mRNA_A-nodosum_M_contig90.29.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: D7FZW7_ECTSI (DUF2470 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW7_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 8.220e-157 Identity = 241/302 (79.80%), Postives = 259/302 (85.76%), Query Frame = 1
Query: 175 MEAAGESA--AEEKKKGERGGDAPDA*EQPTGHQPGPGRARSPEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSLIGDARKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGMGDGQSGKLRLPFPRPAESRADVKTLIVEMTNAAM 1074
MEA+G+SA A EKK+ G P A TGH GPG RSPE+EALAARIQEHQ+ AARLSHTEEVRNLMQYSTGFGVLSTNS++LEGYPSGSVVGF+LDD GRPLFAFSSMS+HT DL +DSRVSLTVTAA FKGAADGRVSLIGD KVP+EDL SVREMYK KHP AYW+DFGDF LMRMDTIK MRFVGGFAMAG+V P DY+ T PD + EFS PI HMNDDHS+TT+AM+ HFITGGVEVTSAQITAVDRLGMYVLVGM DGQSGKLRLPFPRPAESR DVKTLIVEMT AAM
Sbjct: 1 MEASGDSAESATEKKEEASGHSPPKA----TGHAAGPGPQRSPEQEALAARIQEHQQAAARLSHTEEVRNLMQYSTGFGVLSTNSRTLEGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAATFKGAADGRVSLIGDVNKVPEEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVNPEDYLTTAPDAVAEFSAPISKHMNDDHSDTTRAMIAHFITGGVEVTSAQITAVDRLGMYVLVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAM 298
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A836CG39_9STRA (DUF2470 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG39_9STRA) HSP 1 Score: 371 bits (953), Expect = 5.170e-124 Identity = 187/277 (67.51%), Postives = 225/277 (81.23%), Query Frame = 1
Query: 250 EQPTGHQP-GPGRARSPEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSLIGDARKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGMGDGQSGKLRLPFPRPAESRADVKTLIVEMTNAAMP 1077
EQPTGHQP G G R+PE+EAL+ARIQEHQ+ AARL+ EEV+ L+ YSTGFGVLSTNS+ LEGYP+GSVVGF LDD GRPLFAFS+MS+HT DL +D R S+T+ AANFKGA+DGRV+LIGD +VP++++ +VR YK KHP A+W+DFGDFS RMDTIK +RFVGGFAMAG++ DY+ATKPDPI F+ PI+THMN DHS++T AMV+H+ITGG +V SA + VDR GM VLV MG G+SGKLRLPFP PA+ R VK IVEMT AA P
Sbjct: 7 EQPTGHQPRGGGPQRTPEQEALSARIQEHQRSAARLTKAEEVKTLVAYSTGFGVLSTNSKKLEGYPNGSVVGFGLDDAGRPLFAFSTMSAHTSDLGADGRASMTIMAANFKGASDGRVTLIGDVGRVPEDEIEAVRTSYKVKHPNAFWVDFGDFSWFRMDTIKAIRFVGGFAMAGDITSEDYLATKPDPIAGFAEPIMTHMNSDHSDSTAAMVEHYITGGAKVDSATLVGVDRKGMNVLVAMG-GESGKLRLPFPSPADDRKAVKDRIVEMTRAAAP 282
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A7S4FQ63_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FQ63_9EUGL) HSP 1 Score: 307 bits (786), Expect = 1.640e-97 Identity = 158/269 (58.74%), Postives = 200/269 (74.35%), Query Frame = 1
Query: 292 SPEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSLIGDARKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGMGDGQSGKLRLPFPRPAESRADVKTLIVEMTNA----AMPAPA 1086
S EE LA +QEHQK AARLSH E+ RN+MQY TG+GV+STNS+S +GYPSGS+VG+A DD GRP+F+FS+MSSHT+D+ D RVSLTVT FKGAADGRVSL GD +VP E+ +V MY KHP A+W+ FGDFS RM+ IK +R++GGFA AG++ P +Y AT PD I F+TP+++HMN DH + AMV H++ ++V +A I +DRLGM ++V +GQS KLRLPFPRPA +R +VK LIVEMT A A PAPA
Sbjct: 107 SEEEMKLAQALQEHQKEAARLSHAEDARNMMQYGTGYGVISTNSESDDGYPSGSIVGYAPDDKGRPVFSFSTMSSHTQDIQKDPRVSLTVTVEGFKGAADGRVSLTGDLVRVPKEEKEAVAAMYLKKHPDAFWVQFGDFSWWRMENIKTIRYIGGFARAGSITPEEYEATAPDAIAAFATPVMSHMNADHGDANVAMVNHYLP--IQVEAANIVGLDRLGMDMMVTR-EGQSFKLRLPFPRPATNRKEVKDLIVEMTKASAKAAAPAPA 372
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A7S4EVY0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVY0_CHRCT) HSP 1 Score: 297 bits (761), Expect = 9.610e-94 Identity = 157/273 (57.51%), Postives = 202/273 (73.99%), Query Frame = 1
Query: 262 GHQPGPGRARSPEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSD---SRVSLTVTAANFKGAADGRVSLIGDARKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGMGDGQSGKLRLPFPRPAESRADVKTLIVEMTNAA 1071
GHQ S EE+A+ A++ HQ+ AARLS E+ R+L+ YSTG+GVLST S+SL G+PSGSVVGFA+DD G P+F FS MS H +DLL+ + +LTVTA +FKGAA+GRV+L+G R+VP ++ +RE+Y+AKHP A+W+DFGDFS +MD +K +RFVGGFA AG++ P +YM + DPI F+ P++ HMN DHS+ T MVQH+I G EV A++ A+DRLGM V V GQS KLRLPFPRPAESR DVKTLIVEMT A+
Sbjct: 98 GHQVRNAPELSEEEKAVQAKVMAHQQDAARLSKAEDSRSLVAYSTGYGVLSTMSKSLPGFPSGSVVGFAIDDKGLPIFCFSGMSGHAQDLLASPDAAPAALTVTANDFKGAAEGRVTLVGTVRRVPSDEADPLREIYRAKHPNAFWVDFGDFSWFKMDELKAVRFVGGFARAGDMTPEEYMQAEVDPIQAFAKPVMEHMNADHSDATTLMVQHYI-GLPEVEDAKVAALDRLGMTVQVTR-KGQSFKLRLPFPRPAESRKDVKTLIVEMTQAS 368
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A7S3U682_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U682_9SPIT) HSP 1 Score: 284 bits (726), Expect = 1.330e-88 Identity = 152/275 (55.27%), Postives = 198/275 (72.00%), Query Frame = 1
Query: 262 GHQPGPGRARSPEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSD---SRVSLTVTAANFKGAADGRVSLIGDARKVPDED-LASVREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGMGDGQSGKLRLPFPRPAESRADVKTLIVEMTNAAM 1074
GHQ S EE+ + A + EHQKGAARLS E+ R+L+ YS+G+ VLST S+ L+GYPSGS+VGFA DD G PLF FS+MSSHT+DL+ D ++ +LTVTA F+GAADGRV+L+GD +V DE+ L ++R+ Y+ KHP A+W+DFGDFS RM +K +RFVGGFA AG++ P DY A DPI F+ P++ HMN+DHS++T AMV H+I G +V A + A+DRLG V V GQ+ KLRLPFPR AE R DVK LIV+MT ++
Sbjct: 64 GHQVTGAPQLSEEEKKVQAAVMEHQKGAARLSQAEDARSLIGYSSGYAVLSTLSKQLDGYPSGSLVGFATDDKGLPLFCFSAMSSHTQDLMRDPKGAKAALTVTATGFEGAADGRVTLVGDVARVKDEEELVTLRKTYREKHPDAFWVDFGDFSWWRMRELKAVRFVGGFARAGDIAPDDYQAATVDPIQAFAKPVMNHMNEDHSDSTIAMVMHYI-GLNQVEKASLVALDRLGFMVQVTRL-GQTFKLRLPFPRAAEDRKDVKNLIVQMTQESL 336
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A6T8CG84_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8CG84_9EUKA) HSP 1 Score: 274 bits (700), Expect = 8.210e-86 Identity = 140/263 (53.23%), Postives = 190/263 (72.24%), Query Frame = 1
Query: 292 SPEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSLIGDARKVPDEDLAS--VREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGMGDGQSGKLRLPFPRPAESRADVKTLIVEMTNAAM 1074
S EE+ + + EHQ+GAARLS E+ R+L+ Y++G+ VLST S++++GYPSGS+VGFA D+ G P+F FS+MS HT+DL + +L VTA F+GAADGRV+LIGD ++ E++ + ++E+Y+AKHP A+W+DFGDF+ RM +K + FVGGFA AGN PADYM DPI F+ P++ HMN DHS +T AMV H+I G +V A++ +DRLG V V GQ+ KLRLPFPR AE R DVKTLIV+MT A++
Sbjct: 1 SEEEKRVQTAVMEHQRGAARLSQAEDSRSLVAYNSGYAVLSTLSKAVDGYPSGSLVGFATDEKGLPVFCFSAMSGHTKDLAKAGKAALCVTAKGFEGAADGRVTLIGDVKRCSKEEVEADGLKELYRAKHPNAFWVDFGDFTWYRMTELKAVNFVGGFARAGNPSPADYMDASVDPIQAFAAPVMGHMNADHSESTIAMVMHYI-GLPQVEKAELVQLDRLGFMVQVTR-TGQTFKLRLPFPRAAEDRKDVKTLIVQMTQASL 261
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A7S0LER7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LER7_9EUKA) HSP 1 Score: 271 bits (693), Expect = 1.430e-83 Identity = 144/270 (53.33%), Postives = 190/270 (70.37%), Query Frame = 1
Query: 292 SPEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLL-------SDSRVSLTVTAANFKGAADGRVSLIGDARKVPDEDLAS--VREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGMGDGQSGKLRLPFPRPAESRADVKTLIVEMTNAAM 1074
S EE+ + + EHQ+ AARLS E+ R+L+ YSTG+ VLST S +L+GYPSG++VGFA D+ G P F FS+MSSHT+DL+ S + +L VTA F+GAADGRV+LIGD +V E + +RE+Y+ KHP A+W+DFGDF+ RM +K + FVGGFA AG+++P YM DPI F+ P+++HMNDDHS++T AMV H+I G +V A++ +DRLG V V GQ+ KLRLPFPRPA R DVKTLIVEMT AA+
Sbjct: 84 SEEEKIVQTAVMEHQRSAARLSQAEDARSLVGYSTGYAVLSTLSSALDGYPSGALVGFAHDERGLPFFCFSAMSSHTKDLVAAERSCESGGKAALCVTAKGFEGAADGRVTLIGDVSRVKKEQVEEQGLRELYRQKHPNAFWVDFGDFTFYRMHELKAINFVGGFARAGSIDPEAYMNAVIDPIQAFAAPVMSHMNDDHSSSTTAMVMHYI-GLPQVEKAELVQLDRLGFMVQVTRL-GQTFKLRLPFPRPAGDRKDVKTLIVEMTRAAL 351
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A7S4RLC2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RLC2_9DINO) HSP 1 Score: 270 bits (690), Expect = 2.780e-83 Identity = 150/288 (52.08%), Postives = 195/288 (67.71%), Query Frame = 1
Query: 235 APDA*EQPTGHQP---GPGRARSPEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSLIGDARKVPDED-LASVREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGM-----GDGQSGKLRLPFPRPAESRADVKTLIVEMTNAA 1071
AP+ EQPTGHQ G G PEE A+ R++EHQ A +L EVR L++Y+ GF V+STNS ++ G+P GSVVGFA D+ GRPLF FS+MS+HT DL+ D + SLTV A FKGAADGRV+LIG+A++V DE+ A+ R +YK KHP A+WIDFGDF RM+ ++ +RFVGGFA AG+V +Y KPDPI F + HMNDDH + T AMV ++ G++V A+IT++D LGMYV V Q K+RLPF RP + R D K +IVEM+ A+
Sbjct: 75 APEKEEQPTGHQVNTRGGGVKLDPEEAAVQERLREHQASAPKLGAPVEVRTLVEYNHGFAVISTNSVAMPGFPGGSVVGFAPDEAGRPLFFFSTMSTHTTDLMQDGKCSLTVAAKEFKGAADGRVNLIGEAKEVTDEEEKAAARVIYKKKHPGAFWIDFGDFKFFRME-VQFVRFVGGFARAGSVTAEEYAEAKPDPIAAFGPGMAKHMNDDHRSATIAMVGKYV--GIDVEDAEITSIDSLGMYVKVSRKPKAADQYQQFKIRLPFIRPLKERKDAKDVIVEMSRAS 359
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A7R9ZB21_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB21_9STRA) HSP 1 Score: 270 bits (690), Expect = 6.500e-83 Identity = 140/264 (53.03%), Postives = 183/264 (69.32%), Query Frame = 1
Query: 295 PEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSLIGDARKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGM-----GDGQSGKLRLPFPRPAESRADVKTLIVEMTNAA 1071
PEE + EHQ+ A +L ++R L+QY+ GF V+STNS++ GYP GSVVGFA D++GRP+F FS MS+HT+DLL+D R SLT+ A FKGAADGRV+L+G KVP E+ +++++Y KHP A+W+ FGDF+ RMD IK +RFVGGFA AG+V P +Y KPDPI F + + HMN+DH ++T AM+ I G ++VT A IT+VD LGMYV V Q KLRLPFPR A+ R DVK +IVEMT +A
Sbjct: 120 PEEMKIQQAFAEHQQNAPKLGWATDIRTLVQYNHGFAVMSTNSKANPGYPGGSVVGFAPDEEGRPVFIFSGMSTHTQDLLADPRCSLTIAAKEFKGAADGRVNLMGKVSKVPPEECEALKQLYLEKHPGAFWVHFGDFNWFRMDDIKDIRFVGGFARAGSVTPQEYSEAKPDPISAFGSHVANHMNEDHMDSTIAMIADQIPG-MDVTDAVITSVDSLGMYVKVSRTPRASDQPQQFKLRLPFPRQAKDRKDVKDIIVEMTRSA 382
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Match: A0A0G4I9C8_9ALVE (DUF2470 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I9C8_9ALVE) HSP 1 Score: 275 bits (702), Expect = 9.510e-83 Identity = 136/266 (51.13%), Postives = 188/266 (70.68%), Query Frame = 1
Query: 295 PEEEALAARIQEHQKGAARLSHTEEVRNLMQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSLIGDARKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKVMRFVGGFAMAGNVEPADYMATKPDPIVEFSTPILTHMNDDHSNTTKAMVQHFITGGVEVTSAQITAVDRLGMYVLVGMGDGQSGKLRLPFPRPAESRADVKTLIVEMTNAAMPAPAGN 1092
PEE AL ARIQEHQ AARLS E+ R+L++YSTG+G LST S SLEG+P VV F LD++G+P+F S+MSSHT+D+L + V+LTVTA+ FKG+ADGRV LIG +++ E+ + +Y +HPK +W+ FGDF + +M+ I+ +R+VGGFA A + +Y + PDPI++F+ P++THMN+DHS+ TK +V H G A+I +DRLGM V G + + KLR+PFPRPAESR D+K L+V+MT A A AG+
Sbjct: 274 PEEAALQARIQEHQANAARLSPAEDARSLVEYSTGYGTLSTISSSLEGFPGAGVVAFGLDEEGKPIFCVSTMSSHTQDILKNPNVALTVTASGFKGSADGRVVLIGTLKRLLKEESGEAKALYSDRHPKHFWVQFGDFLMFKMEKIEAVRYVGGFARAESFTAEEYSSATPDPIMQFAQPVMTHMNEDHSDATKNIVLH--ATGFPAQHAEIVNLDRLGMTVKCGRKEDEQLKLRIPFPRPAESRKDIKELLVQMTREAAQAAAGS 537 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig90.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig90.29.1 >prot_A-nodosum_M_contig90.29.1 ID=prot_A-nodosum_M_contig90.29.1|Name=mRNA_A-nodosum_M_contig90.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=238bp MQYSTGFGVLSTNSQSLEGYPSGSVVGFALDDDGRPLFAFSSMSSHTRDLback to top mRNA from alignment at A-nodosum_M_contig90:394752..403319+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig90.29.1 ID=mRNA_A-nodosum_M_contig90.29.1|Name=mRNA_A-nodosum_M_contig90.29.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8568bp|location=Sequence derived from alignment at A-nodosum_M_contig90:394752..403319+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig90:394752..403319+ >mRNA_A-nodosum_M_contig90.29.1 ID=mRNA_A-nodosum_M_contig90.29.1|Name=mRNA_A-nodosum_M_contig90.29.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=714bp|location=Sequence derived from alignment at A-nodosum_M_contig90:394752..403319+ (Ascophyllum nodosum dioecious)back to top |