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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 351 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 351 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870412.132419-CDS-A-nodosum_M_contig9308:10458..10562 | 1680870412.132419-CDS-A-nodosum_M_contig9308:10458..10562 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig9308 10459..10562 + |
| 1680870412.143298-CDS-A-nodosum_M_contig9308:11328..11421 | 1680870412.143298-CDS-A-nodosum_M_contig9308:11328..11421 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig9308 11329..11421 + |
| 1680870412.155227-CDS-A-nodosum_M_contig9308:19802..19956 | 1680870412.155227-CDS-A-nodosum_M_contig9308:19802..19956 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig9308 19803..19956 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9308.1.1 >prot_A-nodosum_M_contig9308.1.1 ID=prot_A-nodosum_M_contig9308.1.1|Name=mRNA_A-nodosum_M_contig9308.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=117bp
VRLPSASNKRKGSPCASEKRPSQPYSKETSTIYYANTQCVTTAAVSVSDL
LPFLHRWAGRGFWDKMTAMSTAKILLYTKTPIATPKTTISTPESIMPTSL
YLQPRGFRDIRLPCFL* back to topmRNA from alignment at A-nodosum_M_contig9308:10459..19956+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig9308.1.1 ID=mRNA_A-nodosum_M_contig9308.1.1|Name=mRNA_A-nodosum_M_contig9308.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9498bp|location=Sequence derived from alignment at A-nodosum_M_contig9308:10459..19956+ (Ascophyllum nodosum dioecious)
GTACGGCTTCCGTCAGCAAGCAATAAAAGAAAAGGTTCACCGTGTGCTTC
CGAGAAACGCCCTTCACAGCCTTACAGCAAGGAGACATCAACGATCTACT
ACGCGTGAGTGTTCCTGTGCAGATCAATCGAGTCATTATAAAACTGGCGT
CGGACTTGTTCTCCTCGCTCACAATAGCTGACAGAATGGTATTTTCGAAC
CTCCGGAACAACCCTTAGAGCGATGTGTCTACCGTCCCCTCTTCGCTTGC
TATGTCTTCCGAGCCCAACGTTCTCCCTGCCTCGGCAGCTCCCGGTTCCG
CTGCTAGTATTACTTCAGCCGTTCCCGGACCGACCCCAACTGTAGCTCAA
AGCACACCGCGAGACAGCGTCGGGCCCTTACTGGCCCTCCTAATAACGTT
TGATAATCGCAGCCTCCTTAAGTCAGAGATATACAACATCTTGCGAACCC
ATACAAAATCACTGTGATTTAAGACAGCTTAGAACTGGGTGCTTTTCAAG
GACTCTGTTACTCCTGTATTTGTAGACTCTCTTTTCGGATGCCGATGCTT
TACGTTTGGCTTCGGCTAATAGCCCAACTACTCCTGTTACTCCCGAATCG
TTGGACGGTGTCTCTCCATTGTCGAGATGGCTCTACGCTACCAGCGCATG
AGAATGCTTGCGTCTATTTCGTTTTTCCCGCGTCTTTTTTCCGCCCGTTC
AAGGTTTATACTAATTTTACAGAAGAGGCTTCTACTTTTATACTGTTAAT
AATAGTAGTTCTGTACCAATAAACCATGGCCTCGCTGCGACACTAGCCTA
TGTAAACCGAGAGCTGACCAATACTCTCGTCTCCCTTGTGTCGCCGCGAG
GACCCTACCGGCGGGAGGAGGAACACGCAATGCGTTACTACAGCGGCGGT
CTCGGTCAGCGATTTGTTGCCATTCCTTCACCGCTGGGCTGGACGTGGCT
TCTGGGATAAAATGCAAGTACGTCTCTATCTCGCCTCCGAAATCCGAACC
CCCCCGCCCCGAAGCGCTCGCCATTGCGACCCCCTGCGACTTAGAATTTT
CGCGCCCCGGAATGTGCGTTCGTTCCAGCCTTGAAAAGACTTTTGCTCTC
AACATCTGATGATGTACATCTCTTAACGACGATGTTTAATAGTACAACCC
CCGCGCGGACTTTGTTGCAAAAATACAACACGCGCTGTGAAAGTGCAAAC
GTTGCAGTTCCCTCCAACACTGATAGGACTACAGCTATACAGCTGGTAAT
ACACTCAATGCGTCACGCATCCTCTGATTCTATTTTCACGTCGCCAATTC
CAATGGTAGCGTGACCATGGCCTGACCCGCTTGGGTCTCCGGATGGCCCA
TTAACGCAAGAAATTACACTTGAAATGGTACAGATTCGTACCGCACAGCG
AAACTCAACGCTGATGCCAACTCTGCCCCCCGGGTGATTTAGCGACTAGG
GATAAACCCTACAACTCGCTTACCGCGATGTGGACCACATTTGAAAAATT
ACAGCACTAAACCTCGCCCACAAGAGGCGGTACCCGAGCTCTCATACTCC
CTCGACTATAATCAGTCCACTTCCTCCAATCGCTCCGTCGTAGCGTAAAA
ACAGTTAGCGATCACGGATAGACCTTATGACTCGCTTCCCGCGATGTGAA
CCACATTTGCAAGTTTACAGTACTAAGCCTCGCCCACAGGCGTCGCCCGA
GCTATCATGCTCCCTCGACTATAACCAGTCCACTTGCTCCAATCGCTCCG
CTGTAGCGTAAAAACTGTTAGCGATCAGGGATAGACCCTACGACTCGCTT
ACCGAAATGCGAACCATGTTTGCACATTTACAGCACTTAACCTCGCCCAC
AATAAGGCGGCGCTCGAGCTCTCATGCTCTCTTGACTGTCACCACTCAGG
CTACCTCACTCGCTCCACTGCAGTATAACAGTGTTTAGTAACTAGGGAAA
AACCCTACGACTAGCTTGCAGCAATATGGACTGCGTTTGAAAAATTACAG
TACTTATACCTAGCCTACTATAGATGGCGGCGCTATTAGCAGTCGCTGCT
GTATTTGTGGCCCGACCGGACACAGCCTCCGGCGGTGCCTTGCCCCCTTA
AAGGTAATAGTTCCGGACTAACGCACGCTACGTCGCCGCAGTCCCAACTC
ACCCCCCTGCACCCTCGAGTGCCCTGCCGAGGCCCTCCTCCGCACCTTCA
AGGTAATAGTTCCGGACTCACGCACGCTACGTGGTCGCAGTCCCGAATCA
CCCCTCTGCGCCCTCGAGTGCCCAGCCGAGGCCCTCCTCCGCACTTTCAA
GGTAATAGTTCTGGACTCACACACGCTACAAACGTCGCCGCAGTCCCGAC
CCAACCTCCTGCGCCCTCGAGCGCCTCTGGCCCTGGCTCAGCCTTCACGG
CTGCTCCTACCATGCGTTATGGCTCTGCGTTTTCGGGTAACACCAACCCA
AACGCCCGCCGACCAGGTACGTTCCAGCTGCCACCTGCTCCTACCCCGTG
ACGGTTCGACGACAGTGCCACATCGGTATCCCTGTCTACGGCAGTATCCC
ACGGATGCCCCACTCCTCCTCCAGTTAACACCAACACACAGGTATCTTAT
ACTGGACGACATTGCGACCGTGCCACCCCCTTCTCACCCCTGAGCTTGCC
GCCTCGGACGGAAATGACCCACCAACCGGGACGTCAATTCAGAGGTGTGG
AGACACTGGTACAAGCGACACGGACATACGGTTGCTCTGTCCCTCTCGCG
ATCGCCCCCCCCACGGACATGCTACCACGAGCGTGGGTTCCTCTGGGTTC
AGTGCAGGCTTGGTCAGCTTGCCTGATATTCATGAACTCCCTCTCGATGA
CAGCAGTGGTGATGCAGACTCCAAAGTAGACGCACACCCTCCGTACCCAA
TCCATATTGGTGTGTGCCCCCAATCTCGTCAAACACCGGACCTTGGGACT
CCGGCCTCGCAGCTGCCAGCCGTTGGTCACACACGAGATCGTGCCGCGAC
TGGACCTGCCGCGGTGATTCCGCACCATTTTCTGGACGCAGAGAATGCCT
TCCTAAACAGGGAAGAAGACCCTCCCCATTCATCTTGGGCCAGCTGCTCA
GAGCCCCCAGCACCAATGCATAATACCAATGCAACAGCTGACTTGAGCAC
CTGCTACGGTACTTCCGCGACATTGGGCCAGCACAAAGCCTGCCCAGATC
GCGATGATTCTGAACGGACGCGGCCTGTCACAACCCCCTCCGTTCCTCCT
TCGCATGACTGCGCCCTCTTTCGTCCCGCTTGAACACTCCTACGCCACCT
ATGACGCATCGCTTACATACATCAATGACGATGTCGTCCTTTTCTGGCAT
TCACCTTCGGTTTTCTCACAATAAACGCTATCACCGCTCACTGTGGATCT
TGTCGAACACAATTGCGCTGAACAGTTCATGATGGCCTCGAAAGCCCGCC
TATTTGGCGATGATACGGCGCTCTCAGCCATTCTTGCTTCAAATGACCCC
CTAGAGCAAAAAATGCCTCGGCCGTCAAGTGCGTCACTTTGACCACGAGC
TATGGCAATCCGCATGCGAAAGCATTGTACTACATGGCAACCCTGCAAAA
TTTTCTCAAAACGAGGAGATGCACCTTGCCCTTATTCAAACCGGCAACCG
CCGCCCCACCGAAGCAAGACCAACGCAACGGCTGACTTGAGCGCTTGTAA
CGGTACTTCCGCGATACTTGGCCAGCACAAAGCCCGCCCGGATCGCGATG
ACTCTGAACGGACGCGGTCTGTCACAACCCCTCCGTTCCTCTCTCGCATG
ACGCTGAGAATGCCTTTCTTACAGGAAAGAAGACCCCCCATTCATCATGG
GCAAGCAGCTCAGAGACCCCAGTATGGATGCATAATACCAATTCCACTGC
TTACGTGAGCCCTTATAACGGTATTTCCGCGATTCTCGGCCAGCACAAAG
CCTGTGCCCAGATCGCGATGATAATGAACGGACGCGGCCTGTCACTACCC
CCTCCGTTCGGACTTCGCAGCCTATATACCCACACTTCGTACCACTTGAC
ATGGCACACGGCGCCTGTGATGCACCGCTCACATAAATTAGCGACGATGT
CGTCTTATTCTGGCTGCCCCCTTCGCCTTTTTCCCAATGAACCTAGTCGA
ATACGATTGTGCAGAACAGTTCCTCGAATGCTTACCTATTTGGCGACGAC
TTGACGCTTTCGGCAATACTTGCTACTGCCGATCCCCGAGAGCAAAAACG
CCTCGACCGTCATGTACGCCACTTCGATCACGATTTCTGGCAGCAAGAAT
GCGAAAATTCAGCCCTCCGAGGCAACCTGGCAAAATTATCTCACGAGAAA
ATGCGCCCGGCCCTCGTGCACACTGTGCCCACGCCGCCTCGCCGAAGCGA
GCCCCCATGACAAATTGTGGGGCATCGGCCTGACCGCGTGCGACCCCGAG
AGCACAAACGCCTCGACAGTCATGTGCGCCACTTTGGCCACGACCTCTTG
AAAAAAAGATTGCGAACATATCGCCCCGCGAGGCAACATTGCGACATTCT
CACAAAAAGATGCGATACGCCTTGCCCTTGGACATATTGGCGAACACCGC
CTCGCCGAAGCTTGCCACATGATAAATTGTGGTGTGCCGGCCTGGGCGCT
TGCAACCGTACGGTAAAAACCTGCTGGGTCAGGCCTTATAGACCGCCCGC
GAAATTCTTCGCCGAGATTCTATTACACCGCCCGACGACCCCGCACCGGA
AACCCCGGTTCCTCGAAATGTCACCGGCGATACGGTCTTCGATGTAGATC
CGATTACTCACCTTCGCCTCGATACGACCCCCCTTCCTGCCAATGCCCAA
ACGGCCGTGCTCTCGGCTTTCACCGACTCGGTGCCCGATGACCATGCCCC
TGAGGTACTCTTGGCTCACGAACAGCGCGATGACACGCCCCTCATGCCTG
CACAAGGCCCTGATATGATCGGTGGCATCGTCACCATGGACGACCACGTT
CACCACCTTATTAACACTCCATAGTGGAGTTTTCGCGACTTCTCGCTTTG
ACTGCCGCGCCATCTTGGACTCCTACCTCGCCGCTGGCCTCATCCAGCAC
TCCGTCACCGTAGTCGAGCCCCCTCGTATGTGTTCAGAAGAAATCGGGCG
GCATCCGAACCACAGTCAACTACCAAAAACTGAATAAGTTCACCGAGATC
CCTCAGATTGCGATCCCCCTCGTCGACGAAGTGCTTGACACCCTCGGCGG
TGGCTCGGTTTCTCAGTGTTCGACCTTCTCTCGGAGTTTACTCAGTTAAC
AATCCATCCGGATACTATCCCCCTGACTGCCTTTTGCACCCCCAACGGAC
TTTATGAATGGCCCCGCATGCCTCCAGGCGCAGCCGGCACTCCTGCTTGG
TTCGTCTCGGTCTTGGGACTCGTCACGGCCGGTCTCGATAACATTCTCAT
GTATCTTGACGACGCAATCGGCCCGGACGATTGTCCCCTCCATCATGTAG
CACCACTCGCTACCTTCTTCGCGCGACTACGCCTCCATAAACTCAAGCTC
TCCCCTGATAAATCCCGGATTAGTGCCGCACGTGTTGACTTTTCGGGTCA
CGTCATCTTGGCAGATGGCGTTCGCCCCAATGACGCTCGCGTCGCCGCCC
TCGCCCGCATGCCTATGCCCACGGATATCAAACAGCTTCGCAGCCTACTT
GGCGGTCTTAGTTATTACCGCAAGTTCCTGCCTAACATGGCTTACCACAT
ACGCCCGGTGATGGCCCTCCTGGAGAAGAACGCCGCGTTCTAATTCGCCT
CCGCAATGGAGGATACAGTTCGCACTCTTCTCGCGGAACTCGCCGCACCC
CCTATACTTGTCTTTCCGGACTGGGATGCGGTCATCGACATGTCTCGACC
CTTGCGCCTCCGCCCTGACGGATCCAGACAATCTTGGCGTTTATCTCATC
CGCGCGTGCGGACTCACCACCCCTTCCTGCCCCGCCCCTGGCGTGAGCTT
GGGTGGGCTGGTCCCCTCGCCGGATATCCCATTCTTGGGTGGGCTAGCTC
CCTCACCGTATATTCCGGTCTTGGGTGGGCTACCCCTGACATCAGACGAC
TTCCGGACACACCGTGCCCCGCTACCGTCTCCCTCTGCGACTACTTGCCC
TCGTTGCCCTCGCGCGACCTTTCCCCAGGCGCCCTACACAACCTACGCCA
TTAACGCCCGCGACGATGCCCCACGACCCACACGACGGACACGAAGCCAA
ACCGCGATCTTAGCTGGTAATACCCCATCGCGCTCGGACTATCGCACGGC
CGCCCACAGTGGGTTCGCCGCGTCCGCCGCTGCAGCGTCTCCTCCGCTCC
GCACGTCGCCGCCTCCGCGCTCGGCCCGCCTAGGCTCCACGACCTCCCCG
GGTCGTCGCGCCCCGATTAGCTTAACAAGCACAAACGTGAAGACCCCCTC
TGCGACGCCACTCGCCGATACATTCAGCTCGGATGCCCCAACATCACCTG
ACCTCACCATGCGACCTCATCCCCTCGCATCGACGTCCCGCCTCCACTGA
CATACTTGATCTCGCCGCCAAAGGCCGCGTGATCCAGGGTGACTACAGTA
CTACATTATTCGTCCGAAACCCCGTCACAGTAGCTTCCAGCCCAGTTGAC
ACCCCTGCCCGCCTCGGCCGGCTTCCCTTCAATGATCCCGTTCGCATCTA
TGTGCCACTTTTGGCCAGACCTTGGATCATGCACGCATGCCACGCCGATG
CCTTCTGTCATCTCGGTGTTATGCGCACCCTCAAAATGCTTGAACTTTTT
TACTGATGGTTCGGCATGGAAGTCTGCACGAAATAGTGGGTCCCCCGCTG
CCTCATCAGGCGCGTAAGACCTCCCGCCAGACAGTTCGTTGGCCGTCCTC
CCCATCCCCCTGCCCAACAGCCCTGGCGTTGCCGTCAGTGTTGACTATTT
TGGGCCCTCGCCTATAACGGCTCGAAGAAATTCCTACATCCTCCTTTTCA
CGGACCGCTTTAGCCGTCGCGCAGACATGTGCTGTTACCACGGCCGAATT
CATAGCCGAAGGCACCGCAAACAATGAACCCCAATTCTGCGCTCGATTAG
CGACCGCCGTCTACAAACTGCTCGGGATACAGCTCACATTGAGCGCCTAT
CACCCCAGTGGAAATGGAGGCGTAGAACATGTCAACCACACTATGGCTTA
AATGCTAGCCATGGTATGTAACGAACACCAAAACGACTGGGACGTCCATC
TTCCCCATGTCGAATACGCCTATAACAACTCTGTTAGCGCCGCCACGGGC
CTCGCCCCCAATGAAGTCCATATTGGACGCCTGCCGCGCTCCCTCTCACC
GTCTTTGATCGATCATATGGTGGTATACATCAGAACCTCGATCGCGACCA
ACTCGCCTACTGCGACCTTGCTCGTGAGCCCCAACAACGTGCGTACGAAC
TTGTACGAGAACAACACGCCCTCACCGTCGCTCGGGTAAATGGGCGCAAC
TCCGCCCTCTCCGATGCCCTCCTCCGCCGCCCCCAATATGCGGCCGGCGG
ATGGGTTTGGAtTTTTAACACCGCCGCCACTATCCGCCAAGGGTTGCGGA
AAGGCGCCGACAACAAAGTTCTCGAAGAGAAACTCTCGCTGAACTTTACT
GGACCCTTCAAGATCATCGCTGTTGGTCCCGCCCCAGCCGCCGACACTCC
CGACGGCCGCCCCCTTGGAGACAAGCTTATACCTTGACCTCCCTTCAAAT
CTTTCGGGCCTGCAGCCCAACCTCGCGTCACTGTGGCACGCTGCAAGCCC
TGCGCCAACCCATACGATGCCGCCGCACACCGCTGCCGCGGTTACCTTCA
CTGCCGCCCCTGTGGCGCAACCGCCGCCGCCGTGCCCCTGCACCGCCTCG
GCCGGGACACTCGGCCCACGCGCCACTAACCACAGCGACCTCTGTCGCAC
CCCGTACACTGCCGCAGCACACTGCTACCGCGGTTACCTTCCCTGCCGCC
CCTGTGGCCGCAACCGCCGCCGCCGTGCCCCCTGCACCGCCCCGGCCGGA
ACACTCGGCCCACGCGCCACTAACCACAGCGACCTCTGTCGCACCCCGTA
CACTGCCGCAGCACACTGCTACCGCGGTTACCTTCGCTGCCGCCCCAGTG
GCCGCTTCCACTGCCGCCCCTGTGGCCGCCTCCGCCGCCGCCGTGCTCCC
TGCACCGCTCCGGCAGCAAAACCCGGCCCTCGCGCCATGTACCTGCTACG
GCAGCGACTCGGCCCTCGCGCCATGTTCCTCGGCGGCTTTCATCGCCCCC
ACTGCGCCGCTACGGCAGCAGAACTCGGCCCTCGCGCCATGTACCTCGGC
GGCTTTCATCGCCCCCACTGTGCCGCTACGGCAGCAAAACCCGGCCCTCG
CGCCATGTACCTGCTACGGCAGCGACTCGGCCCTCGCGCCATGTACCTCG
GCGGCTTTCATCGCCCCCACTGCGCCGCTACGGCAGCAGAACTCGGCCCT
CGCGCCATGTACCTCGGCGGCTTTCATCGCCCCCACTGTGCCGCTACGGC
AGCAAAACCCGGCCCTCGCGCCATGTACCTGCTACGGCAGCGACTCGGCC
CTCGCGCCATGTACCTCGGCGGCTTTCATCTCCCCCACTGCGCCGCTACG
GCAGCAGAACTCGGCCCTCGCGCCATGTACCTCGGCGGCTTTCATCGCCC
TCACTGCGCCGCTACGGCAGCAAAACCCGGCCCTCGCGCCATGTACCTGC
TACGGCAGCGACTCGGCCCTCGCGCCATGTACCTCGGCGGCTTTTATCGC
TCCCACTGCGCCACTACGGCAGCAGAACTTGGCCCTCGCGCCATGTACCT
CGGCGGTTTTCACCGCCCCCACTGCGTCGCAGCGGCGGCAAACGCCAGCC
CCTGCCACGGCCAATCCCGCGACTTTTGTCGCCCATGCTGCACTGCAGCC
CCTGGCTCCGGTCACCTCGGCGGTTTTCACCGCCCCCACTGCGTCGCAGC
GGCGGCAAACGCCAGCCCCTGCCACGGCCAATCTCGCGACTTGTATCGCC
CATGCTGCACTGCAGCCCCCGGCTCCGGCCACCTCGCGTTTCCACGCCCC
CTGCGGCTCTTGGTGCCTCCAAACCCACGGTCGCCCTAACCCCCTCCAAG
GCGTCTTACACGGCTAACCTCTCCCTCCCTTGCCCTCTCTCCCTCTGCGC
TCCTTCGCCTTCTCAGGTTTACCATGTCTACACCGAGGACCCCCAGGTTC
GTCCTCTCATGCCTAACCTCCCCCTGTCATCCCTCCTCTCGCCTGCGTAC
TCAGGATCCCCTGTACCCCTCCCCCTTTTTTATTGCCTCCTCAGGACCGC
TATGTCTACGGCTAAGATTCTATTGTACACCAAGACGCCTATAGCTACGC
CCAAGACCACTATATCTACACCGGAGTCCATTATGCCTACCAGTTTATAT
CTACAGCCGCGAGGCTTTCGGGACATTCGACTTCCGTGTTTTTTATAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig9308:10459..19956+ >mRNA_A-nodosum_M_contig9308.1.1 ID=mRNA_A-nodosum_M_contig9308.1.1|Name=mRNA_A-nodosum_M_contig9308.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=351bp|location=Sequence derived from alignment at A-nodosum_M_contig9308:10459..19956+ (Ascophyllum nodosum dioecious)
GTACGGCTTCCGTCAGCAAGCAATAAAAGAAAAGGTTCACCGTGTGCTTC
CGAGAAACGCCCTTCACAGCCTTACAGCAAGGAGACATCAACGATCTACT
ACGCGAACACGCAATGCGTTACTACAGCGGCGGTCTCGGTCAGCGATTTG
TTGCCATTCCTTCACCGCTGGGCTGGACGTGGCTTCTGGGATAAAATGAC
CGCTATGTCTACGGCTAAGATTCTATTGTACACCAAGACGCCTATAGCTA
CGCCCAAGACCACTATATCTACACCGGAGTCCATTATGCCTACCAGTTTA
TATCTACAGCCGCGAGGCTTTCGGGACATTCGACTTCCGTGTTTTTTATA
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