mRNA_A-nodosum_M_contig932.17.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig932.17.1
Unique NamemRNA_A-nodosum_M_contig932.17.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A6H5JIL0_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIL0_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 5.870e-124
Identity = 188/257 (73.15%), Postives = 220/257 (85.60%), Query Frame = 1
Query:    1 YGLLFATQAWLSAAILFPFCFLAAALSAVFDWRRMRLPTMVALWWGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDIPVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMKDLIAEARRAVGDALEDWQKPLEAIPPSQ----SPS*PP 759
            YGLLFATQAW +A ++FP C L+A ++ +FDWRRMR PT VA+ WGR  + NMGVRP+VEGAELLPP  EAVVFVANHGSYLDIPVTN LPR+CKYLMKAELLWLPIVGWKA++ARDIFVHR T  TFR+L+++TT +LKAGNSI+TFPEGTRS+DGRLG+FKRGPFTMAQ+AGVR+VP+TITGV +AMPPFA+APL KPR VRLV+H  I+TEG+P+KDLIAEAR+AV D LEDWQKP   +  S     SPS PP
Sbjct:   52 YGLLFATQAWFTALLMFPLCLLSALVAPIFDWRRMRPPTAVAVLWGRLALWNMGVRPKVEGAELLPPRGEAVVFVANHGSYLDIPVTNCLPRMCKYLMKAELLWLPIVGWKAVLARDIFVHRGTSTTFRQLLRSTTRTLKAGNSIMTFPEGTRSRDGRLGKFKRGPFTMAQQAGVRVVPLTITGVTEAMPPFAMAPLCKPRSVRLVVHPAISTEGKPVKDLIAEARKAVSDGLEDWQKPRPKVDASSNGDASPSTPP 308          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A835YT11_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT11_9STRA)

HSP 1 Score: 227 bits (579), Expect = 9.170e-62
Identity = 117/244 (47.95%), Postives = 162/244 (66.39%), Query Frame = 1
Query:    1 YGLLFATQAWLSAAILFPFCFLAAALSA-------VFDWRRMRLPTMVALWWGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDIPVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMKDLIAEARRAVGDALEDWQ 711
            YGLL+A  + L+  ++FP   +   L+        + D +R+R+ +     W R  +L+MG+RP+VEG   LPPP E VVF+ NH S+LD+PVT FLPRL KYL KAEL W+P++GWKA++A DI V R   ++FRRL+   + SL+AGN +V FPEGTRS+ G L  FK+GPF MAQKAGVR+VP++I GV + MPP ALAPL+KP  V +VIH P+      ++  +  AR A+   L  ++
Sbjct:  119 YGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDVPVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPA-VTIVIHAPVDPAVEGVEGAMRSARAAIASGLPRYE 361          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A7S3Y5W9_HETAK (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5W9_HETAK)

HSP 1 Score: 192 bits (487), Expect = 1.540e-50
Identity = 105/243 (43.21%), Postives = 150/243 (61.73%), Query Frame = 1
Query:    4 GLLFATQAWLSAAILFPFCFLAAALSAVFDWRRMRLPTMVALWWGRRVMLNMGVRPR-VEGAELLPPPEEAVVFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMKDLIAEARRAVGDALEDWQKPLEA 726
            G  F     L+ A+LFPF  L+   +  FD RR R       WW +  ML++  RP+ + GAE LP   E V+++ANH S+LDI  ++ FLPR  KY+ K E+L +P++GW   +A  I V R    +    VK+T  SLK GNS+  FPEGTR++ GR+G+FK+GPFT+A+KAG R+VP+++  V K  P +A+ PL +P DVR+VIH PI  +     +L+  A  A+   L D+Q+PL A
Sbjct:  102 GFFFLFNTMLTCALLFPFTVLSYLWAMAFDRRRRRAVDNCVHWWAKLSMLSVFYRPKEIVGAEHLPDDAEGVLYLANHTSFLDILTLSGFLPRNFKYVSKVEILKIPLIGWAMQMAAHIAVRRMDRRSQIETVKSTIQSLKDGNSVTMFPEGTRTKTGRMGDFKKGPFTIAKKAGARVVPISLCNVTKWFPSWAVMPLGRPTDVRVVIHPPIDPKDLTEAELMERAFAAIESGLPDFQRPLPA 344          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A7S2B9X1_9EUKA (1-acyl-sn-glycerol-3-phosphate acyltransferase (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B9X1_9EUKA)

HSP 1 Score: 174 bits (440), Expect = 7.480e-46
Identity = 91/196 (46.43%), Postives = 124/196 (63.27%), Query Frame = 1
Query:   49 FPFCFLAAALSAVFDWRRMRLPTMVALWWGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDIPV-TNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPI 633
            +PF   A     +FD +R R    V   W R  M+  G + +V G E LPP +E V++  NH S+LDI V + +LPR CKY+ K E+L +P++GW    A+ I + R   A+  + +K    +LK GNS+VTFPEGTRS+DGRL +FK+G FTMA +AGVR+VP+TI G     PP A  PLA PR VR++IH P+
Sbjct:   39 YPFVLSAVLFGILFDNKRRRFVDRVVQAWARGTMVFFGAKIQVFGLENLPPIDEPVMYTPNHCSFLDIFVLSGYLPRPCKYISKIEILRIPLIGWAMAFAKHIAIRRMDRASQLKTLKDAIETLKDGNSLVTFPEGTRSKDGRLLDFKKGAFTMASRAGVRVVPITIVGTHLYQPPGAFVPLAVPRGVRIIIHPPL 234          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A7S2UXA9_9STRA (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA9_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.170e-45
Identity = 99/238 (41.60%), Postives = 143/238 (60.08%), Query Frame = 1
Query:    4 GLLFATQAWLSAAILFPFCFLAAALSAVFDWRRMRLPTMVALWWGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMKDLIAEARRAVGDALEDWQK 714
            GL +   A+L   + +PF          FD     L   V   W R  ML+M  +P+VEG E LPP +E VVF+ANH S+LDI  ++ FLPR  KY+ K E+L +P++GW    A  I + R ++A+  ++ +    SLK GNS+  FPEG+R++DGR+   K+GPFT+A++AGVRIVPV++  + +  PP A  PL  P+D  L IH PI T+G+   +++   R A+   L DWQK
Sbjct:  110 GLCYLFWAFLWCGLSYPFLVPFWVWCLAFDRNCRCLVDEVVSIWARLSMLSMFYKPKVEGLENLPPKDETVVFMANHQSFLDIFTLSGFLPRRFKYISKVEILRIPLIGWAMNFAGHIAIQRASVASQIQVFRDAIKSLKDGNSVCIFPEGSRTRDGRMLPLKKGPFTIAKRAGVRIVPVSLGELFRYNPPSAWLPLGIPKDAVLKIHPPIETKGKSEAEVMELVRIAINSGLPDWQK 347          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A8J5X9N9_DIALT (PlsC domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9N9_DIALT)

HSP 1 Score: 176 bits (446), Expect = 1.320e-45
Identity = 106/244 (43.44%), Postives = 144/244 (59.02%), Query Frame = 1
Query:    1 YGLLFATQAWLSAAILFPFCFLAAALSAVFDWRRMR-LPTMVALWWGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHR----QTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMKDLIAEARRAVGDALEDWQK 714
            Y + F     LS  + +P   +A+A S +FD +R R +  +VALW    + L    R RVEGAE LP   +  +F  NH S+LDI  ++ FLPR  KY+ K E+L +P++GW   +A  I + R      +ATFR  V      LK GN++VTFPEGTRS  G LG+FK GPF MA  AGV +VP++I     AMP  +L P+ +   +R+V+H PIAT+GR   DL AEAR AV   L +W +
Sbjct:   82 YSVFFLVLNVLSLCVAYPLLAVASAWSFLFDRKRRRAIDAVVALWARLCLTLFFFSRVRVEGAEHLPARGQPALFTPNHCSFLDIFALSGFLPRPLKYVSKVEILRIPLIGWAMQLAGHIALRRADRKSQLATFRDSV----ACLKDGNNLVTFPEGTRSPTGVLGQFKAGPFKMAATAGVPVVPISIVNTQYAMPVSSLLPIRRASGMRIVVHPPIATQGRDSADLCAEARAAVSSGLPEWMR 321          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A7S1U818_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U818_9STRA)

HSP 1 Score: 174 bits (441), Expect = 8.350e-45
Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 1
Query:   97 RRMRLPTMVALW-WGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMKDLIAEARRAVGDALEDWQKPL 720
            R  R+  +V LW W    M  MG +  V G E LPP  E ++ V NH S+LDI  ++ ++PR  KY+ K E+L LP++GW   +A+ I + R + A+  R +K    S+K GNS+VTF EGTRS+DGRL  FK+GPFTM ++AGVRIVPV+I G+ K  P +A  PLA P+ V L IH PI T+GR   D++ E   AV   + + Q+PL
Sbjct:  118 RNGRVDKVVRLWAWA--AMRLMGYKAEVIGLENLPPASEPIMVVPNHTSFLDIFTISAYVPRNLKYISKVEILRLPLIGWAMRMAKHIAIRRSSRASQIRTLKEAVDSMKDGNSLVTFAEGTRSKDGRLMRFKKGPFTMTKRAGVRIVPVSIRGLYKWHPKWAWLPLATPKGVTLKIHPPIETKGRNADDVLEETYNAVLSGMPEDQRPL 325          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A0G4G8W7_9ALVE (PlsC domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G8W7_9ALVE)

HSP 1 Score: 176 bits (446), Expect = 4.620e-44
Identity = 101/242 (41.74%), Postives = 147/242 (60.74%), Query Frame = 1
Query:    4 GLLFATQAWLSAAILFPFCFLAAALSAVFDWRRMRLPTMVALWWGRRVMLNMGVRPRVEGAELLPPPE-EAVVFVANHGSYLDIPVTN-FLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMKDLIAEARRAVGDALEDWQKPLE 723
            GL++ +  +L AA  +P    A  +S   + ++  L  MV   W R  + N  + P+VEG E LP  + E ++ VANH S+LDIPV + FLP   KY+ K E+L +P++GW   +AR + +HR    +  +  + T   LK G S+  F E TRS+DGR+ +FK G   MA+KAGVR++PV++ G+  + PP AL P+A PRD RLVIH PI T GR + D++ EA  AV + L + QKP +
Sbjct:  202 GLVWMSLVFLWAAFWYPLLICAFLVSEGVNDKKRSLVDMVVAVWSRFCLWNATLNPKVEGLENLPKDKSEPLLIVANHSSFLDIPVLSAFLPIRFKYISKVEVLSIPLLGWAMQMARHVAIHRGDRRSSLKTFRETVNLLKEGASVCAFAEETRSRDGRVRKFKPGTLKMAEKAGVRVLPVSLCGLHSSFPPDALLPVAVPRDARLVIHPPIETRGRSVDDVVNEAWEAVVEGLPEAQKPKQ 443          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: A0A7S4B0Q0_CHRCT (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0Q0_CHRCT)

HSP 1 Score: 172 bits (435), Expect = 5.690e-44
Identity = 96/217 (44.24%), Postives = 136/217 (62.67%), Query Frame = 1
Query:   79 SAVFDWRRMRLPTMVALWWGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMK-DLIAEARRAVGDALEDWQKPLE 723
            S VFD  R R    +   W R  +  +    RVEG E LPP +EAV++V NH S+LDI  ++ +LPR  KY+ K E+L +P +GW    A+ I + R   A+  + V+     LKAG+S+VTFPEGTRS+DGRL EFK+GPF+MA KA VR+VP++I G     PP +  P+A+PR V+LV+H P+   G+  + + + +AR AV  AL    +PL+
Sbjct:  114 SLVFDRSRRRACDWIVQIWARCTLSLLFSDIRVEGLENLPPRDEAVMYVPNHCSFLDIFALSGYLPRRFKYISKIEILRIPFIGWAMQFAKHIAIKRMDRASQVQTVRDAVDCLKAGSSLVTFPEGTRSKDGRLMEFKKGPFSMAAKAQVRVVPISIIGTHLFQPPGSAFPMARPRGVKLVVHPPLDAPGKKKEQETLEQARAAVLSALPKSMQPLK 330          
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Match: R1E6C8_EMIHU (PlsC domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E6C8_EMIHU)

HSP 1 Score: 171 bits (432), Expect = 1.580e-43
Identity = 105/266 (39.47%), Postives = 145/266 (54.51%), Query Frame = 1
Query:    1 YGLLFATQAWLSAAILFPFCFLAAALSAVFDWRRMRLPTMVALWWGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKTTTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITGVM-------KAMPPFA---------------LAPLAKPRDVRLVIHKPI-ATEGRPMKDLIAEARRAVGDALEDWQKPLEA 726
            +G+ FA         ++P    A   S +FD  R R    V  WW R  +   G +  +EG E LPPP EAV++V NH S+LDI  ++ FLPR  KY+ K E+L +P+VGW    A+ I + R    +  + +K    +LKAGNS+VTFPEGTRS+DG LG FK+GPFTMA +AGVRIVP+++ G          A PP +                 P+A PR VR+++H P+ A   +   + +A AR AV   L    +P EA
Sbjct:   72 FGITFALLTAFVVTGIYPLVISATIYSKLFDNERRRANDYVVQWWARTTLTLFGAKVALEGQENLPPPGEAVMYVPNHCSFLDIFSLSGFLPRRFKYISKIEILRIPLVGWAMGFAKHIALARTDRKSQLKTLKEAVETLKAGNSLVTFPEGTRSKDGVLGSFKKGPFTMAARAGVRIVPISVVGAAARDLAYSSATPPRSRLGTFPVGTHVFGTGALPIAIPRGVRIIVHPPLDAPVAKQEDESMAAARAAVLSGLPAAMRPAEA 337          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig932.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIL0_9PHAE5.870e-12473.15PlsC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YT11_9STRA9.170e-6247.95PlsC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S3Y5W9_HETAK1.540e-5043.211-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7S2B9X1_9EUKA7.480e-4646.431-acyl-sn-glycerol-3-phosphate acyltransferase (Fr... [more]
A0A7S2UXA9_9STRA1.170e-4541.601-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A8J5X9N9_DIALT1.320e-4543.44PlsC domain-containing protein n=1 Tax=Diacronema ... [more]
A0A7S1U818_9STRA8.350e-4546.19Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4G8W7_9ALVE4.620e-4441.74PlsC domain-containing protein n=1 Tax=Chromera ve... [more]
A0A7S4B0Q0_CHRCT5.690e-4444.241-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
R1E6C8_EMIHU1.580e-4339.47PlsC domain-containing protein (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig932contigA-nodosum_M_contig932:154232..157884 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTF6
PFAMsAcyltransferase
Model size2414
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.66e-115
EggNOG OGsCOG0204@1|root,KOG2848@2759|Eukaryota
Ec32 ortholog description1-acyl-sn-glycerol-3-phosphate acyltransferase
Ec32 orthologEc-02_006160.1
EC2.3.1.51
Description1-acylglycerol-3-phosphate O-acyltransferase activity
Cds size651
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig932.17.1prot_A-nodosum_M_contig932.17.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig932 154334..156223 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870415.2996392-UTR-A-nodosum_M_contig932:154231..1543331680870415.2996392-UTR-A-nodosum_M_contig932:154231..154333Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig932 154232..154333 +
1680870415.4449031-UTR-A-nodosum_M_contig932:156223..1578841680870415.4449031-UTR-A-nodosum_M_contig932:156223..157884Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig932 156224..157884 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870415.3919518-CDS-A-nodosum_M_contig932:154333..1545161680870415.3919518-CDS-A-nodosum_M_contig932:154333..154516Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig932 154334..154516 +
1680870415.4033868-CDS-A-nodosum_M_contig932:155133..1552961680870415.4033868-CDS-A-nodosum_M_contig932:155133..155296Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig932 155134..155296 +
1680870415.4155157-CDS-A-nodosum_M_contig932:155609..1557581680870415.4155157-CDS-A-nodosum_M_contig932:155609..155758Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig932 155610..155758 +
1680870415.431369-CDS-A-nodosum_M_contig932:156067..1562231680870415.431369-CDS-A-nodosum_M_contig932:156067..156223Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig932 156068..156223 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig932.17.1

>prot_A-nodosum_M_contig932.17.1 ID=prot_A-nodosum_M_contig932.17.1|Name=mRNA_A-nodosum_M_contig932.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=217bp
MRLPTMVALWWGRRVMLNMGVRPRVEGAELLPPPEEAVVFVANHGSYLDI
PVTNFLPRLCKYLMKAELLWLPIVGWKAIVARDIFVHRQTIATFRRLVKT
TTGSLKAGNSIVTFPEGTRSQDGRLGEFKRGPFTMAQKAGVRIVPVTITG
VMKAMPPFALAPLAKPRDVRLVIHKPIATEGRPMKDLIAEARRAVGDALE
DWQKPLEAIPPSQSPS*
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mRNA from alignment at A-nodosum_M_contig932:154232..157884+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig932.17.1 ID=mRNA_A-nodosum_M_contig932.17.1|Name=mRNA_A-nodosum_M_contig932.17.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3653bp|location=Sequence derived from alignment at A-nodosum_M_contig932:154232..157884+ (Ascophyllum nodosum dioecious)
TACGGCCTCCTGTTCGCGACGCAGGCGTGGCTGTCCGCTGCCATCCTCTT CCCATTTTGCTTCCTGGCGGCCGCCCTCTCCGCCGTATTCGACTGGCGAA GAATGCGTCTGCCGACGATGGTCGCGCTCTGGTGGGGCAGACGAGTGATG CTCAACATGGGGGTAAGGCCCAGGGTGGAGGGGGCGGAGCTACTCCCGCC GCCCGAGGAAGCGGTCGTATTCGTGGCGAACCACGGCTCGTACCTCGATA TCCCTGTCACGAACTTCTTGCCGCGATTATGTAAGGTGGGTAGGGGAACT AAGGGCAGTGAGCTCTTCGTAGCTTGGCCTTTTCACGTCGCCTCGTGGAC AACGCGATTTTTGGGGCTTCAGCGTTGGAATGGTTACATGTCCCGCGGGG TGGAAGATTACGGGATGCGCGGGCGTTCCACGCAGTGTTATCGCAGGAGG TGGTCTAGCCCTTTGCCCCAGCTATTTTTGCTGTAGGCGCTCCTGCCGTC AGTCAGCGTTGGCGAGCATAACGGTTATGGTTTGAGGCCGAGATTCGCGG TTAAAGTCGATGGAGGGCTATGTACACGACGGCACATGACGTTTGACAAA CTGTTGCTGTTGTGCAGTTTTAAAGCTCTACATGGTGAGGTTTTGTTTCT GTCGCTGAAAACGTAGGCGCCTCAACTTTTGGGGTAGAAACCGTTTTTTC CCGTTGCCCCCCCCCTCCAAATTCGGTTTCTTGTAAGGTGACTCACACGC ATATACTGTAAGATCAAAATTGAATAAAAAACGTTGAAACGCAATAACTC GCACCCGCCCGGGTAGCCGGAAGGACGCATGATCGAACGGTGCGCCGTGC GACGTCAGTAAATGTACCTCACCTACCTCGATGAATCTCGTGGGTACGGC AGTACCTGATGAAGGCAGAGCTGCTCTGGCTGCCGATCGTGGGATGGAAG GCGATCGTGGCGAGAGACATATTTGTGCACAGGCAGACTATCGCTACATT TCGGCGCTTGGTGAAGACGACGACCGGGTCGCTCAAGGCGGGAAACTCTA TCGTCACCTTCCCAGGTACTGCTGTGCGAATCAATCCACCGATTGCTTCT CGGGGACCCGGCCGGCCCTTCCTTCTTTACCGACCCGTAGATGGCTCAAC GGCACATCATCGGCCTCATCTACCTACGGACGTCGTGGGTCGATGCAACA GCGCGGTGTGGCCTAGCCGTAAAGGGTGGGCAAAGTGGTAGCATTTTGTA GCGGGAGAACAACGGTACTGTACTTCGTCCCACCCTTCCTTGCTCCGTGA CGCCTGCCACGCCTTCTAGTGAAGCGTTGCGCCGCTCTTTGGCTTTGCAT CGATCCGCTCCCGTGTTCCTTTTTGCAGAGGGAACCCGGAGTCAAGACGG ACGCCTGGGAGAGTTCAAGCGCGGACCTTTTACGATGGCGCAGAAGGCGG GGGTGCGCATCGTGCCCGTGACCATCACCGGAGTGATGAAAGCGATGCCG CCGTTTGCCCTGGCGCCGCTCGCCAAGGTGAGGTTCGCGGTTGGCCCAGG CATCTCATTGTCCGCTGCTTCCTTCGCCGCGGGGCATGCCGTATCTTGAC TGTGTAGCGACCTGTGGGGGACTGCAGAGGATGTTTCCCGACACGCAAAG CCTGGAGAAAGTCTATCGGACCGTACACGATATTGGCTTCCCCAAGCTCC TTCCCCTGCCCTCATCTTTTCACCCGCTTCCTTCTCCTGCTCATGCTTGT CCTCCACATGCAAAAAACCCGCCGTTGCGATCCGGTGGTGGGGCGGACGG CGCACGACGGGGGACGGTGCGCTGCTGTGAACACAGCCACGAGACGTGAG GCTCGTGATCCATAAGCCAATTGCCACCGAAGGACGACCGATGAAGGACT TAATCGCGGAGGCAAGAAGAGCAGTGGGCGACGCATTGGAAGACTGGCAG AAGCCGCTCGAGGCAATCCCGCCTTCGCAGTCGCCAAGCTAGCCTCCATG AAAGCAATCGACCTTTCGCGGCATCTCTATGGGATAATAGATCCACCTGC TCGTCAACGGTAGTTCTTGCACGGCGAGGTAAGAGGCCGACTGCCAAGAT TTAAATCACGTAAAGGAGTCGGTATCGTGACGGGGCGAGCATTTGGCGGT TAACGAAGAATGGTTAATAAATAGACCAGAGGGTTTTGCTGTATAGTGAA AGTGAGAAAGATAGATGCGCCACTTTTGCTCCTGTCTTGGGGAGGCTGAG GGGATGTGGGTTCGAAGCAGAGCGGCGCGGCCCTGCCGGTAGTCGTGCGG GGGGTGATGTGAGGGTTCCGTTACGTCGCCACGTGTGAAATATTTTACTC GCGGCCTATGATGTTGGTGTTGACGGTGCTCAGTTCTGCTTTCGAGTAAG GATGAAATATGGCCCAGGGTAGCCGGGGTAAGTTATGATGTTGGTTTTGG GGAGCGAGCGAAAGCGGAGCTCTTCGCTTTCCCTTTTGTCGCTATTTTTT CCTCTCGTATTGATTTTGTGTCGAGTAGCACGATGTTTTACAGCGGTTTT CGGGGCGCCGTTAGACGGAGGAACTTGGGGGTAAAATAGGGGTCGAGGAG ACCAGGCACCACACACAAATCGACGAGGGATGTCTGCGGTCGTGGGTGAA ATAAGGTATTTCGAGGATATAGTGAAACAGCACTCCGCAGACGAATCGGA GAAGCGAAGTCTGACTCGGATAAACTCCGCGACGGGATCGAGGTCTACTT GCAATGTACCTATTCCAGACGAAAGCGTGTGAAAGTTGGGGGGAACTACG CCCGTTACAGTTACATGATCTGTAACTGTAACGGGTGAGGTGAAAAGCCG GGCGTGAAAGGGAAACAGGCCCGGAAAAGGTTATTGAAATAAAAATAACA AGACCACGCGTACCGGGTTGGTTGTGTGTGAGACGTGTCTGAGCGACGTG CCCTCGATGGGCGGGCGCAGCGAGAGTCTCGCTTTTCTGGAAAAAATTGC GTTTGTTCTTAGTTGAGAAGAGTATCATCTGAGGCGTCAACCGTGTTACC GTGTAAACTATAATATAAATTCTAAGGCGAGGATGACACGACCCCGTTCA ATAGGGGACTCGTCGGAAATTCGAAAAGGCTTTTGGCAGTCAGCGAGCGA TATGCGGCAATCGGTGGATTGAGGACGTAGCATCTTGATCTATTTATCCT CTTGGGGAGAGACCACCTCGTGTGAAACAAACATGGTACATCTAACTAAC GACTCCTCGATTAGGTGCGTCGATGATTTGCATTTGCACTTGTACCGGTT CCACATGCTGGTATTCGAGAGGGCGCGGATAGTTAGGCTTGATGAAGTTT TACGATAGCAAAGACAGCAGTACTGTACAGCCAGGAGTCTGGAGCATAAT ATTTTGCCAAATAGTTAGGACATGAAACAGGTTGCCAGACCTTTTCTTTT TGTTCCCTTCCCTGTTCAGCAGACCACGAGCGGGATTGGCCACCGTGTAA AATAGCTTTTTCGGTTTGGCAACCAATGCGGCGAATGTGAGAAACATCAA AGGCTCGAGCGGATGGAACAAAGTGGACGTCTCTACTGCTAATAATTTAC CTCAAAGTGCGTTCTCAAAGCTTACGATCCATTGGCATTTTTTTATATCG AGC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig932:154232..157884+

>mRNA_A-nodosum_M_contig932.17.1 ID=mRNA_A-nodosum_M_contig932.17.1|Name=mRNA_A-nodosum_M_contig932.17.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=651bp|location=Sequence derived from alignment at A-nodosum_M_contig932:154232..157884+ (Ascophyllum nodosum dioecious)
ATGCGTCTGCCGACGATGGTCGCGCTCTGGTGGGGCAGACGAGTGATGCT
CAACATGGGGGTAAGGCCCAGGGTGGAGGGGGCGGAGCTACTCCCGCCGC
CCGAGGAAGCGGTCGTATTCGTGGCGAACCACGGCTCGTACCTCGATATC
CCTGTCACGAACTTCTTGCCGCGATTATGTAAGTACCTGATGAAGGCAGA
GCTGCTCTGGCTGCCGATCGTGGGATGGAAGGCGATCGTGGCGAGAGACA
TATTTGTGCACAGGCAGACTATCGCTACATTTCGGCGCTTGGTGAAGACG
ACGACCGGGTCGCTCAAGGCGGGAAACTCTATCGTCACCTTCCCAGAGGG
AACCCGGAGTCAAGACGGACGCCTGGGAGAGTTCAAGCGCGGACCTTTTA
CGATGGCGCAGAAGGCGGGGGTGCGCATCGTGCCCGTGACCATCACCGGA
GTGATGAAAGCGATGCCGCCGTTTGCCCTGGCGCCGCTCGCCAAGCCACG
AGACGTGAGGCTCGTGATCCATAAGCCAATTGCCACCGAAGGACGACCGA
TGAAGGACTTAATCGCGGAGGCAAGAAGAGCAGTGGGCGACGCATTGGAA
GACTGGCAGAAGCCGCTCGAGGCAATCCCGCCTTCGCAGTCGCCAAGCTA
G
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