mRNA_A-nodosum_M_contig93.78.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE) HSP 1 Score: 670 bits (1729), Expect = 1.300e-228 Identity = 328/447 (73.38%), Postives = 370/447 (82.77%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGAAPDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFNALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLPMVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSRFEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGRKLTSEWPEGAKPMWAVAKNHTPLTEDEVQAPLVSTG-------------GDGVRLKWNADNTTIEPSLVKLKETGPIPQDRRYLYVDCLKEATAAVGLGVEIVPPDA 1466
IDGEY+SRIVFQSLT DT TF W+L+EFKAARGAAPDMFLQDADAAM AAD+VFPDA+KRRCMWHLG+NL+ NL+ +LG F A LDQFYKT GRLT++GFE EYAKL+ETFPK++ YM LY DR+RWAVYSSVL FS AS+TTNRVESMNA+AKR +S ASLVRVF FLS +EK RA LR AQLRLP V+ PDT +WFGA +TTP KF LGVW YKFMMDEVA+CA FCSSPSNA+LEG +R +AL +FEYIGMMVV+VETVA+IVENH+GTDK+Y+VLGM DG HLCSC TLQELGLCCRHFWAAMRLSR+ KFHVGILNQHWLA+QGRK TSEWPEGAKP WAVA NH L+E E QAPLV+TG G G ++W+A N TIE SLV+LKETGP PQDRR+LYVDCLKEATAAV LGVE VPP+A
Sbjct: 362 IDGEYFSRIVFQSLTVDTTAVTFEWVLEEFKAARGAAPDMFLQDADAAMGLAADKVFPDARKRRCMWHLGQNLMKNLKKVLGSAFQAFLDQFYKTRGRLTESGFEEEYAKLVETFPKAKEYMAYLYKDRERWAVYSSVLVFSAASYTTNRVESMNAQAKRVLNSQASLVRVFKFLSDAIEKQAARAELRSAQLRLPSVSTPDTATYWFGAALTTPCKFALGVWAYKFMMDEVAMCATFCSSPSNALLEGASRDDALGKFEYIGMMVVNVETVAVIVENHDGTDKRYIVLGMTDGSHLCSCRTLQELGLCCRHFWAAMRLSRRYKFHVGILNQHWLAEQGRKPTSEWPEGAKPTWAVALNHKALSEGEKQAPLVATGRLQCATEGDEGGGGAGAGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEA 808
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5JBU5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU5_9PHAE) HSP 1 Score: 362 bits (930), Expect = 7.340e-114 Identity = 191/419 (45.58%), Postives = 254/419 (60.62%), Query Frame = 3
Query: 210 ADTKTGTFVWMLDEFKAARGA-APDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFNALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLPMVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSRFEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGRKLTSEWPEGAKPMWAVAKNHTPLTEDEVQAPLVSTGGDGVRLKWNA--DNTTIEPSLVKLKETGPIPQDRRYLYVDCLKEATAAVGLGVEIVP 1457
+DT+ TF WM++ + RG PD+F+Q+AD A T AAD+VF AKK RC+WHL KN+ L +LG F A + F K GRL++ GFE + +L F K+ Y+ LY DR RWA SVL FSV+SFT++RVE +N K+ + SL VF F G +EK DRA LR A+L LP V WFG ++FGLG+WP+++M E+ A+FC AVLEG R EA S+ E++G ++V VETVA ++E+ G +Y+V M+DG H+CSC TLQELGLCCRHFW AMRLS K KFHVGILN+HWL +QG + WP K W VA ++ ++D+ P + GD W A +N TIE L ++ +TG QDRR L+V+ LK+ T G P
Sbjct: 93 SDTQAETFEWMMEAWMETRGGEGPDVFIQEADGACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTNDFQKMGGRLSETGFEESFEELCINFAKAENYLRHLYKDRHRWAAAFSVLTFSVSSFTSSRVEGINRVMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRTARLALPAVAMAGVDDVWFGDKFMALIRFGLGMWPFRYMTMEMEAAAIFCGG-GGAVLEGDERFEAPSKLEFLGELIVGVETVAAVMESRYGRVMRYIVCSMQDGSHICSCRTLQELGLCCRHFWQAMRLSPKFKFHVGILNRHWLTEQGLRELEAWPPECK-QWMVALVNSDASKDDQVRPPTAMVGD----TWQAIPENATIETRLQRVAQTGQSSQDRRLLFVEMLKKTTCRELWGAACSP 505
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: D8LU83_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU83_ECTSI) HSP 1 Score: 310 bits (793), Expect = 6.500e-92 Identity = 177/425 (41.65%), Postives = 236/425 (55.53%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGAAPDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFNALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLP--MVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSR-FEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGRKLTSE-WPEGAKPMWAVAKNHTPLTEDEVQAPLVSTGGDGVRLKWNA---DNTTIEPSLVKLKETGPIPQDRRYLYVDCLKE 1418
+D EY +RIV QS+TADT T TF+WML +RG PD F+QDADAAMT A VFPDA RR +WHL +N++ L +LGG+ +D+F +L+ FE ++ L+E +PK+ YM +Y DR RWA Y S L FSV S+TT+RVE NA + +S +SL+ V + SG + +D A LRDA LP + AP TAF V +F + WP +FM E+ FC V +GP RA A R FEYI + D V I E + Y+VL DG HLC C TLQ L L CRH WAAM S + +FHVG+L++HWL ++ R + WP+ A+P W V+ H D G G +W + + T++ L+ LKE GP QDR+ LY D K+
Sbjct: 222 VDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGKQPDTFIQDADAAMTAAVREVFPDALARRNLWHLNQNVIKALAKVLGGYMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMQVVYDDRARWAEYVSPLVFSVGSWTTSRVEGQNALIRDRCNSRSSLLDVAKYFSGIICSQKDAAMLRDAIDHLPPNRMAAPPATAF---KSVLESCEFSIAGWPRRFMEQEMTAAITFCQMGGGEV-DGPERAAASGRTFEYIEDKLCDAIYVFGIHEQRDDKAFDYLVLLFSDGSHLCQCRTLQTLRLFCRHVWAAMMYSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRHAAREVDGAAGEGEGEGVGGCSGRWKSFVGSSQTVQTVLLDLKEKGPTDQDRQVLYADVTKK 642
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5K3E8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E8_9PHAE) HSP 1 Score: 276 bits (706), Expect = 6.570e-81 Identity = 157/365 (43.01%), Postives = 204/365 (55.89%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGAA-PDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFNALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLP--MVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSR-FEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGRKLTSE-WPEGAKPMWAVAKNH 1244
ID EY +RIV QS+TADT T TF+WML +RG PD+F+QDADAAMT A VFPDA RRC+WHL +N++ L +LGG + C G E ++ L+E PK+ YM +Y DR RW Y S L FSV +TT+ VE NA K +S +SL+ V + SG + +D LRDA LP + AP TAF V +F + WP +FM E+ MFC +GP RA AL R FEYI + V V I E +G Y++L DG +LC C TLQ LGL CRH WAAM S + +FHVG+L++HWL ++ R + WP+ A+P W V+ H
Sbjct: 102 IDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGEMKTAFHGRVQVCASAAVIGKERKFNALIEKHPKAEKYMRVVYDDRARWVEYVSPLVFSVGLWTTSSVEGQNALIKDKCNSRSSLLDVATYFSGIIRSQKDAPMLRDAIDHLPPNRMVAPPATAF--KKSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEA-DGPERAAALGRTFEYIEGKLCGVIYVFRIHEQRDGKAFDYLILLFSDGSNLCQCRTLQTLGLFCRHVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRH 463
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE) HSP 1 Score: 281 bits (719), Expect = 1.220e-79 Identity = 177/435 (40.69%), Postives = 233/435 (53.56%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGAA-PDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFNALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLP--MVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSR-FEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGRKLTSE-WPEGAKPMWAVAKN--HTPLTEDEVQAPLVSTGGDGVRLKWNA---DNTTIEPSLVKLKETGPIPQDRRYLYVDCLKEATAAVGL 1439
ID EY +RIV Q +TADT T TF+ ML +RG PD+F+QDADAAMT A VFPDA RRC+W+L +N++ L +LGG +D+F +L+ FE ++ L+E +PK+ YM +Y DR RWA Y S L FSV S+T VE NA K +S +SL+ V + SG + +D A LRDA LP + AP TAF V +F + WP +FM E+ MFC V +GP RA AL R EYI + DV V I E +G Y+VL DG HLC C TLQ LGL CRH WAAM S + +FH HWL ++ R + WP+ A+P W V+ + H D G G +W + + T++ L+ LKE GP QDR+ LY D K+ A +
Sbjct: 322 IDSEYRTRIVGQIITADTTTDTFLSMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWYLNQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMRVVYDDRARWAEYVSPLVFSVGSWTX--VEGQNALIKDKCNSRSSLLDVAKYFSGIICSQKDAAMLRDAIDHLPPNRMVAPPATAF---KSVLESCEFSIASWPRRFMEQEMTAAIMFCQMGGGEV-DGPERAAALGRTLEYIEGKLCDVINVFGIHEQRDGKAFDYLVLLFSDGSHLCQCRTLQTLGLFCRHVWAAMMHSPRFRFH------HWLTEKARGTPQQDWPDVARPRWVVSXSNRHAAGEVDGAAGEGEGEGVGGCGGRWKSFVGSSQTVQTVLLDLKEKGPTYQDRKVLYADVTKKLGQAASI 744
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5LMZ3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMZ3_9PHAE) HSP 1 Score: 263 bits (673), Expect = 3.970e-72 Identity = 151/344 (43.90%), Postives = 200/344 (58.14%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGAA-PDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFNALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLP--MVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSR-FEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGR 1184
ID EY +RIV QS+TADT T TF+WML +RG PD+F+QDA AAMT A VFPDA RRC+WHL +N++ L +LGG +D+F +L+ FE ++ +E +PK+ YM +Y DR RWA Y + FS+ S+TT+R+E NA + +S +SL+ V + SGT+ +D A LRDA LP + AP TAF V +F + WP +FM E+ MFC V +GP RA A R FEYI + DV V I E +G Y+VL DG LC C TLQ LGL CRH AAM S + +FHVG+L++HWL ++ R
Sbjct: 599 IDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDAVAAMTAAVREVFPDALARRCLWHLKQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLTKFERKFNAFIEKYPKAEKYMRVVYDDRARWAEYVPPVVFSLGSWTTSRIEGQNALIRDKCNSRSSLLDVAKYFSGTIRSQKDAAMLRDAIDHLPPNRMAAPPATAF---KSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEV-DGPERAAASGRTFEYIEGKLCDVIYVFGIHEQRDGKAFDYLVLLFSDGSRLCQCRTLQTLGLFCRHVLAAMMHSPRFRFHVGLLHEHWLTEKAR 938
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5JFD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD7_9PHAE) HSP 1 Score: 242 bits (617), Expect = 6.730e-68 Identity = 156/437 (35.70%), Postives = 210/437 (48.05%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGAAPDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFN---------ALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLP--MVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSRFEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGRKLT-SEWPEGAKPMWAVAKNHTPLTEDEVQAPLVSTGGDGVRLKWNADNTTIEPSLVKLKETGPIPQDRRYLYVDCLKEATAAVGL 1439
ID EY +RIV QS+TADT T TFVW DAD AMT A VFPDA RRC+WHL +N++ L LGG A +D+F +L+ FE ++ L+ +P++ YM +Y DR RWA Y S L FSV S+TT+RVE NA K +S +SL+ + + SG + +D A LRDA LP + P TTA V +F + WP + M E+ M+C V +GP RA A R T Y+VL D HLC C TLQ LGL CR WAAM S + +FHVG+L++HWL ++ R +WP+ A+P W D GG G + T++ ++ LKE GP QDR+ +Y + K+ A +
Sbjct: 49 IDSEYRTRIVGQSITADTTTNTFVW------------------DADVAMTAAVSEVFPDALWRRCLWHLHQNIMKTLAKDLGGQMKVCSTVCVGMAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTSRVEGQNALIKDKCNSRSSLLDMAKYFSGIICSQKDAAALRDAIDHLPPARMATPPTTAL---KSVLESCEFSIAAWPRRLMEQEMTAAIMYCQMDGGEV-DGPERAAASRR-----------------------TTFDYLVLLFSDVSHLCQCRTLQTLGLFCRQVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPLHDWPDVARPRWEKWTGRRERERD---------GGGGX------SSQTVQTVVLDLKEKGPTDQDRQVVYANVTKKLGQAASI 425
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 244 bits (623), Expect = 1.560e-64 Identity = 160/453 (35.32%), Postives = 217/453 (47.90%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGA-APDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFNALLDQFYKTCGR-----------------LTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLPMVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSRFEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGRKLTSEWPEGAKPMWAVAKNHTPLTEDEVQAPLVSTGGDGVRLKWNA--DNTTIEPSLVKLKETGPIPQDRRYLYVDCLKEATAAVGLGVEIVPPD 1463
IDGEY++R+ FQ +++DT+ TF WM++ + RG PD+F+QDAD A T AA++VF AKK RC+W L KN+ L +LG F A Q R L K G L ET +S P + L V F + V+ K+ + SL VF F G +EK DRA LR A+L LP V P WFG P++FGLG+WP +FM E+ A+FC NAVLEG R EAL + E++G ++V VETVA+++E+ +G R+ R HWL +QG + WP KP W VA H+ ++D+ P GD W A ++ TIE L ++ +TG QDRR LYV+ LK+ATAAV GV++VPPD
Sbjct: 134 IDGEYFTRVAFQMISSDTQAETFEWMMESWMETRGGEGPDVFIQDADGACTLAANKVFKGAKKLRCLWRLWKNVKEKLGSILGKDFAASFRQRLPEDARPVVGDRHGGIVRGALRQLPKGG-----GLLAETVQRSSP-------------LGGGFLCADVQCFVVH-VQPSRRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPAVAMPGVDDVWFGQRFMAPIRFGLGMWPLRFMTIEMEAAAIFCVG-GNAVLEGGERLEALGKLEFLGELIVGVETVAVVMESRDG------------------------------------RVMR-----------HWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTVVVGD----TWQAIPEDATIETRLQRVAQTGQSCQDRRLLYVEMLKKATAAVSSGVQLVPPD 515
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE) HSP 1 Score: 229 bits (584), Expect = 2.350e-61 Identity = 162/478 (33.89%), Postives = 216/478 (45.19%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGAA-PDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFN----------------------------------------ALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLPMVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSR-FEYIGMMVVDVETVALIVENHN-GTDKQYVVLGMKDGGHLCSCCTLQELGLCCRHFWAAMRLSRKDKFHVGILNQHWLADQGRKLT-SEWPEGAKPMWAVAKNHTPLTEDEVQAPLVSTG----------------GDGVRLKWNADNTTIEPSLVKLKETGPIPQDRRYLYVDCLKE 1418
ID EY +RIV QS+TADT T TFVWML +RG PD+F+QDAD AMT A VFPDA RRC+WHL ++++ L LGG A +D+F +L+ FE ++ L+ +P++ YM +Y DR RWA Y S L FSV S+TT RVE V++ S + R RL TTAF V +F WP + M E+ MFC L+G RA AL R FEYI + DV V I E+ + G Y+VL DG HLC C T Q LGL CRH WAAM S + +FHVG+L+QHWL ++ R +WP+ A+P + V + T + + G + T++ +L+ LKE P Q+R+ LY D K+
Sbjct: 265 IDSEYRTRIVGQSITADTTTNTFVWMLKSALRSRGGKQPDIFIQDADVAMTAAVREVFPDALARRCLWHLYQHIMKALAKDLGGQMKVCSTVCVGMAGSSCAEALTQATPTSPASFRGRSACSCFAQAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTPRVE----------------VQLLCRESSAPRRMHPRGVTLSTTCRLLEWLLQPTTAF---KSVLESCEFSFAAWPRRLMEQEMTAAIMFCQMDGGE-LDGSERAAALGRTFEYIEDKLCDVIYVFGIREHRDDGRTFDYLVLLFSDGSHLCQCRTFQTLGLFCRHVWAAMMYSPRFRFHVGLLHQHWLTEKARGTPLQDWPDVARPRFVVISDRHASTAGAKERFEGAAGEXXXXXXXXXXXXXXXXXXXXXXXXXSSQTVQAALLDLKEKEPTDQERQVLYADVTKK 722
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Match: A0A6H5JZ86_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ86_9PHAE) HSP 1 Score: 205 bits (522), Expect = 7.420e-56 Identity = 129/309 (41.75%), Postives = 168/309 (54.37%), Query Frame = 3
Query: 165 IDGEYYSRIVFQSLTADTKTGTFVWMLDEFKAARGAA-PDMFLQDADAAMTQAADRVFPDAKKRRCMWHLGKNLLTNLRGLLGGHFNALLDQFYKTCGRLTKNGFEAEYAKLMETFPKSRPYMDTLYADRDRWAVYSSVLAFSVASFTTNRVESMNARAKRYFDSSASLVRVFNFLSGTLEKHRDRATLRDAQLRLP--MVTAPDTTAFWFGAPVTTPLKFGLGVWPYKFMMDEVALCAMFCSSPSNAVLEGPARAEALSR-FEYIGMMVVDVETVALIVENHNGTDKQYVVLGMKDGGHLCSCCTLQE 1079
ID EY +RIV QS+TADT T TF WML +RG PD+ +QDADAAMT A VFPDA RRC+WHL +N++ L +LGG +D+F +L+ FE ++ L+E +PK+ YM ++ DR RWA Y S L FSV NA + +S +SL+ V + S + +D A LRDA LP + AP TAF V +F + WP +FM E+ MFC V +GP RA AL R FEYI + DV V I E +G Y+VL DG HLC C T++E
Sbjct: 49 IDSEYRTRIVGQSITADTTTDTFQWMLKSALESRGGKQPDISIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGDMKPFVDEFRCVHQQLSLAKFERKFNALIEKYPKAEKYMRVVHDDRARWAEYVSPLVFSVGQ---------NALIRDKCNSRSSLLDVAKYFSVIICSQKDAAMLRDAIDHLPPNRMAAPPATAF---KSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEV-DGPERAAALGRTFEYIEGKLCDVINVFGIHEQRDGKAFDYLVLLFSDGSHLCQCRTMRE 344 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig93.78.1 >prot_A-nodosum_M_contig93.78.1 ID=prot_A-nodosum_M_contig93.78.1|Name=mRNA_A-nodosum_M_contig93.78.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=575bp MTRLSRINIVFPSALESSSTIDGEYYSRIVFQSLTADTKTGTFVWMLDEFback to top mRNA from alignment at A-nodosum_M_contig93:945223..949174+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig93.78.1 ID=mRNA_A-nodosum_M_contig93.78.1|Name=mRNA_A-nodosum_M_contig93.78.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3952bp|location=Sequence derived from alignment at A-nodosum_M_contig93:945223..949174+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig93:945223..949174+ >mRNA_A-nodosum_M_contig93.78.1 ID=mRNA_A-nodosum_M_contig93.78.1|Name=mRNA_A-nodosum_M_contig93.78.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1725bp|location=Sequence derived from alignment at A-nodosum_M_contig93:945223..949174+ (Ascophyllum nodosum dioecious)back to top |