mRNA_A-nodosum_M_contig957.14.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI) HSP 1 Score: 218 bits (554), Expect = 4.900e-62 Identity = 174/490 (35.51%), Postives = 249/490 (50.82%), Query Frame = 1
Query: 1 MAVNFAVSTKAPILPIPLDNEMLHGLRRFSDRFAGKPMSQASLKALQCVPLAWACLAVRGGDNVCSEA*LSGIQKYAGDRG---------SGVD*GDRESDERHGGRNQDANWVERGTVLHYSR--DRQREKGDFYAEASDLYDEVQTLENR----------VHQRSCMVVRHARGRRR*TSIWHKSRGRT*GIGEGHVASVR*IQERRDEGPGSVGIRRG*RSLGWRR*RRGRGCVRGGRELGSFDSDHASSIQLNCGGSSEAVD--------TPDSLARMAAAAHLQALAGSGAAGDGTPRGEVMDKPD---EMPDRYYYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAK--------DEEIDITEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKDLAKKDEIDKENKKARTEFLDTRKKGLAAMEEANIHVGVLSANIKRLVELREKQAAAAARAEKITSLEKKLMLGLGDPRVV 1350
MA+NF +S KAP L I L +M+ G R+ D+F G+ M+QA LKALQCVP+A A LAV+ G+++ S+ + + K + + + E HG W + L+Y+ + + F L+ + + L+ H S + G + ++ S +G+ A +++ + RS G V G S A+ +P +LAR AA A + +A A+G G+ G + +P+ ++PD YYYPYLLLAC W+SW GNTPSEWK+LA+SSGP+ R K E+ IT+DNPIGSP AM +N NGDA+SRRQ++A IK+EK+ KKD +KEN R E LDTRK+GLAAME AN HVG LS+NIK++V+L+E+ AA R +KI +LE+KLML + DP +V
Sbjct: 1 MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGELVFPHG-------WKD---ALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESSTELNS--GTQTTDALDDLSADMYRKATKGNAA--------KEDAAADIFFNTPRRSA--------EGVVVSGVTTTSPLPTPAADAXXXXXXXXXXXXXXXXXXXTSPQALARRAAEALRREMASPTASGSGS--GANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMV 460
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5K6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E0_9PHAE) HSP 1 Score: 155 bits (393), Expect = 2.300e-41 Identity = 81/164 (49.39%), Postives = 115/164 (70.12%), Query Frame = 1
Query: 847 EMPDRYYYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEEIDITEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKDLAKKDEIDKENKKARTEFLDTRKKGLAAMEEANIHVGVLSANIKRLVELREKQAAAAARAEKITSLEKKLMLGLGD 1338
E+P+ + +P+LLL ++ W G PSEWK+L SS GP ++K ++ + +NP+ SP+ MSRLNPNGDA+SRRQH+AAIKREK+ +K DK ++A E L+T+KKGLAA+E A+ H+ + AN+KR+VEL+E +A R +I LEKK+ML LGD
Sbjct: 30 EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGG----DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQERKKAADKRLQEAWKEALETKKKGLAALEAASTHIETIGANMKRMVELKEAEAVGIKRKNRIKVLEKKVMLRLGD 189
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE) HSP 1 Score: 154 bits (389), Expect = 2.190e-39 Identity = 83/163 (50.92%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 850 MPDRYYYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEEIDITEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKDLAKKDEIDKENKKARTEFLDTRKKGLAAMEEANIHVGVLSANIKRLVELREKQAAAAARAEKITSLEKKLMLGLGD 1338
+P+ + +P+LLL ++ W G PSEWK+L SS GP K++K + ++ + +NP+ SP+ MSRLNPNGDA+SRRQH+AAIKREK+ K +KE ++AR E L+T KKGLAA E AN HV + A++KR+VEL+E +A R KI +LEKK++L LGD
Sbjct: 137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGA----DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQEMKAAAEKELQEARKEPLET-KKGLAAFEAANTHVETIGADMKRMVELKEAEAVGIKRENKIKALEKKIVLRLGD 294
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE) HSP 1 Score: 143 bits (361), Expect = 7.930e-36 Identity = 80/164 (48.78%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 847 EMPDRYYYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEEIDITEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKDLAKKDEIDKENKKARTEFLDTRKKGLAAMEEANIHVGVLSANIKRLVELREKQAAAAARAEKITSLEKKLMLGLGD 1338
E+P+ + +P+LLL ++ W G PSEWK+L SS G K++ ++ + +NP+ SP+ MSRLNPNGDA+SRRQH+AAIKREK+ +K DKE + L+T KKG AA+E AN HV + AN+KR+VEL+E +A R KI +LEK +ML LGD
Sbjct: 120 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSKKRTGG----DVTVDSENPVYSPAVMSRLNPNGDALSRRQHFAAIKREKEEERKAAADKELQXXXXXALET-KKGPAALEAANTHVDSIGANMKRMVELKEAEAVGIKRENKIKALEKIIMLRLGD 278
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE) HSP 1 Score: 136 bits (343), Expect = 2.260e-31 Identity = 71/138 (51.45%), Postives = 101/138 (73.19%), Query Frame = 2
Query: 176 EAETMSAAKRNLAASKSMQEIAVPGWIKVIEKAMNDTEGAIRMPTGWKEALYYTTLGTGKGKRETFMQKPATCMTKFKPLKTEYTKGAAW-WYDTHE-DVAAKLPSGTSPEDALKELERDMWLQSVRSRKDVTKAQEA 583
EA+ MSAA+RNLAASK MQEIAVPG+IK+IE A++ EG +MP WK +YYTTLG+G K +TFM+KP+T +TKFK K +YT+ W W DT++ + ++LPSGT+ +D+L+EL MW +S ++D ++ +A
Sbjct: 164 EADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSTMEGPPQMPHKWKVMVYYTTLGSGTSKAKTFMEKPSTVLTKFKSYKAKYTR--VWLWLDTNDKNTPSELPSGTNTQDSLEELNDAMWFESDMYKRDKARSDKA 299
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE) HSP 1 Score: 124 bits (312), Expect = 3.180e-29 Identity = 62/121 (51.24%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 847 EMPDRYYYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEEIDITEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKDLAKKDEIDKENKKARTEFLDTRKKGLAAMEEAN 1209
E+P+ + +P+LLL ++ W G PSEWK+L SS GP K++K ++++ +NP+ SP+ MSRL+PNGDA+SRRQH+AAIKREK+ +K DKE +++R E L+T+KKGLAA+E AN
Sbjct: 117 EVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGG----DVNVDSENPVCSPAVMSRLDPNGDALSRRQHFAAIKREKEQERKATADKELQESRKETLETKKKGLAALEAAN 233
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5KE63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE63_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 3.740e-19 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 991 EIDITEDNPIGSPSAMSRLNPNGDAMSRRQHYAAIKREKDLAKKDEIDKENKKARTEFLDTRKKGLAAMEEANIHVGVLSANIKRLVELREKQAAAAARAEKITSLEKKLMLGLGD 1338
++ + +NP+ SP+ MSRLNPNGDA+SRRQH+AAIKRE++ +K DKE + AN HV + AN+KR+VEL+E +A R KI +LEKK+ L LGD
Sbjct: 53 DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREQEHERKAAADKE-------------------QAANTHVETIGANMKRMVELKEAEAVGIKRENKIKALEKKIRLRLGD 149
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5K1D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D4_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 5.330e-14 Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1036 MSRLNPNGDAMSRRQHYAAIKREKDLAKKDEIDKENKKARTEFLDTRKKGLAAMEEANIHVGVLSANIKRLVELREKQA 1272
M RLNPNGDA+SRRQH+AAIK+ K+ +K DKE ++AR KKGLAA+E AN HV + A+ KR+VEL+E +A
Sbjct: 1 MFRLNPNGDALSRRQHFAAIKQVKEQERKAAADKELQEARXXXXXXXKKGLAALEAANTHVESIGASTKRMVELKEAEA 79
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5KFH5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFH5_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 2.980e-13 Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 2
Query: 176 EAETMSAAKRNLAASKSMQEIAVPGWIKVIEKAMNDTEGAIRMPTGWKEALYYTTLGTG 352
EA+ MSAA+RNLAASK MQEIAVPG+IK+IE A++ G ++MP WK +YYT+LG+G
Sbjct: 60 EADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSIMGGPLQMPHKWKVMVYYTSLGSG 118
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Match: A0A6H5KVE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE3_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 2.340e-11 Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 844 DEMPDRYYYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEEIDITEDNPIGSPSAMSRLNPNGDAMSR 1074
+E+ + + +P+LL ++ W G PSEWK+L SS GP ++K ++ + +NP+ SP+ MSRLNPNGDA+SR
Sbjct: 30 EEVSEWWVFPFLLHTAAYSPWSGQAPSEWKHLDSSDGPSIKRKGG----DVTVDSENPVCSPAVMSRLNPNGDALSR 102 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig957.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig957.14.1 >prot_A-nodosum_M_contig957.14.1 ID=prot_A-nodosum_M_contig957.14.1|Name=mRNA_A-nodosum_M_contig957.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=199bp MAAAAHLQALAGSGAAGDGTPRGEVMDKPDEMPDRYYYPYLLLACMWTSWback to top mRNA from alignment at A-nodosum_M_contig957:138516..141145+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig957.14.1 ID=mRNA_A-nodosum_M_contig957.14.1|Name=mRNA_A-nodosum_M_contig957.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2630bp|location=Sequence derived from alignment at A-nodosum_M_contig957:138516..141145+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig957:138516..141145+ >mRNA_A-nodosum_M_contig957.14.1 ID=mRNA_A-nodosum_M_contig957.14.1|Name=mRNA_A-nodosum_M_contig957.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=597bp|location=Sequence derived from alignment at A-nodosum_M_contig957:138516..141145+ (Ascophyllum nodosum dioecious)back to top |