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Homology
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: A0A6H5KD48_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD48_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 5.200e-151 Identity = 260/318 (81.76%), Postives = 279/318 (87.74%), Query Frame = 1
Query: 1 MNDRLSELTGAGAGSRGVAYAPFEVSIDANEAGNGGVTWGXXXXXXXXXXFMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCMLXXXXXXXXXXXIFLFVSGV 954
MNDRL ELTG VA PFE++ XXXXXXXXX FME FF+KVN+VKKDIDAVKKACTDLDTLTQQATLTSSAT EADAK QIN+ I +TNNRVAHAKGLLQ+MREETEAMK+DP+RAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKP+ATEEELT VFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTY DVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYV+DANTD+ HA+++SK IRKRQCCM+ XXXXXXXX + +FV G+
Sbjct: 1 MNDRLGELTGGXXXXXXVA--PFEIAXXXXXX-----XXXXXXXXXXXXGFMEGFFDKVNAVKKDIDAVKKACTDLDTLTQQATLTSSATVEADAKSQINTTIANTNNRVAHAKGLLQAMREETEAMKKDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPSATEEELTTVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYHDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVKDANTDIAHAIDSSKKIRKRQCCMIIIXXXXXXXXVLAVFVIGL 311
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: A0A836CD59_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD59_9STRA) HSP 1 Score: 276 bits (706), Expect = 1.440e-88 Identity = 160/300 (53.33%), Postives = 205/300 (68.33%), Query Frame = 1
Query: 1 MNDRLSELTGAGAGSRGVAYAPFEVSIDANEAGNGGVTWGXXXXXXXXXXFMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQ-GDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCML 897
MNDRL +L G+ + G V+ID E G M+ FFE + S+K DI+AVK AC LD+LT+ A AK +I V+ TN V+HAK LL +R ET A+KRDP R+ + +RVR NL+ T TRKFVD+AK+YQN+QN+YK+ VK KAER + AVKPT TE+E+ AVF+Q+DGV+RV+EAA++QQ GDPVEV +VL EV+D Y DVRRLEASILELH+MFMDLALLV++QGE LD IE+QVK A DYV+ N L+ A+ +K +RKRQCCM+
Sbjct: 1 MNDRLGDLR-RGSNADGEVELS-SVAIDVEEEAGG-------------KDDMKKFFESIESIKADINAVKAACKQLDSLTEAAIFAPMDKGGETAKDKITEVLAKTNKHVSHAKTLLHDLRTETAALKRDPKRSTNANIRVRANLETTFTRKFVDVAKEYQNKQNRYKSQVKGKAERAVKAVKPTVTEDEMAAVFQQDDGVKRVLEAAVMQQSGDPVEVANVLAEVQDQYEDVRRLEASILELHRMFMDLALLVEQQGETLDVIEFQVKQAGDYVRQGNVSLEDAIAKAKQVRKRQCCMI 285
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: A0A4D9D821_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D821_9STRA) HSP 1 Score: 216 bits (551), Expect = 4.850e-65 Identity = 133/315 (42.22%), Postives = 190/315 (60.32%), Query Frame = 1
Query: 1 MNDRLSELTGAGAGSRGVAYAPFEVSIDANEAGNGGVTWGXXXXXXXXXXFMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCMLXXXXXXXXXXXIFLFV 945
MNDRL+EL G G+ + + G G +M FF V + K+DI+A+K+A + + Q+A L ++ EA +++N+VI TN + A AK +L M++ET +++D +R PS++R+R+NL NTLTRKFVD+ KDYQN Q KYK +K K +RQ+ VKP A+ EE+ AVF+ G +V+ AIL+ G + +V + V D Y+DV LEASI ELH+MF+D ALLV++QGEMLDQIEYQVK A++YV++ +Q A+ +K RK QCCML + LFV
Sbjct: 1 MNDRLAELRAKGGGAPSDSVGVDMTRLQGRGDGAGAAP-SAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQD-SRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILK-GANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILILVLFV 312
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: A0A836CCH9_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH9_9STRA) HSP 1 Score: 214 bits (544), Expect = 3.110e-64 Identity = 131/296 (44.26%), Postives = 184/296 (62.16%), Query Frame = 1
Query: 1 MNDRLSELTGAGAGSRGVAYAPFEVSIDANEAGNGGVTWGXXXXXXXXXXFMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQC 888
MNDRL+EL G F+ + NG M F+E + ++ DI +++ AC +LD L A A AK+ +++++T TN +H+K LL ++R ET +KRD + +RVR NL+ + KFVD AK+Y+N+Q++Y+ VK+KAER I AVKP TEEE+TAVF EDGV RV++AA+LQ ++ VL EV+DTY+DVRRLEASI+ELH+MFMDLALLV++QGE LD IE QV A +Y++ + +L AV+T+KT+R RQC
Sbjct: 1 MNDRLAEL--------GSQVGTFQTNKSMMTVDNG-------------QHSMNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGID--DVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQC 273
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: A0A7S2K4X5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4X5_9STRA) HSP 1 Score: 197 bits (502), Expect = 6.690e-58 Identity = 122/300 (40.67%), Postives = 184/300 (61.33%), Query Frame = 1
Query: 1 MNDRLSELTGAGAGSRGVAYAPFEVSIDANEAGNGGVTWGXXXXXXXXXXFMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQ-GDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCML 897
MNDRL++LT GA + + +V++D EAG +ME FF+ V ++K DI AV+ A + + ++A L S E D ++ ++ STN + HAK LL+ ++++ E K K S++R+RENL NTLTRKFVD K+YQN Q KYK+ +KKK +RQ+ VKP AT EE+ AV + E G + + IL DP++ + V Y+DV LEAS+ ELH+MF D ALL ++QGE+L+QIE+QV++A+DY+++ N D+ ++E K+IRK+QC ++
Sbjct: 1 MNDRLADLTYGGANT-----SMDDVTVDQMEAGT-------TTDNGAGANYMEQFFKDVETIKADIQAVRDATKVIGQINEEAVLAISTDKERDLSNRLRPLVDSTNKKAKHAKALLELIKKQNEQEK-GKGNIKNSDMRIRENLNNTLTRKFVDEMKEYQNAQQKYKSDIKKKVKRQVQIVKPDATNEEIDAVMKSEGGRDALYKDKILTGVADPIKNAYA--NVAGKYQDVLALEASVTELHQMFQDFALLTEQQGELLNQIEFQVETAADYIEEGNVDIVKSIEYQKSIRKKQCWII 285
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: A0A067CCD7_SAPPC (t-SNARE coiled-coil homology domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CCD7_SAPPC) HSP 1 Score: 194 bits (493), Expect = 1.180e-56 Identity = 123/299 (41.14%), Postives = 180/299 (60.20%), Query Frame = 1
Query: 1 MNDRLSELTGAGAGSRGVAYAPFEVSIDANEAGNGGVTWGXXXXXXXXXXFMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCML 897
MNDRL+ELTG + +V ID +EA + FME FF V ++ D+ + A + L QA L ++A E +++ VI STN AHAKG+L+ +++E+ K+D T A SE+R+R+N+ TLTRKF+D K+YQ Q K+K +K K +RQ+ VKP A+E+E+ V D + +AILQ G + V D Y+DV +LE S+ ELH+MF+DLALLV++QGEMLDQIE+QVK+AS+Y+ N ++ A++T K++RK+QCC+L
Sbjct: 1 MNDRLAELTGKSS----------DVMIDISEASS--------TTEITRPKFMEKFFLDVEDMQADLSKIGHATDRIGELNHQALLATAAGEEQTISQELCLVIDSTNKIAAHAKGMLELIKKESAEKKKDKTVA-ASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRSADPG-AIYRSAILQ-GSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKAASNYIDAGNKEVTKAIQTQKSMRKKQCCLL 278
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: A0A7S2FD15_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FD15_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.290e-56 Identity = 109/249 (43.78%), Postives = 162/249 (65.06%), Query Frame = 1
Query: 151 FMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCML 897
FM+ FF V +VK + +K AC ++ + QQ L + T+E + ++++ +I TN K +L +M+EET+ + R+ +AK +E R+RENL NTLTRKF+++ K+YQ RQ YK VKKK RQ+ VK AT EE+ V + G + ++AIL+ + EV + D Y+DV RLE S+ ELH+MF+D ALL ++QGE+LDQIEYQV +AS+Y+ D N DL+ A + K+IRK+QCC++
Sbjct: 31 FMQKFFADVEAVKGHLKKIKSACKEIQNINQQMLL--ATTSETEISQKLSPIIDKTNKIAQRCKTILNTMKEETDTLARENDKAKANEQRIRENLVNTLTRKFMEVVKEYQKRQQDYKDDVKKKVTRQVKIVKEDATPEEIDQVMKSAGGTGAMFKSAILKSANN-EVVEAYSQAADQYQDVLRLEESMQELHQMFVDFALLTEQQGELLDQIEYQVHAASEYITDGNDDLEVAGDYQKSIRKKQCCVI 276
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: K0SR65_THAOC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SR65_THAOC) HSP 1 Score: 192 bits (488), Expect = 4.830e-55 Identity = 111/244 (45.49%), Postives = 157/244 (64.34%), Query Frame = 1
Query: 154 MEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQ 885
M+ FF V ++K DI AV A ++ L +A L +S T EA + I +++ TN R K LL ++EE +K++ +AKP+++RVRENL NTL RKF+D K YQN Q +YKT VKKK RQ+ +KP AT++E+ + E G + + + IL G ++ V Y+D+ LEAS+ ELH+MF+D ALL D+QGE+LDQIEYQV+ A+DYV+DAN D+ A+E SK IRK+Q
Sbjct: 76 MKQFFNDVEAIKSDISAVGDATEQINALKDKAVLATSETEEAQISEMIRTLVEGTNGRAKTCKNLLGLLKEENSNLKKEE-KAKPTDLRVRENLVNTLLRKFIDEMKRYQNAQQQYKTDVKKKVTRQVQIIKPDATDQEVDDIMRSEGGREALYQQQILSGGVNDQIKTQYRAVAGKYQDILTLEASVAELHQMFLDFALLTDQQGELLDQIEYQVREAADYVEDANVDVDGAIEYSKKIRKKQ 318
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: A0A7R9WLG1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WLG1_9STRA) HSP 1 Score: 190 bits (483), Expect = 5.640e-55 Identity = 108/248 (43.55%), Postives = 158/248 (63.71%), Query Frame = 1
Query: 154 MEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCML 897
ME FF V S+K DI+AV KA + + + A L ++ EA ++ ++ +TN R K LL ++E+ E +K++ K S++R+RENL NTLTRKF+D K YQ Q KYKT +K K +RQ+ VKP AT+EE+ V + E G + + + AIL G + + Y+DV LE S+ ELH+MF+D ALL ++QGE+LD IE+QVKSA+DY++DAN ++ A+E SK IRK+QC ++
Sbjct: 46 METFFRDVESIKADIEAVSKATKRIGEINEDAVLATTDAKEAQLSNELRPLVDATNKRAKRTKNLLALLKEDNEKLKKEGD-VKQSDMRIRENLCNTLTRKFIDEMKLYQLAQQKYKTDIKNKVKRQVQIVKPDATDEEIDMVMKSEGGREALYKGAILAGGVADSIKTAYSKAAGKYQDVLTLEQSVAELHQMFLDFALLTEQQGELLDHIEHQVKSAADYIEDANVEVHEAIEYSKKIRKKQCFII 292
BLAST of mRNA_A-nodosum_M_contig93.16.1 vs. uniprot
Match: F0YHT3_AURAN (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHT3_AURAN) HSP 1 Score: 187 bits (475), Expect = 1.760e-54 Identity = 109/250 (43.60%), Postives = 158/250 (63.20%), Query Frame = 1
Query: 151 FMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQINSVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQ-QGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCML 897
FM FF +V+ VK+ I+ +K A + +T + L S E +++ ++ TN RV K LLQ M +ET + K K SE R+RENL NTL RKF D+ KDYQ Q +YK+ ++K +RQ+ VKP T +E+ V + G V +AIL+ DP++ + +V D Y+DV +LE S+ ELH+MF+D ALL ++QGE+LDQIEYQVKSA +Y++D NTD+Q+A++ K IRKR CC++
Sbjct: 5 FMATFFGQVDDVKEGINGIKAATKRIHAITDERMLAVSNATEEQLSRELTPLVDKTNRRVKATKELLQRMSDETASAKGT---VKQSEFRIRENLANTLMRKFGDVCKDYQREQQRYKSEIQKTVKRQLEIVKPDVTPDEIDTVL-RNGGTSEVFRSAILKGAADPIKSAYA--DVADKYQDVLKLEQSVAELHQMFLDFALLTEQQGELLDQIEYQVKSAGEYIEDGNTDIQYAIQYQKEIRKRYCCLI 248
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G5P2 |
| Preferred name | SYP111 |
| PFAMs | SNARE,Syntaxin |
| Model size | 960 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002 |
| KEGG ko | ko:K02201,ko:K03321,ko:K04560,ko:K08486,ko:K14411 |
| KEGG TC | 2.A.53.3 |
| KEGG Reaction | R03035 |
| KEGG Pathway | ko00770,ko01100,ko03015,ko04130,ko04721,ko04911,ko05031,map00770,map01100,map03015,map04130,map04721,map04911,map05031 |
| KEGG Module | M00120 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000149,GO:0000902,GO:0000904,GO:0001101,GO:0001505,GO:0003006,GO:0003008,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005802,GO:0005886,GO:0005911,GO:0006605,GO:0006612,GO:0006810,GO:0006833,GO:0006836,GO:0006886,GO:0006887,GO:0006904,GO:0006906,GO:0006950,GO:0006952,GO:0006996,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007610,GO:0007611,GO:0007613,GO:0007614,GO:0008104,GO:0008150,GO:0009266,GO:0009409,GO:0009504,GO:0009506,GO:0009524,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010033,GO:0010119,GO:0010148,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0017156,GO:0022406,GO:0022414,GO:0023052,GO:0023061,GO:0030054,GO:0030133,GO:0030154,GO:0031201,GO:0031224,GO:0031347,GO:0031348,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032507,GO:0032940,GO:0032989,GO:0032991,GO:0033036,GO:0033993,GO:0034613,GO:0040007,GO:0042044,GO:0042221,GO:0042886,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043495,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045055,GO:0045184,GO:0045185,GO:0046903,GO:0046907,GO:0048278,GO:0048284,GO:0048468,GO:0048489,GO:0048519,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050789,GO:0050794,GO:0050832,GO:0050877,GO:0050890,GO:0050896,GO:0051179,GO:0051234,GO:0051235,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051704,GO:0051707,GO:0055044,GO:0060560,GO:0061024,GO:0061025,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072658,GO:0072659,GO:0072660,GO:0080134,GO:0090150,GO:0090174,GO:0097305,GO:0097479,GO:0097480,GO:0097708,GO:0098542,GO:0098791,GO:0098796,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140029,GO:0140056,GO:1901700,GO:1990778 |
| Exons | 7 |
| Evalue | 3.81e-148 |
| EggNOG OGs | COG5074@1|root,KOG0810@2759|Eukaryota |
| Ec32 ortholog description | Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) |
| Ec32 ortholog | Ec-12_008590.1 |
| EC | 2.7.7.3 |
| Description | SNAP receptor activity |
| Cds size | 960 |
| COG category | U |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko02000,ko03019,ko04131,ko04147 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870403.877081-CDS-A-nodosum_M_contig93:84709..84922 | 1680870403.877081-CDS-A-nodosum_M_contig93:84709..84922 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 84710..84922 + |
| 1680870403.8937573-CDS-A-nodosum_M_contig93:92653..92754 | 1680870403.8937573-CDS-A-nodosum_M_contig93:92653..92754 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 92654..92754 + |
| 1680870403.9048748-CDS-A-nodosum_M_contig93:93026..93204 | 1680870403.9048748-CDS-A-nodosum_M_contig93:93026..93204 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 93027..93204 + |
| 1680870403.918794-CDS-A-nodosum_M_contig93:93474..93576 | 1680870403.918794-CDS-A-nodosum_M_contig93:93474..93576 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 93475..93576 + |
| 1680870403.9300907-CDS-A-nodosum_M_contig93:93895..93962 | 1680870403.9300907-CDS-A-nodosum_M_contig93:93895..93962 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 93896..93962 + |
| 1680870403.940044-CDS-A-nodosum_M_contig93:94720..94857 | 1680870403.940044-CDS-A-nodosum_M_contig93:94720..94857 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 94721..94857 + |
| 1680870403.951795-CDS-A-nodosum_M_contig93:96783..96945 | 1680870403.951795-CDS-A-nodosum_M_contig93:96783..96945 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 96784..96945 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig93.16.1 >prot_A-nodosum_M_contig93.16.1 ID=prot_A-nodosum_M_contig93.16.1|Name=mRNA_A-nodosum_M_contig93.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=320bp
MNDRLSELTGAGAGSRGVAYAPFEVSIDANEAGNGGVTWGGGGGGAGGGG
FMEAFFEKVNSVKKDIDAVKKACTDLDTLTQQATLTSSATAEADAKKQIN
SVITSTNNRVAHAKGLLQSMREETEAMKRDPTRAKPSEVRVRENLQNTLT
RKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPTATEEELTAVFEQEDG
VQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASILELHKMFMDLA
LLVDRQGEMLDQIEYQVKSASDYVQDANTDLQHAVETSKTIRKRQCCMLV
IVLIIIAIIVIFLFVSGVI* back to topmRNA from alignment at A-nodosum_M_contig93:84710..96945+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig93.16.1 ID=mRNA_A-nodosum_M_contig93.16.1|Name=mRNA_A-nodosum_M_contig93.16.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12236bp|location=Sequence derived from alignment at A-nodosum_M_contig93:84710..96945+ (Ascophyllum nodosum dioecious)
ATGAATGATCGACTTAGCGAGCTCACTGGAGCCGGAGCAGGCTCAAGGGG
CGTGGCATATGCTCCCTTCGAGGTTTCGATCGACGCCAACGAAGCGGGCA
ACGGAGGAGTGACATGGGGTGGAGGCGGTGGAGGAGCTGGTGGCGGAGGT
TTTATGGAAGCTTTCTTTGAAAAGGTTAACTCCGTGAAGAAGGACATCGA
TGCTGTAAAAAAGGTGCGCCGACTTTTTAAACTTATGTTGATTTCCCATC
TGCTCTGGGAAGCAGTCCATTTGTTTGTTCTCCGTTGGAAGCGACTCTGT
CGCTCTATGGGTCTCGAAGAGTCTCGTGCCCTCGACATATTTCCCACCTT
TCCCGCCGTGGTGCAAGAACTTGTTCGTCAACGGGTTCAGACTATATATA
CAACTGACAAGTCTAGGAGTACAAACCACAGAAACTGTTATCATGGTGTA
GACTAGACTACTGCTGTACCCCGTATAGGTATAGAGCTAAATGTTCGATT
AAAATGTACCTGTAGAGCGAAATGTTTGATTAAAATGTACCTGTAGAGCT
ATTCTAAATGTTTGGTGAAAATTAAAACTCTGAAATCTCAAACCAACACA
GCAGTTGGTTGTGGGTACCTTCATTATCTGTGGCATCGGCGAATTGCAAA
TCTACATTGCATCAATTATAGCTCAAATTCTCGCGACCTTTCTTGAAGCA
TTTTTTGTACGAGAGTGGGTGTGTGTGTTTTCTTCCCATTCATTCTGGAC
ATCAAGTTCGTTGGACGTACGCGAGGTCACACAGGAGGAACGTCACACAG
GATTTTTCATCCACCTTCCTTCTGCGGTGCGTGCCTTAATTTTTCTCGCG
AGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATTTTG
TGTACTAACTATTTAATCGTTCTCCACCCGTTGGGCATTTATAGTTTTAG
TTTTTAGTTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCACG
TCCCAACGTGTCAGAAGGTTACAAGGTTACCTCTGAGCTACCGAGGCGAC
CGAGAGTAGATTATTTATGCAAGTGTACGAGCTGCTAATGGTTGTGCTAC
TGACCAACTCGTTCTATAGATACTGTACCTGGCTGTCTTAATTTTACCAA
GGACTTTTTGTCACCATACTCGTGTATCAAGAGCACCATGCACAAAAGCA
GCCGGATGTACTGACTGTGATATGAAGAGATATTTGGGTGAGGTTATTTT
CGCAGCAAACTGCAAACTTTTATGTACTTGTAGATAACCCGCAGAACCTG
TTGTGCCCGATGACGAGTTCTAATCTCAGCGAGTTGATCGTCTTCCTTGA
TTTGTGAATGCGCACTTCTGTACCTGCATCGCGATAAAGTCTAGTCCCCA
AACATTACCTACCATGTCTCGTGCAAAGTACTGTACAAGGTTACATCTTA
TAGGTAATCTAATCGGTACTGTAATGGTAAGGAGAGTTTAGCTTGCTTGG
TCCATTTCATCATTTTAATAGAACGAGCGCTTACCATCGGGTTACCCGTT
CAGATGCCATGGAGAGTTTTTGTCCTTACAGCCTAAGTTTCCACCTGAAT
GTTTTGAGAATTTTTCCCCCTGATTATTGGGAAAAGCTCAAAAGGTTTAG
ATGCGTTCAGATTTTTCTTAAAAGCGAGGAAGGATAGCATGGAGAGAGAA
CGCATCTAAACCTTCTGAGCATCCCCCAGTCAGGGGGAAGAATGTTAAAA
CGTTTAGGTGGGATCATAGGCTGCATGAGACAAAACCTCTTGATGACGTT
TAATCGGGTTCCCGGATGGTAGTAACATTGGGTCAACAGTATCATGATTG
ATTGATTGAACTCTCACACAGTCTAAGCTGATGGCAAAAATCCAGCCCGT
GGTCACAAGGTAGAAAAACACCATTATTTGGAAGGAAAGAACGTACGACG
TACTCTCCATTCTAAAAGAAAGCGGCAATGGTACAAAAAATACTCGGAAA
AAGCGACATCTCCAAACAAACAAAAGGTAGAAGAAGAAAAAAACACGTGT
GGCTATCATTTCGAGGAGAAACCCACCGTTATACTACACGCTTTCATTAA
TTGCCATGCAGTGACACCAAACAAAACAAAGACGAAAGACACAATGAGCT
CGGAATACAGCTCAATCTATTTCATCGAGGTCTAGGATTGGATGGGGTTG
GTTATAGTCTGAATTTTCATCAAGTAGTCAGACCTGTTCATATATAGAAA
AATGTGAAGGAATCTAAACCATGCAACGTGCGTGGTTAATTATTATTTTA
TTTTTTGCCCTCTCACAGCTCCAAGGTGTTGAGGGGGGATGGCCTGGTCG
GCGGGAACCCGACGATGAACACTCCCCGGCTTCGTAggggGGGGGGATAG
CTTCCTCTTCATTTATTTTATTTTTTTTACCTGTATTGGTATTCCTATAT
ACGTAGGATATTTTGTTTGTGACTCAGCTTCCGAGTTTGGAGCGATGGGC
TCTACTTCCTTTTTTGGGGTTTTCCTACCCTAACCTGCTTCTTGTTTTTC
TGAACCTGTTACTTTTAGGAACCTGTATCATATGTTTTTCGCAAGTGTTG
GACTTTCTGGGTCTTTTTTATTTTATTTATTTTCCTGTACCTTATTTTGG
GTTAGCGTGTGACCACGGAAATTCGTTTCTTTGCCTTGAAGAGTAAGAAA
GAGAAGGGTACTGGATAGAGGTCAGAACGGTTTTTAATGTGAAGACAACA
ACAACAACAACAACAACAAGCATCTACAGACTATTGGCTGCTATAAATCG
AACTAAAGTCCACGTGGGATTTAACCATTTAGTCTAATCGGGTTATGTTC
CCCGATGGTAAACGGTATAATAGAGTAAGTCATCACTTGTAATATATATG
GTCATCACGTATAGCAGAGTATGGATCAACCGGGTAAAGGCCGTTTTAAA
CGAGGACAAATTCGCTTCCAATTTTCCAATATGCCCTAAATCGTGAACAT
GTAGGAAGGCGTTCAGCAATGTTTTAAAAAAAAACTCCGAAGCGATTGAG
GCCCAAAACTTGGCGCCAATCTCTTCCAAGTTTCTGCCACACTTTCCAAG
TTCGCCGGCAACGAAGCGTAAGGACTCCGTAGGCGGTACCACGAGGTCCT
CACTATCGGGTATCGGCTAGGGCCATGGCTGACCGTAGAAAGCGCGGTGC
TCCTGTTGGTTTGATGTCCTCTCCTCGACCGAGGCAGCGCTTCCGACCCT
GCAATCGTTCATTGGACACAACTGCTGTATATGGTTTGTACTTGTGGTTC
TGCTCGTGAGTGCTGCTCTACGTCGTGTCCTTGTGACCAACTCCATTTTA
CCATTACAATCGTTCATTGGACACAACTACTGTATATGGTACGTAGTTGT
AGTTCTGCTCGTGAGTGCTGCTCTACGTAGTCCTTGTGACCGACTCCCTT
TTACCATTACAATCGTTCATTGGACACAACTGCTGTATATGGTACGTAGT
TGTGGCTCGTGATTTGTACTTACGTAGTGTCCTTGCGACCAACTCTCTTT
GGACACAACTGCTGTATATCGTACGTAGTTGTAGTTCTGCTCGCGAGTGC
TGCTCTACGTAGTGTGTAAAGAAAACCAGAACGCGCCTAGACCTTCTGAG
CATCCCCCAGTCAGGGTGAACAAATGTCAAAACGTTTAGGTGGGATCATA
GGCTGCAAATAGCAAATACAAAAACGCACGGAAGTCCAAATAACACAAAG
GTGTACTCTACGTTTGCAATGACCAGATCGACTCCGTATTTACGTATCCA
GAAATTCGGACATTTTGAAATAAAAACTCGGAACGTTTAAAACGGCCCTA
AGGTTGTCAATCCTGCTGGTCGCCAGCTGAACAGGGAAAATAAATATTTA
TCTGTCCCGGTTCATGCCTGGGAATTTGGTCCCGCGAGACGGGTTTAGCC
GTCCCGACCCGCGGCAGCCTGCCCATTTTCCATGCTCAGACTTAATCTGG
TGCTTACTGCTTGCTCGCGGGATTGCTTCCGATTTCCGCGGGGGCGTCCA
TTTATTTATTTCAACCAGCAGAGTATGGATCAGTCGGGTAAGGTTGCCAA
TCCTGCTCGTGGTCAAGTGAACAGGGAAAATGAACATCTCCCTGTCCCCG
TTCGCGCCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCCGTCCCGCCCC
GCGTGAGCCTGCTCGTTCTCCACACTCAAGCTGAATCTGGTGCTTACTTA
CGGGATTCCTCCCGATTTCCGCGGTCGTCCCGATTTCCGCGGTCCTCCCG
ATTTCCGCGGCGGCGTCCATTTATTTAAACCGCCAGACGCCACCGGGTCA
GTCCCGAGTTCATCAGGTCACACAATTGCTTACCGATGGCGTTCATTGCC
GTGAGTCCGCCGGCACGGGGCCAGTACTCCTCAAGCAGTAACGGGTGCTG
CCTTTTCAGGTTTCACCATGGACCAATTAATGTGCGCCTCTCTTTTTTCA
CGTAATATCGGGGAGAAACCCATCGTAAGACCAAAACGGAGGCAGAAGCA
CACGATGAACTCAAATATACGTGAAAGTAATGATAAACTGGTGAACGGTT
GTTGAGTAATTTCACAACTGATAGCACGACCGATACTTTGCAGTATTAGT
ATAAAGTCATAACATATAGCAAGATAAGGATCAACCGGGTAAGGTTGCCA
ATCTTGCTCGTGGTCAGCTGAACAGGGAAAATGAATATTCCCCTGTCCCC
GTACTCGCCTGACGGGTTCGGCAGTCCCGTTTGCTCATCTCGCGACTCAG
GCTGAATCTGGTGCTGATTCCTCTCGATTTCGGCGTCCATTTACAACTTA
AACCGCCGTTTTCTTCCCATCCTCTGGACTCATCTCCATACTCAGGCTGA
ATCTGGTGCTGATTCCTCTCGATTTCCGCGGCGGCGTCCATTTACAACTT
AAACCGCCATATATGGTAACAGTTAATGTTTAAAGAAATCAGAGCATTGT
TGTTTCTCACATCCAGCGTGTTGATTGCCAACCCGAGAGAATAATTGGAA
GGTTTAGATGCGTTCAGATTTTTCTCTAAACTACTTTACATGGTGACGCT
CCTCGTGGTCTGCTAGAGTACAGGAACTTCTGACAATCTTGTGTTTATAT
TTTTCTGTCGTTTCCGACATTACGTTCAACGTCGTACCAAATGACCCTAC
ATACATTATTATTTCCGCACATAAGTCCGATCTCTCGAACCCGTGGTCAC
AGACGCAGGCTTCCCTTTCCATACCATCATACATACTGATCATACATACT
GTTATATGCGATACGGGAAGGGACGGCTGAACCTGCCTCGCGAGACCACA
GTCTTGGCGCGAACGGGAACAAGAAAAAAAAACATTTTTCTTGTTAAGCT
GACCACAAGCAGGATTGGCAACCTTACACGGTTGATACACACTCTGCTGT
GAGTGATAAACTTACTTACATATTAGAAGCCGGCCGCCCCGGTAGCTCAG
AGGTATCCATGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCCGGC
AAACGGGATTTTTCTCACTAAAAAACTAAAAACTTAAACTAAAAATGTCC
AACGGGTGGAGAACGACTAAATCGTTAGTACACAAAATCCGACTTCACGG
TCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGAGAAAAATTAAGGC
ACGCACCGCAGAAAGAAGGTGGATGAGAATCCTGCACCTGTGTGACCCCG
GCTGGAACGTCCAACGAACTTGATGTCCAGAATGAATGGGAAGAAAACAC
ACACACACACAACATACATAAAAATACATAAAATGGGTACAGGTACTAAC
TACTGTTGTACAGTACCTACTTCCCACTTGGGAGACTTTAGAATACTGTA
ATACTGTACGAGGCCGAAATAAAAATGAGGTTCTTGTCCCTGCCGAGTTT
GGTGGAAAAAAAACTACACCTGGTACTGTACTTGCAGGTGGGTAGAGCCT
AGCTCATTTTTTATTTGAATCTTAATGGCGTATTACTATACTGCCTGTAA
TACTGTGATAGCCTATTTTTTAAAAGAAAAATCTGAACGCATCTAGACAT
TCTGAGCATCCCAGTCAGGGGGGAAAATGTCAAACCGTTTAGGTGGGATC
ATAGGCTGCAAAGACAACGTTTTGAGATTTTTTCCCCCCTAACCGGGGGA
TGCTCAGAAGGTCTAGGTGCGTTCTGATTTTTTTTTAAAACCTCTTTATG
ACATTTAAACGGGTTCCCCGATAGTAGTCACATTGGGTCAACAGTATAAT
ATCGGGGATAAACCCACCGTTATACTGTATACTTACATTAATCGCCTACT
ATTAAATATTACTTATTACAAGGACCAAGGGCGGGATGGGCAACATTACT
GAAGCAGGTTGATCTATAGCAGGATTGGCAACCTTACACGGTTGATACGC
GTACAGTACAGTACAAAACGCACAAAAAATTACCACACCTGTACCAAGTA
ATCCCTCACGCAGCATTCGCGTTCGCCCCATGTAAGAGAGCAGTTTCTCG
GGATATTCATTGTAAGCGAAAGTGTGTGTGTGTGTATGTCTTGTCATCCC
ATTTGTTCTGGACGTCAGACATGTGGACGAATCAGCCGGGGTCACACAGC
AGTGGATTTCTCATCCACCTGTGATTTTTATCGCGAGAAGGATTCAGCCT
GTCTCTTTGCCTCGTCGACCGTGCAGTCGAGTTTTGTGTACCCACGAATT
AATTGTTCTCCCCTTGTTGGGCATGATTTTTTTTTTAGGGTAAGGTCAGC
GTGTCTAAGTCTTGTAGATCATGTTCCTCAGCGACCTTCGCGAAAATGCA
GCTCAAAAACCTCTTCCATGGCACACAGATATGTACAGTACACACAGTAC
AGGTGCATGCCACCAATATAAATGTTGTTTCCAGAACAAATGCAGACCAA
TTGCAACCTTTTTTACAATCGGCGCGTAAATAATCTCCAGAGGTGTAGTT
TTTTTCTTAATTTTATTATTGTTCTCAATTTCCGTCAACGGGGCGCTTCT
CACTTCGCGCATACCGCCGCGTTGGCCATCCCGTCGGAGGCTGTGACCAT
AATGTCTCATATTCAAGCGTATTGGTTGCCAATACGAGATACAAATATAC
CGTGCACACAGGGGGTCAATCCCGCTTGTGTCCTGCTGAACAGGGGAATA
ATACCCACCTACCTGTAACAGTAAGCTTTTTTTTATTTATCGCGATCCAA
GTTAAGAAGGATGAATAGCGTCTAAGAACCTTATTTTGTACAGTAGAAGT
AACTAGAAGAAAACTTGATGGTGTAGGGCAATTCATGGCGTCATGAGCGT
GATCACTCATGGAAATTCCGAACATTTCTTCCGTTCGCTCTGGAGTGTCA
CCCCTCTTCATGTTCAAGCATTACCTTTACATATTACTCTATTAAAAGCT
CTAATATTAGACTAATATTAGACTTTTGAACACGACAAAAAAGCTACAGT
ATGAAACGTAGATAAATTTGTACAAGCCTAGGACCGTGTCCCTACTCTTT
TTTGAAAATAAAAACGATCACGAGCTCGTTGCTCCTCGAACCCGGTATTT
CCAAGGGAAACCCATAAGTAGGTGAGGTGAGAGCTAGGGTACGCTTCGGG
CAGGATAGCAAGTGCAGCAGCAGCCACAAAATACTTGGTAAATCCTTAGC
TCTAAGAAGGTAAGGTAACGTAAGGTACTTGTTTCTCTCGTGAAGACAAA
GGAAACACTATTATAAATACTAAGACTATTAATATATCACTGCTGTCGAA
ACCCCGTCCCTTACATGGTATTAATAGGTACCCTTTCACATACTCTATTA
ATAGTACTAATAGTACAGTTGTCATGCGATACTACTGTGTACACCCGCTT
TTAAGACGCTGTCATGATATCCGGTCCAACACACCCTTGGGCAGGCGTGC
ACAGACCTGGATACCCTGACGCAGCAGGCAACGTTGACGTCGAGCGCAAC
GGCGGAGGCGGACGCGAAGAAACAGATCAACTCCGTCATCACCAGGTGTG
TGTGTGGATCTTATCTGTATGGCCTTGTGTCGCCCTCCGAAGGCACATCC
TTTGTCAAGGCGGCTCATACTTTCTATTTTGGTTAGGGAGATTTGCGCGC
TCGAGTTGAGACCCTCTACGCCTCCCAAAAGTTGATGTTCGTCTGCGCCT
CCATCTGTACCGCCCCCACGAAACTCGTAAGGGCTATCGGAAATTCGTGA
TCCCCTCTTCGTTGCCAAGACTCCGCCGCTATCTTCTCGCGCCGTTGTCA
TGACTCCGCCGTGGCAGCACGAACAATCGGGTAGCCCACGCGAAGGGGCT
GCTGCAGTCGATGCGCGAGGAGACGGAGGCGATGAAGAGGGATCCGACCA
GGGCAAAGCCTTCAGAAGTACGAGTTCGAGAAAACCTGCAGAACACCCTC
ACGCGCAAGTTCGTCGACCTCGCAAAGGACTACCAAAATCGACAGGTGTA
TGCTTTGTATAATTGAAACATACGTATTGGTGGCTGGAGTTGCCGTAGAG
AGGCGTTCTCCTGAGAGAGTGGCGTGGGTATCGGGGTAGGGAGGGCTGCG
GGGGGGGGGTTGAATCGGCAGGGTCGAAGCAGTGGTGTTCCAAAGGAGTT
GTTGACGTGCCTAGGGTCGCTGCTTGATGTCGAAACGCCTACATAAAACA
TAGTATAGCAGGAGAGGAATACTGACGCGCGCGCCGACTCTTCCTCGCCG
AATCGACGGTTTCAGAACAAGTACAAGACGTCGGTAAAGAAAAAGGCTGA
GCGGCAGATTCTGGCGGTGAAGCCGACGGCAACGGAAGAAGAGCTAACGG
CCGTTTTCGAGCAGGAGGTGAAGGGTTTTTTTCTCTCCCTTTTTCTGTCG
CGCGTTGCGGTAACGCTTCACGTTTCGTCTGACATTTTCTCACTTGCGAC
TGTCATAGTACTCCTACTGAGTGTTACAAGAGCTCGTGTATCTTGACACA
TGATTTCAGCGTGCCGAACGAAGCATACATAGCTTTATCGAACAATTAGT
CGTGTGACTGCGGTTTTTGAAATTGCACCGACGGCCTGTGTTCTCTCCAT
TGCTTTTTCCCTCAACGCGTGATCCATTACTCGCTCTTGTGATGCTGCTT
TCCTCCGACCTTCCTCCGACCTCGCGGCAAGGACAGGATGGAGTGCAGCG
GGTAATGGAAGCAGCCATCCTGCAGCAGGGAGACCCTGTGGAGGTCACAC
ACGGTAACTCATCTTGACGCGCCTGTCGTACAAAAATCCATGCCCGCCTT
GTCGTGGCTACCTCTACACAAGTATCCTGCTATAATAGTGCACTATCTAT
TCCACAAACAACATATGCACGTAAGTTGTCTTGTACTCGACAGGACAGGA
CATGACGAGTCACTCATGACTCTCACGGCGTTTTGATTTGAAAGGCGCCC
CTACCCAGCTCAGGCGGGCGGTACGGTTGGTCAATATTGGTGACTTATCC
TTTATCCACCAAAACCATGGAAGACAGCTGTGGAGCAACTGCGTCGATTG
CTTCGTACCGGAAGCGCCTCGCTTGCCACAAGTGTGAACTGAAAACCGCA
CCCTGTTTTGGGATTGAACGCAAATTTCGTAGAAGCGCACACATCTTCCG
CCGCTCAATACGCAAGCATTGCAACCCCGGGGGGGTGCCTGACGAGTGCC
GCCGCGCGATTTTCTCGGCAGCCAAGCTTTCATGAACAACGCAATATCAA
AACACATGCAGCGTGGTTGAAAAGACCTCGCGCCAAATTTTGAAAGAACT
TGTCTTGGAGTTCCGGTGCTGCTTTTTGTTTGTATTGTATTAAGTGTAGA
AATAACGGGGGGAGAGGGAGCATTTTTATACCCCGGATATCTTACACACT
AGGAAAGCTAATGAAATTGTCCTTTATATATTGTAGTGGTAATTATTTGT
TGGAGCTTCTTCCGTAAGACACCTCTTCCTCTGTGCTGCTTTGTTACTTC
GTTGCTGACAGTCTTGGAGGAGGTCAAGGATACGTACCGCGACGTGCGAC
GGTTGGAGGCGTCCATCCTCGAGCTGCACAAAATGTTCATGGATCTGGCG
CTGCTCGTAGACCGACAGGGCGAGATGCTGGATCAAATAGAGTACCAGGT
ACGTTTCATTTTTTTTTTGTTACATGGCTTGTCACAATCTTTCTTGATTG
TTTCGTGCGAGACTGTTTTTTTCCCGCTACTGTACGACTTTTTTCAGGCT
TTTTTAACGTTCCGTCTACGTAAACACATTGCGTATCCATGATTTCTCCG
TTCGTTCTGACCGCGGCGTTATTTACGCCCGAGATAGCATTCTCCCCTAA
TATCGCTAGTCTATAATAATACAAGAGCGGGTACAGTATATGATTTAAGC
ACGCTGAGCACACCATTTTCAAGTCCTTCCGAGTTTTTGCCCACATTTTT
CTCCGCAGGACTACGTAGGAGGGGCCTACTCAACTTGGGCGTCGCTTCAC
GCCACCTTACCAGTTTATGTTTTTATGTATGTATGGTCAGACATATAGCA
AGGGTAAGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTG
AACAAGGGAAAATGAATATTTCCGTGCCCGCGTTCGCGCCTGGGCATCTG
GTCTCGCGAGACGAGTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCT
CCATACTCAGGGTGAATCTGTACAGGGGCCGGATTCTATCGTGCCCTCTC
TTCTCACTATCTAAAAGTATTACAGTATCGTATTATCGTACAGCAGTGCG
AAATTTTTAGAAATTTTGCTTTTTCGGGCCCGACGAAACCGCGTTCGTTT
GAATAGCCGCCCTGCCGAAAAGGTTTTACGACGGAGCGTGCAGTACCAGG
CCGCTTGATATTTTACTATACGCCGACGTTGACTCGCAACGGAGGCAGGA
AGCTCCTGCGTGTTGATGACCGTCGTTGGCTGTAGCGAACGGCGTTCCGG
AATGTTGCAGTATGTTTCGATCTCCCACCGACCCTCTTGTAAACCGGGTC
GTGAAATTATAGGCCATGCCGTCTATAGGGAGTCGTCGTCAACCCTCATA
TATCTCTAGTAATAGTCTCTTCATATGGCCCGACTAACCACCAAGATTAT
GGGAGGCGAGGTTACTGCGAGCCGTTAGGAATGTTGCAGTATGTTTCGAT
CTCCCACCGACCCTCTTGTAAATCGGGTCGTGAAATTTTAGGCCATGCCG
TCTATAGGGAGTCGTCGTCAACCCTCATATATCTCTAGTAATAGTCTCTT
CATATGGCCCGACTAACCACCAAGATTATGGGAGGCGAGGTTTCTGCGAG
CCGCCCGGAATGTTGCAGTATGTTTCGATCTCCCACCGATCCTCTTGTAA
ATCGGGTCGTGAAATTCTAGGCCATGCCGTCTATAGAGAGTCGTCGTCAA
CCCACATATATCCCTAGTAATAGTCTCTTCATGTGGCCCGATTAACCACC
AACATTATGGGAGGCGAGGTTACTGCGAGTTTCCGTTGTTGTTGTTGATC
ATGTGTACAGTACGTAGCAGATCGGACTCGACCGTGTAAGGTTGCCAATC
CTCATTGTGGTCTGCTGGTTAACGAACATAGATGGAAGTCCACGTTTCCA
AGTGGTACATGTAGCGGTCATACGCCCGGTCTACACCAGGTCAAAAGCGG
CAAAAGTATTCACAACTTGACACGGGTCACACCAAGAACTTGACATGAAA
GTTTCGTTCACGATAACTAAGTGTAGGTGGCTTAATTTCCGACGCTTAGG
CCAGATTGTAACGTATAATTCCAACAACGTTTCTTGCGTGGCTGACCACA
GTTTGTGACCCGACATATGCTTCATTTCTTGAAGTCACTTGTGTATGTGG
CAAACGATGCTATGTAAGAAGCGTTCTAGCTTGACGCGGAGTAGAGAGCG
TTTGCAAAAGTCCGTCCAGTTGTTGTCCGCATTTGCCTTCTAAATAGGCA
ATATTAATCTTACATAAACGTTTTACGCTGCCAAATTTTTCACTTCCCCA
CCATCTGATGCGTGCCGGAAACAGGTGAAATCCGCATCGGATTACGTACA
AGACGCCAACACGGACCTCCAACACGCAGTCGAAACGTCCAAGACCATCC
GAAAACGACAGTGTTGCATGCTCGTGATTGTCTTGATCATCATCGCCATC
ATCGTTATTTTTCTTTTTGTCAGTGGTGTCATCTAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig93:84710..96945+ >mRNA_A-nodosum_M_contig93.16.1 ID=mRNA_A-nodosum_M_contig93.16.1|Name=mRNA_A-nodosum_M_contig93.16.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=960bp|location=Sequence derived from alignment at A-nodosum_M_contig93:84710..96945+ (Ascophyllum nodosum dioecious)
ATGAATGATCGACTTAGCGAGCTCACTGGAGCCGGAGCAGGCTCAAGGGG
CGTGGCATATGCTCCCTTCGAGGTTTCGATCGACGCCAACGAAGCGGGCA
ACGGAGGAGTGACATGGGGTGGAGGCGGTGGAGGAGCTGGTGGCGGAGGT
TTTATGGAAGCTTTCTTTGAAAAGGTTAACTCCGTGAAGAAGGACATCGA
TGCTGTAAAAAAGGCGTGCACAGACCTGGATACCCTGACGCAGCAGGCAA
CGTTGACGTCGAGCGCAACGGCGGAGGCGGACGCGAAGAAACAGATCAAC
TCCGTCATCACCAGCACGAACAATCGGGTAGCCCACGCGAAGGGGCTGCT
GCAGTCGATGCGCGAGGAGACGGAGGCGATGAAGAGGGATCCGACCAGGG
CAAAGCCTTCAGAAGTACGAGTTCGAGAAAACCTGCAGAACACCCTCACG
CGCAAGTTCGTCGACCTCGCAAAGGACTACCAAAATCGACAGAACAAGTA
CAAGACGTCGGTAAAGAAAAAGGCTGAGCGGCAGATTCTGGCGGTGAAGC
CGACGGCAACGGAAGAAGAGCTAACGGCCGTTTTCGAGCAGGAGGATGGA
GTGCAGCGGGTAATGGAAGCAGCCATCCTGCAGCAGGGAGACCCTGTGGA
GGTCACACACGTCTTGGAGGAGGTCAAGGATACGTACCGCGACGTGCGAC
GGTTGGAGGCGTCCATCCTCGAGCTGCACAAAATGTTCATGGATCTGGCG
CTGCTCGTAGACCGACAGGGCGAGATGCTGGATCAAATAGAGTACCAGGT
GAAATCCGCATCGGATTACGTACAAGACGCCAACACGGACCTCCAACACG
CAGTCGAAACGTCCAAGACCATCCGAAAACGACAGTGTTGCATGCTCGTG
ATTGTCTTGATCATCATCGCCATCATCGTTATTTTTCTTTTTGTCAGTGG
TGTCATCTAG back to top
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