mRNA_A-nodosum_M_contig910.5.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig910.5.1
Unique NamemRNA_A-nodosum_M_contig910.5.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5KU45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU45_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.930e-30
Identity = 89/252 (35.32%), Postives = 137/252 (54.37%), Query Frame = 2
Query: 2591 KKDGEPGGNEEFPKYCALVGSLMWLSVMTRPDIANELRACAYHSHDPSPRHWKALLQVAAYVNAT---KEIDLRLVRCSGLRLSVYAGADYATASNDRRSV-SLMWLSVMTRPDIANELRACARHSHNPSPRHWKALLQVAAYVNTTKEIGLKFVRGFGLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAI 3334
            K++ E GG  E+P   A +GS+MW+S  +RPD++  +RA A H+H P+ RHW A+ +   Y+      K  D               G ++      R ++ S+MW+   + PD++  +RA ARH+H P+ RHW A+ +   Y+  T+++G+ + RG GL L+ Y  A YA  + DRRSVSG+A  +G T +      Q  V+ ++ EAEY+A     KEALF  AVL F+ PE     +    D+ A + I
Sbjct:  484 KREDEEGG--EWPVREA-IGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKNLGYLKXXXWPKREDEE-------------GGEWPV----REAIGSMMWVLAFSCPDVSFAVRAVARHAHAPAKRHWDAIQKNLGYLKETRDLGITYQRGSGLGLAVYVHASYAD-TEDRRSVSGLATTVGGTVVSHGYKTQSIVSLSSTEAEYIAAGEGVKEALFVCAVLSFVAPETRGSSIQEMADSVAGENI 714          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5L3H1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H1_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.970e-27
Identity = 91/248 (36.69%), Postives = 128/248 (51.61%), Query Frame = 2
Query: 2591 KKDGEPGGNEEFPKYCALVGSLMWLSVMTRPDIANELRACAYHSHDPSPRHWKALLQVAAYVNATKEIDLRLVRCSGLRLSVYAGADYATASNDRRSVSLMWLSVMTRPDIANELRACARHSHNPSPRHWKALLQVAAYVNTTKEIGLKFVRGFGLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAI 3334
            K+D EP    + P   AL G LMW+ V TRPDIA  L      +H P+ R W+ALL+V +++NATK++ L  VR SGL L V+  A YA    DR         ++  PDIA  L    + +H+P+ R W+ALL+V +++N TK++ L +VRG GL L  + DA YA    DR                                +Y+A     KEAL  RAVL F+ PE S +++ +  DN+ A A+
Sbjct:  506 KRDDEP--TVDKPVREAL-GCLMWV-VHTRPDIALPLNKVQKVAHSPTDRIWQALLRVMSHLNATKDLSLTYVRGSGLDLGVWVDASYADDVVDR---------LILXPDIALPLNKVQKVAHSPTDRIWQALLRVMSHLNATKDLSLTYVRGSGLDLGVWVDASYADDVVDR--------------------------------QYLAAGERVKEALHVRAVLSFVAPETSGVKIQVLEDNKGALAL 708          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.040e-27
Identity = 76/199 (38.19%), Postives = 114/199 (57.29%), Query Frame = 2
Query: 2774 VNATKEIDLRLVRC---SGLRLSVYAGADYATASND--------RRSV-SLMWLSVMTRPDIANELRACARHSHNPSPRHWKALLQVAAYVNTTKEIGLKFVRGFGLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAI 3334
            ++ T  ID  + R    S  R+    GAD      D        R ++ S+MW+S  +RPD++  +RA ARH+H P+ RHW A+ ++  Y+  T+++G+ + RG GL L+ Y DA YA  + DRRSVSG+A  +G T +   S  Q  V+ ++ EAEY+A     KEALF RAVL+F+ PE     + +  DN+ A A+
Sbjct:  495 ISQTAYIDSMVARFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSMEAEYIAAGEGVKEALFVRAVLLFVAPETRGSSIQVLEDNQGAMAL 692          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5JRE9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE9_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 8.040e-27
Identity = 95/289 (32.87%), Postives = 143/289 (49.48%), Query Frame = 2
Query: 2591 KKDGEPGGNEEFPKYCALVGSLMWLSVMTRPDIANELRACAYHSHDPSPRHWKALLQVAAYVNATKEIDLRLVRCSGLRLSVYAGADYATASNDRRSVSLMWLSV---------MTRPDIA---NELRACARHSHNPSPRHWKALLQVAA-----------------------------YVNTTKEIGLKFVRGFGLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAI 3334
            K++ E GG  E+P   A +GS+MW+S  +RPD++  +RA   H+H P+ RHW A+ ++  Y+  T+++ +   R SGL L+VY  A YA  + DRRSVS +  +V          T+  ++    E    A           +A+L   A                             Y   T+++G+ + RG GL L+ Y DA YA  + D+RSVS +A  +G T +   S  Q  V+ ++ EAEY A     KEALF RAVL F+ PE S   + +  DN+ A A+
Sbjct:  953 KREDEEGG--EWPVREA-IGSMMWVSTFSRPDVSFAVRAVVRHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPEASGSSIQVLEDNQGAVALVQNALSSXGYQKETRDLGITYQRGSGLGLAVYVDARYAD-TEDKRSVSEMATTVGGTVVSHGSKTQSIVSLSSTEAEYFAAGEGVKEALFVRAVLSFVAPEASGSSIQVLEDNQGAVAL 1236          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.830e-26
Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2
Query: 2885 SLMWLSVMTRPDIANELRACARHSHNPSPRHWKALLQVAAYVNTTKEIGLKFVRGF--GLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAIA 3337
            SL+W++++TRPDIAN +RA AR+   P   HW+A L +  Y   T   G+ F RG   G  L  +ADADYA+ + DRRSVSG  V+    AI W S  QKCVT +T +AEYVA+    KE LF R V  F+ P+     + ++ DNE A  IA
Sbjct:  169 SLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIA 321          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5KXX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX2_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 7.020e-26
Identity = 62/150 (41.33%), Postives = 93/150 (62.00%), Query Frame = 2
Query: 2885 SLMWLSVMTRPDIANELRACARHSHNPSPRHWKALLQVAAYVNTTKEIGLKFVRGFGLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAI 3334
            S+MW+S  +RPD++  +RA ARH+H PS RHW A+ ++  Y+  T+++G+ + +G GL+L+ Y +A YA  + D+ SVSG+A   G       S  Q  VT ++ EAEY+A     KEALF RA L F+ PE S   + +  DN+ A A+
Sbjct:   41 SMMWVSTFSRPDVSFAVRAVARHAHAPSKRHWDAIQKILGYLQGTRDLGITYQQGSGLRLAVYVNASYAD-TEDKHSVSGLATTGGG------SKTQSIVTLSSTEAEYIAAGEGVKEALFVRAALSFVAPETSGSNIQVLEDNQGAIAV 183          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5KVP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP5_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.010e-25
Identity = 74/199 (37.19%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 1723 RKIQDLPPPPTTQEEVRRSPFRKAFEHSQKLELNRMLDVGCFKVVDEKDVPKGRKVVRSQWVHTCKGDGHENCLKTNPEW----------LRGFTQAHDVDYHETTSPTPASAPVKMIAAIANEKGLPAFHLDLSQAFV*APLEEEINMRFPSGCGELSDKVMKLLKCQYGLKQAGREWHLLLVTWLVEKS-EWSSAKP 2286
            ++  D+ PPP T   V +S +R+ +E + + E    L    F  +D    PK R+ V S+W           C KTN E            RGF+Q  +VDY  ++SP P+SA +K++ A+ANEKG+   H D+ QA+  A L+EEI +R P+GCGE S K+++  +  YGLKQ+GR+W       LVE   E   A P
Sbjct:   69 KRPSDVEPPPMTVAGVAKSVYREGWEQAMREEFKGHLGTRTFSFID--GAPKERRPVSSKWCF---------CWKTNKEGKIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLHHWDVKQAYTHATLDEEIFLRLPAGCGEKSHKIVQAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADP 256          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5JRZ9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ9_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.510e-25
Identity = 69/153 (45.10%), Postives = 91/153 (59.48%), Query Frame = 2
Query: 2885 SLMWLSVMTRPDIANELRACARHSHNPSPRHWKALLQVAAYVNTTKEIGLKFVRGF--GLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAIA 3337
            SL+W++++TRPDIAN +RA AR+S  P   HWKA L +  Y   T   G+ F  G   G  L  + +ADYA+ + DRRSVSG  V+    AI W S  QKCVT +T +AEYVA+    KE LF R V  F+ P+     + ++ DNE A  IA
Sbjct:  221 SLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGISFQSGTVSGFSLITFVNADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIA 373          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5KG67_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG67_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 4.200e-25
Identity = 71/153 (46.41%), Postives = 92/153 (60.13%), Query Frame = 2
Query: 2885 SLMWLSVMTRPDIANELRACARHSHNPSPRHWKALLQVAAYVNTTKEIGLKFVRGF--GLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAIA 3337
            SL+W++++TRPDIAN +RA AR+S  P   HWKA L +  Y   T   G+ F RG   G  L  + DADYA+ + DRRSVSG  V+    AI W S AQKCVT +T  AE+VA+    KE LF R V  F+ P+     + ++ DNE A  IA
Sbjct:  223 SLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGICFQRGTVSGFTLITFVDADYASRAADRRSVSGGVVMCAGGAIAWFSKAQKCVTLSTTPAEFVAVADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIA 375          
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Match: A0A6H5JR13_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR13_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 5.690e-25
Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2
Query: 2885 SLMWLSVMTRPDIANELRACARHSHNPSPRHWKALLQVAAYVNTTKEIGLKFVRGF--GLKLSAYADADYAAASNDRRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRAVLVFLQPELSDMRVDIFGDNEAAKAIA 3337
            SL+W++++TRPDIAN +RA AR+   P   HW+A L +  Y   T   G+ F RG   G  L  +ADADYA+ + DRRSVSG  V+    AI W S  QKCVT +T +AEYVA+    KE LF R V  F+ P+     + ++ DNE A  IA
Sbjct:  473 SLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIA 625          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig910.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU45_9PHAE3.930e-3035.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3H1_9PHAE1.970e-2736.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K274_9PHAE2.040e-2738.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE9_9PHAE8.040e-2732.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWK8_9PHAE1.830e-2645.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KXX2_9PHAE7.020e-2641.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVP5_9PHAE1.010e-2537.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRZ9_9PHAE2.510e-2545.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KG67_9PHAE4.200e-2546.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JR13_9PHAE5.690e-2545.75Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig910contigA-nodosum_M_contig910:53815..58038 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog164328.Phyra87153
PFAMsRVT_2,rve
Model size3475
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.96e-23
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QHHJ@4776|Peronosporales
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size687
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870363.229213-UTR-A-nodosum_M_contig910:53814..551061680870363.229213-UTR-A-nodosum_M_contig910:53814..55106Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig910 53815..55106 +
1680870363.2433887-UTR-A-nodosum_M_contig910:55855..572191680870363.2433887-UTR-A-nodosum_M_contig910:55855..57219Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig910 55856..57219 +
1680870363.267894-UTR-A-nodosum_M_contig910:57906..580381680870363.267894-UTR-A-nodosum_M_contig910:57906..58038Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig910 57907..58038 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870363.2554467-CDS-A-nodosum_M_contig910:57219..579061680870363.2554467-CDS-A-nodosum_M_contig910:57219..57906Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 57220..57906 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig910.5.1prot_A-nodosum_M_contig910.5.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig910 57220..57906 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig910.5.1

>prot_A-nodosum_M_contig910.5.1 ID=prot_A-nodosum_M_contig910.5.1|Name=mRNA_A-nodosum_M_contig910.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=229bp
MWLSVMTRPDIANELRACAYHSHDPSPRHWKALLQVAAYVNATKEIDLRL
VRCSGLRLSVYAGADYATASNDRRSVSLMWLSVMTRPDIANELRACARHS
HNPSPRHWKALLQVAAYVNTTKEIGLKFVRGFGLKLSAYADADYAAASND
RRSVSGVAVVLGDTAIDWKSSAQKCVTTTTCEAEYVALCVASKEALFTRA
VLVFLQPELSDMRVDIFGDNEAAKAIAY*
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mRNA from alignment at A-nodosum_M_contig910:53815..58038+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig910.5.1 ID=mRNA_A-nodosum_M_contig910.5.1|Name=mRNA_A-nodosum_M_contig910.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4224bp|location=Sequence derived from alignment at A-nodosum_M_contig910:53815..58038+ (Ascophyllum nodosum dioecious)
GAGATGGCTGCCCAGCTTTCTCGGCAAAAAATTCCAATGGCCCCTGACCA AGCTCTCCTCCAATGACTGTCCATTTTGCCCGATTCGGAGTACGAGGTGG AAAAACGTTCGTACAGCACTGGACAGCGACTAGATCGGGATCAGGCCCTG CTGATGATCCGTACGAGGTACGATAATCTCCAACGTTAGCGAAATAAGGG GGGTAGACGAAGGGATGCTGGTCACGCTTTTTTTGCCGATGCTGGAAGTT CCGGAACGACTGGGAGCCGTAGTACCCCGCGAGACGCTAAAAATCGTGGG GGTCGGGGCAGAGGTGGGCGTGGGAGCCAGAGTGGAAACGGAGGAGAAAA AGGTGGCCAAAAAAGGGAGGCCAAACCACCAACAGCAACGCTAGCGACGG AAACGTCGATGGTGGAAAGGGAGGCAAACCAAGATGCAACCGTTGTGGTG AGGTCGGCCACAAAACGGTGCGATGCCCCGGACAAGTGTGTAGCGTTAGC GGCGGAAAGGGCTATTCGGCTAAAATATGCGCCAACGTCGTCCCCGTCTA TGCCTGCGAAGCTGACGCGAGTGGCAGCGACAGTGACGGGGTTCTCAGCG GAGAAGAGCGAGATGCCTTGGTCTGCGATGCACTAGGCAATGTTCTCGAC TAGCCCGGTGAAAGAGGTAGAAATGCGCTCGCTTGGCAGATGGGGAATCT CCCGGTAATTTGTGACAATGGAGCATTATACTACATGTCACATTCATCTA CCGGTGTGATGAATTACCGTTAAGCTAATGCTACCATGCGTACGGCAAGC GGTAAAAGATACCCGATCGAGGGGTACGGTGACCTCCCCTTACTTTTCGA TCTAGCAGTGGTGAAGTTTCTCTGCTGCTCCGCGACGTTACACATGTATC CAGCCTCAGCTACCATCTTCTTTCCCTGAGAGTTGCAACCGACAACGGGC ATACGTACACCGGAAATAAAAACAGTGTAACAGTAAAGTTTTAAATCGGT GCAACTCTACTTTTCCCGTCAGTTGAGAGGCTGAACTTTCTGTGTACATA TCGCCCCGGTGCACTTAATGATGAGAATGCCAGTGCTGTAATTGCGCCCA GACCTGAGCCCAGTAACCGGGTACCCCAGTTGACATCAACGCCTTCCATG CCCCTCACGCCCATGCCCACGAGGGAGCCCTGCGAAAGACGGCCAAGCAG ATGGACGTCGCGCTCGAGGGAGAGCTGCACGAATGCAAGGGCTGTTCAAT GGCGAAGCGCATCAGGATGCCAATTCCCTCGAAGACACACGGGCGAGCAG CTAATAGATTGTTTCGCGTTTTTGTGGATCTAGGAGGGAATAAACATGTG GCGTCTATGGGGGGTAACAAGTATCCGATGATAGTGAGGGATGGTTTCTC GCGCCACGCCTGGGTGTACTTCGTTTCCCACAAATATGATGCAGCAAGTG CTTTTGAGAAATTCCTAGCCGATCTAAGAGTAGAAGGCACTCCGTCTGAA GTTGTGATAGTGAGATCGGACGATGGAGGAGAATTCATGGAAGGGAAATT CGGAAAACTCTGTCGAAAAATAAAAATAAAACAAGAAATCACAACTGCAG ACAACCCGGAGTACAACGGAGTAGCGGAGCCGGGGTTGGCAATGATAGAG TCCGCAGCATTAGCCGCTAGAATTCGGGCGTCAGAGTTGTTCCAGGTTGC AGTATTCCCGAGGGACCATCATTCTGGGCAAAAGCGATGAACTGGGCTTG CGGTGCGTACAACCGAACTGCGACGGTAGCGAATTCAGGCAATCGCTCTC CGCAAGAGATATTCTACGGAGAAACCCCACAGTCGAGCCCGATATCTTTC CTGAAACCGGGATTCTGCAAGTTCAAACGTACAAATAAGATAGACCCTAA GGCAAGGGAATATTTATATCTAGGCCCCGCCAGAAATCGCCTCAGTGAGA GTAAGCACGTGTTGGTACGGAAAGAAAAAGTGAACATAACAAGAAACGTT ACCTGGGCCCATGTCCCCTTTCCACGTCCTCCAACCGTAAGGTCTACGCT CTCGGTGGAAAGGGAGGGCTGTGACCACGGAATGAACCAAGAAGCAAGCT CGTTCGGCGGTGACACTGAATCGGGGGATGACGAGTCTGAGTCAAGTGGT GAGGGGGTCGAGATGGGGACCCCGCTCATTTCGGGGAGAGCTGCATCAAC TACTTCGCACGCCGGAAGCAGCGTACACAGCGGGGTTTCTGCACTACGCA CCGGGGGAGCAAAAAGACTTGCCGAGCACATCCCCGGACCGCTACGCGCG ACTATTTCAAAAGGACGTACGCGTGCTGAAGAGAGACGGTAGAAAAACAC TGCCCAAACAAGCCTGGTATCTGTGGAGGACGCGCTAGATATCACGCTGC ACGTCGAGGAGGAGAATACCTTGGAACAAGCGCTGCAGGTGGACATTGAG GCGTCAGTCGAGACGCCAACAAGGAAAATACAAGACCTCCCGCCACCGCC AACGACGCAGGAGGAAGTGCGTCGATCACCATTTCGTAAGGCGTTTGAGC ACTCTCAGAAGCTTGAGCTCAATAGAATGCTTGATGTGGGGTGTTTTAAA GTTGTGGACGAGAAAGATGTGCCAAAAGGTCGGAAAGTTGTCAGGTCTCA ATGGGTGCACACGTGCAAGGGCGATGGGCATGAAAATTGCTTGAAAACAA ATCCAGAGTGGTTACGAGGATTCACTCAAGCCCATGATGTAGACTATCAC GAGACAACGTCCCCCACGCCCGCATCAGCGCCCGTGAAAATGATAGCTGC GATTGCGAACGAGAAAGGTTTGCCCGCTTTTCACCTTGACTTGTCTCAGG CGTTCGTGTAGGCGCCCCTTGAGGAGGAAATTAATATGCGCTTCCCTTCC GGTTGTGGTGAACTCTCTGATAAAGTCATGAAGCTCCTCAAGTGCCAGTA CGGCCTTAAGCAAGCCGGCAGGGAGTGGCATTTGCTCCTAGTAACGTGGC TAGTCGAAAAATCGGAGTGGAGCAGTGCAAAGCCGAACCGTGTGTTTTTC GTAAGATAATCAAAAACGGGGTGTCAGTGATGGTCAGAGTTCATGTAGAT TATATCATAGTGTCTGGAGAACGGGATATGTGTGACGAGTTCTTTGGCCA GCTGAAGCAACGTTTCCCGGCGAAAACCTTGAGGGGACTCAAGATGTATA CTGGTTGCGTCTTCGAGCGTGACTGGGACAACGGAATCCTTGAGATGAAC CAGACGGCATTCACGAAAAATATGGTGGAACAGTACAACATTTTCGCAAC CTCGAACATTCCGGGGAGTCCACGTGTAGATCTTGGGCCAAGAAAGATGG CGAGCCCGGGGGTAATGAGGAATTTCCGAAGTATTGCGCTTTGGTTGGGA GTCTCATGTGGTTATCAGTCATGACTAGACCTGATATCGCGAATGAACTT CGCGCCTGCGCATATCATAGCCATGACCCTAGTCCGCGCCACTGGAAGGC GCTTTTGCAGGTAGCTGCGTATGTAAATGCGACGAAAGAAATCGATTTGA GGCTCGTCCGCTGTTCTGGTTTGAGACTGTCTGTGTACGCAGGTGCTGAT TACGCGACGGCGTCTAACGATCGAAGGTCCGTGAGTCTCATGTGGTTGTC AGTCATGACTAGGCCCGATATCGCGAACGAACTTCGCGCCTGCGCACGTC ATAGCCATAACCCTAGTCCGCGCCACTGGAAGGCGCTTTTGCAGGTAGCT GCGTATGTGAATACGACGAAAGAAATCGGTTTGAAGTTCGTCCGGGGTTT TGGTTTGAAACTGTCTGCGTACGCAGATGCTGATTACGCCGCGGCGTCTA ACGATCGAAGGTCCGTGTCAGGTGTAGCAGTAGTGTTGGGTGACACAGCC ATTGACTGGAAGAGTAGTGCGCAGAAATGTGTGACCACGACAACTTGTGA AGCAGAGTATGTTGCCCTATGCGTTGCGTCTAAGGAAGCGTTATTCACAA GAGCGGTTTTGGTGTTCCTCCAGCCGGAGCTGAGTGACATGCGAGTAGAT ATTTTTGGCGATAACGAGGCCGCAAAGGCGATTGCGTATTGACTCATAGT GTCTTTCAGCGTAGCAGCGTGGGCTGGCGTTGTTGATTCATTGTGTCTTA AGCGTGCAGTATGGGCTGGCGTTGTTGACTCCTTGTGTCTCTAGTCGGTA TATTAGTCGTTTGAGTCTTAAAGG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig910:53815..58038+

>mRNA_A-nodosum_M_contig910.5.1 ID=mRNA_A-nodosum_M_contig910.5.1|Name=mRNA_A-nodosum_M_contig910.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=687bp|location=Sequence derived from alignment at A-nodosum_M_contig910:53815..58038+ (Ascophyllum nodosum dioecious)
ATGTGGTTATCAGTCATGACTAGACCTGATATCGCGAATGAACTTCGCGC
CTGCGCATATCATAGCCATGACCCTAGTCCGCGCCACTGGAAGGCGCTTT
TGCAGGTAGCTGCGTATGTAAATGCGACGAAAGAAATCGATTTGAGGCTC
GTCCGCTGTTCTGGTTTGAGACTGTCTGTGTACGCAGGTGCTGATTACGC
GACGGCGTCTAACGATCGAAGGTCCGTGAGTCTCATGTGGTTGTCAGTCA
TGACTAGGCCCGATATCGCGAACGAACTTCGCGCCTGCGCACGTCATAGC
CATAACCCTAGTCCGCGCCACTGGAAGGCGCTTTTGCAGGTAGCTGCGTA
TGTGAATACGACGAAAGAAATCGGTTTGAAGTTCGTCCGGGGTTTTGGTT
TGAAACTGTCTGCGTACGCAGATGCTGATTACGCCGCGGCGTCTAACGAT
CGAAGGTCCGTGTCAGGTGTAGCAGTAGTGTTGGGTGACACAGCCATTGA
CTGGAAGAGTAGTGCGCAGAAATGTGTGACCACGACAACTTGTGAAGCAG
AGTATGTTGCCCTATGCGTTGCGTCTAAGGAAGCGTTATTCACAAGAGCG
GTTTTGGTGTTCCTCCAGCCGGAGCTGAGTGACATGCGAGTAGATATTTT
TGGCGATAACGAGGCCGCAAAGGCGATTGCGTATTGA
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