mRNA_A-nodosum_M_contig941.12.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig941.12.1
Unique NamemRNA_A-nodosum_M_contig941.12.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: D7G098_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G098_ECTSI)

HSP 1 Score: 1067 bits (2759), Expect = 0.000e+0
Identity = 523/625 (83.68%), Postives = 564/625 (90.24%), Query Frame = 2
Query:  116 MNLLAGYGSGDE-NSSDESGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGSQIMIHNPKADHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRR-KRKKSGGDGANEGGDVGDGNEDDDR--DLGETDTDSVWAPEAPREKTDFEAGTMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGAR-LEEEGED-HQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSG-DVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            MNL+AGYGS D+ NSSD  G    A    +   +FRAPRVNAAP+V+ S AM QA+ SLM+ P G LGLK S+ K G QIMIHNPKA+HF APVQGPAHPH+R+LPVPAGGRATGTGGVIEQ SLE+WSFHEQYHTFHQFGYAVD RGDTVGNL+EH KRQGDTVL+A+ GG+RR KRKK  G G           + ++R  DLG++D D VWAPE PREKTDFEAGTMT EQ+KFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESK ARSTFHGKAQHDYQGRSWMAPPAGAR +E+EGED H+CFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDG+VKIWDVNGGRGQRRTY GH+AAVRD+ FSNDGKQF+SAGYDRF+RQWDTETGQC+ TFTNRKMPYCAK+YPVDNN+FLCGCSDNRVVQYDAR+G ++VQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYI+EPDMHSMPATTLHP+GGFFVGQSLDNKIVTWTARDKFRQM+KKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRK QCHDDGPCID+AWHPLEPSWVATAGWDGVIKLWD
Sbjct:    1 MNLVAGYGSSDDANSSDGGGGSGPASKAARPKATFRAPRVNAAPNVLVSGAMAQATDSLMSSPLGRLGLKPSS-KTGGQIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDSRGDTVGNLSEHSKRQGDTVLSAEVGGLRRNKRKKQAGAGXXXXXXXXGEGKGEERGGDLGDSDNDGVWAPEVPREKTDFEAGTMTAEQTKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKTARSTFHGKAQHDYQGRSWMAPPAGARSVEDEGEDVHKCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDIQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARNGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLEPSWVATAGWDGVIKLWD 624          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: A0A7S2Y0E0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E0_9STRA)

HSP 1 Score: 619 bits (1595), Expect = 2.070e-209
Identity = 318/582 (54.64%), Postives = 392/582 (67.35%), Query Frame = 2
Query:  344 SQIMIHNPKADHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLA-----------------EHGKRQG-------DTVLTADAGG---------VRRKR-------KKSGGDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREKTDFEAGTMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            SQ ++ NPKA    AP  GPAHP+K+E+ +PA GR   TG V+E   +EDW+F +QYHTF  FGYA D +G  VGN +                 E  K+QG       D  ++A  G           RRKR       KK   + A    D GDG E       + +  ++        +TDFE GT+TEEQ KFR+ WEA Q  KH+EY+M+EDHDRRDERKISHL+PPRH+R T +  + + FHG+ + DYQGRSW+ PP G +  +    H+ F PK+CIHR+TGHTKGV  I FFPG+GHLLLS SMD  +KIWDV   R  +RTY GH+  VRDV F+ DG QF             TETGQ LGTFTNRK+PYC ++YPVD NIFL G S N+VVQ+DAR+ ++VQEYNHHLGPVNTVLF +DN+RFVSTSDDKK+LIWEYNIPVPIKYISEP MHSMP TTLHPSG FF GQS++N+I  + ARD+F+ MRKK FKGHVNAGYA R++FSPNGK++  GD +GK ++WDWGS ++Y+K   H++ P     WHP+E SWVAT GWDGVIKLWD
Sbjct:   73 SQKLVINPKAAAITAPTYGPAHPYKQEMALPAHGREMPTG-VLEPAGVEDWAFQQQYHTFANFGYAHDDQGKVVGNESGPWRVHSALQAAVKGKKEDTKKQGGGEEVLPDAQMSAFTGSDKQLRRQLKKRRKRERALQEIKKRAREAAE---DHGDGEEGGGASEAKGEGKTIEEELYGGPQTDFEKGTITEEQLKFRQEWEAAQKLKHKEYDMDEDHDRRDERKISHLMPPRHDRHTTAPDSSTKFHGRQEVDYQGRSWVKPPRGHKAGDG--THKAFPPKRCIHRWTGHTKGVNHIEFFPGHGHLLLSCSMDAKIKIWDVLEDRQVKRTYQGHSMGVRDVRFNADGSQFXXXXXXXXXXXXXTETGQVLGTFTNRKVPYCVRYYPVDENIFLVGSSCNKVVQWDARANEIVQEYNHHLGPVNTVLFAEDNRRFVSTSDDKKILIWEYNIPVPIKYISEPSMHSMPTTTLHPSGNFFAGQSMNNEIHVYAARDRFKFMRKKLFKGHVNAGYANRISFSPNGKYICCGDAEGKFFVWDWGSRRIYKKFLAHENNPVTSCDWHPVESSWVATCGWDGVIKLWD 648          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: A0A836CBI0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI0_9STRA)

HSP 1 Score: 600 bits (1548), Expect = 6.060e-203
Identity = 332/632 (52.53%), Postives = 397/632 (62.82%), Query Frame = 2
Query:  116 MNLLAGYGSGDENSSDESGARSAAPARKQTITS------FRAPRVNAAPHVVASRAMDQASS-----SLMAPPTGMLGLKNSTPKVGSQIMIHNPKADHFRAPVQGPAHPHKR-ELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREKT--DFEAGTMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            M+LL GY SG    +DESG+ +     +Q + S       +   V AAP V+  RA + A S     S  A P G L     T +   Q+M++NPKAD   APV GPAHP +  ++ VP GG  TG G V+E+ S+EDWSF EQYHTF Q  Y +   GD VG++A+        +    AG  +R+                 G      D+G+  T  +WAP+    +   D EAGTMTE Q+ FREA+ AE+AKK REYNMEEDHDRRDERK+ HLLPPRH+RDT + +A++TFHGK + DY+G+SW+ PP G R      DHQ F PKKCIHR+TGHTKGVQAI FFPG+GHL+LS SMDG  K+WDV G R  RRTY GH+AAVRDV FSNDG++F+SAGYDRFVR WDTETGQC+ TFTNRKMPY   FYP                                                            EY IPVPIKYISEP MHSMPA  LHPSG ++VGQSLDN+I+ W ARDKFRQ RKK FKGH NAGYACRM FSPNGK+LASGDG+G++++WDWGSTKVYRK   H DGPCID+ WHP E SWVATAGWDG+IKLWD
Sbjct:    1 MDLLQGYASGS--GADESGSEAQ---EEQPMVSVNLKPQLQTRAVVAAPTVI--RAPEHAKSVVNPLSAAAGPVGQL----QTARAPGQMMMYNPKADLLLAPVLGPAHPFRASKMEVPVGGSHTGAG-VVERASIEDWSFQEQYHTFQQHKYTIGVSGDMVGDVAKG-------LAVEQAGPPQREXXXXXXXXXXXXXXXXTGI----TDVGDEVTTGIWAPQEDETRVVPDAEAGTMTEAQAAFREAYLAEKAKKQREYNMEEDHDRRDERKMGHLLPPRHDRDTTAAEAKTTFHGKKEADYKGKSWVEPPGGHRAGVG--DHQAFPPKKCIHRWTGHTKGVQAIEFFPGFGHLILSGSMDGKCKVWDVLGDRQARRTYSGHSAAVRDVKFSNDGRRFLSAGYDRFVRLWDTETGQCVRTFTNRKMPYTVTFYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYGIPVPIKYISEPHMHSMPAVALHPSGNYWVGQSLDNQILAWGARDKFRQNRKKIFKGHTNAGYACRMDFSPNGKYLASGDGEGRLFVWDWGSTKVYRKLAAHTDGPCIDVKWHPTEASWVATAGWDGIIKLWD 607          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: W7TQP6_9STRA (Pre-mrna-processing factor 17 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP6_9STRA)

HSP 1 Score: 580 bits (1496), Expect = 4.750e-195
Identity = 299/562 (53.20%), Postives = 378/562 (67.26%), Query Frame = 2
Query:  344 SQIMIHNPKADHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVD-CRGDTVGNLAEHGKRQG------DTVLTAD-----AGGV------RRKRKKSGGDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREK--TDFEAGTMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            S+ +  N KA    AP+QGP HP +RE+    GG    TGG  E   +E W+FHEQ+HTFH  GYA D   G  +GN+  + +++G       T + A      +G        RRKRK     G  E           D DLGE + D  WAP A  E   T  EAGT+TEEQ + R      +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT + +  + FHGK + DYQGRSW+ PP G R  E   DH C+ PK+C+HRYTGH KGVQAI FFPG GHLLLSAS+DGT K+W V   R  RRTY GH AAVR ++FS DG +F+S G+DRF+R WDTETGQC+ T TNRK+PY AKFYP ++N+F+   SDNR+  YD  SG++VQEYNHHL  VNTV F D+N RF STSDDKK+L+WE++I VPIKYI+EP MHSMPA T  P+G F   QSLDN I  +  RD+F+ + KK FKGH  AG+AC+ AFSPN ++LASGDG+GK++ WD+ +T+   K++ HD+GPCI + WHP+E S VA+ GWDG+IKLW+
Sbjct:   72 SRELTTNVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRK-----GVEE-----------DEDLGEEE-DGPWAP-AKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVET--DHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: K8Z4U6_NANGC (Pre-mRNA-processing factor 17 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4U6_NANGC)

HSP 1 Score: 574 bits (1480), Expect = 3.980e-190
Identity = 297/560 (53.04%), Postives = 375/560 (66.96%), Query Frame = 2
Query:  344 SQIMIHNPKADHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVD-CRGDTVGNLAEHGKRQ------GDTVLTAD-----AGGV------RRKRKKSGGDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREK--TDFEAGTMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKL 1963
            S+ +  N KA    AP+QGP HP +RE+    GG    TGG  E   +E W+FHEQ+HTFH  GYA D   G  +GN+  + +++      G T + A      +G        RRKRK     G  E           D DLGE + D  WAP A  E   T  EAGT+TEEQ + R      +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT + +  + FHGK + DYQGRSW+ PP G R  E   DH C+ PK+C+HRYTGH KGVQAI FFPG GHLLLSAS+DGT K+W V   R  RRTY GH AAVR ++FS DG +F+S G+DRF+R WDTETGQC+ T TNRK+PY AKFYP ++N+F+   SDNR+  YD  SG++VQEYNHHL  VNTV F D+N RF STSDDKK+L+WE++I VPIKYI+EP MHSMPA T  P+G F   QSLDN I  +  RD+F+ + KK FKGH  AG+AC+ AFSPN ++LASGDG+GK++ WD+ +T+   K++ HD+GPCI + WHP+E S VA+ GWDG+IK 
Sbjct:   72 SRELTTNVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKECLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRK-----GVEE-----------DEDLGEEE-DGPWAP-AKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVET--DHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKF 610          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: F0Y5V9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5V9_AURAN)

HSP 1 Score: 555 bits (1431), Expect = 3.780e-187
Identity = 279/505 (55.25%), Postives = 340/505 (67.33%), Query Frame = 2
Query:  461 GGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREKTDFEAGTMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFT-NRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGD-VVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            GG +E+ ++E+WSF EQYHTF  FGYA D  G          K  GD    ADA   R KRK+ G                 D  LG  D   VWAPE P    +     +   +++  EA  A+     R Y+  ED DRRDERKISHLLP RH+RDT + +A+  FHG A  DYQGRSW  P  G    +  +DH CF PK+C+H++TGH KGVQ I   P YGHL+LSASMDG+ KIWDV   R    TY GHA AVRD  FS+DG  F + G+DRF R WDTETG  L T T NRKM YC  FYP D+ I L G SDNR+ Q+D R+ + +VQEYNHHL PVN++ F+DD++RFVST+DDKK+ IWE+NIPVP+KYISEP M+++P   LHPS  F+ GQSLDN IVT+ ARDK +QMRKK FKGH+N+GY+C + FSPNGKF+ASGDG+GK++ WD+ +T+VYRK Q HD GPCI  AWHPLEPSWV T GWDG+IKLWD
Sbjct:   11 GGSVERAAIEEWSFDEQYHTFQSFGYAQDAAGGQ--------KLVGDGAA-ADAPRPRAKRKRGG-----------------DAPLGTEDEHGVWAPE-PEHIDEDAPEDLAARKAEIAEAV-AKPKSATRAYDQNEDFDRRDERKISHLLPARHDRDTTAIEAKHAFHGDAMRDYQGRSWTRPNLGELRPKVDDDHDCFIPKRCVHKFTGHGKGVQCIKLHPTYGHLMLSASMDGSAKIWDVYNDRRCLMTYAGHAEAVRDATFSHDGSTFATCGFDRFTRVWDTETGAALHTLTPNRKMCYCVDFYPRDDKILLAGASDNRIYQWDLRANEEIVQEYNHHLQPVNSITFIDDDRRFVSTADDKKIFIWEHNIPVPMKYISEPHMNAVPVVELHPSTNFWCGQSLDNTIVTYGARDKLKQMRKKTFKGHLNSGYSCGITFSPNGKFIASGDGEGKLFFWDFKTTRVYRKLQAHDSGPCIGCAWHPLEPSWVFTCGWDGLIKLWD 487          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: A0A7S2WI16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI16_9STRA)

HSP 1 Score: 552 bits (1423), Expect = 4.520e-184
Identity = 281/574 (48.95%), Postives = 371/574 (64.63%), Query Frame = 2
Query:  332 PKVGSQIMIHNPKADHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSG---------------------GDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREKTDFEAGTMTEEQSKFREAWEAEQAKKHR---EYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGK--AQHDYQGRSWMAPPAGAR-LEEEGED-HQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            PK  ++ + +N K +   AP  GP HP + +  +P  G A    G I  T+++ W+F EQ+HT++ +GYA+D RG  VG+   +  +QGD+V T        KRK+SG                     G G   GG +G G                WA     E  D +A  + E ++K     E    KK +   E+++  D DRRDERK SHLLP RH+++T++ + +S FHGK   + DYQGRSW+ PP G R L  EG++ H  F PKKCIHR+TGH KGVQAI +FP  GHLLLSAS DGTVKIWDV+  R  RRTY GH+  VRDV+F+NDG+ FI+A +DR++R WDTETGQC+ TF NRK+PY  KF+P++ + FL                  VQEYNHH+  VN+VL  DD +RFVST+DDKK+L+WE+ IPVP+KYI++P MH++P T LHP G  F  QS++N+I  + ARD+FR+MRKK F+GHVNAGYAC++ +SPNGK++ASGDG+G++++WDW STK  R+ + HDDGPCID  WHPLEPSWVAT GWDG IKLWD
Sbjct:   65 PKKAAKGLRYNAKKEVLMAPSAGPKHPFRTQAFMPHLGAAAHANGYIAPTNVDQWAFEEQFHTYNSYGYAMDTRGQVVGDSGAYRDQQGDSVSTMKP----AKRKRSGKKAEDPILKAARAEAAREFDLGSGGGSGG-LGGG---------------PWA-----EHRDEDAELLEEIEAKNHARMEEAAEKKKKAEDEFDVNADLDRRDERKFSHLLPARHDKNTKAMEPKSVFHGKKGTEVDYQGRSWVEPPLGVRPLSSEGDEIHDSFVPKKCIHRFTGHKKGVQAIRWFPDTGHLLLSASYDGTVKIWDVHNSRSVRRTYTGHSEGVRDVNFTNDGRHFITASFDRYMRYWDTETGQCVSTFCNRKVPYQVKFHPIEQDQFLXXXXXXXXXXXXXXXXXXVQEYNHHIQSVNSVLICDDGKRFVSTADDKKILVWEWGIPVPMKYITDPTMHAVPTTALHPWGQHFTAQSMENEIHVYGARDRFRRMRKKVFRGHVNAGYACQITYSPNGKYMASGDGEGRLFVWDWKSTKQIRRFRAHDDGPCIDAQWHPLEPSWVATCGWDGTIKLWD 613          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: K3WD12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD12_GLOUD)

HSP 1 Score: 550 bits (1417), Expect = 2.410e-183
Identity = 301/634 (47.48%), Postives = 407/634 (64.20%), Query Frame = 2
Query:  116 MNLLAGYGSGDENSSDESGARSAAPARKQTI--TSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGSQIMIHNPKADHFRAPVQGPAHPHKREL---PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQF--GYAVDCRG-----DTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREK-TDFEAGTMTEEQSKFREAWEA---EQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            M  L  Y S D    DE+   +A+P+++Q    ++   P +N+AP VV +      S+S          L  ++ K   Q+ ++ P  +   AP  GPA+ + R     P   G       G++E+T++ED++F  QYHT++Q   G  ++ R       T   +  H +   + V T      R  +K+     A E             + G+   D +WAP   +   TD EAGTMT EQ   R+A  A   ++A++  +++ E D DR  E+K++HLLP R     E+  A++ F    ++DYQGRSW+ PP G R  +EG DHQ F PK+C+H++TGHTKGVQAI  FP YGHLLLS SMD TV+IWDV   +  +R Y GH+ AVR ++FSNDGKQF+S G+DRF++ WDTETGQ + +FTNR++PYC KFYP DNN F+ G S+N +VQ+DARSG++VQEYNHHL  VN+V FVDDN+RFVSTSDDKK+LIWE+ IPVP+KYISEP MHSMPA TLHPSG FF GQSL+N+I  +TARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGD +G++  WDW STK+Y+K + HD GPC+   WHP+EPS V + GWDG+IK WD
Sbjct:    1 MEHLVQYTSSD----DEADVVTASPSKQQQPQGSTVSLPVINSAPLVVVANPEIARSTSQF--------LAAASQK---QLSVNLP-VESTLAPYVGPANAYARNAQLDPAYVGSGKEIVTGIVEKTNMEDFNFDAQYHTYNQSHTGMYLNKRSAPETSQTSDAIVSHNE---ENVFT-----TRNVKKRKNHTVAKEKAAA--------EEFGDDSVDGIWAPYMEKSVVTDAEAGTMTAEQEAIRDAHIAAKKQKAERSTQFDEEMDFDRMIEKKMAHLLPARLKAGQEAMVAKTQFLDTQEYDYQGRSWIEPPRGLR-PDEGGDHQVFLPKRCVHKWTGHTKGVQAIELFPSYGHLLLSGSMDHTVRIWDVYNEKKCKRVYEGHSGAVRGINFSNDGKQFLSCGFDRFIQLWDTETGQSIKSFTNRRVPYCVKFYPGDNNNFVIGDSNNMIVQFDARSGEIVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPVKYISEPSMHSMPAVTLHPSGAFFAGQSLNNQIDVYTARDKFKLQRKKVFKGHSNAGYACQIGFSPNGQYIMSGDAEGRLCFWDWKSTKMYKKLRAHDRGPCMGALWHPIEPSKVVSCGWDGLIKYWD 601          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: G4Z505_PHYSP (Putative pre-mRNA splicing factor n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z505_PHYSP)

HSP 1 Score: 543 bits (1400), Expect = 1.040e-180
Identity = 303/638 (47.49%), Postives = 393/638 (61.60%), Query Frame = 2
Query:  116 MNLLAGYGSGDENSSDESGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGSQIMIHNPKADHFRAPVQGPAHPHKREL----PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNL----AEHGKRQGDTVLTADAGGV-----RRKRKKSGGDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREKT--DFEAGTMTEEQSKFREAWEAEQAKKHREYNMEE-----DHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            M  L  Y S DE    E  +RS +P R     S   P VN+AP V  +   ++A+ +              T    +Q+ ++ P  +   AP  GP      +L    P+ AG       GV+EQ  +ED+SF  QYHT++Q       R    G      A  G++  DT++      V      +KRK            V         D G+  TD +WAP   + KT  D E GTMTE+Q   RE  E ++AK+ +    EE     D DR  E+K  HLLP R      + + +STF G  ++DYQGR+W+ PP    L+ +  DHQ F PK+C+H++TGHTKGVQAI  FP YGHLLLS SMD TV+IWDV   R  +R Y GH+ AVR ++FSNDG+QF+S  +DRF++ WDTETGQ + +FT R++PYC KFYP+DN  F+ G S+N VVQ+D RSG++VQEYNHHL  VN+V FVDDN+RFVSTSDDKK+L+WE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQSL+N+I  +TARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGDG+GK+  WDW +TK+ +K + HD GP +   WHPLEPS V + GWDG+IK WD
Sbjct:    1 MEALGAYASSDE----EEASRSTSP-RSTDSPSLALPVVNSAPFVALTDRQEEANKAAFL-----------TAGTQTQLAVNLP-VESTLAPYVGPQSSGTMDLALVDPLRAGSGKQVVTGVVEQADMEDFSFEAQYHTYNQTLSRNPARNRAKGAPPSAPALPGEKLADTIVAPGEENVFTSCNAKKRKNQ----------VVSKERAAAEDFGDEATDGIWAPYKEKGKTLTDAEKGTMTEQQKALRE--EHQEAKRRKAEAKEEADDEMDFDRMVEKKTGHLLPARLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPR--TLKPDNGDHQVFLPKRCVHKWTGHTKGVQAIELFPQYGHLLLSGSMDNTVRIWDVYNERKCQRVYEGHSGAVRGINFSNDGRQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTNFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFKGHQNAGYACQIGFSPNGQYIMSGDGEGKLVFWDWKTTKMIKKLRAHDRGPTMGALWHPLEPSKVISCGWDGLIKYWD 607          
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Match: A0A5D6XJI7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI7_9STRA)

HSP 1 Score: 542 bits (1397), Expect = 1.970e-180
Identity = 319/632 (50.47%), Postives = 397/632 (62.82%), Query Frame = 2
Query:  116 MNLLAGYGSGDENSSDESGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGSQIMIHNPKADHFRAPVQGPAHPHKRELPVPAGGRATGTG-----GVIEQTSLEDWSFHEQYHTFHQ-FGYAVDCRGDTVGNLAEHGK---RQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGNEDDDRDLGETDTDSVWAPEAPREK-TDFEAGTMTEEQSKFREAW-EAEQAKKHREYNMEE--DHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQ-HDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGVIKLWD 1969
            M LLA Y S  ++ SD     SAA A   TI     P VN+AP V  +      +SSL +  +  L L  +    G Q+ ++ P A    APV GP     R           GTG     GV+E  SL+D SF  QYHT++Q  G A   R    G  A        + D+V TA     RR    +    A E              LG+   D VWAP A +   T  EAGTMT EQ+  REA  EA++ K  R   ++E  D DR  E+K +HLLP R     E+  A S F    Q +DYQGR+W+ PP G + + +GE HQ F PK+C+H++ GHTKGVQAI  FP +GHLLLS S+D TV+IWDV   R  +R Y GH+ AVR +HFSNDG+QF+SAG+DRF++ WDTETGQ +  FTNR++PYC KF P DN+ F+ G S+N VVQ+DARSG+VVQEYNHHL  VN+V FVDDN+RFVSTSDDKK+LIWE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQSL+N+I  + ARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGD  G++  WDW STK+Y+K + HD GPC+   WHPLEPS V + GWDG+IK WD
Sbjct:    1 MELLAHYASSSDDESD-----SAALAH-DTIAPL--PSVNSAPSVSFT------ASSLSSTSSAALALVAA----GKQLSVNLPVAATL-APVLGPHAGTGRSSDA----LTRGTGREIVTGVVENASLDDLSFDAQYHTYNQRHGGARLNRRAVSGAEAPTDAIVALEADSVFTARNAKKRRNAALAREKAAAE-------------QLGDESVDGVWAPFADKSVLTAAEAGTMTAEQAALREAHLEAKRQKAERASQVDEEMDFDRMIEKKTAHLLPARLKAGQEAMAATSAFLDAGQEYDYQGRAWVEPPRGLKPDPDGE-HQVFLPKRCVHKWAGHTKGVQAIELFPTFGHLLLSGSLDHTVRIWDVYNERKCKRVYEGHSGAVRAIHFSNDGRQFLSAGFDRFIQLWDTETGQSIKAFTNRRVPYCVKFSPADNSQFVIGDSNNMVVQFDARSGEVVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYAARDKFKLQRKKVFKGHSNAGYACQIGFSPNGQYVMSGDADGRLVFWDWKSTKLYKKLRAHDRGPCMGAVWHPLEPSKVVSCGWDGLIKYWD 595          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig941.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G098_ECTSI0.000e+083.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2Y0E0_9STRA2.070e-20954.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CBI0_9STRA6.060e-20352.53WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
W7TQP6_9STRA4.750e-19553.20Pre-mrna-processing factor 17 n=2 Tax=Monodopsidac... [more]
K8Z4U6_NANGC3.980e-19053.04Pre-mRNA-processing factor 17 n=1 Tax=Nannochlorop... [more]
F0Y5V9_AURAN3.780e-18755.25Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2WI16_9STRA4.520e-18448.95Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K3WD12_GLOUD2.410e-18347.48Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
G4Z505_PHYSP1.040e-18047.49Putative pre-mRNA splicing factor n=4 Tax=Phytopht... [more]
A0A5D6XJI7_9STRA1.970e-18050.47Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig941contigA-nodosum_M_contig941:175800..180037 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G098
Preferred nameCDC40
PFAMsWD40
Model size2682
Max annot lvl2759|Eukaryota
KEGG koko:K12816
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000348,GO:0000350,GO:0000375,GO:0000377,GO:0000389,GO:0000393,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031123,GO:0031124,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034399,GO:0034613,GO:0034622,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0045292,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071007,GO:0071013,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Exons3
Evalue0.0
EggNOG OGsKOG0282@1|root,KOG0282@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-14_005040.1
DescriptionmRNA splicing, via spliceosome
Cds size1857
COG categoryS
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870436.5803137-UTR-A-nodosum_M_contig941:175799..1765091680870436.5803137-UTR-A-nodosum_M_contig941:175799..176509Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig941 175800..176509 -
1680870436.6809926-UTR-A-nodosum_M_contig941:179922..1800371680870436.6809926-UTR-A-nodosum_M_contig941:179922..180037Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig941 179923..180037 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870436.6347935-CDS-A-nodosum_M_contig941:176509..1766111680870436.6347935-CDS-A-nodosum_M_contig941:176509..176611Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig941 176510..176611 -
1680870436.650816-CDS-A-nodosum_M_contig941:176975..1772931680870436.650816-CDS-A-nodosum_M_contig941:176975..177293Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig941 176976..177293 -
1680870436.6681728-CDS-A-nodosum_M_contig941:178485..1799221680870436.6681728-CDS-A-nodosum_M_contig941:178485..179922Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig941 178486..179922 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig941.12.1prot_A-nodosum_M_contig941.12.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig941 176510..179922 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig941.12.1

>prot_A-nodosum_M_contig941.12.1 ID=prot_A-nodosum_M_contig941.12.1|Name=mRNA_A-nodosum_M_contig941.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=619bp
MNLLAGYGSGDENSSDESGARSAAPARKQTITSFRAPRVNAAPHVVASRA
MDQASSSLMAPPTGMLGLKNSTPKVGSQIMIHNPKADHFRAPVQGPAHPH
KRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTV
GNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGNEDDDRD
LGETDTDSVWAPEAPREKTDFEAGTMTEEQSKFREAWEAEQAKKHREYNM
EEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPP
AGARLEEEGEDHQCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMD
GTVKIWDVNGGRGQRRTYIGHAAAVRDVHFSNDGKQFISAGYDRFVRQWD
TETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGDVVQ
EYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMH
SMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYAC
RMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPL
EPSWVATAGWDGVIKLWD*
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mRNA from alignment at A-nodosum_M_contig941:175800..180037-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig941.12.1 ID=mRNA_A-nodosum_M_contig941.12.1|Name=mRNA_A-nodosum_M_contig941.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4238bp|location=Sequence derived from alignment at A-nodosum_M_contig941:175800..180037- (Ascophyllum nodosum dioecious)
AGGTGGTCGAAGGATCCCTGCAACCGCTGGGGTACGTTCTCTCGCTGTCC CGACCTCAGTGTTGTAGTTTGACATTGTATCGTGATTATAAATCCAGGAG TCTAGTGAAGTCACAATGAACCTTTTGGCAGGATACGGCAGTGGCGACGA GAACTCATCCGATGAGAGCGGTGCAAGATCGGCAGCGCCTGCTCGGAAAC AGACCATTACATCTTTCCGGGCGCCGCGTGTGAACGCAGCTCCTCACGTT GTCGCATCTAGAGCGATGGACCAGGCTTCCTCTTCTCTTATGGCCCCACC TACGGGGATGCTGGGCCTTAAAAATAGTACTCCGAAGGTGGGAAGTCAAA TTATGATCCACAACCCCAAGGCTGACCACTTCCGCGCACCTGTGCAAGGA CCAGCACACCCGCACAAGCGAGAGTTGCCCGTCCCGGCCGGTGGGCGCGC CACGGGCACCGGCGGCGTAATCGAGCAGACCTCTCTGGAAGATTGGTCCT TCCATGAGCAGTACCACACCTTCCACCAGTTCGGCTACGCGGTGGACTGT CGGGGCGACACCGTCGGCAACCTTGCCGAGCACGGGAAGCGTCAGGGGGA CACGGTTCTCACAGCGGACGCCGGAGGCGTGCGACGCAAGCGGAAGAAGA GCGGCGGGGACGGGGCAAATGAGGGTGGCGATGTCGGCGACGGAAACGAG GATGACGATCGAGATCTTGGTGAAACAGACACGGACAGCGTGTGGGCTCC GGAGGCACCGAGGGAAAAAACGGACTTCGAGGCAGGCACGATGACCGAAG AGCAATCAAAATTCCGAGAGGCTTGGGAGGCGGAGCAGGCAAAGAAACAC CGCGAGTACAACATGGAGGAGGACCACGACAGACGAGACGAACGCAAAAT CTCGCACCTTCTTCCGCCGAGGCACAACCGGGACACGGAGTCCAAGAAGG CGCGGTCTACATTCCACGGGAAGGCGCAGCACGACTACCAGGGGAGGTCG TGGATGGCGCCGCCTGCCGGAGCAAGGCTCGAGGAGGAAGGGGAAGACCA CCAGTGCTTCACGCCCAAAAAGTGCATCCATCGGTACACAGGCCACACGA AAGGAGTGCAGGCGATCTCTTTCTTCCCGGGGTATGGGCACTTGCTTCTT TCGGCGAGCATGGATGGCACGGTGAAAATCTGGGACGTGAACGGGGGTAG AGGGCAGCGGCGGACGTACATAGGGCACGCCGCGGCCGTGCGCGACGTGC ACTTTAGCAACGACGGAAAGCAGTTCATCAGCGCCGGATACGACCGCTTT GTGCGGCAGTGGGACACGGAGACGGGGCAGTGCCTGGGGACGTTCACCAA CCGCAAGATGCCTTACTGCGCCAAGTTCTACCCGGTCGACAACAACATAT TCTTGTGCGGCTGCTCGGACAACCGCGTCGTACAATACGACGCCCGTTCG GGGGACGTTGTACAAGAATACAATCACCACCTGGGGCCCGTCAACACGGT GCTCTTTGTGGATGACAACCAGCGCTTTGTCAGCACTTCCGACGACAAAA AGGTGCGCACGAGGCGTGGAGGCCGTTACTGTTGTGCCGCTTGTTAGTCT ATGACGCGCGTTCTGGGCTGAATACGCTCGGGGGGACGGCACGCTGTAGT CGCTGCCCGACCCCGACAGACACACGGACATCCATACCGGTATTCGTTCT GTACAATTGTTTTTGCTGTTCTACCATGAGATGGACGTAATCTTGGTCGC TTAGAGAGTGACAAGGGTTGTTGGCGGCGTCTTCCTTTTGCATGAGATTG TCATACGCTTCCAATGACGGGTGGCCCGGCACCGGAGAAACGAACGTTTG GCGTCGTATTGAGGCAATCGTCGAGAGATATCTGTATTTGCGTATTTTGT ATCTCGTACATTTTCATTACGTTTTTCGACCGCAGCGAAACCCCAACACG CCCTCTCCTCTCCTCTCCTTTGCTTCCCCCGTTCGAGTTCGTGCGGGAGA ACCACCGCATTTCACTCGTTACTTAGCCTTTTTTAAAGAAAAATCAGAAC GCACCTAGACCTTCTCAGCATCCCCCAGTCAGGGGGAAAAAATGTCAAAA CGTTTAGGTGGTATCATAGGTTGCAAATACAAAACCTCTTCATGGCATTT AAACGGGTTCCCCTCTGGTAGTAACATTGGGTCAACAGTATAATATCGGG GAGAAGCCCACCGTTTTACTGTACACTTACATTAATCGCCATGCAGGGAC ACCCAAAAAAACAGCGAAACAAAATAGTACATGATCAAACATGGTAGTAA TATACTGTTACATAGGCTGTGAAGCCGAAGTCACTACATTGAAACGAGAA CAGAGAGGACCATGATGCAGATATCTTCAACATAATCCAGAAAGTACAAG ACACCGTTATTCACCTGGAAGTAGACGAAGAGCAGTGGGAGATCACACAA GGAAGTAAGAGGCAAGCGGAAAGAACTGGGTTCTTCGCTCAATACTTGTC AGGGCTACGACACACAGATGCTCCTCATACATAGACTTAGCTATGGTCCC GCGTTGACCAGAAACACAGAGGAAAGAGCATCTGTCTGTCAAAGTGACTA AATAGGCCTCACAACCTCCGCGTTATTCCCTCGCTCTCGCCTCCCCTTCC CCGCCGCTCTCCATGTGTGGGACTCCCTTTCCCCCTCTTTCCCCCTCTGC TGTCGGACCCCGATGACCCGAACCCACGCCGTCCACCGACGCAGGTGTTG ATATGGGAGTACAACATCCCCGTGCCCATCAAGTACATCTCGGAGCCGGA TATGCACTCCATGCCGGCGACGACTCTCCATCCTTCGGGAGGTTTCTTCG TGGGACAGTCCCTTGACAACAAGATCGTCACGTGGACGGCCCGGGACAAA TTCAGGCAGATGCGGAAGAAGGAGTTCAAGGGCCACGTGAACGCGGGCTA CGCCTGCCGCATGGCCTTCAGCCCGAACGGAAAGTTCTTGGCGTCCGGGG ACGGGCAGGGGAAGATGTACATTTGGGACTGGGGGAGCACCAAGGTCTAC CGTAAGCATCAGGTGAGAGCTCGTTGAGCGACGCGACCTCCTCACCCAAG CGGATTGGAACATTTTTTTTTGTGGTTTGTTCTTCTACGAAGGAGGCATG TGCTGTTAAAAGGGTAAAGAGCGCACCCTAACTCATGTTACAGCAACAAA ACTTGCCTGGACTGCTGCCCAAGTGACATAAGTGCCCTGGCGCGCGCGCG AAGTTGTGGGCGCTCTCTCTCCATCTTCAGGTGCCTGCTCTACGTGCACC GATCACCGGTTCAGCGCTTTGTGAAATGATGGATTCGCCTGCTCTCGGCT AGTTCCGTGTTTCATTTTTCGCCCCTTCCGCTCTCCTCCCCCCTTTCCCT CACACTCTTGGCCTACCGTACACCAGTGCCACGACGACGGCCCCTGTATC GACATTGCGTGGCATCCCCTGGAGCCGAGCTGGGTTGCAACCGCGGGCTG GGACGGAGTTATAAAGCTTTGGGACTAGCGAGGATGGACGCGTGAGACCC TAGTTGCTTTCTAGAGTCCGCCGGACTCTGCATTTGTAAGAAGAGGGCGA CTGACTTTGTGTATCCCGCTATATATAGGTTGGCTGAATGACCACCGAGG CGTGTACCCTAGGCGGTCGAATTCCCTGTAGTCATGTCAGTGGTTGCTCT GAGCGAAAGTGTCCCGAAGAAAATGCGGCATATGATAGGGGAGTTTACCT CCAACACCAAGACGTTGGGCATAGCGTTCCCTGTCGAGTTTTTCCGTAGC AGCGGGGGCACGGACGTTTCAGGGCGTATTTCTAGAGGGATTTCAAAGGA CCTTCGCCCAAACGGCAACGTTTATGGTCTATTAATATTAATAGTTGTCG ACAATGCGGGACGGGTGGTTATTTTTCGTCCGAGTATGTCTTTTTTTATC TTTTAATTATAACCTGTCAGGTACCGTACACAGAAAACAACCCGTGCGCG AAATGCTTTTTTTAATCTTTCAAATGAATAACCTGTCCGGTACCATACGA ACAAAGAAAAAGGAGCACGCTTGTAAAGGCAAAACCCGTGCGCGAAAAAA AAAGTTTTTCTGGGAAGCATCCCAAAGATCGTGTAGCACCCCAAAGATCG TGTACTCGTACAGATCGTCGCAGGGATATTGATTCGGGGGCAATAGCTCT TGAGAGCTGTTGGGCATATTGAAACAAGTATATCTTGG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig941:175800..180037-

>mRNA_A-nodosum_M_contig941.12.1 ID=mRNA_A-nodosum_M_contig941.12.1|Name=mRNA_A-nodosum_M_contig941.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1857bp|location=Sequence derived from alignment at A-nodosum_M_contig941:175800..180037- (Ascophyllum nodosum dioecious)
ATGAACCTTTTGGCAGGATACGGCAGTGGCGACGAGAACTCATCCGATGA
GAGCGGTGCAAGATCGGCAGCGCCTGCTCGGAAACAGACCATTACATCTT
TCCGGGCGCCGCGTGTGAACGCAGCTCCTCACGTTGTCGCATCTAGAGCG
ATGGACCAGGCTTCCTCTTCTCTTATGGCCCCACCTACGGGGATGCTGGG
CCTTAAAAATAGTACTCCGAAGGTGGGAAGTCAAATTATGATCCACAACC
CCAAGGCTGACCACTTCCGCGCACCTGTGCAAGGACCAGCACACCCGCAC
AAGCGAGAGTTGCCCGTCCCGGCCGGTGGGCGCGCCACGGGCACCGGCGG
CGTAATCGAGCAGACCTCTCTGGAAGATTGGTCCTTCCATGAGCAGTACC
ACACCTTCCACCAGTTCGGCTACGCGGTGGACTGTCGGGGCGACACCGTC
GGCAACCTTGCCGAGCACGGGAAGCGTCAGGGGGACACGGTTCTCACAGC
GGACGCCGGAGGCGTGCGACGCAAGCGGAAGAAGAGCGGCGGGGACGGGG
CAAATGAGGGTGGCGATGTCGGCGACGGAAACGAGGATGACGATCGAGAT
CTTGGTGAAACAGACACGGACAGCGTGTGGGCTCCGGAGGCACCGAGGGA
AAAAACGGACTTCGAGGCAGGCACGATGACCGAAGAGCAATCAAAATTCC
GAGAGGCTTGGGAGGCGGAGCAGGCAAAGAAACACCGCGAGTACAACATG
GAGGAGGACCACGACAGACGAGACGAACGCAAAATCTCGCACCTTCTTCC
GCCGAGGCACAACCGGGACACGGAGTCCAAGAAGGCGCGGTCTACATTCC
ACGGGAAGGCGCAGCACGACTACCAGGGGAGGTCGTGGATGGCGCCGCCT
GCCGGAGCAAGGCTCGAGGAGGAAGGGGAAGACCACCAGTGCTTCACGCC
CAAAAAGTGCATCCATCGGTACACAGGCCACACGAAAGGAGTGCAGGCGA
TCTCTTTCTTCCCGGGGTATGGGCACTTGCTTCTTTCGGCGAGCATGGAT
GGCACGGTGAAAATCTGGGACGTGAACGGGGGTAGAGGGCAGCGGCGGAC
GTACATAGGGCACGCCGCGGCCGTGCGCGACGTGCACTTTAGCAACGACG
GAAAGCAGTTCATCAGCGCCGGATACGACCGCTTTGTGCGGCAGTGGGAC
ACGGAGACGGGGCAGTGCCTGGGGACGTTCACCAACCGCAAGATGCCTTA
CTGCGCCAAGTTCTACCCGGTCGACAACAACATATTCTTGTGCGGCTGCT
CGGACAACCGCGTCGTACAATACGACGCCCGTTCGGGGGACGTTGTACAA
GAATACAATCACCACCTGGGGCCCGTCAACACGGTGCTCTTTGTGGATGA
CAACCAGCGCTTTGTCAGCACTTCCGACGACAAAAAGGTGTTGATATGGG
AGTACAACATCCCCGTGCCCATCAAGTACATCTCGGAGCCGGATATGCAC
TCCATGCCGGCGACGACTCTCCATCCTTCGGGAGGTTTCTTCGTGGGACA
GTCCCTTGACAACAAGATCGTCACGTGGACGGCCCGGGACAAATTCAGGC
AGATGCGGAAGAAGGAGTTCAAGGGCCACGTGAACGCGGGCTACGCCTGC
CGCATGGCCTTCAGCCCGAACGGAAAGTTCTTGGCGTCCGGGGACGGGCA
GGGGAAGATGTACATTTGGGACTGGGGGAGCACCAAGGTCTACCGTAAGC
ATCAGTGCCACGACGACGGCCCCTGTATCGACATTGCGTGGCATCCCCTG
GAGCCGAGCTGGGTTGCAACCGCGGGCTGGGACGGAGTTATAAAGCTTTG
GGACTAG
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