mRNA_A-nodosum_M_contig920.5.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig920.5.1
Unique NamemRNA_A-nodosum_M_contig920.5.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: UPI00201ED970 (uncharacterized protein LOC124123796 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201ED970)

HSP 1 Score: 142 bits (357), Expect = 1.700e-34
Identity = 96/266 (36.09%), Postives = 139/266 (52.26%), Query Frame = 3
Query:  753 RRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKY--------LVQPVTWDGLDLIGTAVQLLAALTNMLRP 1526
            R+K  + + + +L TL+ LR  + +   A  FG+SKS+  R+F  WL +L+     LVM P   E+    P   R +    V  IIDCTE   ER     A    +S YKQ  TVKF++GI+ SGA  ++S  +GGR SD  +   SG++D     ++  G +VLADRGF  +  +L+  G  L  P  S+G+    + SR++ E +   +NVRIHVER I  LK+W          LV+         +G  VQ+ AAL N+  P
Sbjct:   13 RKKNKLSDEDELLLTLMKLRKNLCMQDLAYRFGISKSSATRIFHAWLDVLYIHLGRLVMWPDTIEM--HLPKCFRNKIFRRVRCIIDCTEIFIERASNNKARSQTYSRYKQHNTVKFLIGISPSGAIIFLSPVWGGRASDKIITLTSGIID-----KFVPG-DVLADRGFF-IDTELATQGAQLMVPAYSKGKN---QLSRQEVETSRVYSNVRIHVERVINRLKDWGVMKGPLPITLVKKANTSAETTVGKMVQVCAALVNLCPP 266          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: UPI00201F33ED (uncharacterized protein LOC124126185 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F33ED)

HSP 1 Score: 141 bits (355), Expect = 3.290e-32
Identity = 94/266 (35.34%), Postives = 138/266 (51.88%), Query Frame = 3
Query:  753 RRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKY--------LVQPVTWDGLDLIGTAVQLLAALTNMLRP 1526
            R+K  + + + +L TL+ LR  + +   A  FG+SKS+  R+F  WL +L+     LV+ P   E+    P   R +    V  IIDCTE   ER     A    +S YKQ  TVKF++GI+ SGA  ++S  +GGR SD  +   SG++D     ++  G  VLADRGF  +  +L+  G  L  P  ++G+    + SR++ E +   +NVRIHVER I  LK+W          LV+         +G  VQ+ AAL N+  P
Sbjct:  255 RKKNKLSDEDELLLTLMKLRKNLCMQDLAYRFGISKSSATRIFHAWLDVLYIHLGRLVLWPDTIEM--HLPKCFRNKIFRRVRCIIDCTEIFIERASNNKARSQTYSRYKQHNTVKFLIGISPSGAIIFLSPVWGGRASDKIITLTSGIID-----KFVPGDVVLADRGFF-IDTELATRGAQLMVPAYTKGKN---QLSRQEVETSRVYSNVRIHVERVINRLKDWGVMKGPLPITLVKKANTSTETTVGKMVQVCAALVNLCPP 509          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: UPI001EE5E33E (uncharacterized protein LOC124254355 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5E33E)

HSP 1 Score: 139 bits (351), Expect = 1.140e-31
Identity = 92/267 (34.46%), Postives = 143/267 (53.56%), Query Frame = 3
Query:  753 RRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVD-GCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKYLVQPVTWDGLD--------LIGTAVQLLAALTNMLRP 1526
            R+K+ +   + +L TL+ LR+ + +   A  FG++KS+  ++F  WL +L   +  L  +  W E +D   PT+ R +    V  IIDCTE   ER     A    +S YKQ  TVKF++GI+ SGA  ++S  +GGR SD  +   SG+++     ++  G  VLADRGF  +  +L+  G  LT P  ++G+    + SR++ E +   +NVRIHVER I  LK+W  +  P+    +          +G  VQ+ AAL N+  P
Sbjct:  257 RKKSKLTSEDELLLTLMKLRSNLCMQDLAFRFGIAKSSATKIFHAWLDVL---YIQLGGLVKWPESMDMQLPTAFRNKTFRRVKCIIDCTEIFIERPSNNKARLQTYSRYKQHNTVKFLLGISPSGAIIFLSPVWGGRASDKVITLQSGIIE-----KFVPGDVVLADRGFF-IDTELATRGAKLTVPAYTKGKN---QLSRQEVETSRVYSNVRIHVERVINRLKDWAVIKGPLPITLVKRGKTSEKCTVGKMVQVCAALVNLCPP 511          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: A0A8B8A2S2_ACAPL (uncharacterized protein LOC110990892 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A2S2_ACAPL)

HSP 1 Score: 131 bits (330), Expect = 2.570e-30
Identity = 95/311 (30.55%), Postives = 155/311 (49.84%), Query Frame = 3
Query:  603 VLTLTGFPSFKALQLHAKYVTNHGAVRSHKQYNPADF------HEGNEYVGGAPRRRRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKYLVQPVTWDGLDLIGTAVQLLAALTNM 1517
            V   TG P++   Q   + V +H    S+ QY           ++ N      P+R    ++   N  L TL+ LR  ++    A  FG+S+ST  +V  TW+  L     PL+  P+  E++   P    +   G V  IIDCTE   +R  +  +   ++S YK RPT+K +VGIT +G   ++S   GG  SD  +V+++ +++ L+         ++ADRGFN  ++ L K  + L  PP  R  +  ++F+  +       AN RIHVERAIG LKE+  L  P+    +DL+ + + + +A+ N+
Sbjct:   11 VKVYTGLPNYALFQWLFEEVKHHA---SNMQYYKGKVSQTDKKYQKNNLEKPGPKR----SLALENEFLMTLMKLRLNLREEDLAFRFGVSQSTVSQVISTWVPFLDKELQPLIYWPSEEEILKYYPQCFHKY-KGTVRCIIDCTEIQIDRPSLAASNAQVYSQYKSRPTLKCLVGITPAGTISFISKPTGGNTSDKKLVKMTNIIEKLEPNDI-----LMADRGFNIQELLLHK-SVKLIIPPFMRTTSSSSQFTESEDTRTKTVANARIHVERAIGRLKEFAILKGPIPLTMVDLMESVLVVCSAIVNL 307          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: UPI0018D96EF2 (uncharacterized protein LOC119746092 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D96EF2)

HSP 1 Score: 135 bits (340), Expect = 3.240e-30
Identity = 115/415 (27.71%), Postives = 182/415 (43.86%), Query Frame = 3
Query:  285 YRVCAHHFNYEDFEVSSAKERDDGSPSVRLRRGAIPSVDETAYRSALKTSVEDCFRWRALAENLLSKDGGDRKTKESASPSAKDVESTSVLSVDALKAMENRHFGCVLTL-TGFPSFKALQLHAKYVTNHGAVRSHKQYNPADFHEGNEYV---GGAPRRRRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKYLVQPVTWDGLDLIGTAVQLLAALTNM 1517
            YR      N +D +   A E D    ++  R   +  V        L    ++C     L +NLL       K K  A    K                +  H   ++ L TG PS++  +   + +  H   ++   Y      E   Y       P R+R   +++   +  TL+ LR  ++ +  A  FG+S+ST  +V  TWL  L       +  PT  ++    P    +   G V  IIDCTE   ER  +  +   ++S YK RPT+K +VGIT  G   ++S   GG  SD  +V+++ ++D L+         ++ADRGFN  ++ L K  + L  PP  R     ++F+  +       AN RIHVERAIG LKE+  L  P+    +DL+ +A+ + AA+ N+
Sbjct:  117 YRSIGIQVNPDDIDDVKALENDHNYANLPFRNRPVSPVYVAHLEEELAKLTDNCGE---LKQNLLESKSNIDKLKLEAQAKTK----------QRFSIRDICHSNELIKLYTGLPSYQLFEWLFEEIKPH--TKNMHYYKGKTSAEDKAYQLKNNDKPGRKRSQALED--ELFMTLMKLRLNLREDDLAFRFGVSQSTVSQVISTWLPFLDRELKAFIDWPTEEDIYKYYPQCFHKY-KGTVRCIIDCTEIQIERPSLAASNSQVYSQYKSRPTLKCLVGITPGGTISFISKPTGGNTSDKKIVKMTNIIDHLEPNDI-----LMADRGFNIQELLLHKQ-VKLVIPPFMRTTTSTSQFTESEDTKTKTVANARIHVERAIGRLKEFSILQGPIPLTMIDLMESALVVCAAIVNL 507          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: UPI000719B1EB (uncharacterized protein LOC106806841 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719B1EB)

HSP 1 Score: 134 bits (338), Expect = 5.910e-30
Identity = 96/302 (31.79%), Postives = 153/302 (50.66%), Query Frame = 3
Query:  615 TGFPSFKALQLHAKYVTNHG-AVRSHKQYNPADFHEGNEYVGGAPRRRRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKYLVQPVTWDGLDLIGTAVQLLAALTNM 1517
            TG PS+   +     V+ H  ++  +K    AD           P  +R  ++++   +L TL+ LR  +Q +  A  FGL +S+  +V  TW+ LL       +  P+    +   P    +   G V  IIDCTE   +R  +  +   ++S YK RPT+K +VGIT SG   Y+S   GG  SD  +V+++ ++D     ++  G   +ADRGFN  ++ L K  + L  PP  R     ++F+  +       AN RIHVERAIG LKE++ L  P+  + +DL+ +A+ + AAL N+
Sbjct:  215 TGLPSYNLFKWLLAEVSPHAQSLHYYKGKLSADDKTWQINNTTKPGLKRSQSLED--QLLMTLMKLRLNLQEDDLAFRFGLRQSSVSQVLSTWIPLLAKELAAFIHWPSKEGTMKYYPACFHKY-KGTVRCIIDCTEIQIDRPSLAASNSQVYSQYKSRPTLKCLVGITPSGTISYISKPTGGNTSDKKIVKMTNIVD-----KFEPGDICMADRGFNIQELFLHKQ-VRLVIPPFQRTTNSTSQFTESEDINTKTVANARIHVERAIGRLKEFQILQGPIPLNMIDLMESALVVCAALVNL 507          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: UPI001CF2EFAF (uncharacterized protein LOC122962407 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF2EFAF)

HSP 1 Score: 130 bits (328), Expect = 1.010e-29
Identity = 104/311 (33.44%), Postives = 156/311 (50.16%), Query Frame = 3
Query:  615 TGFPSFKALQLHAKYVTNHG---AVRSHKQYN---PADFHEGNEYVGGAPRRRRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKYLVQPVTWDGLDLIGTAVQLLAALTNMLRPP 1529
            TGFP++K L L    V +     +  SH++ N   PA    G        R R  TT  E    +  L+ LR G+     A  F +S+ST   +F TW+  L      L+++P    + +  P   +E     V V+IDCTE   ER    D     +STYK RPT+K +VGIT SG   +VS+ Y G  +D  +   SG L +L+     +G EV+AD+GF  +Q +L+ +G  LT P   +G+    +FS+E+ E   + A++R+HVER +  +K W  L +P+      +      ++AALTN   PP
Sbjct:   61 TGFPNYKTLMLCYDIVKDSAKNISFGSHERRNFDCPAVLQPG--------RPRALTTFQE---FILVLMRLRLGLFEKDLAHRFRISESTVSIIFRTWIRFLRLELQELILIPPRDVLQEHMPKIFKEFYPNTV-VVIDCTEVQMERPSALDNQSSCYSTYKSRPTMKSLVGITPSGVVGFVSELYPGSTTDKEITVKSGFLKMLE-----QGDEVMADKGFL-IQDELAGVGATLTIPVFLKGKQ---QFSKEEVEKNKKVASLRVHVERCMERIKNWHILDRPIPVCLAGVASDIFIVIAALTNF-HPP 349          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: UPI001CF3BC88 (uncharacterized protein LOC122962113 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3BC88)

HSP 1 Score: 129 bits (325), Expect = 1.070e-29
Identity = 85/258 (32.95%), Postives = 134/258 (51.94%), Query Frame = 3
Query:  756 RKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSA-HFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKYLVQPVTWDGLDLIGTAVQLLAALTNMLRP 1526
            RK T       + TLV LR G+  N+ + LFG+S ++  + F TW+C L       L++ P+  ++    P S ++     V +IIDCTE   E+     A    +S YKQ  T+K +VGI+  G F + S  + G  SD  + + SGLLD+L+      G  ++AD+GFN   +  +K  + L  PP  +G+    + S +  +   + A+VRIHVERAI  LK ++ L   +    LD+    + + A+L N+L P
Sbjct:   61 RKRTFSPFEEFILTLVRLRLGLLTNLLSDLFGISTASVSKTFRTWICFLGKILKDTLLIWPSKQQISSNLPKSFKK--FPSVRIIIDCTEIFIEKPTTPSAQRATWSNYKQHNTIKVLVGISPDGMFTFFSKLWTGNSSDRHITQQSGLLDLLE-----PGDSIMADKGFNIRDL-ATKKRVLLNVPPLCKGK----QLSTKAVKTTRQIASVRIHVERAIERLKNFRLLQGNLPLTLLDIADDILIVCASLCNLLPP 306          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: UPI0014257389 (uncharacterized protein LOC117100854 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257389)

HSP 1 Score: 132 bits (331), Expect = 1.620e-29
Identity = 92/259 (35.52%), Postives = 139/259 (53.67%), Query Frame = 3
Query:  744 PRRRRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFS-REDAEFATETANVRIHVERAIGGLKEWKYLVQPVTWDGLDLIGTAVQLLAALTNM 1517
            P  +R  ++++   +L TL+ LR  ++ +  A  FGL +ST  +V  TW+  L       +  P+  E +   P    +   G V  IIDCTE   ER  +  +   ++S YK RPTVK +VGIT SGA  Y+S+  GG  SD  +V+ + ++D     ++  G   +ADRGFN  ++ L K  + L  PP  R      +F+  ED +  T  AN RIHVERAIG LKE++ +  PV    +DL+  A+ + AA+ N+
Sbjct:  175 PGVKRSQSLED--QMLMTLMKLRLNLREDDLAFRFGLVQSTVSQVLSTWIPFLAKELAAFIHWPSKDETLKYYPACFHKY-KGTVKCIIDCTEIQIERPSLAASNTQVYSQYKSRPTVKCLVGITPSGAISYISEPVGGNTSDKKIVQKTNIVD-----KFEPGDICMADRGFNIQELLLRKQ-VKLIIPPFQRTTKSTNQFTITEDTKTKT-VANARIHVERAIGRLKEFQIMQGPVPLTMIDLMEGALVISAAIVNL 423          
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Match: A0A8B8B4M8_CRAVI (uncharacterized protein LOC111107245 n=5 Tax=Eukaryota TaxID=2759 RepID=A0A8B8B4M8_CRAVI)

HSP 1 Score: 131 bits (330), Expect = 4.960e-29
Identity = 89/264 (33.71%), Postives = 132/264 (50.00%), Query Frame = 3
Query:  735 GGAPRRRRKTTIDEANSILFTLVILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEVVDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVKFVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLADRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIHVERAIGGLKEWKYLVQPVTWDGLDLIGTAVQLLAALTNMLRP 1526
            G   R RR  ++   +  L TL+ L+ G+ +   A  FG+S  T  + F TW+CLL+    PL   P+   +    P+         + VI+DCTE   ++       +  FS YK   TVKF++GIT SG    VS+G+GGR+SD  ++  S LLD+L+     EG  V+AD+GF    + L K G  L  PP    R+   +FS +D     E A +RIHVERAIG +K +      ++     L+     +   +TN+  P
Sbjct:  236 GERARPRRLMSLQLIDQFLATLMRLKVGLYVEDIAERFGVSVGTYSQYFTTWVCLLYQELRPLNPFPSRDIIQRNMPSCFHT--FPNLRVILDCTEIFVQKSSSLVNQNLSFSHYKHHTTVKFLIGITPSGVISLVSEGFGGRVSDRQMIEKSLLLDMLE-----EGDGVMADKGFTIADM-LEKKGCTLNIPPF---RSSSTQFSSQDVLKTQEIAKLRIHVERAIGRVKNFHIFDGVLSLSLAPLVSQMFSVCCWITNLDVP 488          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig920.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00201ED9701.700e-3436.09uncharacterized protein LOC124123796 n=1 Tax=Halio... [more]
UPI00201F33ED3.290e-3235.34uncharacterized protein LOC124126185 n=1 Tax=Halio... [more]
UPI001EE5E33E1.140e-3134.46uncharacterized protein LOC124254355 n=1 Tax=Halio... [more]
A0A8B8A2S2_ACAPL2.570e-3030.55uncharacterized protein LOC110990892 n=1 Tax=Acant... [more]
UPI0018D96EF23.240e-3027.71uncharacterized protein LOC119746092 n=1 Tax=Patir... [more]
UPI000719B1EB5.910e-3031.79uncharacterized protein LOC106806841 n=1 Tax=Priap... [more]
UPI001CF2EFAF1.010e-2933.44uncharacterized protein LOC122962407 n=1 Tax=Acrop... [more]
UPI001CF3BC881.070e-2932.95uncharacterized protein LOC122962113 n=1 Tax=Acrop... [more]
UPI00142573891.620e-2935.52uncharacterized protein LOC117100854 n=1 Tax=Annei... [more]
A0A8B8B4M8_CRAVI4.960e-2933.71uncharacterized protein LOC111107245 n=5 Tax=Eukar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig920contigA-nodosum_M_contig920:101048..105368 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7668.SPU_024105-tr
PFAMsDDE_Tnp_4,HTH_Tnp_4,THAP
Model size1912
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.48e-29
EggNOG OGs2CQK3@1|root,2S458@2759|Eukaryota,3A7MN@33154|Opisthokonta,3BSRK@33208|Metazoa,3DFYF@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size1509
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870387.7191317-UTR-A-nodosum_M_contig920:101047..1014001680870387.7191317-UTR-A-nodosum_M_contig920:101047..101400Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig920 101048..101400 -
1680870387.7549691-UTR-A-nodosum_M_contig920:103082..1030921680870387.7549691-UTR-A-nodosum_M_contig920:103082..103092Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig920 103083..103092 -
1680870387.7664363-UTR-A-nodosum_M_contig920:105328..1053681680870387.7664363-UTR-A-nodosum_M_contig920:105328..105368Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig920 105329..105368 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870387.7316427-CDS-A-nodosum_M_contig920:101400..1023151680870387.7316427-CDS-A-nodosum_M_contig920:101400..102315Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig920 101401..102315 -
1680870387.7429469-CDS-A-nodosum_M_contig920:102488..1030821680870387.7429469-CDS-A-nodosum_M_contig920:102488..103082Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig920 102489..103082 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig920.5.1prot_A-nodosum_M_contig920.5.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig920 101401..103082 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig920.5.1

>prot_A-nodosum_M_contig920.5.1 ID=prot_A-nodosum_M_contig920.5.1|Name=mRNA_A-nodosum_M_contig920.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=503bp
MEGGSSAGGDGPGIRKRHGHGQGDKARAPKARQTKRCCCGQDWCPTDANA
AFNVPAGEVTRVNWAHALNVRGLLFGKEYRVCAHHFNYEDFEVSSAKERD
DGSPSVRLRRGAIPSVDETAYRSALKTSVEDCFRWRALAENLLSKDGGDR
KTKESASPSAKDVESTSVLSVDALKAMENRHFGCVLTLTGFPSFKALQLH
AKYVTNHGAVRSHKQYNPADFHEGNEYVGGAPRRRRKTTIDEANSILFTL
VILRTGMQLNVAAALFGLSKSTGGRVFVTWLCLLWSAHFPLVMMPTWTEV
VDGCPTSVREQGMGEVAVIIDCTEFTAERMWMKDAAHYLFSTYKQRPTVK
FVVGITTSGAFCYVSDGYGGRMSDNAVVRVSGLLDVLKGQRYPEGAEVLA
DRGFNGLQIDLSKIGMFLTTPPSSRGRADEARFSREDAEFATETANVRIH
VERAIGGLKEWKYLVQPVTWDGLDLIGTAVQLLAALTNMLRPPFCNTADS
VG*
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mRNA from alignment at A-nodosum_M_contig920:101048..105368-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig920.5.1 ID=mRNA_A-nodosum_M_contig920.5.1|Name=mRNA_A-nodosum_M_contig920.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4321bp|location=Sequence derived from alignment at A-nodosum_M_contig920:101048..105368- (Ascophyllum nodosum dioecious)
CCTGACATACCTTGTACGACGTTGGGATTATATCCTGAAGGTGAGCGACT TCGAACGTCTGAACGCAAAGTAAGTCTACTCGAAGGGCAGTCCAAGACTT CGCTTGCACTCTGTACCAACCACCGATTCTTTAAGAAATCTTTTACCTAA ACAGACATCTCCTAAACCTTCTGAGCATCCACCTCGAGTGGAATATTATA TTCCCTCGAGAGCACCCTGAAAGCTAAAGGACCTATACACAATAAGGCCT TATTGGGATACCGAGGCGCCTAAGAGGAGCGTAAACAGACGCCCCACGGC ATAGATTGTTATTGTTCGCGCCAAGCACGATGACAGCGATGCGCCGAGCT CTGGACAACACTTCAGACAGCTCGTCCTGCCCAAAACCCCTTGAAGACTC TCAACGGCTCGAAGGGTCGTGCGTGCGAGTGGTCTACCATACATAGTCTG TTACCACAAATGTAGTACAGTACATATGCTTAGTATTCAGATAGAGGCTC GTATTTTGATCGTATGAACGCCCTTTCTCGCATCTCTAAGGTTTGGCAGA ACCGTGTGAAGTAGACCTTTCTAATGGTCCAAGAAAGCCCGACTCAGCTC TCGAGTTCGCCGAGCAGTCTTTTCTCAAAGTGCCAATAGTAGCTCCGCAG GCGGTCCATGATGGTAACCCGAAATCAGAACAAATTTCGTTGGTACTGTA CGACAGTATAAAAAGAGGTGTTTAGACACAGCTGGCACACAACAGGCAAA CGCTGTAATCGGGAGCCATAATTCTACCTTCGCTGTCAAGTGTGGTGGTT GTTGTTGGTTTACCCCCGCCCTCTTGTAGAAATCCACGCAAAAGCATTTG TTTTAGGACGAGTGAAGTCTCATCAACGGCAGGCAACGTCGTTAGGTGTC TCGTACGAAATGTACTGTACTAATACAGTATATTCCAGATAGGAAGCGCC TGTCGTTTGAAGGCTTTGCGTAGAGGCTCGTATTTTGATCGTATGAACGC CCTTTCTCGCATCTCTAAGGTTTGGCAGAACCGTGTGAAGTAGACCTTTC TAATGGTCCAAGAAAGCCCGACTCAGCTCTCGAGTTCGCCGAGCAGTCTT TTCTCAAAGTGCCAATAGTAGCTCCGCAGGCGGTCCATGATGGTAACCCG AAATCAGAACAAATTTCGTTGGTACTGTACGACAGTATAAAAAGAGGTGT TTAGACACAGCTGGCACACAACAGGCAAACGCTGTAATCGGGAGCCATAA TTCTACCTTCGCTGTCAAGTGTGGTGGTTGTTGTTGGTTTACCCCCGCCC TCTTGTAGAAATCCACGCAAAAGCATTTGTTTTAGGACGAGTGAAGTCTC ATCAACGGCAGGCAACGTCGTTAGGTGTCTCGTACGAAATGTACTGTACT AATACAGTATATTCCAGATAGGAAGCGCCTGTCGTTTGAAGGCTTTGCGT AGAGGCTCGTATTTTGATCGTATGAACGCCCTTTCTCGCATCTCTAAGGT TTGGCAGAACCGTGTGAAGTAGACCTTTCTAATGGTTCAAGAAAGCCCGA CTCAGCTCTCGAGTTCGCCGAGCAGTCTTTTCTCAAAGTGCCAATAGTAG CTCCGCAGGCGGTCCATGATGGTAACCCGAAATCAGAACAAATTTCGTTG GTACTGTACGACAGTATAAAAAGAGGTGTTTAGACACAGCTGGCACACAA CAGGCAAACGCTGTAATCGGGAGCCATAATTCTACCTTCGCTGTCAAGTG TGGTGGTTGTTGTTGGTTTACCCCCGCCCTCCTGTAGAAATCCACGCAAA AGCATTTGTTTTAGGACGAGTGAAGTCTCATCAACGGCAGGCAACGTCGT TAGGTGTCTCGTACGAAATGTACTGTACTAATACAGTATATTCCAGATAG GAAGCGCCTGTCGTTTGAAGGCTTTGCGTAGAGGCTCGTATTTTGATCGT ATGAACGCCCTTTCTCGCATCTCTAAGGTTTGGCAGAACCGTGTGAAGTA GACCTTTCTAATGGTTCAAGAAAGCCCGACTCAGCTCTCGAGTTCGCCGA GCAGTCTTTTCTCAAAGTGCAACTACTGTTGTTTACCTCCAATCAGAACA AAATTACTCAGTACTGTAACACAGTACAATAAGAGGTACTGAGACTCAGC TGGCACACAACCGTCCTCTAGTAGAAATCCACGCAAAAGCATTTGTTTAA GCAGGTCACTTTTGACTTAATATAACGCGCCTCTCTTTCCCACAACCACT ATTGTTCCACCTGATGCTTTTGTTAGGCGAACTATTATGGAGGGTGGCAG TTCTGCCGGCGGTGATGGTCCAGGGATTAGAAAGCGACATGGTCACGGAC AGGGGGACAAGGCGCGTGCGCCTAAGGCCCGTCAGACGAAAAGATGCTGT TGTGGTCAGGATTGGTGCCCTACGGACGCAAATGCCGCATTCAACGTACC AGCGGGCGAGGTGACGCGCGTAAACTGGGCACATGCTCTGAACGTAAGGG GTTTGTTATTCGGGAAGGAGTACCGCGTCTGTGCCCACCATTTCAATTAT GAAGACTTCGAGGTTTCATCTGCAAAGGAGCGTGACGATGGCTCGCCAAG CGTACGCCTTCGCCGAGGTGCCATCCCAAGTGTTGATGAAACTGCGTATC GTAGTGCACTCAAGACGTCCGTGGAAGATTGTTTCAGGTGGCGGGCACTC GCAGAGAATCTTCTGAGTAAAGACGGTGGCGACAGGAAAACGAAGGAGTC TGCGTCTCCATCTGCCAAAGACGTCGAATCTACAAGCGTGCTGAGCGTCG ATGCACTAAAAGCTATGGAGAATAGACACTTTGGTTGCGTGTTGACGCTA ACAGGGTTTCCCAGCTTCAAGGCCCTCCAGGTGATTATTCCCATCTCCCT CTCCCTTTCATCATAAATTTGCCACATCCCGTTAAATGTAATGTTCGTGT ATATTGTCAACTAATTATATACATTGTCTTTATGTTTAGGTCGTATTACT GGTGATCATGTCGGTAAGTGGTCGCCCTTCCACCTCTTGCTTCGCTGATT CAGTTGCACGCGAAGTACGTCACGAACCACGGCGCGGTGCGTTCGCACAA GCAGTACAACCCTGCGGACTTCCACGAAGGAAATGAGTATGTAGGAGGCG CGCCGAGGAGGAGGAGGAAGACAACGATTGACGAGGCTAATTCTATTCTC TTCACACTGGTGATATTGCGGACTGGTATGCAACTGAACGTAGCGGCCGC CCTGTTCGGCCTTAGCAAAAGCACAGGAGGTCGTGTATTCGTGACTTGGT TGTGTCTGTTGTGGAGTGCCCACTTCCCGCTTGTAATGATGCCAACATGG ACGGAAGTTGTCGATGGCTGTCCGACCTCTGTTCGCGAACAAGGTATGGG CGAAGTCGCAGTGATTATCGATTGCACCGAATTTACTGCCGAGCGGATGT GGATGAAAGATGCTGCACACTACTTATTTTCCACTTATAAGCAACGGCCG ACTGTAAAGTTTGTTGTAGGGATAACTACATCCGGAGCCTTCTGCTATGT TTCTGACGGATACGGTGGGCGCATGTCGGACAACGCCGTTGTAAGAGTAT CGGGACTCCTTGACGTTCTCAAGGGTCAAAGATACCCAGAGGGGGCGGAG GTCCTTGCTGATAGAGGGTTCAATGGCCTACAGATCGACCTAAGCAAAAT AGGTATGTTCTTGACAACGCCCCCCTCAAGCCGCGGACGCGCTGACGAGG CACGGTTCTCGAGGGAAGACGCAGAATTCGCTACTGAAACAGCCAATGTG CGCATCCATGTTGAGCGGGCTATTGGAGGACTAAAAGAGTGGAAGTATCT TGTACAACCTGTTACCTGGGACGGCCTCGATCTGATCGGTACGGCGGTGC AGCTGTTGGCAGCTCTAACGAACATGCTCAGACCCCCCTTTTGTAACACC GCTGACAGTGTTGGGTAGATTTACATGCGTTCTTTTTATTCGAGTACAAG TGTTGTTGTTCAGGGTTGTGCTCTTACAAGTTGTGCTCTTACAATTATTC TTTTGTGTTAGGTGGTTAACATTAATATTGAGGGCAGGGTCGAAGTTGTG CGTCATACCAGTGGTTGCGAGGTTAACTCCAGGTTATGTTTATCCTCAAA GACACGTTAAACTTCGTCTGGTAGGTGGACCTTGTTGGCATGGCTCGGAG TTATAGTTTTTGAAGAAAAACCATACGTTGATGGTGTACACTCAAAGACG AGCGAGTGCGATGTCGAAAGCGTTGACCACTGCCGCGTTGTTCACGCCAC CAATGTGAATTATAAAGATAA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig920:101048..105368-

>mRNA_A-nodosum_M_contig920.5.1 ID=mRNA_A-nodosum_M_contig920.5.1|Name=mRNA_A-nodosum_M_contig920.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1509bp|location=Sequence derived from alignment at A-nodosum_M_contig920:101048..105368- (Ascophyllum nodosum dioecious)
ATGGAGGGTGGCAGTTCTGCCGGCGGTGATGGTCCAGGGATTAGAAAGCG
ACATGGTCACGGACAGGGGGACAAGGCGCGTGCGCCTAAGGCCCGTCAGA
CGAAAAGATGCTGTTGTGGTCAGGATTGGTGCCCTACGGACGCAAATGCC
GCATTCAACGTACCAGCGGGCGAGGTGACGCGCGTAAACTGGGCACATGC
TCTGAACGTAAGGGGTTTGTTATTCGGGAAGGAGTACCGCGTCTGTGCCC
ACCATTTCAATTATGAAGACTTCGAGGTTTCATCTGCAAAGGAGCGTGAC
GATGGCTCGCCAAGCGTACGCCTTCGCCGAGGTGCCATCCCAAGTGTTGA
TGAAACTGCGTATCGTAGTGCACTCAAGACGTCCGTGGAAGATTGTTTCA
GGTGGCGGGCACTCGCAGAGAATCTTCTGAGTAAAGACGGTGGCGACAGG
AAAACGAAGGAGTCTGCGTCTCCATCTGCCAAAGACGTCGAATCTACAAG
CGTGCTGAGCGTCGATGCACTAAAAGCTATGGAGAATAGACACTTTGGTT
GCGTGTTGACGCTAACAGGGTTTCCCAGCTTCAAGGCCCTCCAGTTGCAC
GCGAAGTACGTCACGAACCACGGCGCGGTGCGTTCGCACAAGCAGTACAA
CCCTGCGGACTTCCACGAAGGAAATGAGTATGTAGGAGGCGCGCCGAGGA
GGAGGAGGAAGACAACGATTGACGAGGCTAATTCTATTCTCTTCACACTG
GTGATATTGCGGACTGGTATGCAACTGAACGTAGCGGCCGCCCTGTTCGG
CCTTAGCAAAAGCACAGGAGGTCGTGTATTCGTGACTTGGTTGTGTCTGT
TGTGGAGTGCCCACTTCCCGCTTGTAATGATGCCAACATGGACGGAAGTT
GTCGATGGCTGTCCGACCTCTGTTCGCGAACAAGGTATGGGCGAAGTCGC
AGTGATTATCGATTGCACCGAATTTACTGCCGAGCGGATGTGGATGAAAG
ATGCTGCACACTACTTATTTTCCACTTATAAGCAACGGCCGACTGTAAAG
TTTGTTGTAGGGATAACTACATCCGGAGCCTTCTGCTATGTTTCTGACGG
ATACGGTGGGCGCATGTCGGACAACGCCGTTGTAAGAGTATCGGGACTCC
TTGACGTTCTCAAGGGTCAAAGATACCCAGAGGGGGCGGAGGTCCTTGCT
GATAGAGGGTTCAATGGCCTACAGATCGACCTAAGCAAAATAGGTATGTT
CTTGACAACGCCCCCCTCAAGCCGCGGACGCGCTGACGAGGCACGGTTCT
CGAGGGAAGACGCAGAATTCGCTACTGAAACAGCCAATGTGCGCATCCAT
GTTGAGCGGGCTATTGGAGGACTAAAAGAGTGGAAGTATCTTGTACAACC
TGTTACCTGGGACGGCCTCGATCTGATCGGTACGGCGGTGCAGCTGTTGG
CAGCTCTAACGAACATGCTCAGACCCCCCTTTTGTAACACCGCTGACAGT
GTTGGGTAG
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