mRNA_A-nodosum_M_contig942.26.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 144 bits (362), Expect = 3.570e-37 Identity = 78/163 (47.85%), Postives = 102/163 (62.58%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASDKRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESGPFRIRTPDKQ-QVDPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLF 486
LK A+VEYFR + ++ R+LS REW+VTNEVCS+LD VAEV +K+QGA DT+ISQ F M E+ I ++IR PD+ D V + ++ DL E +V + M KK LG P+E I LLDPRRK S + VNGS D+K AI ++K VA F
Sbjct: 135 LKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF 297
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 144 bits (362), Expect = 2.450e-36 Identity = 78/163 (47.85%), Postives = 102/163 (62.58%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASDKRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESGPFRIRTPDKQ-QVDPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLF 486
LK A+VEYFR + ++ R+LS REW+VTNEVCS+LD VAEV +K+QGA DT+ISQ F M E+ I ++IR PD+ D V + ++ DL E +V + M KK LG P+E I LLDPRRK S + VNGS D+K AI ++K VA F
Sbjct: 463 LKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF 625
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.320e-29 Identity = 62/167 (37.13%), Postives = 102/167 (61.08%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASDKRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESGPFRIRTPDKQQV----DPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLFE 489
LK + EYF+ + ++R+L+ EW++TNEVCS+L V+EV I++QG+ DT++ QA F++ EL+ ++ IR P+ + + +P DD + DL E + ++V E M +K +G VE +S L+DPRRK L + NGS D+++ A ++LK V F+
Sbjct: 473 LKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKFD 639
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 120 bits (301), Expect = 3.320e-28 Identity = 60/167 (35.93%), Postives = 101/167 (60.48%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASDKRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESGPFRIRTPDKQQV----DPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLFE 489
LK + EYF+ + ++R+L+ EW++TNEVCS+L V+EV I++QG+ DT++ QA F++ EL+ ++ IR P+ + + +P DD + DL E + ++V E M +K +G VE +S L+DPR + L + NGS D+++ A ++LK V F+
Sbjct: 278 LKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKFD 444
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE) HSP 1 Score: 115 bits (289), Expect = 4.520e-28 Identity = 62/179 (34.64%), Postives = 104/179 (58.10%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASDKRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESGPFRIRTPDKQQV----DPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLFEGSAP*QTTVPTA 525
LK + EYF+ + ++R+L+ EW++ NEVCS+L V+EV I++QG+ DT+I QA F++ EL+ ++ IR P+ V + +P D + +DL E + ++V ++ M +K +G VE +S L+DP K L + NGS D++ A ++LK V F+ ++TV A
Sbjct: 62 LKKPISEYFKKYLQNERKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDTHIGQAMFIIHELIEMLGEDTHPIRQPNATVVPVPPEGIPTDGTQVTDLTAEAQCVLEVLLDVMREKGVGSAQVAVESLSALMDPSGKLLDSDQLENGSADLRNKAEDDLKAVIAKFDVGPSTESTVAPA 240
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 117 bits (292), Expect = 1.620e-27 Identity = 60/167 (35.93%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASDKRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESGPFRIRTPDKQQV----DPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLFE 489
LK + E+F+ + + R+L+ EW++ NEVCS+L V+E+ I+VQG+ DT+I QA F++ E++ ++ IR P+ V + +P DD +DL E ++V ++ M KK +G E +S L+DPRRK L + NGS D+ + A ++LK V F+
Sbjct: 123 LKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAVIAKFD 289
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 112 bits (279), Expect = 3.500e-25 Identity = 57/163 (34.97%), Postives = 98/163 (60.12%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASDKRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESGPFRIRTPDKQQVDPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLFE 489
LK + EYFR + R+L+ EW++TNEVCS+L V+EV I++QGA+DT+ISQA F++ E++ ++ IR + + + +++ +L + ++V ++ M +K +G+ VE +S L+DPRRK L + NGS +++ A +LK V F+
Sbjct: 471 LKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPE-----EMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFD 628
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 111 bits (277), Expect = 5.810e-25 Identity = 72/196 (36.73%), Postives = 107/196 (54.59%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASD-------KRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESG--PFRIR----TP---------------DKQQVDPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLF-EGSAP 501
LK + EYFR A KR+L+ EW+VTNEVCS+L+ V+EV I++QGA DT++SQATF++ E++ ++ + P R+ TP ++ +D + + + +DL E + V V +E M +K +G+ VE +S LLDPRRK L NGS D+K A +LK F + SAP
Sbjct: 280 LKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIGKFAQESAP 475
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 108 bits (270), Expect = 3.800e-24 Identity = 72/199 (36.18%), Postives = 103/199 (51.76%), Query Frame = 1
Query: 1 LKAAVVEYFR------VHASDKRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIM--ESGPFR----IRTPDKQQVDPVPYD--------------DVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLFEGSAP*QTTVP 519
LK + EYFR + KR+LS EW VTNEVCS+L V+E+ I++QGA+DT+ISQA FL+ E++ ++ E+ P R I TP +D +P + D+ DL E + V +E M +K +G+ VE +S LLDPRRK L + NG D++ A +LK F + T P
Sbjct: 135 LKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATFTAESVPPTPAP 333
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.770e-23 Identity = 68/175 (38.86%), Postives = 96/175 (54.86%), Query Frame = 1
Query: 1 LKAAVVEYFRVHASD-------KRRLSVREWSVTNEVCSVLDPVAEVNIKVQGAEDTYISQATFLMTELLAIMESGPFRIRTPDKQQVDPVPYDDVETSDLCGEVRTAVDVCVEYMGKKNLGEVGNPVELISTLLDPRRKPLSKQECVNGSPDVKQHAINELKDVADLF-EGSAP 501
LK + EYFR A KR+L+ EW+VTNEVCS+L+ V+EV I++QGA +T++SQATF++ E ES +D + ++ + + L E + V V E M +K +G+ VE +S LLDPRRK L NGS D+K A +LK F + SAP
Sbjct: 280 LKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEGEGQNESS-----------LDGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKFAQESAP 443 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig942.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig942.26.1 >prot_A-nodosum_M_contig942.26.1 ID=prot_A-nodosum_M_contig942.26.1|Name=mRNA_A-nodosum_M_contig942.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=110bp MTELLAIMESGPFRIRTPDKQQVDPVPYDDVETSDLCGEVRTAVDVCVEYback to top mRNA from alignment at A-nodosum_M_contig942:129401..129978- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig942.26.1 ID=mRNA_A-nodosum_M_contig942.26.1|Name=mRNA_A-nodosum_M_contig942.26.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=578bp|location=Sequence derived from alignment at A-nodosum_M_contig942:129401..129978- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig942:129401..129978- >mRNA_A-nodosum_M_contig942.26.1 ID=mRNA_A-nodosum_M_contig942.26.1|Name=mRNA_A-nodosum_M_contig942.26.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=330bp|location=Sequence derived from alignment at A-nodosum_M_contig942:129401..129978- (Ascophyllum nodosum dioecious)back to top |