGGTGGTGGCCGCGGTAGTGGCGCGGGGAAGCCCATGG
GAGGACGAGGAGCCGTGAGGGATAAGGCGAAAGGGTAG
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