mRNA_A-nodosum_M_contig954.15.3 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: D7FVN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN3_ECTSI) HSP 1 Score: 685 bits (1768), Expect = 8.820e-239 Identity = 406/656 (61.89%), Postives = 458/656 (69.82%), Query Frame = 1
Query: 1 SHGTHGRVVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDGGRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTEEAARLCEDAEEGKAEDVAIAPETDLQGVAGHRLDPTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVSWSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFATVRDREAVVMWMRLLTKELADRIVVDRKVWSRRATKLTLQIISLRAISTTQATSTGAKGEASKSTSLTRSRTVDIPGGGGEPPTAEALVCEAMSVFEKTENALPCSRIALTAHDFVGLVSGRGSIASFLRVSPLKCV-----------PPPSGGSPVCETACARTAASNGSKCEGGSLSDSARHVDDECDGSVGSRASEALSPEGAVGRGDGGSGSESSR---SGDVGRSRCERNMEIPSTEPNKEPCPNCGEPIAPDKLPEHLDFHYAQGLQERYTREGHVAADIAARAPSSEAA-KRRIAEDQRGPTRRPKAKKHSPRRGSNGGATTRIDSFFKP 1923
SH HGRV+VHADLDCFYCQVEHVRLGIP S PLAVQQWDGLIA+NYEARK GVKRGDRT AK+KCPQI VHVETI D D G RH + KVSLERYR AS AIM IFQAHCRRVERASIDEAY+DLTEEAA+LC++ E G A DVA +PETDLQG AGHR+DPTNAFDRALLAGARLTAAMR AVE+ELGFTVSAGIASNKVLAKLASS NKPNKQT+V AGASS+MLD+VP+R +RGLGGKLGE+VVSWS AE ASDLKRF+Q +LV NFG KTG WLWR CRGMDDE V PNL+PKSLSVCKSF VRD E+V+ WMRLL EL+ RI VDR+ WSRRATKLTLQ+ISL+ S G G +TS TRSRTVDIPGG GE PT +LV EAM+VF KT+NALPCSR+ALTAH+F GL+SGRGSIASFLR P P GS + + A + S GG S D++ G+ + AS VG D S S + + C+ P E CP CG+ +AP+ L EHLDFHYA+GLQERYTREG VA D+AAR E KR+I E G +R K++ P G RIDSFFKP
Sbjct: 4 SHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTTAAKQKCPQITLVHVETIGADDELDDAGT-----RHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAEKASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDDEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGG-GNGKSNTSTTRSRTVDIPGG-GESPTTASLVSEAMAVFAKTDNALPCSRLALTAHEFCGLISGRGSIASFLRALPXXXXXXXXXXXXXTSPLEKWGSKGVKPDAKQALAVDPSGQAGGGRS-LPEGDDEDVPGTETAEASIGPRDVPRVGSKDDSRVDRSRNFQPSSHLAGAACDERTAPSPLRPGYERCPKCGKVLAPEDLQEHLDFHYAEGLQERYTREGDVARDMAARMSDREGLPKRKIQEA--GGGKRAKSQTKRPAAG------LRIDSFFKP 643
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A0G4ETT1_VITBC (UmuC domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETT1_VITBC) HSP 1 Score: 327 bits (837), Expect = 1.390e-99 Identity = 210/460 (45.65%), Postives = 269/460 (58.48%), Query Frame = 1
Query: 19 RVVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDGGRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTE----EAARLCEDAEEGKAE--DVAIAPETDLQGVAGHRLD----PTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVS-WSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFATVRDREAVVMWMRLLTKELADRIVVDRKVWSRRATKLTLQIISLRAISTTQATSTGAKGEASKSTSLTRSRTVDIPGGGGEPP----TAEALVCEAMSVFEKT--ENALPCSRIALTAHDFVGLVSGRGSIASFLR 1347
RVV H DLD FYCQVEH RL I R PLAVQQWDGLIA+NY AR GV+RGDRTA AK KCP +V VHVETI DG G + RH + KVSL+RYR AS+ IM IF HC +VERASIDEAY+DLT+ E R+ AE D ++ L V G LD ++ + +L+ GA L A +R AV E FTVSAGI+ NK+L+K AS+++KPN+QTLV + +M+ +P+R +RGLGGKLGE+V + A TA DL+ + EL F TG WLWR+CRGMDDE V+PNL+PKSL KSF VR E + W+ +L +E+ DR+ D + RRA L Q G G A RSR+ +P G+ P + + LV +++ K + LPCSRI + A DF + S SI S+ +
Sbjct: 17 RVVAHLDLDAFYCQVEHRRLNIARDVPLAVQQWDGLIAVNYPARAAGVRRGDRTAVAKGKCPDLVLVHVETISSDGRHPGSDDPAD--RHDRQREKVSLDRYRTASAEIMAIFSRHCPKVERASIDEAYLDLTQQVQAELKRVVGGGGPSLAELVDAEGTRDSTLLAVDGSVLDVDKVSLDSPEASLVVGAVLIARLRKAVLDETQFTVSAGISHNKMLSKQASAKHKPNRQTLVPTSSIDDMMGHLPLRDVRGLGGKLGEAVSRVFPDATTAKDLQAHSLEELKRTFNDGTGTWLWRVCRGMDDEQVSPNLKPKSLLAFKSFRPVRKMEDLERWLGVLAEEVCDRMQADTEAHRRRAKTLMAQ-------------HRGLSGAA-------RSRSGPMPR--GKDPHGLLSKDELVAAGLALLRKLPEDELLPCSRIGMGAQDFEDIDSQTASITSYFK 452
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A7S2SV00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV00_9STRA) HSP 1 Score: 326 bits (835), Expect = 8.320e-99 Identity = 256/715 (35.80%), Postives = 349/715 (48.81%), Query Frame = 1
Query: 22 VVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDG-------------GRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTEEAARLCEDAEEGKAEDVAIAPE-TDLQGVAGHRLDPTNAF-DRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVSW---------SGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFATVRDREAVVMWMRLLTKELADRIVVDRKVWSRRATKLTLQ---------IISLRAISTTQATSTGAKGEA--------------SKSTSLTRSRTVD-----------IPGGGGEPPTAE----------ALVCEAMS----VFEKTEN-----ALPCSRIALTAHDFVGLVSGRGSIASFLRVSPLKCVPPPSGGSPVCETACARTAASNGSKCEGGSLSDSARHVDDECDGSVGSRASEALSPEGAVGRGDGGSGSESSRSGDVGRSRCERNMEIPSTEPNKEPCPNCGEPIAPDKLPEHLDFHYAQGLQERY-TREGHVAADIAARAPSSEAAKRRIAEDQRGPTRRPKAKKHSPRRGSNG----GATTRIDSFFK 1920
V++H DLDCFYCQVEH RL IP STPLAVQQW+GLIA+NY AR FGV+RGDR AK KCP +VFVHVETI +DG G G +A + + KVSLERYR AS ++ + A C VERASIDE Y D+TE A R + D+ +PE T+ Q V G LDPT+ D LL GA +R + E FTVSAGIA K+ AK+AS+++KPNKQT+V ++ E++ ++ + +RGLGGKLGE V ++ G A L+ + L+ FG KTGRWL RICRG+D + V+PNLRPKS++ KSF+T+ ++ W+ +L EL DRI D ++ RR LTLQ + + +A T++ T ++ A SK + + ++VD + G EP +E A E S V K EN LPCSRIAL DF ++ FL+ P C +T+A + ++ G H + G GS A A GD G++ R+ CER CG IA D + EH+DFH+A +Q+++ ++E ++D R P GP R+ K S+G G +RIDSFF+
Sbjct: 1 VILHLDLDCFYCQVEHRRLSIPMSTPLAVQQWEGLIAVNYAARAFGVRRGDRVDVAKAKCPALVFVHVETIGEDGAAGLPSGEETHHRGTVGAPSAGQAQAPDRETCKVSLERYRSASFEVLRVIDAACPAVERASIDEVYCDVTEAALRRLKS-------DMPPSPEQTETQVVGGCPLDPTDTHGDALLLMGATFADELRRKIREETTFTVSAGIAHGKMFAKIASAKHKPNKQTIVPFASTEELMRTIELSDIRGLGGKLGEEVSTFLRSQDTPKTDGTFRAIALQAVPERLLIRQFGEKTGRWLHRICRGLDTDPVSPNLRPKSINCFKSFSTITAMAPLLRWLDVLCGELTDRIAADHALFKRRPRVLTLQHRSTLRPDHLKNWKAGVTSELTGMRSRSAALPPSLVSLILACYSSKQSKKRKRQSVDGAATPLVDSIQVHSGDAEPLGSEGETTPLTSSPAFPAELQSLARLVMSKLENDSGVPTLPCSRIALGVSDFCSESKASRVLSDFLKAQP-----------------CRKTSAESSAESSDGHTGPRPGH---DAVGDSGSPAQAAA--------GD----------GNLVRTTCER----------------CGASIALDAIQEHMDFHFAADVQQQWRSQEAKQSSDKQQRKP--------------GPVRKKATTKTKTGAASSGLASHGPFSRIDSFFQ 640
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A7S3C888_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C888_9CHLO) HSP 1 Score: 261 bits (668), Expect = 9.810e-77 Identity = 176/437 (40.27%), Postives = 244/437 (55.84%), Query Frame = 1
Query: 19 RVVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKD-GGRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTEEAARLCEDA--EEGKAEDVAIAPETDLQGVAGHRLDPTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVS-WSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFATVRDREAVVMWMRLLTKELADRIVVDRKVWSRRATKLTLQIISLRAISTTQATSTGAKGEASKSTSLTRSRTVDIPGGGGEPPTA---EALVCEAMSVFEKTEN-ALPCSRIALTAHDFV 1305
RV++H DLD FYCQVEH RLGI R+ PLAVQQW GLIA+NY AR GV R +AK CP + VHVETI GG+ G A++ SK SL RYR AS ++N+ + ++ERASIDE Y+D+T L +D G D ++ G L+P++ D L+ GA++ +R A++ E + +SAGI+ NK+L+KLAS+ NKPNKQT+V A ++ ++ + + GLGGKLG+ +V + G +TA DL+ + +LV G KT WL ++CRG D V PNL PKSL+ CKSF + AV W+ +L +EL+DRI+ D + + R T +++ L A S S+T + G P E L AM +FEK + LPCSR+AL A FV
Sbjct: 5 RVILHLDLDAFYCQVEHKRLGIDRNVPLAVQQWAGLIAVNYPARANGVGRFCDINEAKTACPDLRLVHVETIGNTKGGKVGAVEANK------GTSKASLARYRRASFEVINVMKRFSDKIERASIDEVYIDVT----ALVDDRLRRSGDFSDGGGLEWSESHVAEGAALNPSSEHDIRLIMGAKVCKEIRDAIKAETEYEMSAGISHNKLLSKLASAMNKPNKQTIVPTSAVPSLMSTLEYKQINGLGGKLGDRLVQLFPGLKTALDLQGVPREDLVRGLGEKTAGWLQQLCRGDCDSDVKPNLLPKSLNACKSFPA-SELGAVKKWLLILAEELSDRILEDHEDFGR-----TPRLLVLHARS---------------------SKTYEQHSSQGPMPAKWAKERLFEHAMRLFEKIQGECLPCSRLALGAAGFV 404
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A7S3EFR3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFR3_9RHOD) HSP 1 Score: 263 bits (673), Expect = 1.330e-76 Identity = 170/450 (37.78%), Postives = 244/450 (54.22%), Query Frame = 1
Query: 19 RVVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDGGRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTE--EAARLCEDAEE--GKAEDVAIAPETDLQGVAGHRLDPTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVSWSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFATVRDREAVVMWMRLLTKELADRIVVDRKVWSRRATKLTLQIISLRAISTTQATSTGAKGEASKSTSLTRSRTVDIPGGGGEPPTAEALVCEAMSVFEKTEN-ALPCSRIALTAHDFVGLVSGRGSIASFLRVS 1353
RV+ H DLD FY QVE VRLG+ PL VQQW+G+IA+NY ARK GV R D+ + K+KCP+ + VHVE + ++ DG+ Q +KVSL RYREAS+ I + RVERASIDEAY+DLT+ + R+ D +E G+A D + G LDP+ D +L+ G+ +T+ +R + ELG+T SAG+A NK LAKLAS+ NKPN QTLV +++ +P R +R LGGKLG + + G ETA ++ + EL FG K +++ I RG+D V P +PKS+ KS +D + V W+R+L EL DR++ D +V R A L + KS S+ R+ + +P G+ ++ E S+ T + + P + + LTA +F + SI FL+ S
Sbjct: 7 RVIAHVDLDAFYAQVEMVRLGVDEDAPLCVQQWEGVIAVNYPARKRGVTRFDKAGEVKKKCPECILVHVEVLTEER-EDGKE---------QPKAKVSLARYREASARIFKLILREIERVERASIDEAYLDLTDMVKKRRVIRDNDENLGRASDCIVL---------GEELDPSRKDDLSLIIGSEITSDLRRMIREELGYTCSAGVAHNKTLAKLASAMNKPNCQTLVPNSCVQGLMEKLPFRKIRQLGGKLGVELEAL-GVETAGQVQCYKLEELSRRFGQKNAHFVFDIVRGIDRSEVVPRSKPKSMLAAKSLPGEQDWDGVNRWLRMLASELHDRMLFDEEVNVREARNLVISF---------------------KSGSVPRTTSKTLPMPRGQSNRLARMLEEIQSLLRITPSFSFPIAFLGLTATNFEEKPADNESINKFLKPS 415
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A2K1JJV7_PHYPA (UmuC domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JJV7_PHYPA) HSP 1 Score: 265 bits (677), Expect = 3.110e-75 Identity = 187/497 (37.63%), Postives = 263/497 (52.92%), Query Frame = 1
Query: 13 HGRVVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDGGRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTEEAARLCEDAEEGKAEDVAI----APETDLQGVA-----GHRLDPTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVSWSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFATVRDREAVVMWMRLLTKELADRIVVDRKVWSRRAT------------------------KLTLQIISLRAISTTQAT---STGAKGEASKSTSLTRSRTVDIP-----------GGGGEPPTAEALVCEAMS--VFEKTENALPCSRIALTAHDFVGLVS-GRGSIASFLRVS 1353
H VV+HADLDCFY VE VRLGIP PLAVQQWDGLIA+NY AR G+ R +R ++A RKCP + VHVETI D E R N+K SLERYR+AS+ + NIF+ + + ERASIDEAY+D++E+ + E + ++E + ET +GV G L NA+DR LLAG+ + MR++V ELG+T+S GIASNK+LAK+AS++NKP++QTL+ A ++ ++P++ ++ LGGKLGE + G TA + ++ LV+ FG + G + W+ +G+ E V KS+ KSF + + + W+ +L+ +LA R+ D ++ R+ + LQ+++ A S T S A GEA S D P GG E A A V E S V E ++ PC+RIA+ A F L S G SI F S
Sbjct: 6 HTSVVLHADLDCFYAAVEQVRLGIPTEQPLAVQQWDGLIAVNYAARAVGIVRHERVSEALRKCPDLHLVHVETIGGDKPGTPESLGPR------GNAKASLERYRQASAKVFNIFRRYSKLCERASIDEAYLDVSEQVEEMLEKDMDWESELHRLLEPTGSETTSKGVPVMLIEGGSLAIYNAYDRRLLAGSIIADRMRASVRNELGYTISVGIASNKLLAKIASAKNKPDRQTLIPPRAVPGLMKALPLKKIKLLGGKLGEEMTKKWGCTTAGEAQQIPHAALVACFGDRLGTYAWKAVQGLKAEQVQVKDLVKSMLASKSFGAINELAGIRRWLSVLSHDLAIRMSRDFEMNQRQPKVFQLYYRSGKFKNSADHSRSAPMPRSVLQVLTSPAYSDTDGDAELSADAGGEAEVEVQGDLSELRDDPTADNVLDVGAQGGVSERTRALAKVLEDTSFRVVESIDDLFPCTRIAIAASGFQELPSQGTKSIHHFFTSS 496
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A2R6VZP2_MARPO (UmuC domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6VZP2_MARPO) HSP 1 Score: 267 bits (682), Expect = 5.740e-75 Identity = 156/358 (43.58%), Postives = 214/358 (59.78%), Query Frame = 1
Query: 4 HGTHGRVVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDGGRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLT--------------EEAARLCEDAEEGKAEDVAIAPETDLQGVAGHRLDPTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVSWSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFATVRDREAVVMWMRLLTKELADRIVVD 1035
H TH VV+H DLDCFY VEHVRLGIPR PLAVQQW+GLIAINY AR G+ R +R QA RKCP++ VHVETI DG G +R ++KVSLERYR+AS+ + IF+ E+ASIDEAY+D+T +E RL + EEG V P L P N++DR +LAGA + +R+AV ELG+T S GIA+NK+LAK+AS++NKP+KQTLV A ++ S+P+R ++ LGGKLGE + G TA + + LV FG + G ++W RG+ ++ V KS+ K+F + ++ + MW+ +L +EL+ R++ D
Sbjct: 14 HNTHSSVVLHVDLDCFYAAVEHVRLGIPREVPLAVQQWEGLIAINYAARAAGITRHERVHQAMRKCPELKCVHVETI-----GDGSGNVDGTSR---GHAKVSLERYRQASANVFKIFRRFSDLCEKASIDEAYLDVTSRVEKMMIQGCNWDQELHRLIGNQEEGSEMIVLDGP-----------LVPFNSYDRRMLAGAIIAEKIRAAVRSELGYTCSVGIATNKLLAKIASAKNKPDKQTLVPPRAVPYLMQSMPLRKVKLLGGKLGEEMTEKWGVSTAGEAQAVPLPALVGCFGERLGNYVWNAVRGIQNDKVQVKQVSKSMLAAKTFHSTKELSDIRMWLSILAEELSVRMLRD 352
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A0U9HQB4_KLENI (Putative Y-family DNA polymerase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HQB4_KLENI) HSP 1 Score: 264 bits (675), Expect = 5.520e-73 Identity = 163/364 (44.78%), Postives = 211/364 (57.97%), Query Frame = 1
Query: 19 RVVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDGGRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTEEAARLCEDAEEGKAEDVAIAPET-------------DLQG-----VAGHRLDPTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVSWSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFATVRDREAVVMWMRLLTKELADRIVVDRKVWSRR 1056
RV+VH DLD FY VE VRLG+P PLAVQQW+GLIA+NY AR GV R A+AK+KCP + VHVE I G +S+ + KVSLERYR+AS+ I+ IF E+ASIDEAY+DLT + L + E + V PET +Q V LDP+N +DR LLAGA + A MR AV ELG+T SAGIA NK+LAKLAS+ NKP KQT+V+ A ++ P+R +R LGGK+G+ + G ETA D+++ + L+ G K G W++R RG+ DE V KS+ KS++ E V W+RLL+ ELA RI D K+ RR
Sbjct: 3 RVIVHVDLDAFYAAVEQVRLGLPLDQPLAVQQWEGLIAVNYAARAKGVTRFMAIAEAKQKCPDLRLVHVEVI---------GGSSK-----REEGKVSLERYRQASANILPIFHRFSPLCEKASIDEAYLDLTAQVEALLNQSPEPETAPVYDNPETASASEKSEPISMASVQSRSDVIVLDGPLDPSNEYDRRLLAGATIVAQMREAVFHELGYTCSAGIAPNKLLAKLASAMNKPYKQTVVTPRAIPGLMKDFPMRKIRNLGGKMGKELCDTLGCETAGDVQKIPEAVLIEKLGDKMGPWVFRAVRGIHDEPVQTRQISKSMLAAKSYSLTNSIEDVRHWLRLLSMELAARIEYDVKLNKRR 352
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A835YYX1_9STRA (UmuC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX1_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.020e-70 Identity = 184/487 (37.78%), Postives = 245/487 (50.31%), Query Frame = 1
Query: 61 VEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDGGRDGEGAASRVARHI------QSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTEEAARLCEDAEEGKAE----------------------------------------DVAIAPE------------------------------TDLQGVAGHRLDPTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVSWSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFAT-VRDREAVVMWMRLLTKELADRIVVDRKVWSRRATKLTLQIISLRAISTTQATSTGAKGEASKSTSLT-RSRTVDIPGGGG--EPPTAEALVCEAMSVFEK-TENALPCSR 1278
V V L I R PL VQQW+GLIAI+Y ARKFG+KRGDR A KCP + VHV+TI G ++ KVSLERYR AS+ IM IF C +VERASIDEAY+DLT + + + + ++ D P T + GV G +D +NA D LL GAR+TA +R+AV ELG+TVSAGIA K+ AKLAS+R+KP+KQTLV A A++ +L VP+R +RGLGGKLG V + + A+ +DL+R+++ +L S FG K G WL I +G+DDE V N+ PKSL+ KS R +AV W+ +L EL +R D RR T L ++ R + G + T +T RS + + GGG P+AE LV A+S+F K + LPC+R
Sbjct: 370 VHQVELAISRDEPLCVQQWEGLIAISYAARKFGIKRGDRVEAALAKCPHLRLVHVDTIGCSGSXXXXXXXXXXXXXXXXXXRDRTREKVSLERYRAASARIMAIFARFCPQVERASIDEAYLDLTAQVHKALQARQHSRSRSSXXXXXXXXXXXXANDAXXXXXXXXXXXXXXXXXXDGECDAXXEPGGGGADCGGXXXXXXXXXXXXXGGSGAQVAGTAVLGVDGRGVDASNAHDALLLEGARITAHVRAAVRAELGYTVSAGIAHCKMFAKLASARHKPDKQTLVPASATAHLLAGVPLREVRGLGGKLGADVAARTHAQNLADLQRYSEAQLRSLFGDKGG-WLASIAQGIDDEPVVANIAPKSLNCFKSLPEPARSADAVRAWLHVLGGELLERAAADAAAHRRRPTTL---VVQHRGVLRADHRDNWVAGRTADLTGMTARSARLPVGSGGGALSLPSAEQLVAAALSLFHKCADQPLPCTR 852
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Match: A0A1X2HCH0_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HCH0_SYNRA) HSP 1 Score: 248 bits (633), Expect = 5.940e-70 Identity = 210/640 (32.81%), Postives = 297/640 (46.41%), Query Frame = 1
Query: 19 RVVVHADLDCFYCQVEHVRLGIPRSTPLAVQQWDGLIAINYEARKFGVKRGDRTAQAKRKCPQIVFVHVETIVKDGGRDGEGAASRVARHIQSNSKVSLERYREASSAIMNIFQAHCRRVERASIDEAYMDLTEEAARL----------------CEDAEEGKAEDVAIAPETDLQGV--------AGHR----LDPTNAFDRALLAGARLTAAMRSAVERELGFTVSAGIASNKVLAKLASSRNKPNKQTLVSAGASSEMLDSVPVRHLRGLGGKLGESVVSWSGAETASDLKRFTQGELVSNFGHKTGRWLWRICRGMDDEAVTPNLRPKSLSVCKSFAT-VRDREAVVMWMRLLTKELADRIVVDRKVWSRRATKLTLQIISLRAISTTQATSTGAKGEASKSTSLTRSRTVDIPGGGGEPPTAEALVCEAMSVFEKTENALPCSRIALTAHDFVGLVS----GRGSIASFLR-----VSPLKCVPPPSGGSPVCETACARTAASNGSKCEGGSLSDSARHVDDECDGSVGSRASEALSPEGAVGRGDGGSGSESSRSGDVGRSRCERNMEIPSTEPNKEPCPNCGEPIAPDKLPEHLDFHYAQGLQERYTREGHVAADIAARAPSSEAAKRRIAED 1824
RV+VH DLDCFYCQVE VR G+P P AVQQW GLIA+NY AR GV R A++ CP+I +HV T ++ E AR ++ KVSL+ YREAS I IF+ HC V++ +DE +MDLTE L C+ + V IA E + + A H DP D L GA L AA+R + EL +T SAGIA NKV+AKL SS+NKPNKQT++ A++ + P +R LGGKLG V + + A DL ++T +L FG TG WL+ + RG+D+E VT PKS+ KSF V+ E + W L EL R++++ + LT+ S + TT T +S ++ R + P + L A+ +F K E+ALPC ++L A V + S G SI+ F + V+ + PP SP + S+ H + E S +++ L+ A +SS S S++PNK C C + I +K+ EH D+H+A LQ A D + +PS+ + +R +ED
Sbjct: 13 RVIVHIDLDCFYCQVEQVRRGVPTHVPAAVQQWQGLIAVNYAARAAGVTRHANIEDARKACPEIQLLHVATYAEN-----ETEWKYHARPSRATHKVSLDPYREASKKIFTIFKRHCDTVQKIGLDECFMDLTETVNELMTKRYPTAALAADDDLCDQPIDWNKLGVTIASEDESERRRQLDNDVDADHEEESWRDPATWQDLQLAIGAELAAAIRQEIYDELSYTCSAGIAHNKVVAKLCSSKNKPNKQTILRHCATAAFMRDTPFTKIRNLGGKLGTEVETELNIDKAGDLWKYTVNDLQQRFGESTGLWLYNVARGIDNEEVTVTKAPKSIMASKSFRPPVKSSEEMQRWFATLAAELHTRMMLNFDEFDAWPKTLTIHYRSTQ--DTTYRT---------RSCAMPRRTDLTSP---------DKLAQRAIILFGKAEDALPCVGLSLNA---VAMQSSQTVGNHSISEFFKQGAKEVARMSGETPPRSASPSPQ---------------------SSMHDNGESGNSRSQKSAGILAYLNAP---------QSSNS-------------THSSDPNKWMCDKCHKNIPINKVDEHTDYHFALDLQ---------AEDRGSASPSTSPSTKRKSED 572 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig954.15.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig954.15.3 >prot_A-nodosum_M_contig954.15.3 ID=prot_A-nodosum_M_contig954.15.3|Name=mRNA_A-nodosum_M_contig954.15.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=528bp MNIFQAHCRRVERASIDEAYMDLTEEAARLCEDAEEGKAEDVAIAPETDLback to top mRNA from alignment at A-nodosum_M_contig954:102955..109441- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig954.15.3 ID=mRNA_A-nodosum_M_contig954.15.3|Name=mRNA_A-nodosum_M_contig954.15.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6487bp|location=Sequence derived from alignment at A-nodosum_M_contig954:102955..109441- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig954:102955..109441- >mRNA_A-nodosum_M_contig954.15.3 ID=mRNA_A-nodosum_M_contig954.15.3|Name=mRNA_A-nodosum_M_contig954.15.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=1584bp|location=Sequence derived from alignment at A-nodosum_M_contig954:102955..109441- (Ascophyllum nodosum dioecious)back to top |