mRNA_A-nodosum_M_contig9087.9.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE) HSP 1 Score: 196 bits (498), Expect = 6.510e-57 Identity = 110/177 (62.15%), Postives = 121/177 (68.36%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSPPFLACVPPAWGEHSLTVFCEARNLSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKRQPAQSAADT-LHLDSAGGASSMC 531
QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKM+S RTLKEWINELQAQGPQDIAIA+AGNKRDLES QR ES +A+AYA+EIGAMFVETSAK T VQD+FVELSKRLPKR+P A+ L+LDS+G +SS C
Sbjct: 65 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLES-----------------------------------------QREVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 200
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: A0A7S2FT41_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT41_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.010e-38 Identity = 82/177 (46.33%), Postives = 106/177 (59.89%), Query Frame = 1
Query: 7 IWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSPPFLACVPPAWGEHSLTVFCEARNLSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKRQPAQSAADTLHLDS--AGGASSMC 531
IWDTAGQEKYHSLAPMYY+GA AAIVVYDITK N+ +TL++WI ELQ QGP+ I IA+AGNK DL CE + + R ++ A AYA EIGA F+ETSAKT + V ++F ++S+ LP +P Q+ +TL L + + G+SS C
Sbjct: 1 IWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKRNTFKTLQDWIRELQEQGPEGIVIAVAGNKSDL-------------------------CEGE----------ANAHLREVQTAEAEAYAAEIGASFLETSAKTKSNVNEIFEQISRSLPAYEPPQNYQNTLKLQAGKSHGSSSCC 142
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: A0A812YTF7_SYMMI (Rab31 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YTF7_SYMMI) HSP 1 Score: 144 bits (363), Expect = 3.910e-38 Identity = 77/147 (52.38%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSPPFLACVPPAWGEHSLTVFCEARNLSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVEL 444
QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT+ N+ +TLK W++EL+AQGPQ+IAIA+AGNK DLE +QR ES A AYA+EIGAM++ETSAK D V D+FV+L
Sbjct: 15 QIWDTAGQEKYHSLAPMYYRGAAAAIIVYDITRANTFKTLKNWVDELKAQGPQEIAIAVAGNKADLE-----------------------------------------DQREIESSAAAAYAQEIGAMYLETSAKDDLNVHDIFVQL 120
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.100e-37 Identity = 78/176 (44.32%), Postives = 105/176 (59.66%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSPPFLACVPPAWGEHSLTVFCEARNLSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKRQPAQSAADTLHLDSAGGASSMC 531
QIWDTAGQEKYHSLAPMYY+GA AAIVVYDITK ++ +TLK+W+ EL++QGP++I IA+AGNK DLESER ++ A++YA IGA F+ETSAKT V ++F +SK+LP+++ A + L+L + G+S C
Sbjct: 63 QIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESERE-----------------------------------------VDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNKLNLKAGKGSSGGC 197
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.940e-37 Identity = 82/171 (47.95%), Postives = 98/171 (57.31%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSPPFLACVPPAWGEHSLTVFCEARNLSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKRQPAQSAADTLHLDSAGG 516
QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+ S TLK W+ EL+ GP++I IAIAGNK DLE +R P S A+AYA+EIGA+F+ETSAK DT V D+F+ +SK+LP +A + LD GG
Sbjct: 62 QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKREVP-----------------------------------------SAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLPTAAAETNALPEI-LDPYGG 190
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: D8LEW7_ECTSI (Rab22, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW7_ECTSI) HSP 1 Score: 139 bits (350), Expect = 4.930e-36 Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESER 213
QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKM+S RTLKEWINELQAQGPQDIAIA+AGNKRDLES+R
Sbjct: 65 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 134
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD) HSP 1 Score: 140 bits (352), Expect = 1.640e-35 Identity = 80/171 (46.78%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSPPFLACVPPAWGEHSLTVFCEARNLSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKRQPAQSAADTLHLDSAGG 516
QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+ S TLK W+ EL+ GP +I IAIAGNK DLE +R P + ARAYAEEIGA+F+ETSAK D V D+F+++S+ LP +A + +D GG
Sbjct: 62 QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVP-----------------------------------------ASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALPTASNESNALPEI-VDPYGG 190
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT) HSP 1 Score: 140 bits (352), Expect = 1.690e-35 Identity = 80/171 (46.78%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSPPFLACVPPAWGEHSLTVFCEARNLSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKRQPAQSAADTLHLDSAGG 516
QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+ S TLK W+ EL+ GP +I IAIAGNK DLE +R P + ARAYA EIGA+F+ETSAK DT V D+F+++S+ LP +A + +D GG
Sbjct: 63 QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVP-----------------------------------------ASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESNALPEI-VDPYGG 191
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: A0A834GBV1_RHOSS (Uncharacterized protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A834GBV1_RHOSS) HSP 1 Score: 142 bits (357), Expect = 2.030e-35 Identity = 86/207 (41.55%), Postives = 117/207 (56.52%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSP----PFLAC------------------VPPAWGEHSLTVFCEARN-------LSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKRQPAQSAADTLHLD--SAGGASSMC 531
+IWDTAGQE+YHSLAPMYYRGA AAI+VYDIT +S K+W+ ELQ QG ++ + +AGNK DL +R P P L C + P+ E L + LS +VP ++ Q + + ARAYAEEIG F+ETSAKT V D+F E++KRLP+ QPAQ+ A + ++ + G ++ C
Sbjct: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTDSFARAKKWVQELQKQGNPNMVMTLAGNKADLADKREVPVEVLPLLLCAYIYCRIAFFFMSSCYSDIMPSDREMLLDQVPRVHSPNAGRFDLSSPSVPTMNSKKQWW--NLEARAYAEEIGLFFIETSAKTAANVNDIFYEIAKRLPRAQPAQNPAGMVLVERPTEGSQAASC 266
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Match: A0A7J7GVS6_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GVS6_CAMSI) HSP 1 Score: 138 bits (347), Expect = 1.210e-34 Identity = 76/157 (48.41%), Postives = 97/157 (61.78%), Query Frame = 1
Query: 4 QIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLESERVSPPFLACVPPAWGEHSLTVFCEARNLSKYNVPLLSPCNQRFAESCVARAYAEEIGAMFVETSAKTDTQVQDVFVELSKRLPKRQPA 474
+IWDTAGQE+YHSLAPMYYRGA AAI+VYDIT S K+W+ ELQAQG ++ +A+AGNK DL R P +C G FC R L + + + E A+ YA+E G F+ETSAKT T V ++F E++KRLP+ QPA
Sbjct: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNSNMVMALAGNKADLLDARKVPAEASCGAGVGGN-----FCHGRCLKVWIM---------YEE---AQIYAQENGLFFMETSAKTATNVNEIFCEIAKRLPRVQPA 201 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9087.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9087.9.1 >prot_A-nodosum_M_contig9087.9.1 ID=prot_A-nodosum_M_contig9087.9.1|Name=mRNA_A-nodosum_M_contig9087.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=162bp MYYRGAGAAIVVYDITKMNSSRTLKEWINELQAQGPQDIAIAIAGNKRDLback to top mRNA from alignment at A-nodosum_M_contig9087:19645..21203- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9087.9.1 ID=mRNA_A-nodosum_M_contig9087.9.1|Name=mRNA_A-nodosum_M_contig9087.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1559bp|location=Sequence derived from alignment at A-nodosum_M_contig9087:19645..21203- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9087:19645..21203- >mRNA_A-nodosum_M_contig9087.9.1 ID=mRNA_A-nodosum_M_contig9087.9.1|Name=mRNA_A-nodosum_M_contig9087.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at A-nodosum_M_contig9087:19645..21203- (Ascophyllum nodosum dioecious)back to top |