mRNA_A-nodosum_M_contig9351.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: A0A6H5JI70_9PHAE (5'-nucleotidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI70_9PHAE) HSP 1 Score: 301 bits (771), Expect = 2.570e-99 Identity = 152/260 (58.46%), Postives = 188/260 (72.31%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDDEGKMIGFKGKTYHVFNKLASPE--EPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKEVLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGLDLALEILGEVTAK 795
DFD TLTKFWVNG+ G SCH VI SGLL E +H +T ELRN YYP+E V PDL E +LE M +WV +AH+AMV G+TK + AVSKANL RPGH +L R ++ VPFL+FSAG+ADVLEE FRQ + P+PST VISNRM FD++G M GF G+ +HVFNK AS +PYF T+EM+ R+NVLLLGDSLGDL M+KG+ +E LT+GFLND V+E + Y+ AYD VI+GDG D LE+L +V +K
Sbjct: 47 DFDFTLTKFWVNGKRGDSCHAVIDGSGLLGEGFHKRTWELRNHYYPLE------VAPDLSPEMRLEMMVEWVTKAHDAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPFLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASASAVKPYFETDEMRCRSNVLLLGDSLGDLNMAKGLRAEETLTVGFLNDKVEERADAYLKAYDVVILGDGSFDFVLELLEQVASK 300
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: D8LDF4_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF4_ECTSI) HSP 1 Score: 299 bits (765), Expect = 6.720e-99 Identity = 148/260 (56.92%), Postives = 190/260 (73.08%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDDEGKMIGFKGKTYHVFNKLASPE--EPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKEVLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGLDLALEILGEVTAK 795
DFD TLTKFWVNG+ G SCH VI SGLL E +H +T+ELR+ YYP+E V PDL E ++E M +WV +AHEAMV G+TK + AVSKANL RPGH +L R ++ VP L+FSAG+ADVLEE FRQ + P+PST V+SNRM FD++G M GF G+ +HVFNK AS +PYF T+EM+ R++VLLLGDSLGDL M+KG+ +E+LT+GFLND ++E + Y+ AYD +I+GDGG D LE+L EV +K
Sbjct: 13 DFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLE------VAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKYGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVVSNRMAFDEDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKIEERTDAYLKAYDVIILGDGGFDFVLELLEEVASK 266
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: A0A835YMP4_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP4_9STRA) HSP 1 Score: 245 bits (626), Expect = 9.320e-78 Identity = 127/254 (50.00%), Postives = 173/254 (68.11%), Query Frame = 1
Query: 37 LTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDD-EGKMIGFKGKTYHVFNKLASP--EEPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKEVLTIGFLNDNVDEMLEEYMDAYDAVIVG-DGGLDLALEILGEV 786
L F VNG G SCH + GLL+E+YH L+ +YYP+E +D L E+++ M++WV +AH+A+ + G+TK+TI +AV +AN+ LR H +LF L+ +P LVFSAGLADVLEE+ RQ A AP+P+ HVISNRM F+ G IGF G+ +HVFNK A +EPYF +EE+K R NVLLLGDSLGDL+M+ G+E EVL++GFLND +E + Y+ YD VI+G D GL AL+++ E+
Sbjct: 23 LHSFMVNGRRGSSCHGCLEYCGLLTEEYHRTVQALKQKYYPLE------LDTSLTQEQRVAFMEEWVEQAHDALSQAGLTKATIEQAVREANIALRGAHAELFTELDARAIPLLVFSAGLADVLEEVIRQHASAPLPAGAHVISNRMSFEPANGGFIGFTGQLFHVFNKRAGAVLDEPYFMSEEVKLRRNVLLLGDSLGDLQMASGLEADEVLSVGFLNDQAEERIGSYLAGYDVVIIGPDAGLQYALDLVREL 270
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: A0A7S3UTG8_HETAK (5'-nucleotidase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTG8_HETAK) HSP 1 Score: 210 bits (534), Expect = 4.980e-63 Identity = 114/247 (46.15%), Postives = 152/247 (61.54%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDDEGKMIGFKGKTYHVFNKLASP--EEPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKEVLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGL 756
DFD TLTKF +G+MG S H V+A +LSE+YH L +RYYP+E +P + EK+ AM +W H A+VE G+T+ + AV+ A ++LR G LF E VP L+FSAGL DVL E+ Q P+PS HVISN MEFD GK++GF +HV+NK A + P+F E ++ R N+LL+GDS GD +M+ G+E VL IGFLN V+E ++ Y YD V+ GDGGL
Sbjct: 93 DFDYTLTKFHYDGKMGKSTHGVLAECDMLSEEYHRTARALFDRYYPVET------NPSMSQAEKVPAMVEWWEADHAALVEHGLTRDVLRSAVAAAGVQLRAGCVDLFDWAEGRGVPVLLFSAGLGDVLTEVLAQNLNKPLPSHVHVISNTMEFDATGKLVGFPPPLFHVYNKNAGAVKDHPFFG-ESVQARKNILLIGDSTGDARMADGLEGTTVLRIGFLNTKVEERMDTYKGLYDVVLTGDGGL 332
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: A0A7S3LZW9_9STRA (5'-nucleotidase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZW9_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.280e-62 Identity = 118/265 (44.53%), Postives = 169/265 (63.77%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKA----NLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDD--EGKMIGFKGKTYHVFNKLASP--EEPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKE--VLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGLDLALEILGEV 786
DFD T+TKF++NG G SCH +I + GL++ +YHD+ L+ +YYP+E VDP L EEK + M +WV +AHE + G+T+S + AV A + LR D L + KVP L+FSAG+ADVLEEI R++ S HVISNR F++ EGK+ GF+ HVFNK ++ +F TE++K RTN+LLLGDSLGD+ MS+G+E + ++ +GFLND V+ M ++Y++ YD VI+ D G D+ +L E+
Sbjct: 79 DFDFTITKFYMNGVRGASCHKIIEDCGLMAAEYHDEAQGLQAKYYPLE------VDPTLNMEEKTKFMIEWVEKAHELLELHGLTRSVVTRAVHSALATGKVGLREKADTFLSLASSSKVPSLIFSAGIADVLEEILREQMAVDW-SQVHVISNRCIFEESGEGKVTGFEQPLLHVFNKKSTAYLHTNFFNTEDIKDRTNLLLLGDSLGDITMSEGMEINDDRIIKVGFLNDRVERM-DQYLEKYDVVILDDPGFDIPYYLLQEI 335
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: UPI001401F492 (cytosolic 5'-nucleotidase 3A isoform X1 n=2 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001401F492) HSP 1 Score: 204 bits (520), Expect = 5.460e-61 Identity = 112/258 (43.41%), Postives = 161/258 (62.40%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDDEGKMIGFKGKTYHVFNKL--ASPEEPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIE-TKEVLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGLDLALEILGEV 786
DFD TL+KF NG+ +CH VI N L+SED K ++RN+YYP+E VDP + E+K M +W +AH +VE G+ K + V ++++ LR G++ F L +P +FSAG+ DVLEE+ Q S V+SN M+FD++G + GFKG+ HV+NK A YF +++K N++LLGDSLGDL M+ G++ T+ +L IGFLND V+E LE+YMD+YD V+VG+ LDL IL ++
Sbjct: 83 DFDMTLSKFLHNGKRCSTCHNVIDNCKLISEDCRKKLVQIRNKYYPIE------VDPTISTEDKYPFMVEWWTKAHNLLVEQGIRKEKLAAVVRESDVTLRDGYELFFDKLNERNIPVFIFSAGIGDVLEEVITQ--VGVFHSNVKVVSNFMDFDEKGVLKGFKGELIHVYNKRDGALRSSEYF--DKLKDNCNIILLGDSLGDLNMADGVQNTESILKIGFLNDKVEESLEKYMDSYDIVLVGEESLDLVNAILQKI 330
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: A0A0D2U9Z3_CAPO3 (5'-nucleotidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U9Z3_CAPO3) HSP 1 Score: 206 bits (523), Expect = 1.120e-60 Identity = 115/257 (44.75%), Postives = 155/257 (60.31%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDDEGKMIGFKGKTYHVFNK--LASPEEPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKEVLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGLDLALEILGEV 786
DFD TLT+F NG+ G S H +I +S +L E YH+ T L + YYPME VDP L EK+ M W AHE +++ M K I E V AN+ R ++LF LL +P L+FSAG+ +V++E +A + HVISN MEFD EG GF GKT HV+NK + + P ++ + R NV+LLGDSLGDL+MS+G++ +LTIGFLND V E LE Y A+D VI+GDG +DL ++ +
Sbjct: 136 DFDMTLTRFLYNGKRGASSHGIIEHSHMLEEAYHEATHNLFSTYYPME------VDPTLTQAEKIPHMVAWWESAHELLIKHRMNKKLIPEMVRGANIGFRERTNELFDLLHASNIPLLIFSAGIGNVIKEALAIKAR--LHPNMHVISNFMEFDAEGYTSGFAGKTIHVYNKQDVVVKDSPVHKS--IADRHNVILLGDSLGDLQMSRGVDVDNILTIGFLNDKVAERLESYKQAFDVVILGDGSVDLVYNLISMI 382
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: UPI0001FE3700 (5'-nucleotidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE3700) HSP 1 Score: 206 bits (523), Expect = 2.840e-60 Identity = 115/257 (44.75%), Postives = 155/257 (60.31%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDDEGKMIGFKGKTYHVFNK--LASPEEPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKEVLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGLDLALEILGEV 786
DFD TLT+F NG+ G S H +I +S +L E YH+ T L + YYPME VDP L EK+ M W AHE +++ M K I E V AN+ R ++LF LL +P L+FSAG+ +V++E +A + HVISN MEFD EG GF GKT HV+NK + + P ++ + R NV+LLGDSLGDL+MS+G++ +LTIGFLND V E LE Y A+D VI+GDG +DL ++ +
Sbjct: 173 DFDMTLTRFLYNGKRGASSHGIIEHSHMLEEAYHEATHNLFSTYYPME------VDPTLTQAEKIPHMVAWWESAHELLIKHRMNKKLIPEMVRGANIGFRERTNELFDLLHASNIPLLIFSAGIGNVIKEALAIKAR--LHPNMHVISNFMEFDAEGYTSGFAGKTIHVYNKQDVVVKDSPVHKS--IADRHNVILLGDSLGDLQMSRGVDVDNILTIGFLNDKVAERLESYKQAFDVVILGDGSVDLVYNLISMI 419
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: A0A7S0WMC1_9CHLO (5'-nucleotidase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WMC1_9CHLO) HSP 1 Score: 201 bits (511), Expect = 6.940e-60 Identity = 108/260 (41.54%), Postives = 162/260 (62.31%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDDEGKMIGFKGKTYHVFNKLASPEEPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKEVLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGLDLALEILGEVTAKAD 801
DFDRTLT VNG+ G SCH V+ + LS++Y ++T EL +YYP+E +L + EK+ M++W +AHE ++ G+T I +AV ANL LRPG + ++L+ VPFL+FSAG+A+V+ E+ +Q+ ST HV+SN M FD EG GF H+FNK S + + ++ R V+LLGD LGD+ M++GI + VL +GFLND V+E+L Y + YD ++ DG +D+ +E+L E+ A+ +
Sbjct: 57 DFDRTLTMCRVNGKTGASCHGVMESLETLSKEYREQTGELFKKYYPIEICHNLTIP------EKIPIMEEWYSQAHELLLREGVTLEHIRDAVMGANLALRPGVCDVIKMLQCNDVPFLIFSAGIANVISEVLKQKFGELKDST-HVVSNWMYFDKEGSHNGFSEPLIHMFNKNESQTKGTDYRKAVEQRQFVILLGDGLGDVTMAEGIPHEVVLKVGFLNDKVEELLPLYKEVYDIIVTNDGSMDVVVELLREIPARVE 309
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Match: A0A821H0I8_9NEOB (5'-nucleotidase n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821H0I8_9NEOB) HSP 1 Score: 201 bits (511), Expect = 1.120e-59 Identity = 110/259 (42.47%), Postives = 157/259 (60.62%), Query Frame = 1
Query: 22 DFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRYYPMEARDHLGVDPDLPHEEKLEAMKQWVLEAHEAMVETGMTKSTIVEAVSKANLELRPGHDKLFRLLETEKVPFLVFSAGLADVLEEIFRQRAEAPVPSTCHVISNRMEFDDEGKMIGFKGKTYHVFNKLASPEEPYFRTEEMKGRTNVLLLGDSLGDLKMSKGIETKE-VLTIGFLNDNVDEMLEEYMDAYDAVIVGDGGLDLALEILGEVTAK 795
DFD TL++F NGE +C+ +I NS ++SED K +L N YYP+E +DPD EEK M +W +AH + E + K + + V ++ LR G++K F L ++P +FSAG+ DVLEEI RQ S V+SN M+FDD G + GFKG H +NK S + +++ R+N+LLLGD+LGDL MS+G+ T E +LTIGFLND V E+ ++++ +YD V++ D LD+ IL VTAK
Sbjct: 77 DFDMTLSRFKYNGERSPTCYNIIDNSKIISEDCRKKLKDLFNIYYPLE------IDPDRTTEEKFPLMVEWWSKAHTLLCEQRIEKQKLSQVVKESQARLREGYEKFFDSLYHSEIPLFIFSAGIGDVLEEIIRQAGV--YHSNIKVVSNYMDFDDHGVLTGFKGDLIHTYNKNNSVLKDTAYFQQISHRSNILLLGDTLGDLTMSEGVTTVENILTIGFLNDKVKELTDQFLQSYDIVLIADETLDVVNGILNFVTAK 327 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9351.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9351.1.1 >prot_A-nodosum_M_contig9351.1.1 ID=prot_A-nodosum_M_contig9351.1.1|Name=mRNA_A-nodosum_M_contig9351.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=268bp MYRDFSQDFDRTLTKFWVNGEMGYSCHMVIANSGLLSEDYHDKTTELRNRback to top mRNA from alignment at A-nodosum_M_contig9351:9296..13818- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9351.1.1 ID=mRNA_A-nodosum_M_contig9351.1.1|Name=mRNA_A-nodosum_M_contig9351.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4523bp|location=Sequence derived from alignment at A-nodosum_M_contig9351:9296..13818- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9351:9296..13818- >mRNA_A-nodosum_M_contig9351.1.1 ID=mRNA_A-nodosum_M_contig9351.1.1|Name=mRNA_A-nodosum_M_contig9351.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at A-nodosum_M_contig9351:9296..13818- (Ascophyllum nodosum dioecious)back to top |