mRNA_A-nodosum_M_contig93.14.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig93.14.2
Unique NamemRNA_A-nodosum_M_contig93.14.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig93.14.2 vs. uniprot
Match: D7G5P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P3_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 4.930e-55
Identity = 156/347 (44.96%), Postives = 207/347 (59.65%), Query Frame = 1
Query:  394 VGDLQRELKETKALTEELHNMLRSEKAEKTKLQSRNILLEREVETIEIARRRWLRDDASCRSRGSNLERRLAGNTENLRNFLFGAGASVEAQR-VAAPAGSSAKHTARSSVTRSGSPVARRHSHGAAGGRSPLTPSTGKKDVFAEEDGVAGEDCLGYGGD----HALRRVRDTADLERSELRRRHDVELSKQRSRIENIMLELKKMKAERDGYKRASEIQAELLSGVYSELRACLEEIKSRFAMADTRQSNTYPTRDNRDGDDSVDSSAIR-SALARTTQENEEDPHHQVWFCLSSNRGWIHSGSVNVRTFQILLLEAVLDMALRGVIPSTVRAARDSIREGMGRTP 1416
            V DL RELKE +AL +ELH+ L +E+ EK+ LQ++ +LLEREVE ++ ARRRWLR++AS R RGSNLERRLAGNT NLR FLFGA A  EA R +A    S A  T R S T SGSPVA   +H   GG      +T   ++   E+G    D    GG     +A+RR R+TA+LERSELRRRHDVE++ ++SRIE + LE+++++AERDG K+A+E Q  L    Y+EL+ CLEE+K+           + P   +R   DS      R     R T ++ E     +   L++  G     +  VR  Q LLLEAV       V+P+ V  A DSIR+G+G  P
Sbjct:  317 VADLNRELKEMRALVQELHSALHAEQVEKSNLQAKIVLLEREVEGMDFARRRWLRENASNRGRGSNLERRLAGNTGNLRTFLFGADAKPEATRQLATRDASEAPGTFRPSATCSGSPVASSRAHSGVGGA-----ATTASEMSTGEEGD--RDMAAIGGTTAERNAVRRARETAELERSELRRRHDVEMTAKQSRIERLKLEVRRLEAERDGLKQAAETQVGLFKDGYAELKTCLEEMKAH--------GQSPPPDTSRSPADSCSEEQARPGGDGRGTIKSAEGRERWMQTMLATEEGL----NCQVRMLQGLLLEAVSAATPTVVMPAAVTQAVDSIRQGLGLPP 644          
BLAST of mRNA_A-nodosum_M_contig93.14.2 vs. uniprot
Match: A0A6H5KE49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE49_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 8.770e-46
Identity = 149/370 (40.27%), Postives = 197/370 (53.24%), Query Frame = 1
Query:  322 FPISL**KEQPSIVPPLCALFLVNVGDLQRELKETKALTEELHNMLRSEKAEKTKLQSRNILLEREVETIEIARRRWLRDDASCRSRGSNLERRLAGNTENLRNFLFGAGASVEAQRVAAPAGSSAKHTARSSVTRSGSPVARRHSHGAAGGRSPLTPSTGKKDVFAEEDGVAGEDCLGYGGDHALRRVRDTAD-LERSELRRRHDVELSKQRSRIENIMLELKKMKAERDGYKRASEIQAELLSGVYSELRACLEEIKSRFAMADTRQSNTYPTRDNR----DGDDSVDSSAIRSALARTTQENEEDPHHQVWFCLSSNRGWIHSGSVNVRTFQILLLEAVLDMALRGVIPSTVRAARDSIREGMGRTP 1416
            FP  L    Q S V P C L    V DL RELKE + L +ELH+ L +E+ EK+ LQ++ +LLERE+E ++ ARRRWLR++AS R RGSNLERRLAGNT NLR FLFGA A  EA R+A    S A  T R S T SGSPVA   +H   GG +                  A E   G  G+  +  + D  D L  S L      ++S ++SRIE + LE++K++AERDG K+A+EIQ  L    Y+EL+ CLEE+K+         S +     +     DG +++ S+  R +  +T    EE  + QV                  R  Q LLLEAV       V+P+ V  A DSIR+G+G  P
Sbjct:  288 FPSKLHRFPQAS-VGPTCLLRSHEVADLNRELKEMRGLVQELHSALHAEQVEKSNLQAKIVLLEREIEGMDFARRRWLRENASNRGRGSNLERRLAGNTGNLRTFLFGADAKPEATRLATRDASRAPGTFRPSTTCSGSPVASSRTHSGVGGAAA----------------TASEMSTGEEGERDMAAIGDHPDFLSASSLL---VPQMSAKQSRIERLKLEVRKLEAERDGLKQAAEIQVGLFKDGYAELKTCLEEMKAHGQSPPPATSRSLADSCSEEPGGDGRETIKSAEGRESWMQTMLATEEGLNCQV------------------RMLQGLLLEAVSAATPTVVMPAAVTQAVDSIRQGLGLPP 619          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5P3_ECTSI4.930e-5544.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE49_9PHAE8.770e-4640.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig93contigA-nodosum_M_contig93:71208..76828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2518
Hectar predicted targeting categoryother localisation
Exons10
Cds size1542
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig93.14.2prot_A-nodosum_M_contig93.14.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig93 71731..76375 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870403.700523-UTR-A-nodosum_M_contig93:71207..717301680870403.700523-UTR-A-nodosum_M_contig93:71207..71730Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig93 71208..71730 -
1680870403.8475926-UTR-A-nodosum_M_contig93:76375..768281680870403.8475926-UTR-A-nodosum_M_contig93:76375..76828Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig93 76376..76828 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870403.7154064-CDS-A-nodosum_M_contig93:71730..724291680870403.7154064-CDS-A-nodosum_M_contig93:71730..72429Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 71731..72429 -
1680870403.7265153-CDS-A-nodosum_M_contig93:72657..727111680870403.7265153-CDS-A-nodosum_M_contig93:72657..72711Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 72658..72711 -
1680870403.735768-CDS-A-nodosum_M_contig93:73305..734071680870403.735768-CDS-A-nodosum_M_contig93:73305..73407Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 73306..73407 -
1680870403.753303-CDS-A-nodosum_M_contig93:73770..738871680870403.753303-CDS-A-nodosum_M_contig93:73770..73887Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 73771..73887 -
1680870403.7676075-CDS-A-nodosum_M_contig93:74253..743341680870403.7676075-CDS-A-nodosum_M_contig93:74253..74334Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 74254..74334 -
1680870403.7777987-CDS-A-nodosum_M_contig93:74710..747681680870403.7777987-CDS-A-nodosum_M_contig93:74710..74768Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 74711..74768 -
1680870403.7898853-CDS-A-nodosum_M_contig93:75044..752561680870403.7898853-CDS-A-nodosum_M_contig93:75044..75256Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 75045..75256 -
1680870403.7987986-CDS-A-nodosum_M_contig93:75415..755421680870403.7987986-CDS-A-nodosum_M_contig93:75415..75542Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 75416..75542 -
1680870403.8117812-CDS-A-nodosum_M_contig93:75946..759991680870403.8117812-CDS-A-nodosum_M_contig93:75946..75999Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 75947..75999 -
1680870403.8355668-CDS-A-nodosum_M_contig93:76336..763751680870403.8355668-CDS-A-nodosum_M_contig93:76336..76375Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig93 76337..76375 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig93.14.2

>prot_A-nodosum_M_contig93.14.2 ID=prot_A-nodosum_M_contig93.14.2|Name=mRNA_A-nodosum_M_contig93.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=514bp
MLRSEKAEKTKLQSRNILLEREVETIEIARRRWLRDDASCRSRGSNLERR
LAGNTENLRNFLFGAGASVEAQRVAAPAGSSAKHTARSSVTRSGSPVARR
HSHGAAGGRSPLTPSTGKKDVFAEEDGVAGEDCLGYGGDHALRRVRDTAD
LERSELRRRHDVELSKQRSRIENIMLELKKMKAERDGYKRASEIQAELLS
GVYSELRACLEEIKSRFAMADTRQSNTYPTRDNRDGDDSVDSSAIRSALA
RTTQENEEDPHHQVWFCLSSNRGWIHSGSVNVRTFQILLLEAVLDMALRG
VIPSTVRAARDSIREGMGRTPQAWPSEFRSLDADLPQSLLVHLGENGLDQ
PENIGKVCDEHRSVDAESAAVMKGTSPLSREVLYHLGQNRPPQHSGGRDQ
TAPAPCVENRLGENDRAGGDLQRTQDKDEAQVVLVDEERIRMSSGGRFPR
KVPAEDCLKEGDVSRDEIVDHSRGPQSAENEAMDSAIAPTQRGSSSGRSP
KEAEAYRCCCCCC*
back to top

mRNA from alignment at A-nodosum_M_contig93:71208..76828-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig93.14.2 ID=mRNA_A-nodosum_M_contig93.14.2|Name=mRNA_A-nodosum_M_contig93.14.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5621bp|location=Sequence derived from alignment at A-nodosum_M_contig93:71208..76828- (Ascophyllum nodosum dioecious)
GGAGCAACCGAAGATTTGCCGGGAGCCAACTCGGACAAGAAATCCTCCTC GACATGATCTCGACACTTCGGTCGCAAGAGGTTAACAAAGAACATGATGA CTATGTTATCTCCCTGAGATGTTTCCACAAGATTCTCGTTGACCTGAACC TCATCGCCTCTCGAGTGTTCGTTCGATCGTACATGCCTATGCCGTGTTGT TTCATCGTACCGTGACGGAAAAACGCAACTACAGGCCGACGTGTGACCAA TGGTTCTCCATGGAGATGATCTGATGATCTGATGATCTGCTTTTGAACGC CTCATGGCGGGTGTCGTCTAGTTTCCCATTTCACTTTGATAAAAAGAGCA ACCGTCTATCGTCCCTCCCTTGTGTGCGCTATTTCTTGTGAATGTGGGGG ATCTTCAGCGTGAGCTGAAGGAGACCAAAGCTTTGACGGAAGAATTGCAC AACATGCTGCGCTCCGAGAAAGCTGAAAAGACGAAGTTGCAGGTGGGGCG ATTCCGAGTATCGAGAATCTGGCACCTTAGCAAGATTTAGGCCTGCGAGT CTATCTCTTGAGATGAGATCAAGAAGAAGTGCATTACATTTCACCTCATT GACGGAAACGAAGTTGTCCTTCCGTAGAGCCTCTCTCGACATTTTCACCC CAGCTGCACGTACCGCCCGACGCCGAGAGTTGTTCAGATCGTGTGCATCC CTCTCACTGCTTTTTGGTGAGGAATCGTTGGTTTTGGACTTGATGGTGCG CCGCTATCACTATGCCACGGGACGAAATACTGGTAGCGAATAACGATATC AACTTTCAATCCACGCGCGAACTTAACAGTCGCGAAATATCCTCCTGGAG CGAGAGGTGGAGACGATAGAAATAGCCCGCAGGTAAACAACTAGACATTT GGATTCCAGGGTGCACTTTTGGTTTGGTCTCATCTATCCTGTGCCCACGG CTGGATTCGAAGGGGATCAGTTAATGTCAGATGAACAACAACAACATCAT CTCGATCTCGTTCGCGCTTGAGCGCTGCCCGAATACCTTCGGGCAGAACC TGTGCTGAGCAACATCTCCAGAGCAATAGTTGGTAGCTGTGCTTGTTCAT CGCTTCCGCACGATGCGGGAGACAGCTTAAACCTAAATCGGAAGATTATT CATAACAACAATCGAGGTATTTCTGGAAGATCGCATTCACGATTCTGACA ACAGAAACGAGGACCAGTGAAGCATCTCAACTCTTCGTGAGTTTCTGAAG CGCGACCCCGCAGTGCATCCCACTCTTTAACCCCAGGCGCTGGCTGAGGG ACGACGCGAGCTGTCGCAGTCGCGGTTCGAACCTAGAAAGGCGCTTGGCG GGGAACACTGAAAACCTCCGCAACTTTCTTTTCGGCGCAGGCGCGAGTGT CGAAGCTCAGAGGGTAAGCGTTTTACTTTCTTAAAACAATGTCATTTCAT ACGATACGCGTCGGCAATCGTTGGTTCTTGTTGCCTGCACCGCCACCACC TCGATGATATCTCCTGTCTCTGCTACCACGGCCCTTTGCATCTTACTGCT CCTACGAACATTTTCGACATAGGTCGCCGCTCCAGCTGGATCCTCGGCGA AACACACGGCCCGATCATCCGTTACGAGAAGTGGGTCTCCGGTAGCGCGG CGTCACTCGCACGGAGCAGCTGGTGGCAGGTCTCCCTTGACGCCGTCAAC GGGCAAGAAGGATGTGTTCGCGGAAGAGGATGGCGTTGCCGGCGAGGACT GTCTTGGCTACGGCGGGGATCATGCACTGCGCAGGTTTTTGTGCTGGCGT CATGGCGGATACATTTTCAAATCCACATGCGCGACGAAGCCCGAAGTCAT CGTTCGGCCGGTGCTGCCCGAAAAACAAGTCATTCATGATCGTAATCGGC CGACAGTTTCGTACTGCTACCAAAGTAAGGCTTTTGGGGTGTTGATCATT GAAGAAAAGGGAAATGAACCTTCAGAAGGCCGTGGGGCTAACGTGCAATG GAGCTAAAATAAGCCAAAATGTTGTCTCCCATGCTACTGTCCGGAACTAA CGTAATGCAGGGTTAGAGACACGGCAGATCTGGAAAGAAGTGAGCTCCGG CGTAGGCACGACGTTGAGGTGAGATCGGCCTCAGGGATGCGGCCGATATT TCCCGAGAGATGACCTCGATCAGACACCCGAGGACACCACCAAGGAGTAT TTTGGTCAGGTTGACCCACCGTCGATGTAGCCACGGCAGCACAAAAATAA CTTTTTCCACGAGTTGCTGAAAAGAAAGGCAACTGTGTCGGAGCTTTAAT TCGTGAAGGAAGGGGGTCGGAGGCACAGGGGACGATTTTCAACTGTTGCG TTACACCGTCATATTCATCGCACGAGCTTCCTACGCTGGAGTGAGTAAAG CTGTAGTGTTTCGCGGGTCTAGATTCAGCCACACAAGCTTCGCCGATTCC TAATGCGCGCCTTCGGTATTGTCGCTCTGGGCTATATCCGCCAGCTGTCG AAGCAGCGTTCGCGCATTGAAAATATTATGCTGGAGCTGAAGAAGATGAA GGCCGAGAGAGACGGTTACAAACGAGTGAGAGAGTGTATTAGTGAGCTTG ATCCATCCACAGGATGGGCGTCGGGTCCTTCGGTACTTTTATCCTATTAA TACTGCTATTAATAGTAGCGGTCCGCGTTCCTGTGCCGTTTGTTCGGAAA ACAGACACTTGGCAATAAAGAAGGCCCCTCGAGCAGCATACCTCTCTCTA AGCGAAAAGACGCGAAATATTATAGTTACCAGGGGCACTCAAAGGAACGT GCGGAGCGGTACGCGTTACCAGCCCGACCCTGCCGACATACCGTTTGGAC GTAGTTGAGCGTAGCTGAGCGGGGTGGATCGATTCCCAGTCCTACATGAC GATCGTACTCAACCCTCTCCTTGGGCCGATTTCGCCAAAAGGCCTCCGAG ATCCAGGCGGAGCTGCTATCCGGCGTTTACTCCGAGTTAAGAGCCTGCTT GGAGGAGATAAAAAGTCGCTTCGCGATGGCAGACACGCGCCAATCGAACA CTTATCCGGTCAGTTGAATGCGTACACCTTAGGCGATAAGCGTGGGCTCT CTCCACCCTAAAAGCTCGTTCCCGGGAAGGAAGAAGTGAAGAGAACACGC GAACGCATGATCTTTCTCGACAGATGGCTCTTGCTTTTCAGATTTCGAGC CTTCTCTAGTAAGGCGTTCGTTGTGGGTTATACCATCGAGGAGGCGTTTA CGAATGCTTTGGTCTAAAATGTCTCCATTGGGTGTTTCATCCCGCTCGTG AACAAAACTGTCTTGTGTCAGCAAATTGATTCACTGTGGGTTCTTGGAAT TTTGGATCGCTAGAGCTACCGCCGAACTGTGATATACACGCCGCAACGGG TGTCGATGGCGTCACGAGCAGACGAGGGACAACAGGGACGGAGATGACTC GGTGGATTCCTCGGCGATCAGGAGCGCTCTGGCAAGAACGACGCAGGAAA ATGAGGAGGACCCGCATCACCAGGTGACGTAAACGAGCGCGCATCTGGGG ATGGACGCGTCAACGTGCCCTCGGCGAGGGATTTGACAGGCGCGAGATGG TATGCCGACATGGATCGCTCGAATGAAACTGAGCTGAACATGACTGGACA CGGTGCATTAAGGCGAAGATGTTAGGGCACTGGACGCAACCGGAGGCGAA TGAAGAGTCGCTCAACGAAAGGAGTGGGAGGAATATTGCAAATCTGTACC CGGGGGAAGTGTTGAATCACCTTCTCTCAGGGATTATTTCAAGTATCTCC TTGCATGATATGCCATCTTATCTCGCGTTTTCGTCCCACAAGGATAAATG AAAAACGTCGCCACTAGGGGACGTTTTGATATGATCCCCTCTGATATCGG AAACAACCCAGCCCCCCCCTTTTGCTAAACGACTCGAAATCACGGGATGG CAGCGAAAAAATCGTTGTTAGGGGATATTGCTATACCACGCCCTCTGAAC TCGAGATATCGGGATATATTCACACCGTATCTTTGCTGGCTACTCTTATC GCCCGTTTTTTTCTTTCCGTTTGCTTTCCCTGCTTTTCTTCTCCGACGGT GTTCCTGGTTTGGTTAGGTTTGGTTCTGTCTATCTTCTAACCGCGGCTGG ATTCATAGCGGATCAGTCAATGTGAGATAAACAATATCAACAACTCCCCC GCTGTCTACTCTTCCGCTGGACGACTCGAAATCGATCCGGACGGTCGGAC GAAACCGTGCGCAAGCAGAAGCTCAATGTCACCCCGCAGCAAGCACCAAG GACTTGCTCGGTCGTACGTCGGCGCTACCCAGTGTCTACTTTCCCGCCCA GTCCCAAATCAACGCCGCGCGCGGTCTTTCTTATCTCTAAATCTCCCAGG TACGGACTTTCCAGATTCTTCTGCTCGAGGCAGTATTGGATATGGCACTG AGGGGCGTTATACCTTCTACGGTGAGGGCTGCCAGGGACTCTATCCGCGA AGGTATGGGAAGAACACCCCAGGCGTGGCCGTCGGAGTTCCGATCTCTCG ACGCTGACCTTCCGCAATCGCTGCTTGTCCACCTCGGTGAAAATGGTCTG GATCAGCCCGAAAACATCGGAAAAGTATGCGACGAGCATCGTAGCGTGGA TGCCGAGTCCGCCGCCGTCATGAAAGGAACTTCTCCTCTTTCCCGAGAGG TACTGTACCATCTAGGGCAGAATCGTCCTCCTCAACACAGCGGCGGAAGG GATCAGACAGCCCCTGCTCCATGTGTCGAAAATAGATTGGGCGAGAATGA CCGTGCAGGTGGCGACCTTCAGAGGACGCAGGACAAGGATGAAGCGCAGG TTGTCTTAGTCGACGAGGAGCGAATACGGATGAGCAGTGGCGGCCGCTTT CCTCGCAAAGTTCCTGCAGAAGATTGTTTAAAGGAGGGAGACGTCTCGCG TGACGAGATCGTAGACCATTCGCGAGGTCCTCAAAGTGCAGAAAACGAAG CGATGGATTCGGCAATAGCGCCAACACAGCGCGGGAGTAGTAGTGGGCGT TCCCCGAAGGAGGCAGAGGCGTATAGGTGCTGCTGCTGCTGCTGCTGATT CCATCTGCGGAACCGCTCGACTCCACCGAGTACCCCGCTCCACATGACCT GGACGAACGATCAGCTTCAGAAGCACGCAAATGTTTTGTGCTTCCTCTGA TCCCAGCGACCCGGTGAATAGTCATGCGTTACACTTCAGCGATATGCTTG AATGTGACTGTGACACTGTGACGGCGAGAGGGGGCAATTTCCGTCATGTA TAACTTCCGGTACGAGATGGCGGCCCTGTTAATAAACTTTCGCCCGAACG TACCACATGAAGAGAGCATCTCCATCGTGGACAGGTTGGGTTGGAGTTGC GACTATAGCGAGGTCTCGCGGACATTGCTTCTCCTCCTCTTCCCTTGCGC TAGAGCAAAAACAACGAGTTTCCACCTTGAGGGGTGGATATGATGTCGAT GTTGACTTTTGTCGCCACGGAGCAGCAGCTGTTGCTACACAATGAAGTTA GTTTTCGGTTGCACGCCACCACGTAGCTCTTGGTAAAGACTAGTCAGTGA AAATCGCGCGTCCTAAAAGGT
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig93:71208..76828-

>mRNA_A-nodosum_M_contig93.14.2 ID=mRNA_A-nodosum_M_contig93.14.2|Name=mRNA_A-nodosum_M_contig93.14.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1542bp|location=Sequence derived from alignment at A-nodosum_M_contig93:71208..76828- (Ascophyllum nodosum dioecious)
ATGCTGCGCTCCGAGAAAGCTGAAAAGACGAAGTTGCAGTCGCGAAATAT
CCTCCTGGAGCGAGAGGTGGAGACGATAGAAATAGCCCGCAGGCGCTGGC
TGAGGGACGACGCGAGCTGTCGCAGTCGCGGTTCGAACCTAGAAAGGCGC
TTGGCGGGGAACACTGAAAACCTCCGCAACTTTCTTTTCGGCGCAGGCGC
GAGTGTCGAAGCTCAGAGGGTCGCCGCTCCAGCTGGATCCTCGGCGAAAC
ACACGGCCCGATCATCCGTTACGAGAAGTGGGTCTCCGGTAGCGCGGCGT
CACTCGCACGGAGCAGCTGGTGGCAGGTCTCCCTTGACGCCGTCAACGGG
CAAGAAGGATGTGTTCGCGGAAGAGGATGGCGTTGCCGGCGAGGACTGTC
TTGGCTACGGCGGGGATCATGCACTGCGCAGGGTTAGAGACACGGCAGAT
CTGGAAAGAAGTGAGCTCCGGCGTAGGCACGACGTTGAGCTGTCGAAGCA
GCGTTCGCGCATTGAAAATATTATGCTGGAGCTGAAGAAGATGAAGGCCG
AGAGAGACGGTTACAAACGAGCCTCCGAGATCCAGGCGGAGCTGCTATCC
GGCGTTTACTCCGAGTTAAGAGCCTGCTTGGAGGAGATAAAAAGTCGCTT
CGCGATGGCAGACACGCGCCAATCGAACACTTATCCGACGAGGGACAACA
GGGACGGAGATGACTCGGTGGATTCCTCGGCGATCAGGAGCGCTCTGGCA
AGAACGACGCAGGAAAATGAGGAGGACCCGCATCACCAGGTTTGGTTCTG
TCTATCTTCTAACCGCGGCTGGATTCATAGCGGATCAGTCAATGTACGGA
CTTTCCAGATTCTTCTGCTCGAGGCAGTATTGGATATGGCACTGAGGGGC
GTTATACCTTCTACGGTGAGGGCTGCCAGGGACTCTATCCGCGAAGGTAT
GGGAAGAACACCCCAGGCGTGGCCGTCGGAGTTCCGATCTCTCGACGCTG
ACCTTCCGCAATCGCTGCTTGTCCACCTCGGTGAAAATGGTCTGGATCAG
CCCGAAAACATCGGAAAAGTATGCGACGAGCATCGTAGCGTGGATGCCGA
GTCCGCCGCCGTCATGAAAGGAACTTCTCCTCTTTCCCGAGAGGTACTGT
ACCATCTAGGGCAGAATCGTCCTCCTCAACACAGCGGCGGAAGGGATCAG
ACAGCCCCTGCTCCATGTGTCGAAAATAGATTGGGCGAGAATGACCGTGC
AGGTGGCGACCTTCAGAGGACGCAGGACAAGGATGAAGCGCAGGTTGTCT
TAGTCGACGAGGAGCGAATACGGATGAGCAGTGGCGGCCGCTTTCCTCGC
AAAGTTCCTGCAGAAGATTGTTTAAAGGAGGGAGACGTCTCGCGTGACGA
GATCGTAGACCATTCGCGAGGTCCTCAAAGTGCAGAAAACGAAGCGATGG
ATTCGGCAATAGCGCCAACACAGCGCGGGAGTAGTAGTGGGCGTTCCCCG
AAGGAGGCAGAGGCGTATAGGTGCTGCTGCTGCTGCTGCTGA
back to top