mRNA_A-nodosum_M_contig9465.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig9465.1.1
Unique NamemRNA_A-nodosum_M_contig9465.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: A0A6H5JUW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW0_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 4.300e-156
Identity = 261/423 (61.70%), Postives = 306/423 (72.34%), Query Frame = 1
Query:  829 GSQLPPRLP*VGRFRESCESEDATCAHGYCNAQVAMDIASRLDIPTPNVMRTLHSTAPCSVSA-RLLDDTIERTHLLAELL--GSHGQD-------RGAAVVYVTLQKTAEEVSQMLVAAGFDARPYHAGLPSTQREEIQDWFMNSPDDASRVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGKRASCQTLVTGVDLPLLRAMVYGATPSPAAVRGLLRTVLGGEGDEVDFNMYDLSQALDTKDLVLKTLLAHVQIRGLVREVTPYFETSDIRLLEAGKAALQDGAGRAKSYLQRESVQLLEMAQEALTRKRAGSKWATLRADDVGNALGLPKTHISRLLSGMSDKGLIEMGKSGKIRARFKVLRRLSSREDAQSLSRGLHDTALELQAREIRRLDTVLQILCKNEGTAVA 2067
            G    P    +  F ++  +            QVA+DIA+RLDIP  NV RT       ++ A R  DD  ER  LLA++L  G H Q         GAAVVYVTLQKTA EV+Q L AAG DARPYHAGLP  QREE QDWFMN+PDD S VVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDG+RASC TLV+  DLP++R+M+YG TPS AAVRGLLR V     DE D N YDLSQ LDTKDLVLKTL+AH+QIRGLVRE+TPYFET+D++LL+AG A L DG   A   + RE V +L MA   L +KRA +KWATLR D+   ALG+P   I+R+LSGMS +GLI +GK GK+RARF+VLRR +SRE AQ+LSR LH  A++LQ RE+ RLDTV++ILC  EGTAV+
Sbjct:  227 GHNFRPDYLRLADFAKAARANARLALTAAATPQVAVDIANRLDIPPSNVNRTPFYRPMLTLGAVRAPDDQEERARLLADILLRGEHQQQGSGTAAGSGAAVVYVTLQKTAVEVAQALAAAGIDARPYHAGLPPLQREETQDWFMNAPDDESPVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGERASCTTLVSAADLPVIRSMIYGGTPSEAAVRGLLRAVFASGDDEADLNFYDLSQMLDTKDLVLKTLVAHLQIRGLVRELTPYFETADVQLLDAGMAILDDGTEEATGDMPREWVAVLGMADAKLKQKRANAKWATLRVDETAGALGVPMQQIARMLSGMSYEGLIALGKPGKVRARFQVLRRPASREQAQALSRDLHAMAMDLQDRELGRLDTVMEILCSQEGTAVS 649          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: D7FZN1_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN1_ECTSI)

HSP 1 Score: 483 bits (1243), Expect = 1.260e-155
Identity = 267/462 (57.79%), Postives = 317/462 (68.61%), Query Frame = 1
Query:  712 HISAVRITREVQQRALLECAKGCESGTVCGRRSPLHQRVGSQLPPRLP*VGRFRESCESEDATCAHGYCNAQVAMDIASRLDIPTPNVMRTLHSTAPCSVSA-RLLDDTIERTHLLAELL--GSHGQD-------RGAAVVYVTLQKTAEEVSQMLVAAGFDARPYHAGLPSTQREEIQDWFMNSPDDASRVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGKRASCQTLVTGVDLPLLRAMVYGATPSPAAVRGLLRTVLGGEGDEVDFNMYDLSQALDTKDLVLKTLLAHVQIRGLVREVTPYFETSDIRLLEAGKAALQDGAGRAKSYLQRESVQLLEMAQEALTRKRAGSKWATLRADDVGNALGLPKTHISRLLSGMSDKGLIEMGKSGKIRARFKVLRRLSSREDAQSLSRGLHDTALELQAREIRRLDTVLQILCKNEGTAVA 2067
            ++S  R   E   R L    KG +        +      G    P    +  F ++  +            +VA+DIA+RLDIP  NV RT       ++ A R  DD  ER  LLA++L  G H Q         GAAVVYVTLQKTA EV+Q L AAG DARPYHAGLP  QREE QDWFMN+PDD S VVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDG+RASC TLV+  DLP+LR+M+YG TPS AAVRGLLR +     DE DFN YDLSQ LDTKDLVLKTL+AH+QIRGLVRE+TPYFET+D++LL+AG A L DG   A   + RE V  L MA   L +KRA +KWATLR D+   ALG+P   I+R+LSGM+ +GLI +GK GK+RARF+VLRR +SRE AQ+LSR LH  A++LQ RE+ RLDTV++ILC  EGTAV+
Sbjct:  182 YVSPERFNNERFVRTL----KGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNRTPFYRPMLTLGAVRAPDDQEERARLLADILLRGEHHQQGRGTAAGSGAAVVYVTLQKTAVEVAQALAAAGIDARPYHAGLPPLQREETQDWFMNAPDDESPVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGERASCTTLVSAADLPVLRSMIYGGTPSEAAVRGLLRAIFASGEDEADFNFYDLSQMLDTKDLVLKTLVAHLQIRGLVRELTPYFETADVQLLDAGMAILDDGTEEAIGDMPREWVAALGMADTKLKQKRANAKWATLRVDETAEALGVPIQQIARMLSGMTYEGLIALGKPGKVRARFQVLRRPASREQAQALSRDLHAMAMDLQDRELGRLDTVMEILCSQEGTAVS 639          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: A0A835Z8G9_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G9_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.280e-73
Identity = 176/444 (39.64%), Postives = 233/444 (52.48%), Query Frame = 1
Query:  925 QVAMDIASRLDIPTPNVMRT-LHSTAPCSVSARLLDDTIERTHLLAELLGSHGQDRGAAVVYVTLQKTAEEVSQMLVAAGFDARPYHAGLPSTQREEIQDWFMNS------------------PDDASRVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGKRASCQTLVTGVDLPLLRAMVYGATPSPAAVRGLLRTVLGGEG---------------------------------------------DEVDFNMYDLSQALDTKDLVLKTLLAHVQIRGLVREVTPYFETSDIRLLEAGKAALQDGAGRAKSYLQRESVQLLEMAQEALTRKRAGSKWATLRADDVGNALGLPKTHISRLLSGMSDKGLIEMGKSGKIRARFKVLRRLSSREDAQSLSRGLHDTALELQAREIRRLDTVLQILCKNEGTAV 2064
            +VA D+ +RL I   +V+RT LH       +AR  D   ER   LA  L +     GA +VY  LQ+TA + + ML AAG  AR YHAGL + +R+++QDWFM                    PDDA RVVVGTIAFGMGLDK +VR V+H NLPRS E   Q+VGRAGRDG+ + C+ LV+  D+P LRAMVY  TP  AAVRGLL T+                                                    VD ++YDL+Q LD ++ VL+TLLAH+Q+ G +RE T YFET  + L  +G               QR    LL   + AL  KR GSKWA +    +   LG+    I R+L  +++ GL+ +G + KIR+RF VL       + Q+L+  LH  ALEL+ RE+ R+D VL +LC + G A+
Sbjct:  265 RVAADMCARLAIAQHDVVRTPLHRAELALRAARAPDALEERVAALAARLRARAP--GATIVYAMLQQTATDAAAMLTAAGIPARAYHAGLRAAERDDVQDWFMAGAGEGDVQGARARGGAGRWPDDA-RVVVGTIAFGMGLDKGDVRYVYHLNLPRSIEGYCQEVGRAGRDGRPSLCEALVSPADVPTLRAMVYSNTPGAAAVRGLLDTMFPSAAAGXXXXXXXXXXXXXXXXAFSXXXXXXXXXXXXXXXXXXXXXXXAPAVDVSLYDLAQRLDAREEVLRTLLAHLQMAGRLRETTSYFETQQVGL--SGGXXXXXXXXXXXXPQQRA---LLAAVEAALGAKRKGSKWADVDVKGMAEQLGVEVLEIPRMLQQLAEAGLVTLGAARKIRSRFHVLDAPRDDTEQQALADALHAQALELEQRELGRIDAVLSLLCSSGGAAI 700          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: A0A833IRD6_9GAMM (RecQ family ATP-dependent DNA helicase n=1 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833IRD6_9GAMM)

HSP 1 Score: 223 bits (569), Expect = 2.700e-59
Identity = 113/181 (62.43%), Postives = 140/181 (77.35%), Query Frame = 2
Query:  386 EQAREVLRTLFGHDDFRDGQEGVVAKLLQGESCAGIFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALGAAGVACAKLDSTLEAQEVRAVYDQIRAGSISLLYVSPERFNNERFLSALRDVRVALFVVDEAHCISEWGHNFRPDYLRLADFARAAKAKTRLALTATATPK 928
            ++ R+ L+  FG D FR GQ  VV  LL G+S A +FPTG GKS+CYQLP  L+     G+TLVVSPLIALMKDQ DAL A G+A  +LDS+L A+E RAV D++RAG++ +LYV+PERFNNERF +A+   R+ALF VDEAHCISEWGHNFRPDYL+LA +AR  +A+  LALTATATP+
Sbjct:    3 DRTRDALQQYFGFDQFRPGQAPVVDHLLAGQSAAAVFPTGGGKSLCYQLPALLLP----GVTLVVSPLIALMKDQIDALAARGIAARRLDSSLSAEEYRAVMDEVRAGTLRILYVAPERFNNERFRAAIARTRIALFAVDEAHCISEWGHNFRPDYLKLAGYARELQAERVLALTATATPQ 179          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: UPI00178740EF (RecQ family ATP-dependent DNA helicase n=1 Tax=Pelagicoccus enzymogenes TaxID=2773457 RepID=UPI00178740EF)

HSP 1 Score: 220 bits (560), Expect = 4.100e-58
Identity = 132/342 (38.60%), Postives = 196/342 (57.31%), Query Frame = 1
Query: 1039 ERTHLLAELLGSHGQDRGAAVVYVTLQKTAEEVSQMLVAAGFDARPYHAGLPSTQREEIQDWFMNSPDDASRVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGKRASCQTLVTGVDLPLLRAMVYGATPSPAAVRGLLRTVLGGEGDEVDFNMYDLSQALDTKDLVLKTLLAHVQIRGLVREVTPYFETSDIRLLEAGKAALQDGAGRAKSYLQRESVQLLEMAQEALTRKRAGSKWATLRADDVGNALGLPKTHISRLLSGMSDKGLIEMGKSGKIRARFKVLRRLSSREDAQSLSRGLHDTALELQAREIRRLDTVLQIL----CKNE 2052
            +R  +L E LG +    G  V+YVTLQKTAEEV++ L  AGF AR YHAG+ S QR EIQDWFM S D    +VV TIAFGMG+DK ++RRV+H+NLP++ E+ +Q+VGRAGRDGK + C+ L +  DL +L   V+G TP+  AV  L+  +L  + DE D +MY LSQ  D + LVL TLL ++++ G+++   P++     + L+     L    G    +L+     LL  A+E  T       W+ L  D    ALG  +  I +  + + + G++E+G SG +R   ++L    SR DA+ +   L       +   +RR+  V+ ++    CK +
Sbjct:  215 QRIQVLKERLGQNAH--GPTVIYVTLQKTAEEVAEALGTAGFSARAYHAGMKSEQRSEIQDWFMASADG---IVVATIAFGMGIDKSDIRRVYHYNLPKTLENYSQEVGRAGRDGKESYCEVLGSDDDLVVLENFVFGDTPTEEAVDSLVAFILR-QKDEFDISMYHLSQDTDIRGLVLGTLLTYLELEGIIKFTAPFYSEYKFKYLQPKANVLAAFKGEPGEFLR----SLLAQAEEKKT-------WSYLNLDTAATALGADRARIVKAFNHLEELGMLEVGVSG-LRQGMRIL----SRPDAERVRASLIGKVKRNEEGNLRRIAQVVGLINHDGCKTQ 534          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: UPI0019848259 (RecQ family ATP-dependent DNA helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019848259)

HSP 1 Score: 218 bits (556), Expect = 1.730e-57
Identity = 146/413 (35.35%), Postives = 216/413 (52.30%), Query Frame = 1
Query:  829 GSQLPPRLP*VGRFRESCESEDATCAHGYCNAQVAMDIASRLDIPTPNVMRTLHSTAPCSVSARLLDDTIERTHLLAELLGSHGQDRGAAVVYVTLQKTAEEVSQMLVAAGFDARPYHAGLPSTQREEIQDWFMNSPDDASRVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGKRASCQTLVTGVDLPLLRAMVYGATPSPAAVRGLLRTVLGGEGDEVDFNMYDLSQALDTKDLVLKTLLAHVQIRGLVREVTPYFETSDIRLLEAGKAALQDGAGRAKSYLQRESVQLLEMAQEALTRKRAGSKWATLRADDVGNALGLPKTHISRLLSGMSDKGLIEMGKSGKIRARFKVLRRLSSREDAQSLSRGLHDTALELQAREIRRLDTVLQILCKNEGTAVA 2067
            G    P    + RF   C +E            V  DI  +  I   + +RT       S+    +  + +   LL  L  +   +RG  +VYVTLQ+TAE+V+  L   GFDAR YHAG+    R  +QDWF  S D A  +VV TIAFGMG+DK N+R V+H+NLP+S E+ +Q++GRAGRDG  A C+ L    D+  L   V+G TPS A+V  L+R VL   G+  D ++YDLS   D K +V++TLL ++++ G + E TP++     + L      L    G  + +L+R    L   A +A         W +L   +    LG P+  I R L   ++K  +E+   G +R R+   RRL S  D   L+  LH+ AL  + REI RL+ VL+++ +++G  V+
Sbjct:  149 GHNFRPDYLKLTRFARECRAERLFALTATATPAVLEDICRQFQIEPAHAVRTGFYRPNLSLRITPVSGSEQDAALLDRLTRN---ERGPTIVYVTLQRTAEQVADRLARRGFDARAYHAGMKDEDRAAVQDWFAGS-DRA--IVVATIAFGMGIDKANIRYVYHYNLPKSLENYSQEIGRAGRDGAAALCELLACSDDINTLENFVFGDTPSLASVSSLVREVLQ-LGEAFDVSLYDLSFRHDIKQIVVRTLLTYLELDGYLEEGTPFYAEYQFKPLVPSAEILAQFEGERQEFLRR----LFSQATKAKI-------WFSLDIANAATTLGQPRDRIVRALDYSAEKQWLELKVEG-VRNRY---RRLKSPPDLTVLATELHEKALLRETREIARLNEVLELV-EHDGCQVS 538          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: UPI001907A010 (RecQ family ATP-dependent DNA helicase n=2 Tax=Pelagicoccus mobilis TaxID=415221 RepID=UPI001907A010)

HSP 1 Score: 218 bits (554), Expect = 2.820e-57
Identity = 126/317 (39.75%), Postives = 184/317 (58.04%), Query Frame = 1
Query: 1090 GAAVVYVTLQKTAEEVSQMLVAAGFDARPYHAGLPSTQREEIQDWFMNSPDDASRVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDGKRASCQTLVTGVDLPLLRAMVYGATPSPAAVRGLLRTVLGGEGDEVDFNMYDLSQALDTKDLVLKTLLAHVQIRGLVREVTPYFETSDIRLLEAGKAALQDGAGRAKSYLQRESVQLLEMAQEALTRKRAGSKWATLRADDVGNALGLPKTHISRLLSGMSDKGLIEMGKSGKIRARFKVLRRLSSREDAQSLSRGLHDTALELQAREIRRLDTVLQIL 2040
            G  VVYVTLQKTAEEV+  LVA GF AR YHAG+ S QR EIQDWFM S +    +VV TIAFGMG+DK ++RRVFHFNLP++ E+ +Q++GRAGRDGK + C+ L +G DL +L   ++G TP+  ++R     +L  E DE D ++Y LSQ  D + LVL TLL ++++ G++    P++     + LE     L    G    +L+R    LL  A E  T       W+ L  D    ALG  +  I +  + + +KG++E+G +G +R   ++L     R+    + R L +     +A  + R   V+++L
Sbjct:  232 GPTVVYVTLQKTAEEVAAQLVADGFSARAYHAGMKSEQRAEIQDWFMASTEG---IVVATIAFGMGIDKSDIRRVFHFNLPKTLENYSQEIGRAGRDGKPSHCEVLGSGEDLVVLENFIFGDTPTEESIRVFASFMLEQE-DEFDISLYQLSQLTDIRPLVLSTLLTYLELEGVIEFTAPFYSEYKFKYLEPKSEVLAAFKGEPGEFLKR----LLAQANEKKT-------WSYLNLDTAAKALGADRNRIVKAFNHLEEKGMLEVGVTG-LRQGMRML----DRQPEIEVVRNLVEKVERNEAGNLERTRNVVELL 528          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: A0A4Q6AZ83_9PROT (ATP-dependent DNA helicase RecQ n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6AZ83_9PROT)

HSP 1 Score: 209 bits (531), Expect = 3.960e-57
Identity = 105/183 (57.38%), Postives = 136/183 (74.32%), Query Frame = 2
Query:  380 TIEQAREVLRTLFGHDDFRDGQEGVVAKLLQGESCAGIFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALGAAGVACAKLDSTLEAQEVRAVYDQIRAGSISLLYVSPERFNNERFLSALRDVRVALFVVDEAHCISEWGHNFRPDYLRLADFARAAKAKTRLALTATATPK 928
            ++ +A+E+L+T FGH++FR GQ  V+ ++L G+S A +FPTG+GKS+CYQLP  L+     GLTLVVSPL+ALMKDQ D+L A G+  A+LDSTL   E +     +R G I +LYV+PERF NERF  A+  + ++LF VDEAHCISEWGHNFRPDYL+L  FA+   AK  LALTATATP+
Sbjct:    4 SVSKAQELLKTYFGHENFRAGQAQVIEQILNGKSSAAVFPTGSGKSLCYQLPALLLP----GLTLVVSPLLALMKDQIDSLLAKGIKAARLDSTLTNDEYQQTMRDVRNGVIKILYVAPERFMNERFRGAMAGINISLFAVDEAHCISEWGHNFRPDYLKLPIFAKTLGAKVVLALTATATPQ 182          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: U2EN26_9GAMM (ATP-dependent DNA helicase RecQ protein n=2 Tax=Salinisphaera TaxID=180541 RepID=U2EN26_9GAMM)

HSP 1 Score: 217 bits (553), Expect = 4.220e-57
Identity = 110/180 (61.11%), Postives = 136/180 (75.56%), Query Frame = 2
Query:  386 EQAREVLRTLFGHDDFRDGQEGVVAKLLQGESCAGIFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALGAAGVACAKLDSTLEAQEVRAVYDQIRAGSISLLYVSPERFNNERFLSALRDVRVALFVVDEAHCISEWGHNFRPDYLRLADFARAAKAKTRLALTATATP 925
            +Q   +L+  FG++ F+ GQ  V+  LL G S A +FPTG GKS+CYQLP   +     G+TLVVSPLIALMKDQ DAL A G+A  +LDS+L+A+  RAV D++R+G + LLYV+PERFNNERF   L  +RV+LF VDEAHCISEWGHNFRPDYL+L  FA+AAKA+  LALTATATP
Sbjct:    3 DQPDRLLKAYFGYERFQPGQREVIEHLLAGRSAAAVFPTGGGKSLCYQLPALALP----GITLVVSPLIALMKDQIDALSARGIAAQRLDSSLDAEGYRAVMDRLRSGELRLLYVAPERFNNERFRQTLSQLRVSLFAVDEAHCISEWGHNFRPDYLKLVGFAKAAKAERLLALTATATP 178          
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Match: UPI000AB9CF76 (RecQ family ATP-dependent DNA helicase n=3 Tax=Candidatus Thiosymbion oneisti TaxID=589554 RepID=UPI000AB9CF76)

HSP 1 Score: 217 bits (553), Expect = 5.110e-57
Identity = 113/175 (64.57%), Postives = 133/175 (76.00%), Query Frame = 2
Query:  404 LRTLFGHDDFRDGQEGVVAKLLQGESCAGIFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALGAAGVACAKLDSTLEAQEVRAVYDQIRAGSISLLYVSPERFNNERFLSALRDVRVALFVVDEAHCISEWGHNFRPDYLRLADFARAAKAKTRLALTATATPK 928
            L+  FG + FR GQE VVA L+ G S A +FPTG GKS+CYQLP  L+     GLTLVVSPLIALMKDQ DAL   G+A A+LDSTL+A   R V +Q+R G++ LLYV+PERFNNERF  A+  VR++LF VDEAHCISEWGHNFRPDYL+LA FARA  A+  LALTATAT +
Sbjct:    9 LKRHFGFETFRPGQEAVVAHLMAGHSAAAVFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALTRRGIAAARLDSTLDAAAHRTVMEQVRKGTLRLLYVAPERFNNERFREAITPVRISLFAVDEAHCISEWGHNFRPDYLKLAGFARACGAERVLALTATATER 179          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9465.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUW0_9PHAE4.300e-15661.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZN1_ECTSI1.260e-15557.79DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835Z8G9_9STRA1.280e-7339.64DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A833IRD6_9GAMM2.700e-5962.43RecQ family ATP-dependent DNA helicase n=1 Tax=Alk... [more]
UPI00178740EF4.100e-5838.60RecQ family ATP-dependent DNA helicase n=1 Tax=Pel... [more]
UPI00198482591.730e-5735.35RecQ family ATP-dependent DNA helicase n=1 Tax=Pla... [more]
UPI001907A0102.820e-5739.75RecQ family ATP-dependent DNA helicase n=2 Tax=Pel... [more]
A0A4Q6AZ83_9PROT3.960e-5757.38ATP-dependent DNA helicase RecQ n=1 Tax=Proteobact... [more]
U2EN26_9GAMM4.220e-5761.11ATP-dependent DNA helicase RecQ protein n=2 Tax=Sa... [more]
UPI000AB9CF765.110e-5764.57RecQ family ATP-dependent DNA helicase n=3 Tax=Can... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9465contigA-nodosum_M_contig9465:7364..18667 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FZN1
PFAMsDEAD,Helicase_C,RecQ_Zn_bind
Model size2527
Max annot lvl2759|Eukaryota
KEGG koko:K03654
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
Exons14
Evalue3.74e-160
EggNOG OGsCOG0514@1|root,KOG0351@2759|Eukaryota
EC3.6.4.12
Descriptionfour-way junction helicase activity
Cds size1308
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9465.1.1prot_A-nodosum_M_contig9465.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig9465 14513..18381 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870444.4687607-UTR-A-nodosum_M_contig9465:7363..78081680870444.4687607-UTR-A-nodosum_M_contig9465:7363..7808Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9465 7364..7808 +
1680870444.543238-UTR-A-nodosum_M_contig9465:10788..109531680870444.543238-UTR-A-nodosum_M_contig9465:10788..10953Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9465 10789..10953 +
1680870444.5573308-UTR-A-nodosum_M_contig9465:11729..118161680870444.5573308-UTR-A-nodosum_M_contig9465:11729..11816Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9465 11730..11816 +
1680870444.5686617-UTR-A-nodosum_M_contig9465:12634..127631680870444.5686617-UTR-A-nodosum_M_contig9465:12634..12763Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9465 12635..12763 +
1680870444.5859013-UTR-A-nodosum_M_contig9465:14117..142181680870444.5859013-UTR-A-nodosum_M_contig9465:14117..14218Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9465 14118..14218 +
1680870444.6042914-UTR-A-nodosum_M_contig9465:14506..145121680870444.6042914-UTR-A-nodosum_M_contig9465:14506..14512Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9465 14507..14512 +
1680870444.9371793-UTR-A-nodosum_M_contig9465:18381..186671680870444.9371793-UTR-A-nodosum_M_contig9465:18381..18667Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9465 18382..18667 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870444.6875668-CDS-A-nodosum_M_contig9465:14512..147881680870444.6875668-CDS-A-nodosum_M_contig9465:14512..14788Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 14513..14788 +
1680870444.8256464-CDS-A-nodosum_M_contig9465:15260..154101680870444.8256464-CDS-A-nodosum_M_contig9465:15260..15410Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 15261..15410 +
1680870444.8411012-CDS-A-nodosum_M_contig9465:15623..158121680870444.8411012-CDS-A-nodosum_M_contig9465:15623..15812Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 15624..15812 +
1680870444.8549001-CDS-A-nodosum_M_contig9465:16085..162581680870444.8549001-CDS-A-nodosum_M_contig9465:16085..16258Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 16086..16258 +
1680870444.8686078-CDS-A-nodosum_M_contig9465:16746..168641680870444.8686078-CDS-A-nodosum_M_contig9465:16746..16864Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 16747..16864 +
1680870444.886465-CDS-A-nodosum_M_contig9465:17129..172101680870444.886465-CDS-A-nodosum_M_contig9465:17129..17210Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 17130..17210 +
1680870444.8998406-CDS-A-nodosum_M_contig9465:17622..177271680870444.8998406-CDS-A-nodosum_M_contig9465:17622..17727Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 17623..17727 +
1680870444.912762-CDS-A-nodosum_M_contig9465:17915..180851680870444.912762-CDS-A-nodosum_M_contig9465:17915..18085Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 17916..18085 +
1680870444.9262962-CDS-A-nodosum_M_contig9465:18335..183811680870444.9262962-CDS-A-nodosum_M_contig9465:18335..18381Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9465 18336..18381 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig9465.1.1

>prot_A-nodosum_M_contig9465.1.1 ID=prot_A-nodosum_M_contig9465.1.1|Name=mRNA_A-nodosum_M_contig9465.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=436bp
MDIASRLDIPTPNVMRTLHSTAPCSVSARLLDDTIERTHLLAELLGSHGQ
DRGAAVVYVTLQKTAEEVSQMLVAAGFDARPYHAGLPSTQREEIQDWFMN
SPDDASRVVVGTIAFGMGLDKKNVRRVFHFNLPRSPEDLAQQVGRAGRDG
KRASCQTLVTGVDLPLLRAMVYGATPSPAAVRGLLRTVLGGEGDEVDFNM
YDLSQALDTKDLVLKTLLAHVQIRGLVREVTPYFETSDIRLLEAGKAALQ
DGAGRAKSYLQRESVQLLEMAQEALTRKRAGSKWATLRADDVGNALGLPK
THISRLLSGMSDKGLIEMGKSGKIRARFKVLRRLSSREDAQSLSRGLHDT
ALELQAREIRRLDTVLQILCKNEGTAVAPASLLTLATPPRQWPKPYRTKT
LNLLRVTANVVSSSRCWLQRRCQRRRSTSSGVWVC*
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mRNA from alignment at A-nodosum_M_contig9465:7364..18667+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig9465.1.1 ID=mRNA_A-nodosum_M_contig9465.1.1|Name=mRNA_A-nodosum_M_contig9465.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11304bp|location=Sequence derived from alignment at A-nodosum_M_contig9465:7364..18667+ (Ascophyllum nodosum dioecious)
ATCTAGCCTCCAGAGGATTGAAGGAGATATGGCCCCTAGAAGGTTACATA TGGTATCGACAGCGCTGGTACCTCTGCTAAGCTGTGTAGATGGCAAGTTA GCTTGGCAGCAGCAGTTCTCACTCATTTTCGAGCACGCGGGTAGTTCCGC CGCATTTTCCAAGCCGAGAAGGCACCATTTGGATCGGCAACCAGGTCCGC GCAGGAGAAGCTGTGGCGGCAGCATTTTTCTGAGGAAGCAACTGGAGGGA TGTCATCGGTATTCTAGTAAAGGCAGAAGCTGGGGTGCGAATTCAGTGTA TATGCCACTACGGGAGTCTTCCTCCGGTGGACCCTCGACCGAACGCTTGG TATCTCCAACAACACAAGAGGGGAGGCTAACGATAGAGCAGGCCAGGGAA GTGTTGCGAACACTCTTTGGGCACGACGACTTCCGCGATGGTCAAGTAAG CCAATGAATCGAAGTTTAGGATAACGGCATGCTGTCCACTACGTAGTTTC GTGGATGAAAAAAGTAGACGTTGATGTACCTTCATGAATCGCTTCTAAAG CTTGGTAGCATGGTTGTTTGTATCCAAAAAGATTATAACGGTGAGTTTCT CCCCGACATAAGTGGACCCTAAACCCGAATAAATGCCATAAAGACTTTTT GTCATTAGGCCACCTATGCTGTTAGAAAAATGATATCAGAAAACGGCTTC TCTGATAATCAATTTTCCACCAGGATTTTTCCAAGCACCCGTTCTTAGGG CCTGTATTAACGATGTTCGGAAAATCAAAATCGGAAAAAATCAAAATCAA AATTGGGTTCTGATTGGCCGAGGTTCAAAACCTTCTGACTACGCCAGTTT ATTTTTTGGAAATCGCTGCCAAACCAAAGAAGTCCCAGGGACTTCATGTT TATTTTCGGAAAATAAACATTGGAGGTCACCTGATCGAAGGCTTTTCCGA ATGCTACACGCCAGGACGCCACAGCACAGCAGAGTTACAACAGCACGTAG ACAGACTGAACCGCCACACAACACACAACTTCTGCTGGCATGGCCCGCCA ACGGTCCCACGGCGAGGAGCAACCGTTAATTCTACCAGCTGGTGGTGGGG ACAGGAGCACGGAGTGGTGCTGGACTTTGTTGACGCCGATACAACCCAAA AGGCGACGGGTGCTACCTCAGCACAGATAGACTTCGTATGTGTAATATGT ACCAGTAATAGTTCTACTGCTGCTGTTGCCTCTCTATCTCTCCTCTCTCT CTCTGTGTCTTTGTTCAGGGTACCCTCACAACGATATCGCCATTTATCTA CCTCCTTTTTATTTTTTTCAGCTACAACGAAGTGTTTGTACAAACGGCAT TTATTCCCTACTACCTCAGCACAGATATAGACTTCGTATGTGTACTATGT ACCAGTAGTTCTGCTGCTGCTGTTGCTATCTTCCTCTCTCTCTCTCTCTG TGTCTTTGTTCAGAGTGCCTACACAATATCGCCATTTCTGTACCTACCCT TTTATTTTTTCGCAGCTACAACGAAGTGTTTAGTACAAACACATTTATTG CCTACTTCCCTTCTGGCAAGTATTTTTCGATGTGACCACGGCCTGATTCT TTGCACGCCGTTATATGCGACAATTTGACATTTTTTACCGGGGGATGCTC AGAAGGTCTAGGCGCCTTCAGATTTTTTTAAAAATAACAACAGCACCACA GTCACCACCACCAACATTAGAAGCGAGGTAGGGTACTGTCCATCCGCACG TCGAAAGCACGGAAGGTAAACTATATAAAAGGTCGAAGTCCATACACGTT GTGAACTGTCCATTACGGTGAGGTCATCAGTACAGCAGTGGTAGTAGTAC TGTGAGGTGTTTGTTCCCTTGGAGTTTTCCAGGATTTTTCCAACGCCACA AGAGGTTTTCCATATTGGCGGCGTAAACAGCTCCGGACAGTCCGTTCGAG TATTTTCCGTTAACATGGCTCGCAGTGTTTTTTAAGAAATCAAACGTTAA TTTTTTTGATTTTTGATTTTCCGATTTTGATTTTCCGAACATCGTTAATA CAGGCCCTTATCTTCACAGCTTATCAAAAAAAAAAAAAAAAAAGTAGTTT TCACCGGCCGGTTACAAGGAGGCGTCTGCTTGTTGTACTCTATTGGAGGG TCTTGTATACACAAACAGTCTGCTGTATGTTTTAGATAATGTCACCAACA ACACGTCGCCAAGGACTGCGGCATATAGGCCCATTGCCTACCTTGTGCAC CTACTTACAACCTTGGCGTAGTACAGCACATGATCTTCGATCGTTTCGGA CTTGTACAACCACACAACAAATGCATCTCGAAGGCCGCAACGTGCCATGC AGACAGTACTGTGCAAGCGGCCTCTAACAACATATAATATGTACCGAGAA CGTGACTGCTGTACGATACACATTGCAATGGCTACAGATGTGTTCTCGAG CCACGATTGCATCTTCCACGTGGAACAAGTACCAACTGATTGACATTTTT TATTCTCTGCTTGCGGCGTCAATATGCTGCCACCGTGGCCGTTGCCGCTG CGACACAGTCATTCATGCCTGTACACGAGGTCTGTCTTTGAACGAAAAAA TTTGAATTGCGACACAGTAGTCATCCATGCCTGTACACGAGGATTGTCTT TTGAGGAAATTTTTTGATTTTTTGCGTCCGTTCGTCCGGGGCACGCCCAC GACACATAGCGAAGGACTGCTGCTGCGGGTAGGCGCATTACCTTGTGCAC CTACTTACAACCGCGGCGTGGTACAGCACGTGGTCTTGAATCGTTTGGGG CTTGCACGGCCACACGAATGCAGCTCGAAGGCCGCAATTTACCATGCAAA CAGCTCTGCAACATCATCTAATAATCTGTACCGAGGACGTAACTGCTGCA CGACGCGCGCTTCAAAGGCTACATACAGATATTTTCTCGGGACACGACTG TGTCTTCCTCGTCGAGTAACCCTAGAACGAGTGCCAACTGATTGGTATTT TTTATTCTCTGCTTGCGGCGTCGATATGCTGCCACCGCGACCGTCACCGC TGCGACACAGTCATCCGGTACAAATTGAAATCATTTTCTGATAAAATTTT CTGATAGCCCCATCCTGTTAGAAAATCAGGATTTTCTAAAAGGATGGGGT TATCAGAAAATTTTATTAGAAAATGTCTTATTAGAAAAGGCCTTTTCTGA TAGCATAAGAAGCGGATTTTTGGTCCCATATCAGAAAAGCCGTTTTCTGA TAACATTTTCTAACAGCATAAGAAGTGGCCTTACAGTCAGTTTTCTCCCC GACATAATTGCTGACCCTAAACCCAAATAAATGCCATGAAGACTTTTTGT CATTGCAGTCAGTACAGCCTAAGTTCTCACCTAAACGTTTCAACTTAGTG CCAACCCCGTTGTTGTTTATGTCAGGAGGGAGTGGTGGCGAAGCTCCTGC AGGGAGAATCCTGCGCAGGAATCTTCCCAACTGGCGCAGGGAAGTCAATT TGTTATCAACTCCCCGGAACGCTCATGGCTAGGCAGGGCCTAGGGCTGAC GCTCGTCGTATCTCCTCTCATTGCCCTAATGAAAGACCAGGTCCGAGACC GGCACGCCATATTTTCGTCGTTGTTGGCGGGAGGGTTTATCTTCATTCAG ATCTCTTCTCCATTGTCCTCAAGAAATAAATTGATGAAACACCATCGCAT CCTAGACCCCATGTAACAAATTGAGCTGCAATCCAAGCTCGTCGTGTCTT TTGTCTTTGATTTGTCTCGTGTGTAAGTGTATGGTAAAGTATAATGGTGG GTTTCTCCCCGGTATTATACTGTTGATGCAATGTTACTACCATCGGGGAA CCCGATTAAATGCCATGAAGAGGTGTTGTCTTTGCAGCCTATGATCCCAC CTAAACGTTTTGACATTTTTTTCCCCTCACTGGGGGGTGCTCAGAAGGTC TAGACGCGTTCAGATTTGTCTTTAAACAGCTCTATTTGTCGTGCAGTACC TCATTGATCATTAGTTTTAGCAGATTGGGCTCTACCCATGTAAGATATGG TTGTCAATACAACTTGTGGTCAGCTGGGAATTTTTCGCTGTCCCCATTCG CGCCTGGGAATTTGATTTTGCTAGCCAGATTCGGCTGTCTCCGTCCCGCG TCAAATATGGGCTTCCATTTTAAACTGAAACCCATGATCGGCTTGTCCGC CTTGATCGTGTGTCCTCCGCTGGTCAGCACCTCGGCAGCGCGCTCGTACG TACCATACCGAGAGGGTAAACGTCGCATTTTATCGATAAGATCCATCCAC AGGATCTCCTCCGCTTTCCCGTGAGATGTTCCACTTACCACGCTTTCCTT TTCCTGGTGCGGGTAGACTGACGCGCTGGGTGCCGCGGGTGTCGCATGCG CCAAGCTGGACTCTACGCTCGAGGCGCAGGAGGTTCGCGCCGTCTATGAT CAGGCAAGTTCGCCCAATTGTACGGAAATACAGTTGTCCACGAGCTTTTG AGGTTCCCGGTCTTCTTGATGAAGTCGTGCTTCCGCTCTCGTGTATGTAA TGTATGGTCACACCTATAGCAAGAGTATGGATCAACCGGGTAAGGTTGCC AATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATATTTCTCTGTCCG CGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAGCAGTCCCGTC CCGCGTCAGCCTGCTCAGCTCCATGCTCAAGCTGAATATGGTGCTTACTA ACGGGATTGATTCCTCCCGAGTTCCGCGGCGGCGTCATGTGGAGCAGTAG TTGCTATCGTTCTAGTTGATGATGAAATTCTCACTTTCAGCGTACTGTGC TTGCAACTGAAGAACTACCATAGCACAACTCAGTCAGCCATAGACCTGCT GAATGCTGATCCCGCTCGTGGTCTCAGAAAGACACGACGGTTAACGAGTC ACATCTTCTTGATTACCCGCTACGCCAATCACCAGGGATCCGAAGTCGCG ACAAAACCATCAGGTCCGGCCACCCGGTAGCAGTTAAGGTTCTACGCACG TGACGACGATATGCTTGGGTACGAACTACAGCGTCCCAAGTGTTTCGTGC CGGTGCCATCCGCTGTCCGCCGATGTAAAAGCACGTCGTGTCCCGTCCAG GGCTCAACTCTCCGAAGTTTGTTGCAGCAATTTTCAAGCGCCGTGCGCTG CTCGTGTCAAACGCCGTTGGCTGTTTATCTGCACTCCCTTTGTAATGTGA TGGGTAAATATCACCTGGCAGATTCGGGCGGGCAGCATATCTCTGCTGTA CGTATCACCCGAGAGGTTCAACAACGAGCGCTTCTTGAGTGCGCTAAGGG ATGTGAGAGTGGCACTGTTTGTGGTCGACGAAGCCCATTGCATCAGCGAG GTATGTGCGCGCAATCTACCACGGGTTTTTTCTCCGCGTTAGTTACGCGA CAAGCTAGGAAAATATTAAAACACCCGAGAGCATCGCATCAAGGGTGTGC GTGCAGGGTATCGGTTAACCGAAAGTCCGCTAAAGGATCGATTGACTGGG GAAAGAGTTGAGGGAGTGAGGCCTACTGTATACGATCTGGAACACGAAAT GCGTACGGAGTTCCATAATCGTGGACGCGTGGCTGGTTCTGCGTCTCCGT TTTTACTTGCGTAGATGACGTCGTTTGAATGTTGCCCTCTTACTGCTTTT CGTTTCTCGGGGCCTTGGCAGATTCTCGGCCGATCGATGCATTAGCGTTA TTTTCTTATCTTGTCACCTAAAGCAGCCCACCATTGCTACTTACATCGGC GGGCAACGAACACGCTTACGAGTTTCTATGCGTAGGAGACTTGTCATGAT GTCTATCCACGGCGTGTCGTCTAATGCTTGGAGAAACAAAGGTTTGGTCC CAAAAGACCCTTGGCTAGCTGGATTGTGTCGAGCATTAAAACTCACGACT ACCTGCTTGACGCTAAAGCTAAAAGTCATGTCGTGGAAAACGAGGCGCCG CTTGGTGGCAGTGAGACAGGGCGGGTGTGAAGCTTAGGGCTCTAGAGCCG CCAACGACGTTGAAGGCTCAAGATTGGGCAATTTCTGCGGACGGCATCTG CCGCAACCTTGAGCCCTTCTCGATCATTGGCGTTTAGAGAGCCCTGTGCT CAACACCCGCCCCGATGGTGACCGCCTCGCTGCCACCTCGCCTTCCATGG TACGCCTTCTTCGTGGGTGATCTCAGCAGTTAGCCTTGGGTTGGAATGCT CGACAGCATCACGCTCGCTAAGGGTCATTGAACCTCACCTGTGTTCCTCC AAAGCACCCGACGGCACGCTACCGCGAGGCGTCACGGCTCTCGTGTGCGC AAAACCCCGGTAGCGTATTTGCAGCTCTCCGACCATGTGAGGTCGGAGAG GTCGGACGATAAGGCGTAAATATCATATGTGAGGTTCAGGTATACCGATT TCCCGCGAGTTCGCTAAGGGTCGAAGAAACAGAACAATGAATGAAATGTA TTTACAAGGAGTTGCAGAACCAGCTACGCGTCAGTACATACTCTATAATA TTATAACCGCGATACGGCTGCAACGAAACTCTACAGACGGATATAACCCC CTGTATAAACATGTCCCTGGAGCCCGCTCGATCTACTTCGTAGTTGCTCC GTAACTTGTAAAACATTTCTCCCCGGTCAATCGTCATCAAAATCGCACTG TACCGGCCCCTCTTGATTTCCGAATGGCGCTTTTCTCACCCTTTCCTTGT TAAGTGGGGTCACAACTTCCGCCCCGACTACCTTAGGTTGGCAGATTTCG CGAGAGCTGCGAAAGCGAAGACGCGACTTGCGCTCACGGCTACTGCAACG CCCAAGTGCGCCGCCCGCGATTGCTACAGCATGCCCGTGAAATGCGCCAT CTTCTTGTTCGCCGCTATTAAGTGCAGGATCGTGTTTGAAATGCAGCTCC ACATGAAACGTGCCTCGTCAGCTGCTGTTCATCTACCCTTCCGTAGGGTA CAACTTTGACAGATTTTACGTGTCGTATTTCCCGACCGTGACTCACTTCG GAGATGGCTCGCATTGCCATGAAGTGACACGTCTCAAGTATCTCATGTAC CACGCTCGTGCCTCGTATTATCTTCTTCCATTTCCTGGTTCAGGTGGCCA TGGACATCGCAAGTCGGCTCGATATCCCAACACCAAACGTCATGAGAACA CTGCATTCTACCGCCCCATGCTCCGTCTCGGCGCGATTGCTCGACGATAC TATCGAGCGCACGCATCTGCTCGCCGAGCTTTtgGGGAGCCACGGCCAGG ACAGAGGGGCGGCGGTGGTCTACGTGACTCTTCAAAAGACCGCGGAGGAG GTCTCGCAAATGCTAGTCGCGGCAGGTTTTGACGCTCGACCTTACCACGC AGGCTTGCCATCTACTCAGCGGGAGGTGCGTTCGTGGTGTGAGTATGATC AACCCCTTCGACTGGAGTCACCTTCAACCGCCCCCGGACCAATACCACAA GATTTTCTTGAAGGTGTACGATACAGTCAAATGTTTTCCGGGATGCTTGT GTCCTTTGCTGGGTGCTGATACATTGCGCGGTTTTGCAGCCACGAAGGAG ATCGTCGGACGTCAGTCGAAGCTGTGGCGGTACACGCCACAATACACCTA TTTATTGCGCATCGTAAACGTGATGGAACGCCATGCAGCTCGTTACCACT GGACACCTTCTCCTATATGCCGCGGCGTTTTTTCATGCGATCGTTTGCTT GTACTTTCTGTTTTCACTTCAACCAAAGTCTGCTTGACGGATGACTCGGT AGTTGTAGGATTCACATCCCAAACCCGACTGCAACCCTGAGGCTCAACAA TCCCAGCTGGCTGTGCACCCGTCGCGCTGAACGGGTTTCGCTCTCAGGAG ATCCAAGACTGGTTCATGAACTCGCCGGATGATGCCTCGCGCGTGGTGGT GGGAACAATTGCCTTCGGCATGGGTTTGGACAAGAAGAACGTTCGACGTG TCTTCCATTTCAATCTGCCACGGTCACCAGAGGACCTGGCGCAGCAGGCG AGTTCGATGGCTGAATCATGAGATGCTTTGTCGGCGAAGCATATCTGATA CTAAGTGTGGTCAAATTGATCGACTCAGCGCCACCTCTTCTGCGGCGAGG TGCAGTGCTGTACTCCATTTGCATGAAAGTCAGGGGCGATGTAGATGTCC TGCCCACCCGATGATGATGAGCCGGTTGCCCCCTCTCGATGGCCCATGGC TTGGAAGCAGGTTGGCAGAGCAGGGAGAGACGGGAAACGCGCTTCTTGTC AAACTCTGGTGACGGGCGTTGATCTcCCTCTGCTCCGCGCAATGGTTTac GGGGCGACGCCCAGCCCGGCTGCCGTGAGAGGCTTGCTGCGGACCGTGCT TGGAGGAGAGGGCGATGAGGTCGACTTCAATATGTACGATCTTTCCCAGG CGAGCTTCGTGCGGTGAAAGGCTGGCTCACACCTCGAGTCGTTGCAGAAA CGTGGCTCAGCGCGGCCATGTGTGACTGGATGTGGGCAAAACCGACTTCA AGGCGTTTTTGCCCCACGTATACTGGAGCGCAGAGGGAGAGAGAGGAACT GACCCGTCCGCCTACACATATTAGAATCCGCTCGACATTATCGAGTGATA GAAAACTCGATTCCGTCCGAAAACCCGCGTTGCTATTTTCCGTCGTTCGT CGTTCTCAACTATCTGCGCCAGGCTTTGGACACCAAAGACTTGGTGCTAA AGACCCTCCTCGCGCACGTCCAGATCAGGGGCCTCGTGAGAGAGGTTACT CCTTATTTCGAGACGTCCGATATCCGGCTGCTCGAGGCGGGCAAGGCTGC TCTACAGGACGGAGCAGGACGTGCGAAGAGTTATCTACAAAGAGAGTGAG TTTTTCGTGCTCTACTTAGGCTGAGGGATATTTTTGTTAGCACGGCGTCG TGACCTTTCGATGCCTGATTCAACACGTGCGTTAGTCAAAATCCGATGGG TTGAGGGCCGCTGTTGATCGGCACAAATGCGTTAGAGTCAAGATTTCCAC CCTCAAGTGTCTGACGCTTACTGAATCCTCCATAACGTGGAAGCGTATTG CCGACGATTTACTTGTTTACCTTACAGGGATCTTGCCAGTGTCGCATATA ATCTGTTGGCGTGGCGGATTGTCCCCGGGCGGAGCGTCGCTCTGTTGCTA CTCGGTTTCCTCGAAGCTGACCTACCGAGCAGTCTGTGCGCCTGTTCCTT CTTCGTCGGTTATCGTTGCTTACGACTGCAAAAACATGCTCAAACAGCTG CGCTAAGGCCGAAACCCGGCATTCAAGACCCGAGCCCGACCATCCTAATT TCCCGTTCTTTGTTGTAAATCTATGGATTTAAGGTCTGTGCAGCTGTTGG AGATGGCCCAAGAAGCGCTGACACGAAAGCGAGCCGGGTCTAAGTGGGCA ACACTACGTGCGGACGACGTGGGCAACGCGCTGGGCCTGCCCAAAACTCA TGTACGATGTGCTTTTGAGATTGCGCAAGGTTTGAGGCGGCCTGCCTGCA TTTTGGCCGGAGCGCAGTACAACGCGCAGACGTTTGTCCTCGTTGCTCCT TTGGAGCAAGGACTGGGCGGAAAATACAGTAGACGTTGTGGTCATGGTGG CGATCAACCCCATTAGAACCTTCGACCAATAATCAATGCTTGTTATTTAT CCCAAGTGCGCACAATATAGATGCCCCTTTGCTTCCGTCCTCTCATGATT TACCTCTGCCCAGTAGATTTCGCGTCTGCTGTCGGGCATGTCGGATAAGG GGTTGATCGAAATGGGCAAGTCTGGCAAGATCAGAGCCAGGTTCAAGGTG CGAACTAGAGCATGAGTGTGAAGGTTCATTTGTGCTTTGATTCAAATAAT TCCGGAATATTTGGCAAGAAGATGAACACTCGTCTTACGAAGGGCGGGTG TGTTACTAGCTACCCAGCGCGCCGTATTATACTGTCGCCAACCGTATTTC TGCACAGTTTGTTAGATGGTGTTGAACATCCGTCTTTTGACACATTGCCC AAAAAACTGCTTCGTGAGTTCGATTATCAATTTGACGTTAACCCCGAGGC TTACCCCCTGGAACTAGGGCTACTCGTACCTACACTCCAATAGGCTCCAT CTACATCAGCCTTGCGACGACAGTATTCCTCTGCGCTTCTCCACGCTATT GTTGATAATAGTCTTGAACAATCGTCCCTCGTTGGACAATAAATGCATCA CTGCGGCAGGTGCTGCGTCGGCTGTCCAGCCGGGAGGATGCGCAATCCTT ATCTCGCGGTCTGCACGACACGGCGCTGGAGCTGCAAGCGCGCGAGATCC GCAGGCTTGACACGGTGAGGGGAGAAGGAGCCTCACCGACGTATTATAAT TGATCATATCTCCTCTGACGGCTGATGCGAGTGTCAACTTCTTCGCGAGT CGTGCCATGAGCGTCCCGAAAGTATTAAGAGGCGTTACGAAGTTTATCGT CGTGTGAACCTGCACCCGTCCCTGACCTCCCGGACCGTTTGTGCTGACGC AGGTTTTGCAGATACTCTGCAAGAACGAAGGAACGGCTGTAGCTCCGGCC TCTCTACTTACTTTGGCGACTCCGCCGAGACAGTGGCCGAAGCCGTACAG AACGAAAACGCTGAACCTGCTTCGCGTGACAGCGAACGTGGTCTCCTCTT CCCGTTGCTGGCTCCAACGGAGGTGAGCTGTTCCGTGCAGTCTCTCATCG TATTGGTATTACGATAGTCCATAGTACTTGTGCCGGACTTTTCGATGGAA CGGCAGACCGCGCGTCGCAAGACGTTACGCGTCTACCAGGCTGATTTGCC CGACTTGGGCGTACGGAGGCTAGTCCCTCGAGCGATTTAGTATACCAGGC TCTCTTTTGATACCGTCGGCGAGGCGTGGAGGCTCGTTTATGTCATTCAT CGATTCGTTTCGTATCTAATAGGTGTCAGAGGCGAAGATCGACGAGCTCT GGCGTCTGGGTGTGCTGAATTTTCTCCAGGACGGTTCTGAAGACGGGGAT GGGGATGGGCGAGTCATCCCTTGCGACGATCCTACCTATTGGCACGATTC GCCGCTGGCATCAAGAGCCCTCGAATTGGGAAGCTAAAACTTTCGCTGCT TAGCTCTTTTGGGTGTTGCATGTACTGCCCTTCCCGGCACTGATGGCTCG GGCCGAGGCGGCCGTAGCTGCCGCTAGGACGCTCAGCCGGTGACGTTTCA GGCACTCCCGAGGGCACGCGTTGCGGTACGCCGAGCGCGAAAAAATGTTT GGGC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig9465:7364..18667+

>mRNA_A-nodosum_M_contig9465.1.1 ID=mRNA_A-nodosum_M_contig9465.1.1|Name=mRNA_A-nodosum_M_contig9465.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1308bp|location=Sequence derived from alignment at A-nodosum_M_contig9465:7364..18667+ (Ascophyllum nodosum dioecious)
ATGGACATCGCAAGTCGGCTCGATATCCCAACACCAAACGTCATGAGAAC
ACTGCATTCTACCGCCCCATGCTCCGTCTCGGCGCGATTGCTCGACGATA
CTATCGAGCGCACGCATCTGCTCGCCGAGCTTTtgGGGAGCCACGGCCAG
GACAGAGGGGCGGCGGTGGTCTACGTGACTCTTCAAAAGACCGCGGAGGA
GGTCTCGCAAATGCTAGTCGCGGCAGGTTTTGACGCTCGACCTTACCACG
CAGGCTTGCCATCTACTCAGCGGGAGGAGATCCAAGACTGGTTCATGAAC
TCGCCGGATGATGCCTCGCGCGTGGTGGTGGGAACAATTGCCTTCGGCAT
GGGTTTGGACAAGAAGAACGTTCGACGTGTCTTCCATTTCAATCTGCCAC
GGTCACCAGAGGACCTGGCGCAGCAGGTTGGCAGAGCAGGGAGAGACGGG
AAACGCGCTTCTTGTCAAACTCTGGTGACGGGCGTTGATCTcCCTCTGCT
CCGCGCAATGGTTTacGGGGCGACGCCCAGCCCGGCTGCCGTGAGAGGCT
TGCTGCGGACCGTGCTTGGAGGAGAGGGCGATGAGGTCGACTTCAATATG
TACGATCTTTCCCAGGCTTTGGACACCAAAGACTTGGTGCTAAAGACCCT
CCTCGCGCACGTCCAGATCAGGGGCCTCGTGAGAGAGGTTACTCCTTATT
TCGAGACGTCCGATATCCGGCTGCTCGAGGCGGGCAAGGCTGCTCTACAG
GACGGAGCAGGACGTGCGAAGAGTTATCTACAAAGAGAGTCTGTGCAGCT
GTTGGAGATGGCCCAAGAAGCGCTGACACGAAAGCGAGCCGGGTCTAAGT
GGGCAACACTACGTGCGGACGACGTGGGCAACGCGCTGGGCCTGCCCAAA
ACTCATATTTCGCGTCTGCTGTCGGGCATGTCGGATAAGGGGTTGATCGA
AATGGGCAAGTCTGGCAAGATCAGAGCCAGGTTCAAGGTGCTGCGTCGGC
TGTCCAGCCGGGAGGATGCGCAATCCTTATCTCGCGGTCTGCACGACACG
GCGCTGGAGCTGCAAGCGCGCGAGATCCGCAGGCTTGACACGGTTTTGCA
GATACTCTGCAAGAACGAAGGAACGGCTGTAGCTCCGGCCTCTCTACTTA
CTTTGGCGACTCCGCCGAGACAGTGGCCGAAGCCGTACAGAACGAAAACG
CTGAACCTGCTTCGCGTGACAGCGAACGTGGTCTCCTCTTCCCGTTGCTG
GCTCCAACGGAGGTGTCAGAGGCGAAGATCGACGAGCTCTGGCGTCTGGG
TGTGCTGA
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