mRNA_A-nodosum_M_contig92.39.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI) HSP 1 Score: 1295 bits (3352), Expect = 0.000e+0 Identity = 1022/2611 (39.14%), Postives = 1205/2611 (46.15%), Query Frame = 2
Query: 245 NNAMYFAYGCPKVLCLRPDLIPGERILAVSFNPPGSLLAIASTSRVCIWSGGKDHFPLSALPVQLRGLPGKSLLWKRDSSVLAAVSSSGQLILLSVKPKPGARPASERFALPDWFEPQHTRVPTETDGGERDAWADPGEADMAVISTVEAIGSEASAMCLGRFGQHVLVGTESGAIYGVSWEGQIICCYDIVAVPGAPPRV--------GGGPGTGLPDDRMRSADLGAISSLSFNDTLQLLALTTEDGNFFMGALSKNSCWLRNIAVTERGQGSAKTEVVSTAAPAVTAPSDHEPKRDHSDLDAKQISRGWGWRLLGTGRHAVAAAATXXXXXXXXXXXXAPSSLSGRRNGPNGIIETSPPGAAD-------------AVAGAVCVEFSPKG-LMAVGIADGTVLLTRVERYTTGLRSRHKLHISNSMLHKSDSYRLEANLANET--------DL-EGVGMAGETDSKDARPPPSPSLGREGSMSSLWGVEVHHLYCLSLSSLFGPGAPRG---EALGSAGRVLSMCFSTDGCALAVGHERALTVWSTEDGTRLVCTTSKNSDTGDQGSGGFSKTVHPTAVATAAAXXSPSSGAAAKENGNVGARVAVAEQPPQSRHLAAQPSYRAASGGMLDLVAGGARALTWGSEGYRLVSVG------AEVGGTGSVQGIVAFDFFRRARSNLASAVLALQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLAANAPLRHVSTSRAGTHVAVAGARGLAVYSRPTNRWRLFGNIHEEHEVEVAGMCWWGESAIMVASRVKHAFILLLYPRNHLTTKAMLLPPIKLPVGMRPLFMQGAQESGPKPSTKVFFLLVAGYTSYLLYRFSCTGAL-ESGNVTFGVLHEGPLPHVVGNMG-DRH-----PLGQRSISSVTATPPPPAKPDQIPLGGGASAAERSSKAARPGLDGSMDNDNDHRKCGHSQASSVVPSRPSTSSTGPVGSRVAVINGDSAWRRDERFFGGQQGSSPGCQPSELPAMIGPPKRVMLLPEVHPRTLALLDYDGNLVTMDTSNGEVKAVADGVESVIDLSEVSEAWEVGGSPLLVHPCYLLRTKGRVG-----------------GGGAGGGDG---EMAQEFSVWCPAMRLDPCPPSVRRLLTPGRE----------PSPVFSLEPSTSCDPEQVDLGLQPLLGTMVLASQVVCPPRLLSTPPLPPCYELRTHLRPVLHMVLRHLLIASQFQLLDSPSILSPSRPGANRLLGSPGTAGG---------------AGEGDNAVAVALGGAAPGA------------SEGAGVAPGD----------------------------------------------GSFNDG------------------------------------------------GSGDGGVSERSRGVVQA--------------DDSQAAP-----------------SRGTGDPPADEGPG-------------------------------------------------------------------------------------------------------------------------------------------------------------------GGRQRD-------WHGTNSD-------------------AFEIAVAV----------------------------------LKRCREDG----------------------VLVEALPETLE---------------LLLRT----------CMEALHVAGD---------------------------RAKAQAQAVAARSNRV-------------------------------------------------------------------------------------RNPKVDVNGVSGNSGG--------------------------------------------------------------------------------------------------ASSSPGSPR-------------------------------------------LAVSELELARAVMTDSVYLAQLAPECFHEVVARVARKTEPERYGLMFPLHRT-----VEEDDQHGASTAAT-------------RAHLEGPQDNGER-RGGGAGCKTSGVVG--LGLSWGRLVHPTHLFHECVTAGRLTTAAWFLPLVRDDVAYDAARRHTGPDGPLSEEERRRYMPPEMWAMTGKDWSFGLSHALSCVLLSASLSSNQHAFLPEVWLFARKREKSAPYHHYHRGDPQRVGK---------AGEPDEAVFEPPWYRRGQGAAIEAAQAAELKK----SGSRSI------------GALAGAGVDPGETLV-------------SPVPESALTCGEDTHFGRTSRLRLRALRRLSSGGGGSLK--EEKGDEDRAGTGSHIEAVAPIADPGSRPQSSSPQPYSQRSEAERVRLYYLPLTKDAASVVSRFMWQELNELRVNTVTKAFQSLTSSPAAREAGLNPGEVLSTLTPARRSMVRSLPSSPMETMAGLMVALAE 5638
+ MYF YGCPKVL LRP+ PGE+IL V+FNP GSLLA+ASTSR+C+WSGGKDH PL L + LRGL G SLLWKRDSS+L VSS+G+L+L+SVK + GARPASERFALPDW EPQH R E DG ERDAWADP EAD+A++STVE+IGSEASAMCLGRFGQHVL+GT SG+IYGVSWEGQI+CCYDIV P PRV GG G + R SS+SFNDTLQLLALT DG+FF+G LSK +CWLRNIAV +R + +A +A A P+ P ++ D GWGWRLLGTGR+AVAAA +LS R+ +G+ + G A GAV VEFS KG LMAV +ADGTVLL RVERYT+G+R+RHKL ISNSMLH+SDS+RLE LA+ET D+ EG G G T DAR + + REG+MSSLWGVEVHHL CLSL GPG G LG AGRVLS+CFS DG ALAVGHE ALTVWSTEDGTRLVCTT+++ D D G XX +PP S AA+ G LDL+AGGARAL+W EGYRL+SVG A VGG QGIVAFDF RRARSNL+S++L+LQGSDRIALVDSQPWSAQVLLWRVLPVHPGYL++NAPLRHVSTSRAGT+VAVAG+RG AVYSRPTNRWRLFGNI +E EV+VAGMCWWGESA++VASR KH FILLL+ R HL++ A+++PPI+LPVGMRPLFMQ QE G +P T V FLLVAG TSYLLYR SCTG + E+GN+T+ VLHEGPLPHV+GNM D+H P + T T P D P G GS D V AV G W + E+ ++G +LP IGPPKRVMLLPEVHPR++ALLD+DGN+VTM+ S+G V+ VA+GVESV+DL+ VSEAWEV PLLVHPCYLLR KGRVG G G G +G E +EFSVWCPAMRLDPCPPSV+RLLTPGR PSPVFSL+P SCDPE+VDLGLQPLLGTMV ASQ P L S PP RT + + + R L +A + + P+ L P RL SP T G AG + AV LG + A SE A V GD GS +D SG GG+S + ++ D A P +G+G P EG G GG +R W T + A+ ++ KRC+ G +++ TL+ LL T C+ + A D R + + V+ R RV +N D +GVS GG ASSSPG R +AV +LELARAVM+DSVYLAQLAPECFHEVVARVARK EPERY L+FPLH EE+ + S RA E NGER R GG G VG +G WGR VHPTHLFHECV++G+LTTAAW+LPL+RDDVAYDAA+RH GP+GPLSEEER R MP EMWA+TG+ W +GLSHALSCVLL ASLSSNQHAFLPEVWLFARKRE+SAP+H AG+ V + W+ GQGAAIEA ++ + G+ ++ G++ G G G T SPV +AL G THFGRTS LRLRALRR G ++ GDE T E QR E E RLY+LPLT+DAASVVSRFMW+ELNELRV V +AFQSL S AAREAGL+ G+VL+ L+PARRSMV SL SP+ET AGL+V+LAE
Sbjct: 46 SETMYFVYGCPKVLSLRPEPKPGEQILEVAFNPSGSLLAVASTSRLCLWSGGKDHVPLGTLTLPLRGLAGTSLLWKRDSSLLGIVSSAGKLVLVSVKRRAGARPASERFALPDWIEPQHARTAAENDGEERDAWADPVEADLAMVSTVESIGSEASAMCLGRFGQHVLLGTASGSIYGVSWEGQILCCYDIVPGPSPSPRVNSXXXXXSGGHLEQGETEPGTRRFGGQGASSMSFNDTLQLLALTATDGSFFLGKLSKTTCWLRNIAVADRSRATA----APPSAAAGRKPNSAAPPSFLANADGDNQEIGWGWRLLGTGRNAVAAAV---------------DALSSPRSNTDGVFFSGGDGXXXXXXXXXXXESGDTAGTGAVGVEFSAKGGLMAVALADGTVLLARVERYTSGVRARHKLQISNSMLHRSDSHRLEDYLADETLRAEQGLGDVSEGDGKGGVTSPPDAR---TRTFSREGTMSSLWGVEVHHLNCLSLDPWLGPGDGGGGGESLLGPAGRVLSLCFSADGGALAVGHEGALTVWSTEDGTRLVCTTTESRDDLDGYEGAAXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXEPPLSPSRAAR--------GTLDLIAGGARALSWEREGYRLMSVGSAVGAAAGVGGDAGAQGIVAFDFLRRARSNLSSSLLSLQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYVAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHKHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFMQAVQEGGSRPGTDVLFLLVAGSTSYLLYRLSCTGGVFEAGNLTYSVLHEGPLPHVLGNMEPDQHYTDPSPSSDPNPDEETPTEHRPIAADTAP-GAAXXXXXXXXXXXXXXXGGSRD----------------------------VKGGFAVGAGMGGWGQGEKRKARREGG-------DLPE-IGPPKRVMLLPEVHPRSIALLDFDGNMVTMEMSSGMVRRVAEGVESVVDLTGVSEAWEVWEMPLLVHPCYLLRRKGRVGXXXXXXXXXXRRWEQRPGDGDDGDEGSEEEGTEEFSVWCPAMRLDPCPPSVQRLLTPGRATGSGGGHGMTPSPVFSLDPGASCDPERVDLGLQPLLGTMVHASQGGGPSSLSSLPPSFYVRPRRTSAVALKNDLPRPLRVALSPENENHPNTLVPVDAEVLRLWKSPRTLVGGEALKRALQADADRQAGGKRGSGAVGLGSSTKSADRYGSGGWDGAASEAAAVGVGDEVSVEISPNTFDRNKRVVERHSQGMLVNGVSVERADLAPTPGLVMHGSGDDAPALWRLYTRAPYVVQNGLACDVVVWASQPLAEEGNATLDTVLESPGPASSGGGGLSASAGRSLKGRLSLKKLGLSPKRDSDGSARPRSSASSGSKFRFTPKSWKKGSGGAPFREGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDRLSAIGAASXXXXXXXXXXXXXXXXGPPNNGRVMWVLKSGEEAKLEGMDPTRHLRLRVGFAPADGSSSCSDFCKSYIIEAKRHTNRTLLNRMKSKEAVFSHGARGSGGARRPEFKFGAVWEHTPGNRHIHLYSKVWVLNKTGVSLAYRASIPTKEDDRKEKVFVRRPYNASYRTDGDTMLFSRYMTGAKRCKSFGGGDKTGGGGATASEIGGEAGFPLMLTCRANTLQTMPYAMADSAVGAALLLSETRSSKSEQPLPCLT-VPAADDAXXXXXXXXXXXAESSSWPLYCDYPPARVRLPEEVVSERRRRVHLLTLRSDTGSVTFTPSRDCRVYIGLDKRLLAADPGPPKWLALQGFERREGLDVSVTDVQPADLAPQGFGLYSRFCRGLSVVPLGQNLDHDGDGVSERRGGPAAMYFVVVVRVPESEAVGEVDIGPVAMHRSVGKIFDMREHHRWRMKPNFKPGDPCYTDRPSSENTVTGLPEKLRGLKLMAATAASSGEGGYDGDTERASSSPGGXRXKGPXXXXXXXSGPGEEGXXXXXXXXXXXRDWHGTSSDAFEIAVAVLKLELARAVMSDSVYLAQLAPECFHEVVARVARKAEPERYPLLFPLHLVRGAPDAEEETEKFFSVGXXXXXXXXXXXXXXXRAQSEEAV-NGERARAGGVG-----QVGRCVGPRWGRWVHPTHLFHECVSSGKLTTAAWYLPLIRDDVAYDAAQRHVGPNGPLSEEERSRLMPLEMWAVTGEGWPYGLSHALSCVLLLASLSSNQHAFLPEVWLFARKREQSAPHHXXXXXXXXXXXXXXXXXXSPAAGDGGAGVSDDRWWTMGQGAAIEALLTRDVSRRQVAGGAEAMLRRTSSDNRFRRGSVGGLGWAVGGTXWGSSAGGEAKGIPRSPVSRAALEGGRGTHFGRTSALRLRALRRPGRLGDADADSADDTGDESPFPTEGGEEXXXXXX-------XXXXXMXXQRPEVESTRLYHLPLTRDAASVVSRFMWKELNELRVKVVLRAFQSLACSTAAREAGLDAGQVLAALSPARRSMVGSLHGSPVETFAGLLVSLAE 2569
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: A0A6H5KDH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH8_9PHAE) HSP 1 Score: 552 bits (1422), Expect = 4.010e-167 Identity = 396/838 (47.26%), Postives = 470/838 (56.09%), Query Frame = 2
Query: 4028 QRDWHGTNSDAFEIAVAVLKRCREDGVLVEALPETLELLLRTCMEALHVAGDRAKAQAQAVAARSNRVRNPKVDVNGVSGNSGGASSSPGSPRLAVSELELARAVMTDSVYLAQLAPECFHEVVARVARKTEPERYGLMFPLHRT-----VEEDDQHGASTAATRAHLEGPQD-----------NGERRGGGAGCKTSGVVG--LGLSWGRLVHPTHLFHECVTAGRLTTAAWFLPLVRDDVAYDAARRHTGPDGPLSEEERRRYMPPEMWAMTGKDWSFGLSHALSCVLLSASLSSNQHAFLPEVWLFARKREKSAPYHHYHR---------GDPQRVGKAGEPDEAVFEPPWYRRGQGAAIEAAQA--------------AELKKSGSRS------IGAL----------AGAGVDPGETLVSPVPESALTCGEDTHFGRTSRLRLRALRRLSSGGGGSLKEEKGDEDRAGTGSHIEAVAPIADPGSRPQSSSPQPYSQRSEAERVRLYYLPLTKDAASVVSRFMWQELNELRVNTVTKAFQSLTSSPAAREAGLNPGEVLSTLTPARRSMVRSLPSSPMETMAGLMVALAEMFKVTVETLALLAAPAEELSRVDDNGAVDSAGSFSRRPVSTTGSRGGPSKGSEVSLAPGVVNEETPG---------APSSAPTTAQLKARATVAASVSPQLVLLGDLSRSVGHGEAALVCASLLRDEARAVETLSNASQALRVGYGRFVSDLADQLELAKKKRSARDSGGGEAGARRGARNGEQSPAAEKTTGNGLSSSSSSKLGRRCSGIGPAAVVAGMGAERGAMALVRLERFGGKCMRGLA 6343
QRDWHGT+SDAFEIAVAVLKRCRED VLVEALP+TLELLLR CME L +AG RAK + A++ A+ VSELELARAVM+DSVYLAQLAPECFHEVVARVARK EPERY L+FPLH EE++ S+ NGER G G G VG +G WGR VHPTHLFH+CV++G+LTTAAW+LPL+RDDVA+DAA+RH GP+GPLSEEER R MP EMWA+TG W +GLSHALSCVLL ASLSSNQHA LPEVWLFARKRE+SAP H HR G AG D W+ GQGAAIEA A A L+++ S + +G L + AG + SPV +AL G THFGRTS LRLRALRR G + D G S E RLY+LPLT+DAASVVSRFMW+ELNELRV V +AFQSL S AAREAGL+ G+VL+ L+PARRSMV SL SP+ET AGL+V+LAEMFKV+V TLA LAAPA + P+SA A+ +A + ++ASV PQL LLGDLSR+VGH EAALV ASLLRD A A L +ASQ LRVGYG F+++L +Q+++A+ +A + + + AAE+ G G + SS +G+ AA GA GAMALV L+RFGG C+R LA
Sbjct: 146 QRDWHGTSSDAFEIAVAVLKRCREDSVLVEALPDTLELLLRACMEGLSIAGARAKRSSSALSHNXXXXXXXXXXXXXXXXXXXXAT---------VSELELARAVMSDSVYLAQLAPECFHEVVARVARKAEPERYPLLFPLHLVCGAPDAEEEETEKVSSXXXXXXXXXXXXXXXRARSVEAVNGERAGAGG----VGQVGRCVGPRWGRWVHPTHLFHDCVSSGKLTTAAWYLPLIRDDVAFDAAQRHVGPNGPLSEEERSRLMPLEMWAVTGDGWPYGLSHALSCVLLLASLSSNQHALLPEVWLFARKREQSAP-HQRHRHXXXXXXXXXXXXXXGGAGVSDAR-----WWTMGQGAAIEALLARDKTRRQVAGGGAEAMLRRTSSDNRFRRGNVGGLGWAVGGTGWGSSAGGEAKGIPRSPVSRAALEGGRGTHFGRTSALRLRALRRPGRLG----DADANSADDTGDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESTRLYHLPLTRDAASVVSRFMWKELNELRVKVVLRAFQSLACSTAAREAGLDAGQVLAALSPARRSMVGSLHGSPVETFAGLLVSLAEMFKVSVGTLAQLAAPAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPTSA---ARQRALSALSASVRPQLELLGDLSRAVGHVEAALVSASLLRDMAGATAILGSASQPLRVGYGHFIANLLEQVKVART--TAXXXXXXXXXXQAPPKPADIRAAAERGVGAGQNPPGSSDRLNGDAGVPAAAAPVSGGAAAGAMALVGLQRFGGMCVRALA 955
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: A0A835YSR2_9STRA (RIC1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR2_9STRA) HSP 1 Score: 365 bits (937), Expect = 2.260e-99 Identity = 415/1500 (27.67%), Postives = 556/1500 (37.07%), Query Frame = 2
Query: 566 RFALPDWFEPQHTRVPTETDGG---ERDAWADPGEADMAVISTVEAIGSEASAMCLGRFGQHVLVGTESGAIYGVSWEGQIICCYDIVAVPGAPPRVGGGPGTGLPDDRMRSADLGAISSLSFNDTLQLLALTTEDGNFFMGALSKNSCWLRNIAVTERGQGSAKTEVVSTAAPAVTAPSDHEPKRDHSDLDAKQISRGWGWRLLGTGRHAVAAAATXXXXXXXXXXXXAPSSLSGRRNGPNGIIETSPPGAADAVAGAVCVEFSPKG-LMAVGIADGTVLLTRVERYTTGLRSRHKLHISNSMLHKSDSYRLE----------ANLANET-----DLEGVGMAGETDSK---DARPPPSPSLGREGSMSSLWGVEVHHLYCLSLSSLFGPGAPRGEALGSAGRVLSMCFSTDGCALAVGHERALTVWSTEDGTRLVCTTSKNSDTGDQGSGGFSKTVHPTAVATAAAXXSPSSGAAAKENGNVGARVAVAEQPPQSRHLAAQPSYRAASGGMLDLVAGGARALTWGSEGYRLVSVGAEVGGTGSV--------QGIVAFDFFRRARSNLASAVLALQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLAANAPLRHVSTSRAGTHVAVAGARGLAVYSRPTNRWRLFGNIHEEHEVEVAGMCWWGESAIMVASRVKHAFILLLYPRNHLTTKAMLLPPIKLPVGMRPLFMQGAQESGPKPSTKVFFLLVAGYTSYLLYRFSCTGALESGNVTFGVLHEGPLPHVVGNMGDRHPLGQRSISSVTATPPPPAKPDQIPLGGGASAAERSSKAARPGLDGSMDNDNDHRKCGHSQASSVVPSRPSTSSTGPVGSRVAVINGDSAWRRDERFFGGQQGSSPGCQPSELPAMIGPPKRVMLLPEVHPRTLALLDYDGNLVTMDTSNGEVKAVADGVESVIDLSEVSEAWEVGGSPLLVHPCYLLRTKGRVGGGGAGGGDGEMAQEFSVWCPAMRLD-PCPPSVRRLLTPGREPSPVFSLEPSTSCDPEQVDLGLQPLLGTMVLASQVVCPPR---------LLSTPP------LPPCYELRTHLRPVLHMVLRHLLIASQFQLLDSPSILSPSRPGANRLLGSPGTAGGAGEGDNAVAVALGGAAPGASEGAGVAPGDGSFNDGGSGDGGVSERSRGVVQADDSQAAPSRGTGDPPADEGPGGGRQRDWHGTNSDAFEIAVAVLKRCREDGVLVEALPETLELLLRTCMEALHVAGDRAKAQAQAVAARSNRVRNPKVDVNGVSGNSGGASSSPGSPRLAVSELELARAVMTDSVYLAQLAPECFHEVVARVARKTEPERYGLMFPLHRTVEEDDQHGASTAATRAHLEGPQDNGERRGGGAGCKTSGVVGLGLSWGRLVHPTHLFHECVTAGRLTTAAWFLPLVRDDVAYDAARRHTGPDGPLSEEERRRYMPPEMWAMTGKDWSFGLSHALSCVLLSASLSS-NQHAFLPEVWLFARKREKSA 4924
+FA+PDW E + V GG E D W +P E + V++ + Q VL + A + + + + GA G + S+SF DTLQLLAL T+DG F + LS +C +R IA +GS+ +P+S S N PP A A FS KG L+AV + DG+VLL+RVER+T+G R+ L + + + ++ +S+RL+ A LA T EG+G +G S P +P ++ +++L GVE+H L+ LSL GP +AG V +CFS DG ALAVGHE AL +WST+DGTRL C S TG G GG SGG GG R L WG GYRL++V G GS + I+ +D R A S ++ A L LQ S R+ ++++PW + L WRVLP H GYLA+NAPL+H E E+EV G+CWWGE A++ +R + L LYPR HL ++LL P++LPVGM+P F + + + +LVA SYL+YRFS T A VT V H+G LPHV Q + + AT TG G A RR R GS+ IG P+R+ L+P V P L +LD+DGNL ++ G + S A L L R R+ + ++E+ VWCPA++L+ P L G + + +L+P DPE + LGL G MV VC PR ++ PP LPPCYE+RT LRP+LH L+ S D P A + G F++A ++L + D L EA+P+TLELLLR C+E H+A + K A G A+ + A AV++ ++ L LA CF EVVARV+RK EP+ Y L+FPL GG G G G HPTHL H C+ GRL TAAWFLPLV D A AAR + P E +PP M +TG +WS GLSHAL C LL L + + HA LPEVWLFA KRE+SA
Sbjct: 2 QFAVPDWLETHYPGVHQPLAGGGKDEEDEWLNPVEVALQVLTRYRTV-------------QPVLSPLPAEAFFADEPAERHMHTHSAHVFRGAETLPSG------------------VRSVSFCDTLQLLALVTDDGQFSLCTLSGETCCVRTIATVATTEGSS--------------------------------------------------------------GGASPTSTSN-----NASARAEPPEVA-----AKLGLFSGKGGLLAVALGDGSVLLSRVERFTSGARAGDGLRVMSGLENRRNSFRLDPAERLDPADAAELAAATLDIAGGAEGLGGSGSFQSDVPGGGHAPDTPRSAQQRGIATLAGVEIHQLHSLSL----GPYL-------AAGGVTCLCFSDDGHALAVGHEGALALWSTDDGTRLSC-----SATGGAGVGG--------------------------------------------------------SGG------GGVRGLAWGYHGYRLLAVAGS--GMGSPLRGPPQQQERILVYDLLRHAGSAVSGAPLCLQDSTRVVTLEARPWDSHSLYWRVLPCHGGYLASNAPLQH------------------------------------ERELEVCGLCWWGEEAVIALARQGSMYWLRLYPRTHLDDASLLLAPLRLPVGMKPAFFSAMPVT--RRAGSEILVLVASQRSYLVYRFSQTPA----GVTSEVAHQGTLPHV-----------QPTHCTSAAT------------------------------------------------------------TGGSGXXXXXXXXXXAKRRQWRA-----GSAASALSLADEGRIGAPRRLFLVPAVVPPLLGILDFDGNLAVVELEGGCCR----------QRRSFSRA-----KALARQQRRLKREAARLI-------EEAYSEEYQVWCPALQLELPDGAFSEDSLDGGTDEA--LALDPHAYADPESMALGLLARKGAMV-----VCRPRDNAASAGSTAVNGPPPAEPLQLPPCYEMRTRLRPLLH------LLGSA----DPPPXXXXXXXXAGAVRG----------------------------------------------------------------------------------------------FDVAASILAELKRDAALAEAVPDTLELLLRACLEGRHLANEAQKGPA------------------------GDATRAQ------------AAAVLSGALRLCALARGCFLEVVARVSRKMEPDWYALLFPLLL------------------------------GGEG----GYEGA--------HPTHLLHACLEQGRLATAAWFLPLVSDH-AVSAARSRSAPP-----HELEALLPPPMLPLTGAEWSHGLSHALCCCLLLRCLEAPHTHALLPEVWLFACKRERSA 983
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: A0A6H5KCF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCF3_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.380e-45 Identity = 80/115 (69.57%), Postives = 94/115 (81.74%), Query Frame = 2
Query: 254 MYFAYGCPKVLCLRPDLIPGERILAVSFNPPGSLLAIASTSRVCIWSGGKDHFPLSALPVQLRGLPGKSLLWKRDSSVLAAVSSSGQLILLSVKPKPGARPASERFALPDWFEPQ 598
MYF YGCPKVL LRP+ GE+IL V+FNP GSL A+ASTSR+C+WSGGKDH PL L + LRGL SLLWKRDSS+L VSS+G+L+L+SVK + GARPASERFALP+W EPQ
Sbjct: 1 MYFVYGCPKVLSLRPEPKRGEQILEVAFNPSGSLFAVASTSRLCLWSGGKDHVPLGILTLPLRGLAATSLLWKRDSSLLGMVSSAGKLVLVSVKRRAGARPASERFALPEWIEPQ 115
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: A0A4D9CZK3_9STRA (RIC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZK3_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.710e-29 Identity = 143/537 (26.63%), Postives = 229/537 (42.64%), Query Frame = 2
Query: 2144 IVAFDFFRRAR-SNLASAVLALQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLAANAPLRHVSTSRAGTHVAVAGARGLAVYSRPTNRWRLFGNIHEEHEVEVAGMCWWGESAIMVASRV--KHAFILLLYPRNHLTTKAMLLPPIKLPVGMRPLFMQGAQESGPKPSTKVFFLLVAGYTSYLLYRFSCTGALESGNVTFGVLHEGPLPHVVGNMGDRHPLGQRSISSVTATPPPPAKPDQIPLGGGASAA---ERSSKAARPGLDGSMDNDNDHRK----CGHSQASSVVPSRPSTSSTGPVGSRVAVINGDSAWRRDERFFGGQQGSSPGCQPSELPAMIGPPKRVMLLPEVHPRTLALLDYDGNLVTMDTSNGEVKAVADGVESVIDLS-EVSEAWEVGGSPLLVHPCYLLRTKGRVGGGGAGGGDGEMAQEFSVWCPAMRLDPCPPSVRRLLTPGREPSPVFSLEPSTSCDPEQVDLGLQPLLGTMVLASQVVCPPRLLSTPP-------LPPCYELRTHLRPVLHMVLRHLL 3700
IV ++ R AR + A L LQG + +A ++ +PW+ ++L W + V P Y + N P+ V+ S +G +AVAG RGLA+YSRP RWRLFGN+H+E E+EVAGM WWGE A++V +++ + +L+Y R+HL ++L P+ LP G RPLF++ ++ ++ G + GV V +GD H L ++ D P G + + E S R G DG D+ + G + S V PS +++ + + NG++A +R++LLPEV P ++ALL L + + VA GV ++ +LS EA + PCY+L R FS+W P+ ++ L RE L+P+ + D E V +G+ +++ +Q P+ S +PP +++ RP + R LL
Sbjct: 498 IVRYEMLRWARHAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAY-SVNVPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDILVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFRSRSXXXXXXXXXXXXXXXXXXXGVD-GAILDGVYW---TDSAVLMVGDVHNLLFYRLAR-----------DHSPRGVSIALSGHLEIPSNEGR-GRDGEAAADDPNALHSDGIGVTAVSDVEPSSRASNGAHSIKPMQTLGNGETA------------------------------RRIVLLPEVSPLSVALLSSTDTLYQIQVQDAATFCVATGVSNLWELSLPTGEA--------SMRPCYVLYCGDRG---------------FSLWLPSF-------CHKKALQLTREACQEPFLDPTFNPDVEGVIMGIHGPTSSLIFLTQSCTQPQSSSEHSSSADRVDIPPRFQVGLQRRPCYQVAFRFLL 957
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: A0A4D9B3L1_SALSN (RIC1 domain-containing protein n=2 Tax=Salvia TaxID=21880 RepID=A0A4D9B3L1_SALSN) HSP 1 Score: 90.5 bits (223), Expect = 3.910e-14 Identity = 62/197 (31.47%), Postives = 100/197 (50.76%), Query Frame = 2
Query: 2048 VAGGARALTWGSEGYRLVSVGAEVGGTGSVQGIVAFDF----FRRARSNLASAVLALQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLAANAPLRHVSTSRAGTHVAVAGARGLAVYSRPTNRWRLFGNIHEEHEVEVAGMCWWGESAIMVASRVK--HAFILLLYPRNHLTTKAMLLPPIKLPVGMRPLFMQGAQE 2620
+ GG + W GYRL ++ GS + I+AF F R S + G DR+ +V S+ +L LPV Y+ N P+ HV+ S+ G ++AVAG GL +Y RWR+FG+I +E +++ G+ W G+ ++V + V+ + + LL YPR HL ++L + P+ P+ M Q+
Sbjct: 359 IMGGTSLMHWDEHGYRLYAME-----EGSSERIIAFSFGKCCLNRGVSGTTYVCQVIYGEDRLLIVQSEDTDELKILHLNLPV--SYILQNWPILHVAASKDGMYLAVAGLHGLILYDIRLKRWRVFGDITQEQQIQCRGLLWLGK-IVVVCNYVESSNTYELLFYPRYHLDQSSLL---CRKPLLTNPMVMDVYQD 544
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: A0A2I4FZZ2_JUGRE (guanine nucleotide exchange factor subunit RIC1-like isoform X6 n=1 Tax=Juglans regia TaxID=51240 RepID=A0A2I4FZZ2_JUGRE) HSP 1 Score: 90.1 bits (222), Expect = 4.460e-14 Identity = 62/195 (31.79%), Postives = 102/195 (52.31%), Query Frame = 2
Query: 2054 GGARALTWGSEGYRLVSVGAEVGGTGSVQGIVAFDF----FRRARSNLASAVLALQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLAANAPLRHVSTSRAGTHVAVAGARGLAVYSRPTNRWRLFGNIHEEHEVEVAGMCWWGESAIMVASRV--KHAFILLLYPRNHLTTKAMLLPPIKLPVGMRPLFMQGAQE 2620
GG + W GYRL ++ GS + IVAF F R S + G+DR+ +V S+ +L LPV Y++ N P++HV+ S+ G +AVAG GL ++ +WR+FG+I +EH+++ G+ W G+ ++V + + + + LL YPR HL ++L + P+ +P+ M QE
Sbjct: 371 GGTSLIEWDEYGYRLYTIE-----EGSPERIVAFSFGKCCLNRGVSGTTYVRQVIYGADRLLVVQSEDTDELKMLHLNLPV--SYMSQNWPVQHVAASKDGMFLAVAGLHGLILHDIRAKKWRVFGDITQEHKIQCKGLLWLGK-IVVVCNYIDSSNMYELLFYPRYHLDQSSLL---GRKPLLAKPMVMDVYQE 554
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: A0A6I9U1Q9_SESIN (RAB6A-GEF complex partner protein 1 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9U1Q9_SESIN) HSP 1 Score: 90.1 bits (222), Expect = 5.140e-14 Identity = 63/195 (32.31%), Postives = 98/195 (50.26%), Query Frame = 2
Query: 2054 GGARALTWGSEGYRLVSVGAEVGGTGSVQGIVAFDF----FRRARSNLASAVLALQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLAANAPLRHVSTSRAGTHVAVAGARGLAVYSRPTNRWRLFGNIHEEHEVEVAGMCWWGESAIMVASRVKHA--FILLLYPRNHLTTKAMLLPPIKLPVGMRPLFMQGAQE 2620
GG + W GYRL ++ GS IVAF F R S + G DR+ +V S+ +L LPV Y+ N P+ HV+ SR G ++AVAG GL +Y RWR+FG++ +E +++ G+ W G+ ++V + V + + LL YPR HL ++L + P+ +P+ M Q+
Sbjct: 374 GGTSMMHWDEHGYRLYAIE-----EGSSDRIVAFSFGKCCLNRGVSGTTYVRQVIYGEDRLLIVQSEDTDELKILHLNLPV--SYILQNWPVLHVAASRDGMYLAVAGVNGLILYDIRLKRWRVFGDVSQEQQIQCRGLLWLGK-IVVVCNYVDSSDTYELLFYPRYHLDQSSLL---CRKPLLSKPVVMDVYQD 557
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: A0A2I4FZY4_JUGRE (guanine nucleotide exchange factor subunit RIC1-like isoform X2 n=7 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4FZY4_JUGRE) HSP 1 Score: 90.1 bits (222), Expect = 5.200e-14 Identity = 62/195 (31.79%), Postives = 102/195 (52.31%), Query Frame = 2
Query: 2054 GGARALTWGSEGYRLVSVGAEVGGTGSVQGIVAFDF----FRRARSNLASAVLALQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLAANAPLRHVSTSRAGTHVAVAGARGLAVYSRPTNRWRLFGNIHEEHEVEVAGMCWWGESAIMVASRV--KHAFILLLYPRNHLTTKAMLLPPIKLPVGMRPLFMQGAQE 2620
GG + W GYRL ++ GS + IVAF F R S + G+DR+ +V S+ +L LPV Y++ N P++HV+ S+ G +AVAG GL ++ +WR+FG+I +EH+++ G+ W G+ ++V + + + + LL YPR HL ++L + P+ +P+ M QE
Sbjct: 371 GGTSLIEWDEYGYRLYTIE-----EGSPERIVAFSFGKCCLNRGVSGTTYVRQVIYGADRLLVVQSEDTDELKMLHLNLPV--SYMSQNWPVQHVAASKDGMFLAVAGLHGLILHDIRAKKWRVFGDITQEHKIQCKGLLWLGK-IVVVCNYIDSSNMYELLFYPRYHLDQSSLL---GRKPLLAKPMVMDVYQE 554
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Match: UPI000C1CCCA5 (RAB6A-GEF complex partner protein 1-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CCCA5) HSP 1 Score: 89.4 bits (220), Expect = 8.550e-14 Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 2
Query: 2054 GGARALTWGSEGYRLVSVGAEVGGTGSVQGIVAFDF----FRRARSNLASAVLALQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLAANAPLRHVSTSRAGTHVAVAGARGLAVYSRPTNRWRLFGNIHEEHEVEVAGMCWWGESAIMVASRV--KHAFILLLYPRNHLTTKAML 2560
GG + W GYRL ++ GS + I+AF F R S + G DR+ LV S+ +L LPV Y++ N P+ HV+ S+ G ++AVAG GL +Y RWR+FG++ +E +++ G+ W G+ ++V + + + + LL YPR HL ++L
Sbjct: 313 GGTSLMHWDEYGYRLYAIE-----EGSSERIIAFSFGKCCLNRGISGTTYTCQVIYGEDRLLLVQSEDTDELKILHLNLPV--SYISQNWPVLHVAASKDGMYLAVAGLHGLILYDIRLKRWRVFGDVTQEQQIQCRGLLWLGK-IVVVCNYIDSSNTYELLFYPRYHLDQNSLL 479 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig92.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig92.39.1 >prot_A-nodosum_M_contig92.39.1 ID=prot_A-nodosum_M_contig92.39.1|Name=mRNA_A-nodosum_M_contig92.39.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=2041bp MYFAYGCPKVLCLRPDLIPGERILAVSFNPPGSLLAIASTSRVCIWSGGKback to top mRNA from alignment at A-nodosum_M_contig92:532402..574459+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig92.39.1 ID=mRNA_A-nodosum_M_contig92.39.1|Name=mRNA_A-nodosum_M_contig92.39.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=42058bp|location=Sequence derived from alignment at A-nodosum_M_contig92:532402..574459+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig92:532402..574459+ >mRNA_A-nodosum_M_contig92.39.1 ID=mRNA_A-nodosum_M_contig92.39.1|Name=mRNA_A-nodosum_M_contig92.39.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=6123bp|location=Sequence derived from alignment at A-nodosum_M_contig92:532402..574459+ (Ascophyllum nodosum dioecious)back to top |