mRNA_A-nodosum_M_contig952.3.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 553 bits (1425), Expect = 2.580e-171 Identity = 295/566 (52.12%), Postives = 392/566 (69.26%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNERGVGERFGAVCSGCDN-CEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFEN-VWGILTAVMCSIAAVVMTVVVVKYVTSANMGAGR--GIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLTDEE-GRDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAM--SRVQVEEPRPRFRQGR 2851
GALRLAG + + C+F +N S+ G A+S IGF I N C AGTF N G + F A+C+GC+ C+ C + CT VM+HSTS GG NVTL TLSIDRG+WRA+ ST VL CY+ DAC GG+TG+ +C GY GPYC +C+D Y + F C+KC EN GI AV+ ++ V + V VV YVTS +G GR GI + R +PLQS+KI+IV+WQILTQF SVA+VTYP +YQ L+ +DV NFDLSW++SAGCVV M+FHG+LL T+ P++A+LLL TYA RI R + L II +KHV++ LLL F VYSS SS +F+ F C+ LD KDYLRADY+IEC+S H+ + YAGFM ++Y +GIPAL+A +LF++R VL DE+ R++ VKSISNLW+PYKP+ +YYEVIEC RR+ L GV++ + ++AAQIAVTL++AF F ++SEGLAPY S+ D W+ R+GH VV +SMY ALLLKV+VS E +SQ++F+ VL+ +HV MIL V+ E + +++ R + PRFR G+
Sbjct: 946 GALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGG-NVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGK 1510
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 539 bits (1388), Expect = 4.120e-168 Identity = 287/592 (48.48%), Postives = 390/592 (65.88%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNERGVGERFGAVCSGCDN-CEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFENVWGILTAVMCSIAAVVMTVVVVKYVTSANMGAGR-GIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLTDEEG-RDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAMSRVQVEEPRPRFRQGRFWSTTRSVRVASAANYKSSNGSEIGIEEGR 2941
G LRLAG +SLD C+F DNIS+ GG A+S IG L ++N CD G + + G + A C GC+ C+ C E TCT VMEH TS GG VTL L ++RGYWRA+ S V CYN DAC GG+TG +C GY GPYCAVC+D Y F CT+C I A + ++ + + V Y S +G R G+ +RL + +PLQSVKI+IVAWQILTQF SVA+VTYP +Y+ FL+ +DV NFDLSW++SAGC+ +DFH +LL T+ P++ +L L GTYA + R ++L++I +KHVS+ LLL FL+YSS S+ +F+ F CE+L+D +YLRADYTI+CDS +HK YAGFM ++Y +GIPAL+AF+LFR+R VL D R+ S S+LWKPYKPS +YYEVIECGRR+ L GV++ + ++AAQIA+TL++AF F ++SEGLAP+ S+ DAW+ R GH VV VSMY ALLLKV+VSGE SQ++++IVL+ H MIL V+ ET + +++ Q +EP RFR G+ + + R + A + S++ + + GR
Sbjct: 693 GGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPP-VPPTCTDVMEHITSAGG-TVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFRHGKLFRSGRGLESAQDDPF-SADLRRVEVSPGR 1281
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 539 bits (1389), Expect = 4.520e-165 Identity = 292/566 (51.59%), Postives = 381/566 (67.31%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNERGVGERFGAVCSGCDN-CEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFENVWGILTAVMCSIAAVVMTVVVVKYVTSANM-GAGRGIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLTDEE--GRDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAMSRVQ-----VEEPR-PRFR 2842
GALRLAG +S++ C+F +N S+ +GG A+S IG +N C +GTF + F AVC+GC C C V TCT ++EHSTS+ G + TL TLSI GYWRAT T VL CY+ DAC GG+TG+ +C GY GPYCA+C++ Y FTC C +N GI A ++ +V+ V VV YV+S G GRGI R+ R +PLQSVKI++VAWQI+TQF +VA+VTYP +YQ FLN ++V NFDLSWM+SAGCVV +DFH +LL T+GP+ A LLL+ TYA RI+R + + L+ +RHKHV M LLL F VYSS S+ +F+ F CE L+D K YL ADY IECDS +HK YAGFM LLY GIPAL++F+LFR+R VL E G+D S S+LWKPYKPS +YYEV+EC RR+ L GV++ + +S+AQIA+TLI+AF F +ISEGLAPY S+ D W+ R+GH VVV SMY ALLLKV+VS E +SQ +F+ VL++ HV M++ V ET++ A+ + ++E R PRFR
Sbjct: 1047 GALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRD-TLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFR 1611
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 524 bits (1349), Expect = 7.640e-165 Identity = 292/593 (49.24%), Postives = 382/593 (64.42%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNERGVGERFGAVCSGCDN-CEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFENVWGILTAVMCSIAAVVMTVVVVKYVT-SANMGAGRGIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLT-DEEGRDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAMSRVQVEEPRPRFRQGRF---WSTTRSVRVASAANYKSSNGSEIGIEE 2935
GALRLAG +SL C+F +N+S+ G A+S +G EI N C TF N G+ CSGC C+ C V C+ V+ HS S GG VTL TLSID GYWRATN ST VL CYN DAC GG+TG+ ++C GY GPYCA+C+D+Y GFTC+KC GIL A ++ + V VV YV + G + L R +PLQ++KI++VAWQI+TQF S A+VTYP +YQ FLN +DV NFD+SW++SAGCV+ +DFH +LL T+GP++A+L L TY RI R + L+++ +HVSM LLL+FLVYS SSV+FQ F C++L+ +YLRADY IECDS +H+ YAGFM LLYP+GIPA + +L R+R VL D +GR+D V SISNLW+PY+PS YYYEVIECGRRI LTG+++ + ++AAQIA+TLI+ VF V+SE L PY D WV R+ HAVV +S+Y ALLLKV+VS E +SQK+F+ VL+ H MIL VV ETIL G + +EP PR +S T ++V A N + + + + E
Sbjct: 456 GALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCVQPPV--VPLCSDVIPHSRSDGGL-VTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPRVGGDSVTMRFSYTNEMKVGCAGNSSAEDDDDDHMNE 1044
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 3.090e-162 Identity = 285/564 (50.53%), Postives = 374/564 (66.31%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNERGVGE-RFGAVCSGCD-NCEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFENVWGILTAVMCSIAAVVMTVVVVKYVTSANMGAGRG-IFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLT-DEEGRDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAMSRVQVEEPRPRFRQGRF 2854
GALRLAG +S G A+S IG + N C F F AVC GC C+ C+ ++ V TC+ VM+H TSTGG VTL TLSID GYWRAT+ S +LPCYN DAC GG+TG+ +C Y GPYC++C+D Y G++C+KCF GI+ AV ++ A+ + VVV+ Y+ S G R + RL VPLQSVKI+IV+WQILTQF S A+V YPG+YQ FL+ + V FDL W++SAGCV+ M FHG+LL T+GP+ A+LLL GTYA RI R +++ L+II KHV + LLL FLVYSS SS +F+ F C++L+D K+YLR DY IECDS +HKV YAGFM LLYPLGIP L++ +LF++R VL D+ RDD VKS S LW+PYKPS +YYEVIECGRRI LTG+++ + ++AAQ+A+TL++AF F ++SE ++PY S+ + WV R+GH VV VSMY ALLLKV+VS E SQ +F+ VL+ +H MIL+VV ET + +R E+ RFR+G+F
Sbjct: 862 GALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGG-KVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLREDLPARFRRGKF 1424
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 510 bits (1313), Expect = 1.440e-159 Identity = 282/593 (47.55%), Postives = 379/593 (63.91%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNERGVGERFGAVCSGCD-NCEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFENVWGILTAVMCSIAAVVMTVVVVKYVTSANM-GAGRGIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLT-DEEGRDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAMSRVQVEEPRPR---FRQGR-FWSTTRSVRVASAANYKSSNGSEIGIE 2932
GALRLAG + ++ C+F +N+S+ GG A+S IGF + N C G F G + A+C GC CE C+ E+ V C+ +EHS S+GG VTL L I+ GYWRAT S NVL CYN DAC GG+TGS +C GY GPYCAVC+ Y G C+KC + I V S+A ++ TV +V Y S G RG+ R R VPLQSVKI+IVAWQILTQF SVA++ +P +YQ FL+A+++ NFDL W++SAGCV +DFH +LL T+ P++ +L L YA R S + L+ + HKHVS+ LLL FLVY+S S+V+FQ F CE+LDD K+YLRADY IECDS +H YAGFM +LY +GIPAL+ LFR+ VL DE R+ + ++LWKPY+PS +YYEVIEC RR+ L GV++ + ++AAQIAV L++A VF +ISE LAPY S+ D W+CR+GHAVV VSMY ALLLKV+VS E +SQ++F+ +L+ HV M+ V+ E I+ ++ V+ +P FR+GR + SV + + A+ +GS +E
Sbjct: 413 GALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGG-TVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLW-VEKRGQQPASSSFRRGRGIFRLRGSVSMFTEADDDPFSGSIYEVE 1003
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 514 bits (1324), Expect = 5.600e-157 Identity = 281/565 (49.73%), Postives = 374/565 (66.19%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTF--FNERGVGERFGAVCSGCD-NCEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFENVWGILTAVMCSIAAVVMTVVVVKYVTSANMGAGR-GIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLT-DEEGRDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAMSRVQVEEPRPRFRQGRF 2854
GALR +S G A+S IG + N C F F+ G G F AVC GC C+ C+ +++ V TC+ VM+HSTS GG NVTL TL ID GYWRAT+ S +LPCYN DAC GG+TG+ +C Y GPYC++C++ Y G++C+KCF GI AV ++ AV + VVV++Y+ S G R +F RL VPLQSVKI+IV+WQI+TQF S A+V YPG+YQ F++ + V FDL W++S GCV+ MDFHG+LL T+GP+ A+LLL GTYA RI R +++ L+II KHV + LLL FLVYSS SS +F+ F C++L+D YLR DY IECDS +HKV YAGFM LLYPLGIP L++ +LFR+R VL D+ R+D VKS S LW+PYKPS +YYEVIECGRR+ LTG+I+ + ++AAQ+A+TL++AF F ++SE ++PY S+ + WV R+GH VV VS+Y ALLLKV+VS E SQ +F+ VL+ +H MIL+VV ET + + E+ RFR+G+F
Sbjct: 922 GALRXXXXXXXXXXXXXXXVSGHQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEFDTSGDGT-FEAVCDGCRVACDGCSFDEQPAVPTCSDVMDHSTSPGG-NVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRQKLREDVPARFRRGKF 1483
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 506 bits (1303), Expect = 1.200e-150 Identity = 282/593 (47.55%), Postives = 382/593 (64.42%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNERGVGERFGAVCSGC------DNCEACTIEKEGNVSTCTSVMEHSTSTGGFN-VTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFENVWGILTAVMCSIAAVVMTVVVVKYVTSANMGAG-RGIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLTDEEG-RDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAMSRVQVEEPRPRFRQGRFWSTTRSVRVASAANYKSSNGSEIG 2926
GALRLAG ++L+ C+F +N+S GG A+S IG ++ N C G F + G+ A C GC D C E+ V C MEH+ S GG N +TL L +D G+WRAT + +VLPCYN +AC G+T S C GY GPYC++C+D Y G F C++C ++ GI+ A ++ A+++ V VV YV S +G G RG RL R +PLQS KI++V+WQILTQF +VA+VTYP +YQ FL+ + V NFDLSW++SAGC+VV+DFH +LL T+GP++A+L L TYA RI R + + L++I ++HVSM LLL VYSS SS +FQ F CE L D + YLRADY I CDS +HK L YAG M ++Y +GIPAL+ +LFR+R VL R++ V S S LWKPYKPS +YYEVIECGRR+ L GV++ + ++A QIA+TL++AF F V+SEGLAPY S+ D W+ R+GHAVV VSMY ALLLKV+VS E SQ++F++VL+ H MIL +V ET++ A++ + + P RF + F S R + S+ + S IG
Sbjct: 1502 GALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGC----FEEPPLVPICALAMEHTGSAGGTNNITL--LRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALRFWKALFRS--RQETIPSSDDVSEVELSPIG 2086
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 7.410e-147 Identity = 272/561 (48.48%), Postives = 357/561 (63.64%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNERGVGERFGAVCSGCDN-CEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFEN-VWGILTAVMCSIAAVVMTVVVVKYVTSANM--GAGRGIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKI-IRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLT-DEEGRDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAMSRVQVEE-PRPR 2836
GALR+AG +S++ C+F DN+S+ G A+S IGF ++ + C +GTF + G+ F AVC+GCD C+ C E+ C+ VM HSTSTGG N TL +SIDRGYWRAT+ S VL C+ DAC GG+TG+ +C GY GPYC++C+ Y K GF+CTKC EN GI+ Y+ S + GA G+ R+ R +PLQSVKI+IV+WQILTQF SVA+VTYP +YQ FL+A+DV NFDLSW+ S GC+ +DFH +LL T+ P++A+ L T A R R S Q L+ + KHVSM LLL FLVYS+ SSV+FQ F CE+L D K+YLR+DY IECDS HK YAGFM +LYP+GIPAL+A +LFR+R VL DE R+D V S S+LW+PYKPS +YYE+ AVTL++A FT++SE L PY S+ DAW R+GH VV+VSMY ALLLKV+VS E +SQ++F+ +L+ +H M+ VV ETI+ ++ + E PRPR
Sbjct: 663 GALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDPFEAVCAGCDIVCDGCVFEQGLVGPACSEVMAHSTSTGG-NTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPR 1198
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 483 bits (1243), Expect = 1.600e-144 Identity = 260/549 (47.36%), Postives = 357/549 (65.03%), Query Frame = 2
Query: 1175 GALRLAGASSLDGCTFEDNISNLDGGQAISWIGFNLEIKNXXXXXXXXXCDAGTFFNE-RGVGERFGAVCSGCD-NCEACTIEKEGNVSTCTSVMEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRDFCSTGYSGPYCAVCNDNYVKGPGFTCTKCFE-NVWGILTAVMCSIAAVVMTVVVVKYVTSAN--MGAGRGIFSRLLRRVPLQSVKIIIVAWQILTQFMSVADVTYPGMYQGFLNAVDVLNFDLSWMISAGCVVVMDFHGKLLTLTLGPMLAMLLLIGTYAYTKRIYRFSDQALKIIRHKHVSMALLLMFLVYSSSSSVIFQMFDCEKLDDDKDYLRADYTIECDSLRHKVLMGYAGFMFLLYPLGIPALFAFVLFRNRRVLT-DEEGRDDELSVKSISNLWKPYKPSRYYYEVIECGRRIFLTGVILIVDDDSAAQIAVTLILAFVFTVISEGLAPYESQTDAWVCRLGHAVVVVSMYYALLLKVNVSGETPASQKLFDIVLILIHVGMILTVVFETILTGYAM 2803
GALRLAGA+ C+F N ++ G A+S IG+ +++ C + + + + + F +CSGC+ CE C ++ V CT VMEH+TS GG N+TL LSID GYWRAT S +VL CY+ +AC GG+T + +C GY GPYC+VC++ Y + GF C+KC E N GI+ V+ ++ ++ + YVTS MG G G R+ R +PLQSVKI+I AWQILTQF S+A+VTYP +Y+ FL +D+ NFDL W +S C + MDFH +LL T+ P+ A+L L TY +YR L ++HKH SM LLL F VYSS SS++F+ F CE+L D K YLR+DY IECDS +HK YA FM L+Y +GIPAL+A +LFR+R +L D R D V SI++LW+PY +YYEVIECGRR+ L GV++ + ++AAQIAVTL++AF F V+SE L PY+S D W+ R+GH VV SM+ LLLKVNVS E ASQ++F+IVL+ +H M++ +V ET++ + +
Sbjct: 1056 GALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGG-NITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFFQL 1603 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig952.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig952.3.1 >prot_A-nodosum_M_contig952.3.1 ID=prot_A-nodosum_M_contig952.3.1|Name=mRNA_A-nodosum_M_contig952.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=503bp MEHSTSTGGFNVTLMTLSIDRGYWRATNESTNVLPCYNEDACQGGLTGSRback to top mRNA from alignment at A-nodosum_M_contig952:144187..150851- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig952.3.1 ID=mRNA_A-nodosum_M_contig952.3.1|Name=mRNA_A-nodosum_M_contig952.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6665bp|location=Sequence derived from alignment at A-nodosum_M_contig952:144187..150851- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig952:144187..150851- >mRNA_A-nodosum_M_contig952.3.1 ID=mRNA_A-nodosum_M_contig952.3.1|Name=mRNA_A-nodosum_M_contig952.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1509bp|location=Sequence derived from alignment at A-nodosum_M_contig952:144187..150851- (Ascophyllum nodosum dioecious)back to top |