mRNA_A-nodosum_M_contig9.79.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig9.79.1
Unique NamemRNA_A-nodosum_M_contig9.79.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: D7G9H7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H7_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 6.310e-42
Identity = 127/296 (42.91%), Postives = 157/296 (53.04%), Query Frame = 1 
Query:  235 ERQRALAEAVVRNLNTHELVAIASGRVPAG--LAANG-----------EQRAGVSEETRQSFIKISAGKGGYVPSKAVTDSPRPTLKAGNLDTGNIAAGSSPDLESGLPARD------AARPKSACVVSAEQSCPESHLP----GSAAPGEALPSRQDSEGVAALGSVSPEEAWASKGKGKATGAADSVKETAPGSYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDKLAKVVQIFPTRSRRSLQRALANTEGNIMAAVDFLLSERGRRGVEPNDG 1053
            ERQ+ALAEAVVR ++THELVAIASGR  +G  L + G           EQ AGVS+ETR SF+K+SAGK G  P+  VT    P                         A D      A     +  +  E+S P    P    GS++P  +    + S+                        A   V       YSDNSCSVCL++YEEG +LLQ+TCGHVFH +CID WL +HRVCPCCR DLDKLA+VVQ+FP  S+RSLQ AL   EGNI+ AV+FLL+  G  G  P+ G
Sbjct:    2 ERQQALAEAVVRQMDTHELVAIASGRFGSGGGLLSRGRGRASRRFQQAEQTAGVSQETRMSFVKLSAGKRGLAPAHDVT---APXXXXXXXXXXXXXXXXXXXXXXXXXAADCSGCAWAGGGSKSPTLYYERSNPLCRKPCVGVGSSSPSLSSARPRSSKRFFXXXXXXXXXXXXXXXXXXXXXATRGV-------YSDNSCSVCLDDYEEGDELLQVTCGHVFHRACIDHWLKAHRVCPCCRTDLDKLAQVVQLFPQISKRSLQNALTRAEGNIVLAVEFLLTRPGGDGSTPDAG 287
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BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A6H5JXK0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK0_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 1.570e-41
Identity = 133/357 (37.25%), Postives = 170/357 (47.62%), Query Frame = 1 
Query:  181 LTRNLCRDPETVQAEAERERQRALAEAVVRNLNTHELVAIASGRVPAG--LAANG-----------EQRAGVSEETRQSFIKISAGKGGYVPSKAVTDSPRPTLKAGNLD-------------------------------------TGNIAAGSSPDLESGLPARDAARPKSACVVSAEQSCPESHLPGSAAPGEALPSRQDSEGVAALGSVSPEEAWASKGKGKATGAADSVKETAPGS----------------YSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDKLAKVVQIFPTRSRRSLQRALANTEGNIMAAVDFLLSERGRRGVEPNDG 1053
            +TR LCRDP+ +Q E   ERQ+ALAEAVVR ++THELVAIASGR  +G  L + G           EQ AGVS+ETR SF+K+SAGK G+ P+  VT +P P+     L                                      +  +    S  + S  P+  +ARP+S+             + G +  G                                                              YSDNSCSVCL++YEEG +LLQ+TCGHVFH +CID WLM+HRVCPCCR DLDKLA+VVQ+FP  S+RSLQ AL    GNI+ AV+ LL+  G  G  P+ G
Sbjct:   21 VTRTLCRDPDLLQPEGYMERQQALAEAVVRQMDTHELVAIASGRFGSGGGLLSRGRGRATRRFQQAEQTAGVSQETRMSFVKLSAGKRGHAPAHDVT-APPPSTAVTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSPTSYYERSNPLCRKPSVGVGSSSPSLSSARPRSSKRF---------FIDGGSGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXLYSDNSCSVCLDDYEEGDELLQVTCGHVFHRACIDHWLMAHRVCPCCRTDLDKLAQVVQLFPQISKRSLQNALTRAGGNIVLAVEILLTRPGGDGSTPDAG 367
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BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A4V1IU11_9FUNG (RING-type domain-containing protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IU11_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 6.140e-10
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1 
Query:  760 DNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCR 894
            D  CS+CLE+Y  G++L+ L C HVFH +CI +WL SH+ CP CR
Sbjct:   48 DQRCSICLEDYTRGERLITLPCRHVFHKTCISMWLQSHKECPICR 92
[Close]
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: D2VEK0_NAEGR (RING-type domain-containing protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEK0_NAEGR)

HSP 1 Score: 66.2 bits (160), Expect = 6.150e-10
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 1 
Query:  748 GSYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADL 903
            G + D SC+VC+ ++EE  +L++L CGHVFH  C+  WL  H  CP CR +L
Sbjct:    2 GEHCDQSCAVCICDFEECDELIRLPCGHVFHKDCVSTWLNEHNTCPTCRYEL 53
[Close]
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A447BSG1_PODCO (RING-type domain-containing protein n=2 Tax=Podospora TaxID=5144 RepID=A0A447BSG1_PODCO)

HSP 1 Score: 69.7 bits (169), Expect = 1.680e-9
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 1 
Query:  751 SYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRV-CPCCRADLDKLAKVVQIFPTRSRRSLQRALANTE 981
            S + +SC++C E++ EG  + +L+CGH+FH SC+D WL+   V CP CR DL   AK      TR +R+LQR  +  E
Sbjct:  136 STTSHSCAICTEDFVEGGDVRKLSCGHIFHLSCVDPWLLQFAVTCPLCRVDLQ--AKTALNAVTRPQRALQRDTSRVE 211
[Close]
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A218WB08_PUNGR (RING-type E3 ubiquitin transferase n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218WB08_PUNGR)

HSP 1 Score: 67.0 bits (162), Expect = 5.960e-9
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 1 
Query:  760 DNSCSVCLEEYEEGKQLLQLT-CGHVFHHSCIDLWLMSHRVCPCCRAD 900
            DN+CS+CL E+EEG++L  L  C H FH  CID+WL SH  CP CRAD
Sbjct:   91 DNTCSICLCEFEEGEELRTLPECAHPFHAPCIDMWLYSHASCPMCRAD 138
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BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A7S2MEK1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MEK1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.120e-8
Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = 1 
Query:  760 DNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDKLAKVVQIFPTRSRRSLQRALANTEGNIMAAVDFLL 1014
            D +C +CL EYE+G ++ QL CGH FH  CID WL +H  CP CR +L        + PT    +  R    +   I  A + +L
Sbjct:   43 DETCPICLVEYEDGDEVRQLPCGHEFHVDCIDSWLEAHTSCPSCRNELSN-----SVTPTSGDSNSSREGGQSTSTIRQATNMML 122
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BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A0N4W5U8_HAEPC (RING-type domain-containing protein n=1 Tax=Haemonchus placei TaxID=6290 RepID=A0A0N4W5U8_HAEPC)

HSP 1 Score: 64.3 bits (155), Expect = 1.660e-8
Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 1 
Query:  760 DNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDK 909
            D  C+VC++ Y+ G  +  L C HV+H SCID WL+ HR CP C+AD+ K
Sbjct:   53 DIDCAVCIDPYQTGDVVRTLPCRHVYHKSCIDPWLLEHRTCPMCKADILK 102
[Close]
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: T1EHN1_HELRO (RING-type domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EHN1_HELRO)

HSP 1 Score: 62.0 bits (149), Expect = 1.860e-8
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 1 
Query:  754 YSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCR 894
            ++DNSC++C++ +EEG  + +L C HVFHH CI  W   +  CP CR
Sbjct:    3 FTDNSCAICMDPFEEGSFVRELHCAHVFHHQCIGEWFKENASCPICR 49
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BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A0N5A9D5_9BILA (RING-type domain-containing protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5A9D5_9BILA)

HSP 1 Score: 68.6 bits (166), Expect = 1.890e-8
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 1 
Query:  760 DNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDKLAKVVQ------IFPTRSRRSLQRALANTEGNIMA 996
            D  C VC++ Y+ G  +  L C HVFH +C+DLWL+ HR CP C++D+ K+  V++      I   RS   L   +A    NI A
Sbjct:  167 DADCPVCIDPYQTGDIIRSLPCKHVFHKTCVDLWLLEHRTCPMCKSDILKVTHVLRMNRLSAINARRSADQLVDIVAKDCSNIQA 251
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9H7_ECTSI6.310e-4242.91RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JXK0_9PHAE1.570e-4137.25RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A4V1IU11_9FUNG6.140e-1055.56RING-type domain-containing protein (Fragment) n=1... [more]
D2VEK0_NAEGR6.150e-1048.08RING-type domain-containing protein (Fragment) n=1... [more]
A0A447BSG1_PODCO1.680e-943.59RING-type domain-containing protein n=2 Tax=Podosp... [more]
A0A218WB08_PUNGR5.960e-960.42RING-type E3 ubiquitin transferase n=1 Tax=Punica ... [more]
A0A7S2MEK1_9STRA1.120e-837.65Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A0N4W5U8_HAEPC1.660e-850.00RING-type domain-containing protein n=1 Tax=Haemon... [more]
T1EHN1_HELRO1.860e-846.81RING-type domain-containing protein n=1 Tax=Helobd... [more]
A0A0N5A9D5_9BILA1.890e-838.82RING-type domain-containing protein n=1 Tax=Syphac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9contigA-nodosum_M_contig9:1539814..1551220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G9H7
PFAMszf-RING_2
Model size3746
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue5.39e-45
EggNOG OGsKOG0800@1|root,KOG0800@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-28_000960.1
Descriptionubiquitin-protein transferase activity
Cds size1527
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9.79.1prot_A-nodosum_M_contig9.79.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig9 1541901..1551088 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870337.0753317-UTR-A-nodosum_M_contig9:1539813..15419001680870337.0753317-UTR-A-nodosum_M_contig9:1539813..1541900Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9 1539814..1541900 -
1680870337.2166836-UTR-A-nodosum_M_contig9:1551088..15512201680870337.2166836-UTR-A-nodosum_M_contig9:1551088..1551220Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9 1551089..1551220 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870337.0890856-CDS-A-nodosum_M_contig9:1541900..15426661680870337.0890856-CDS-A-nodosum_M_contig9:1541900..1542666Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9 1541901..1542666 -
1680870337.102335-CDS-A-nodosum_M_contig9:1548761..15492911680870337.102335-CDS-A-nodosum_M_contig9:1548761..1549291Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9 1548762..1549291 -
1680870337.1899061-CDS-A-nodosum_M_contig9:1550443..15506231680870337.1899061-CDS-A-nodosum_M_contig9:1550443..1550623Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9 1550444..1550623 -
1680870337.2026896-CDS-A-nodosum_M_contig9:1551037..15510881680870337.2026896-CDS-A-nodosum_M_contig9:1551037..1551088Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9 1551038..1551088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig9.79.1

>prot_A-nodosum_M_contig9.79.1 ID=prot_A-nodosum_M_contig9.79.1|Name=mRNA_A-nodosum_M_contig9.79.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=509bp
MAETLRHARTLVALRDLTRNLCRDPETVQAEAERERQRALAEAVVRNLNT
HELVAIASGRVPAGLAANGEQRAGVSEETRQSFIKISAGKGGYVPSKAVT
DSPRPTLKAGNLDTGNIAAGSSPDLESGLPARDAARPKSACVVSAEQSCP
ESHLPGSAAPGEALPSRQDSEGVAALGSVSPEEAWASKGKGKATGAADSV
KETAPGSYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVC
PCCRADLDKLAKVVQIFPTRSRRSLQRALANTEGNIMAAVDFLLSERGRR
GVEPNDGARAAAGSGLITSEAARPSQASDRPPGTSRSTGEELICGLVSLP
LERDGAAFGGSTSGGPANDSARDPDAVGLRPESRPSSASAAAGLFRLSFG
RTRPRDAEAVSGATSSQAPQLAAVTATGGATGGIVGGGNRSAEGIRSMAV
MVDEEMGTSFSQQVGMAIARALQQRSSPEPSSDAAELHQRLGDTTASPCP
PGRLEANV*
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mRNA from alignment at A-nodosum_M_contig9:1539814..1551220-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig9.79.1 ID=mRNA_A-nodosum_M_contig9.79.1|Name=mRNA_A-nodosum_M_contig9.79.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11407bp|location=Sequence derived from alignment at A-nodosum_M_contig9:1539814..1551220- (Ascophyllum nodosum dioecious)
CTTTTGCCCACACACCCTGGTAGGCTATAACGGCAAAAAAAAGTCCCAGG
AACGCTGCCGACACACGCGCTGTGGCCATGGCTGAGGCATCGCTGAGGCA
TCGCCTGGAGCAGCAAAAATGACGCCGAGGCGATGGCTGAGACATTGCGA
CACGCTCGAACGCTCGTAGCTTTACGAGACCTGGCGAGTAATCGTCGTCG
CTCGCTTGGGTTTGTGCCTTGTGAGCGTCACGTATTCGGTGACTATTGAT
AATAGTATCAGTATGGCCTGTTCATAGCACAGCAACTACGAAGCACTTTA
AAAACTATATATATATATATATATTGAAGGCATGTACACAAAATGTTTAA
GAAAAAGCTGAACGCATCTAAGCCTTCTGAGCATCCACCTTCAAGTTCAA
GTATACACTTTTCGTATCATAGCCCTCAACAGTTACAACAGTTACAACAG
CGAGCGGTAACCACGGCGGCGCCGCTTAATTTTAGAAATGCAATTTCTAA
TTCTTAACTTGATATCAATAGTCTAACAACATGCACATGCGCTCGTCGTC
CAATCAATCCCCGTTTGCATGCCATTGCCTCTGATCATCTCGAGCAGACG
CGGAACCTCTGCCGAGATCCCGAAACCGTGCAGGCAGAGGCTGAGCGGGA
GCGCCAGCGTGCGCTGGCGGAGGCGGTGGTCAGGAACCTGAACACGCACG
AGCTGGTGGCCATCGCGTCAGGGAGAGTCCCAGCGGGCCTCGCGGCCAAT
GGAGAGCAAAGGGCAGGCGTCAGCGAGGTGAAGACAATACCCGTGAAATG
TGTGTGTGTGTGTGTGTGTGTGTGTGCGTACCGTGTATGTTGTATTGGAG
AGGATGGTGATGGTTTGTGTCTACAACAGTGTATTGTCTGTGTCGTATGT
ATGTATTCATGTGTATGTATGTCTGGCTGTAAAGTGTAAGTATGTCCCGC
GAATCACAAAGTAGATGAGGACTACAGTTAGTAGCGATACTTCTACACGG
GTGCTTCGATTGGCTTCGATTCCAGGCGCAGAAGGGGGCGGACAGGGTGT
TGTATCCTGCCCACGCATTTTTTTTTGCCTTGGAGGACTCGTCCCTTATT
ATTATTTTAGACTAGTGTATGTTTGTGGGGTGGGGACAGTGCAAGCGTCT
CGGTAATGATGATTGTGGAGATGACGTCGGATTTTAAGGGCGGCATGCAC
GATACGATGGTACAGCACCGTTTTCGCCTTACAGCGTCTCGTCGTAAGTG
ATGATTGCTAGGAGATTCGATTCGTCGTAGATTTGTGTTCTTTCTTTCGT
AACGGAAAGCGTGGGAACGTGAGTAAGTAAAATTCACGATTGGTTGACGA
GTTGTAAGAGTGCTGAACTTGCATCGCGATTTTCGACTTACAGAGATGGG
AAGATCCTTTGTGACCACAGGCAGGATGGTATATCCATCGGCTAGTGAGT
TCAAAGAAAAAAAAAAAAAAAAAAAGTACCGCTATATCTAGAGTTCATGA
TTTGCAATGAACCGCGTAAGATTACTCGCACACTCAAGAGACTTGCACGA
CTTGTTGCACTTTTTGAGCCATCGCGTACTGTATTCTCCCAATATCGGTA
ATTTTGTTGATCGCGCGTTCAAGCCCGGTTGTCCTTCCAACTGAAAAAAC
ATCACAGTTCAGTCAGCTATAAAAACCTGCGCTGCCATTTCTTGTGAATC
CTGCCTGTGTTGGGTAAAAAATGTTCGAAGGTGTACCCCGTCCCCTTGGA
CGGTGGCGTTTCCGTTGAAGAAACCCCGCCACGCGCACTCGTCATAGTCC
TCACAGTGGCTATGTTAGTCAATGTCTTGTTACCTTCAATAGGTTGAAGT
TAACCTGCTTCCTTCCTCGTCCTGGCTCTCTCGCTCTCGTCGCCCTCCTG
ACCGCCTTCCTGCAAAAAACGGTCTGTAGGAAACCCGACAGTCGTTCATC
AAGATTTCGGCGGGGAAGGGAGGCTACGTTCCCAGCAAGGCCGTCACCGA
CTCCCCCAGGCCGACCTTGAAAGCAGGAAATCTCGACACGGGAAACATCG
CCGCGGGAAGCTCGCCCGACCTTGAGAGCGGGCTCCCAGCTCGTGATGCT
GCCCGGCCGAAGTCGGCTTGTGTTGTCTCGGCAGAGCAATCGTGCCCGGA
GTCTCACCTCCCTGGCAGTGCCGCTCCTGGCGAAGCCTTGCCATCGCGAC
AGGATTCCGAAGGGGTAGCCGCGCTGGGCAGTGTTTCTCCTGAGGAGGCG
TGGGCTTCGAAGGGGAAAGGGAAAGCTACCGGGGCCGCGGATTCGGTGAA
GGAGACTGCGCCCGGGTCGTACTCGGACAATTCATGCTCGGTGTGTCTCG
AAGAGTACGAAGAGGGAAAACAGCTGCTGCAGCTGACGTGCGGTCACGTG
TTCCACCACTCTTGCATCGACCTCTGGCTCATGAGTCACCGCGTCTGCCC
GTGCTGCAGGTGAGTGGCTCATGGTCGGTTTGGTTCGTTTGTTCCCTAGA
TGTGCCGCACGAATGGCTGAAGCAGTTGGCGAGTGTAAAATCTCGTGCGC
ATTATAGCAGGCCGGAGATGGAAGATGATCCCGCTTGAGCTGCCACGGTC
TAGGGAGCTTAGCTGCACTTGTGTTGATCGTTTCAACGCAAACATGCCTC
TTTTTCTTTGGCGTTACGAGAAAGAGATCTACTTCGTATAACTTTGGACC
CCAAAAATTATACAGCTCTACAGTCCCAGTACAGTACAGTACATCTCCTG
CTATATATCAACTCCGTAACTTGGCTGTTTGAATGGAAACTAAACCCTCT
AGTTGTGTACATTAAATAAACCAATACCACAAATTTGTGAAACAGACTGC
ACCAAAATTTTATCTTCTGGAATGGGAGTACCGATAATAAAAGGCGTAAC
TAATATATATATATATATATTATTCAAATTATAGTATAATATAAACTTGG
AGAAACAAAACTTGTTACCCTACCCCAGAAATCAAAAATAACCAATTCGA
TTGGCGATTGGAAGAAATCTAATGGACGTTACCACAACGGACGTACCGTA
TTACTGCCTGGCATAGAGGAGGAGGAGGATATGTTCGCTTACACCGAAAC
GTGGATCTAAAACGTGTACCTTAATTACCGGAGTAGGTACGTCAGTAGCC
TTCTTTGTAGAACGAAGTGCATTGTCAGGTTGATTCTCACACGTATATTT
CTAGTTTCCCAGTTATATTTGGGATTTTCGGAAGTTCTCATTGGGAAATG
CTATCATTTACCAGGTACCACTTGAGAAAAGGGCCCTTTCCTTTCCTTTC
CTTGAGAACTTAACTTGGCCCTTGAGTTGAAAAATTGTCAAAATTGGCGT
CGGAAAGTGAAAACTTTCCGGAAGTTCTCTCACCGGACATGGACGAATAA
ATTTCCTTGTCAACAATAATTTTCCGTTTCATAGGTTAAAATACGGTGGA
AACCCACGATGACCAGGTTTCTCGTACACTGATCCATTCTTGTAGGCCGT
GAGTACGATGACAGTCACCAACAAAGAGCGCTTATAACTTATAACGAAAT
AACAAGAAAAAAAAGAGGTTGAGAAAGGGGAAGCATGTATTATACTATGT
ACCATGTATTATACGGTACTATTTGTCGGTAGCATTCGCTGGTGGGTTCA
CTCGATGGAAGCGAAAAAAGACTGTGTGGTGTCACGCCGCCCACTCCAGA
ACTGGAGTAATTAATACTGAATACAATACTTAATACAAGAGTATACAACG
CCAGGCGCCTAGGGACTCAGTTCATGCTCGAAGATAGATAAGGCACTCGA
GGAGCTATATTGAGCTATATTGAGCTGTTGCCACCCGAAGCGAAGCTGTT
TGTTTGACAGACGCTTCCGGGTACCGTTTGCATTTTCCCGGGAGATCTCA
CAAGCCAAATACAAGAGCTGATCGGGGAGGGATTCGTTTGCAAAAAAATA
AATATATATATGCACATATTAGCTACAATAGCTACAGGGGTGCGAGGAAA
GGAGCTCGAATTTGACGGGGTTGGCGAGTCGGAGGCTCACAAAACTTCCC
CGGTGCTAGTGTGTGTCGGGAGCGCTGTGCATGTGACCCATGACCTCGGT
TTGATAAGACTAATGAATAGAACTGCTGTATTGTTGTGAGCACGGGTACA
GCTCGCCCTACGGTAATCAAATACTGAATGGCTGGTACTGGTTTAGTCAG
TGTTGCTGGGAAACGCCTCTTCCTCGTGTTGAAAACTCTGACTTTTTCGC
TGACCCACGCTATCTGGGATAGCTGTGGCCACCTCGGAGGTAGCTTCCGC
TGTATCACTGTTCCTTGCAGAGGTGTACGAAGTCTTGCGTTTCCAGACCA
ATTATGTTCCACAATATCAATATAAATGTCCACTGCCAAAGTACGTCGAT
ACGTCGATCTGTCGATCGAAAAGTGCGGCGGGGTAAGGGAGGCCCGAATC
GCCACGGGCTGGGATACTCGAGGGCAGCTACCCCGTGAGTGTCGTGAAAG
CCCAGATCTAGGCAACAGGCCACCAAAGATGCATCTCACCATCATCTCTG
GCGAAATCCGGAGTTCAGAGAACCAAGCCAGAAAGTCATGGTGAGCGACC
ACCACCCCGAGATTCAACTGTAAAACTATAATAGTATAGTACTGTCGCAA
ACCGAGCTGGTGTGTGTACACCGAGGAACCGCACAGATACCCTGACTTGA
GCGACTAAGATTGACTCTTGGTCGACGATTTGATTCAATGCGACATGGCA
GCAGGTAGCCTTGGCATGAATGGGTGCGTGTTTATGCCAAATAACTTGGC
TCGTATTTGCCTTGTCCAAGAGTATTTGGAATCATCCCATCGCTACGTAC
TCAAGTGTTGCTGGAAAGTACTTGAAAATAGAGTGGATATCATCGCACTT
GGCACGATCCACCCCGTCGCCCGAGTAATGTAGTATTAATATAATAGTAC
CCTCGCAGATTACTATAATACTGCGGAGTCGAGAGTGCGATTATTGTCTT
TCGTTGTGGCGTCCGCAGCAGAAAGCGTTAAATGGCAGGATGGCAGCGTT
GCAGTACGTGGGATTGGCAACCTAGCAGGCTGAGGCCCATCAGCCGAAAG
TGGTACCTGTGCAACCAACAAAGACGAAATAAATACAAATACCTCCTATG
TGCTGCTGCTGCAAATTACTTCAAAAAGAGTACCCGGAGGCCCGGGGGTC
AGCGCGTAGGTGGAAGCTCCGTCCGAGTGTGCTTTGCGTGTGATCGTCCG
TCCAAAACACGACACGACGCTACAGCGGTGTCTTCTCCATCATGGCGGCA
TGGCGGCATATTGGAGATGGGCCGCTTTGGGCGGGGCTGACAGCCTGGGC
GTGTAGTGTGCAGGGTTGCTGGCCACATGGGCACAAAATGCAGGATGCTG
GATACTCCGCTGCAGGCCGGGGAGGGAGAGTGTTTGTATTCGCACTGACT
GCGGGTACGTATTTCACAATGTGGGGGCGGACATCATCCCGCTGGCATTC
TCCAACCGCTCGATGGTCGATGGTCGATGTGGCACACACGAGGAAACAAA
CCGTCTATGGCACATGATACATGATACAGTACTGCCAGGGTTAAAACTTC
GGGAGCACTGCTGTAGCTATTACTTCGGTCTGCCGTAGCTTTGGTTGCGG
TCGGTCGGAGTCTCAATTCAGCAGTAGTGATCGTCTGCTGTACTACAGCA
GTAGTAAAAGTTCCGCACCGCCCAGAGTCCCTACCGTGTGGCTTGGTACA
CCCCTCTGACTTTCAAAACCTGATAGAACACAGTGAGTTCTATATCCAGT
ATGTATATCAGTGACGCAGCAGTGTGTACTTCAAAAACAACACAGTGTGT
ACTAAACTATATTCAAAACCTTATAAAACAACATTTGCAGCCTATGATCC
CACCTAAACGTTTTGACATTTTTGCCCCCTGACTGGGGGATGCTCAGAAG
GTCTACGTGCGTTCTGATTTTTTTTTAAACACTGTATGTATAAAAACAAC
ATATTAATAGCATTAACAGTGTTTACTCCTATGCAAGGTGGCAAGCGTTT
TAGGCTGCGGGACGGAATAGACATAGCGCGGGCAAATCAGAAGCCGTTGT
TTACATTGCGCGGACCAATCACAGGTTGTTTTAGACATAGCCACCAAACC
TTATTTGCTCGATTCAATACTAGAGTACAGTTTGTTTTCGACAGCCATCA
AACTTTATTCGCTCGATGTAATACTATTGATAGAGTAAAGTAAAGCTCGA
ATACGTGAGGAAAAAATTAGTACCGAACATACAACAAGCAAAACACCTCG
ATTTCGACTGAATGATACTGCGTCCGCCTGTGTATTGCGACGCCCCTCGG
AACATCTGTAGGTATAATACTGTCTAAACGGTAGCGGTATGCTCATCTTG
AGCTGCTTCACTGCTCTCGTACAGGATCTACTCTAGTCTACGTGTTTGGG
GTGCTCCACCATTGTGTATATTACAGGAGGGTTCCGCCATTTAGGCCTGG
CAAGGGGCACACATTTTCTCATGTATTATTCAACTCTAGACTTCCTGTGC
ATTCTCGAAGAGAGGCTGAAAAGTTCTCCTCTGTCGCAAAGGGGATGGCT
AGTGAAACGATAGCGACCTACATGGCACTCAGGGCTGGCATGATCGGACA
GAAAAGGCATTCGACTTGAGTGCCTGTGGATGATGCCATCAATATCACCG
CTTATCACCTGCAAAACACTGCACTGCTGTGCACCATCAGTCACATCAAC
ACAAAATAAAAGACAATCAACCAGCAACCCTCAGAACCCAGGTTTCAATG
ATCGCAGGCTTCGCCCGCATATAATTAAACTCCCCAGACCCTGTCCCGGA
GTCTGAAAAATTCGCCTGCAAGGTTACAAAAACAAGCATGGCCTCATTTC
GTACACCCGACTTCGATCGCCGATTTTATCCCTTGACCCACCTACATTGG
ACTGCCGATTCGACCTACAGCCAGAACACTGTACACCACACCCCCTACAC
TTTTCTCCCTTTTGGTATTAAGTACCGGTATTAATCATTAATCATTAATA
GTGGAGTTGTGCGTGACAACACAGTGGTGGTACGGATGGACCCATGCAGT
TGAGCTTGATTCTGCGGCATCACCCTTTGAGGTTGCCATGACAGCGCCGT
CAACACGATGCTCTCCGCAGCCTAGCATTTGAGTATAATACCAGATTCCC
CACCACAGTAACCTTACAAAGGACCTATGCACTTCCCGGTCCGCGGTTGT
CCGCGATGGTCACCCCCTGAACCACAAGCCGTGTCCTGCTCCACGTCCTG
GGATGGCTGGGGTGGCTAGAGAATAATGACGAAATACAACGGAATAACAA
TTGGAAAAAATTAGAAAAGCCCACAAATTATTGCGACCCAGAAACACAGT
AGTGATTTGGTAGCCTGTAGCTATGCTTGAGCTGTACGCCTCGGACTACC
GTCGAGGCTTACGGCATTTATCTCATTCATGAGATATTACTTCCTGTGTT
TGGAGTTTGGATCTTTGCTTCAGACAAGTAATATAGTGCTACTTGATACT
CCGTACAAAGAGTACTAAAGTCCAAAGGTTGCTCTTACCTGAATTTCCGT
AGCTGGGCTGTACTGTGGAGAGCTGATGAAAATGGAAGCGGGAGTCGGAC
TAGAAGCCGGCACGAAAGCAACCTTCGTATAAAGTTGCACTAGTCTGAAG
CAAAGGTCCAAACTCCAGACACGGGAAGTAATATCTCGTGAACTAGAGAT
AATATCACAAGCCTCGACGGTAGTCCGAGGCGTACAGCTAAAGCATAGCT
ACAGGCTACCAAATCAGTACTGCTGTATATTTACTTACTATTTAAACAGC
TAGCATCAAGAGAAACAGAGCTCATGTTGGTGAAGACCGGCAACTATGAG
CACGCGTTTTTTTTCATGATAAGGTGTGTCAAACGATAACTGAAAAGTTC
CTCTCCGGAAAGTTCCGATTGCCGTTGCTAGTGCCGCCGGTACTTTCAAC
ATGCCCGCTTCATACAGTACCAATAGTGGATGCGAGAAAGAGAGGCGCAC
ATTAATTGGTCCATTGTGATCTGCCAAGGCAGCACTCGTTCGGAACTACC
TTGAGGTTTACTGGCCCTGCGCCGGCGGACTCTCGGCTGTGAACTTCATC
GGTACGCAATTGCGTGACCCGATAAACTCGAGACTGTCCCGATGGCGTAT
GGCGGTTTCATAAATGGACGCCGTCGCGGAACTCGGGAGGAATCCCGTGA
GTAAGCACCAGATCAGCCTGAGTATGGAGATGAGCAGGCTCACGCGGGAC
GGGACTGCCGAACCCATCTCGCGAGACCAAACTCTCAGGCGCGAACGCGG
ACGGGAAATATTATTTTCCTTGTCCAGCTGAACACGAGCAGGATTGGCAA
CCTGACCCGGTTGAACCATACTCTAGCTATGTGTTTGACCATACATCCAT
AAACAAATCAACCTTACACTGTTAACAGTGAACCTCTTTCACGCCGCAAA
AGTACCCTAACCCCTAACCCTCATATCATATATGTGTTCGGCTTTCTCCC
GCAGGGCGGACCTGGACAAACTTGCCAAGGTAGTGCAAATTTTCCCCACG
AGGAGCAGGCGGTCGCTCCAAAGGGCGCTGGCTAACACCGAAGGTAACAT
CATGGCCGCGGTGGACTTTCTCCTCTCGGAACGCGGCCGTCGCGGCGTCG
AGCCCAACGATGGCGCCAGGGCCGCGGCCGGATCTGGGTTGATAACATCA
GAAGCTGCCCGTCCCTCACAGGCGTCAGACAGGCCCCCGGGGACAAGCCG
TAGCACTGGAGAAGAATTGATTTGCGGTCTTGTCTCCCTCCCTCTAGAGC
GCGACGGCGCCGCGTTTGGAGGAAGCACCAGCGGCGGACCTGCGAACGAT
AGCGCCCGTGACCCCGATGCAGTTGGCCTCCGGCCTGAGTCCCGCCCGTC
TTCTGCCTCCGCGGCGGCTGGTCTATTTCGGCTTTCGTTCGGGCGCACGC
GTCCCAGAGACGCAGAAGCGGTGAGTGGCGCGACTTCTTCGCAGGCACCC
CAACTTGCTGCGGTGACTGCAACGGGCGGTGCAACGGGCGGAATCGTTGG
CGGTGGAAACCGATCCGCGGAAGGAATACGATCAATGGCAGTGATGGTCG
ATGAAGAGATGGGAACATCGTTCTCTCAACAAGTTGGCATGGCGATTGCT
AGAGCGCTACAACAACGATCGTCGCCCGAGCCTTCCAGCGATGCGGCGGA
ACTGCACCAGAGGCTAGGGGATACGACGGCGTCTCCCTGCCCTCCCGGGA
GACTAGAGGCGAACGTTTAAGTCTGTCTTGGCCTGGCGCGGCGCCGGATG
TTGCTCCGAAGTTTCGTAGGCGAGATCCTTCAGCTGCAGCTACCTTGGCT
CCTCAGGCTGCTCGAAAGGTTCCTGGTTGGACGCATGATCGGGGCACGGT
GACGCCCAACTACGTTATCCGTACCGCCTCGGCAACAGCCAACCATGCCT
TGGTCGTGTCAAGCTCAGGAAATTCTGGCTCCGGAGACGATGAGTCTAAA
GACGTCAGAGTCTAGCGTAATCACCCGCCCCTGAATAGGCTTCTACGGTG
TTAGATCAAGACACGACGTCTCAAGCAGTGGGCTCTCGCGAACCTGCTGT
ACAGTGTAAAAAACAAACTGCGGCACGTAACGGAGGACGTACATGCGCGT
GTGTTGTGCGGATATAGAGGTGGTACAGGGCTTGGAATGAGCTTTAAGGG
AGACGTTTTGAGTTTCACACTCTCATAAGAAACGCCTGTTTCGGAAGTTT
CGTTCTTGCAGCTATGGTATTGCTGTAGAAAGGCTTCGTATCAGAAGGGT
CGTCTCTGGTATTGCGGTAGACTGACTATAATAATGGTACTGCTTTGTTT
GCGTATACACTGTTTTGATATATACTCACTAAGAGGCGGGCAGGGCATCG
ACGGCTTAAAGCGTCGCTGCGTATATAGGGGCTGTGTTTGCTCCCTAGGG
CGGCAACCATCAGGATCGTGTCGCACGCTCGTTGGGCCCTTGCCCTATCC
CCCAGCAGACAGTTTCTCAAGTTGGCGAGCCTTGGTTCCTCTTTAGGGGT
GTGCACGTTCAATGGGGCCCCGGCTGTGTTTTACGTAGAAGAAGCCAAGT
GGTAGTGATAATACATCTGTAGGGCGGTTGGATGAGTTCCTTTGGCTGAA
ACGCTCGAGTACCTAGAACGTTTCAAGGTTTTCGTTAATATTTCGTGTTT
CGTGGGTTCGTCATTATTTCCGGTAGGCGCTTTCATCATTTCATGTGTAT
CATGATGCGTAAATGTAAGTGAGATGCTATGGAGGAAGCTCCAGCTGATC
GAGTTGGCGGTCTCAACTCGTGTCACCTTTGCGATAACGCCTCCTTCGGG
AGTTGCTACGAGTAGATATTCCAACATTAGTCTGGCATTTTTGTAACCTT
GTATGCATATTTCAGTTTCGAAGTTTTGTAGTTTTTATAATATCATGGGC
GGATAATCGAGGCACCTACAAATGAAAAAAAAAATGGTAATAGTGTTTTT
TTCAGCAAGTAACCCAAGAGCGGAGACTTGCCCAAAATAGTGTGTGTGTG
TCATCACAATGATTGGTGGAGGAATCGGCAATAGAAAACTTCCCTTTTGT
AATCGGGTGGACTGACGAAATTGAGCGCGCTTTCAAGTAATCGCTGCCTT
GGGTAGAGAACGAGCTCTTGGTATGGGATGGACAGGCGTTGAAACAGTAT
CGCTTGCATGTCGTGTTTTGACTGAGACCAGACGGGATGGGACGGCGTTG
CCGGGCAAGAACATATGTCGCCTCGAGATAGAATCAGTCATCCGCCCTGA
TGACGTTCGAGATGCCGAGATGTCAAGACCATCGACGGTTTACGAATATG
TGGGTGGGATGTGGGGTTCCATCAGCCAGCGGGGATATCGATATTCTGTC
CCCGCCCCCGTTCTTCAGCCGGCTGTTGTGAAAATCCCAATCACTGTAAT
AGTGTACGTAGGGAAGATCATTGTCGTGTGTTTCTTGGCATTCACGACCC
CATTTTCCAAAGTACTTTGTGGGTCGTGTCGTAGAATCATTATATTTCTC
TCTACTCTTTTATTTTAGTTTTGGATTGTAGAAGTTGATGTTGTTAGTGA
AGTATACCGTACCTGCCAGACTTTTGTTGTTGCATTGAGTTGGGACTTCA
CACCAACCTATGACATGAACCATTGTTGGTGTTGAGAGTGTATGTTATTC
ACCCTTCCTTTTCATTATTACGAAGATGAAAAGTATATCACAATGCTTGG
ATCGAGTGTTTTCGGAGCTTGAGGTATCTCTTTTTTTTTTAGATTTTGAA
TCCTCTTCGGATTAAGAGAAAAAAAAATGTAATTAGAAGCTTTCGTTTCG
TTTGCCC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig9:1539814..1551220-

>mRNA_A-nodosum_M_contig9.79.1 ID=mRNA_A-nodosum_M_contig9.79.1|Name=mRNA_A-nodosum_M_contig9.79.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1527bp|location=Sequence derived from alignment at A-nodosum_M_contig9:1539814..1551220- (Ascophyllum nodosum dioecious)
ATGGCTGAGACATTGCGACACGCTCGAACGCTCGTAGCTTTACGAGACCT
GACGCGGAACCTCTGCCGAGATCCCGAAACCGTGCAGGCAGAGGCTGAGC
GGGAGCGCCAGCGTGCGCTGGCGGAGGCGGTGGTCAGGAACCTGAACACG
CACGAGCTGGTGGCCATCGCGTCAGGGAGAGTCCCAGCGGGCCTCGCGGC
CAATGGAGAGCAAAGGGCAGGCGTCAGCGAGGAAACCCGACAGTCGTTCA
TCAAGATTTCGGCGGGGAAGGGAGGCTACGTTCCCAGCAAGGCCGTCACC
GACTCCCCCAGGCCGACCTTGAAAGCAGGAAATCTCGACACGGGAAACAT
CGCCGCGGGAAGCTCGCCCGACCTTGAGAGCGGGCTCCCAGCTCGTGATG
CTGCCCGGCCGAAGTCGGCTTGTGTTGTCTCGGCAGAGCAATCGTGCCCG
GAGTCTCACCTCCCTGGCAGTGCCGCTCCTGGCGAAGCCTTGCCATCGCG
ACAGGATTCCGAAGGGGTAGCCGCGCTGGGCAGTGTTTCTCCTGAGGAGG
CGTGGGCTTCGAAGGGGAAAGGGAAAGCTACCGGGGCCGCGGATTCGGTG
AAGGAGACTGCGCCCGGGTCGTACTCGGACAATTCATGCTCGGTGTGTCT
CGAAGAGTACGAAGAGGGAAAACAGCTGCTGCAGCTGACGTGCGGTCACG
TGTTCCACCACTCTTGCATCGACCTCTGGCTCATGAGTCACCGCGTCTGC
CCGTGCTGCAGGGCGGACCTGGACAAACTTGCCAAGGTAGTGCAAATTTT
CCCCACGAGGAGCAGGCGGTCGCTCCAAAGGGCGCTGGCTAACACCGAAG
GTAACATCATGGCCGCGGTGGACTTTCTCCTCTCGGAACGCGGCCGTCGC
GGCGTCGAGCCCAACGATGGCGCCAGGGCCGCGGCCGGATCTGGGTTGAT
AACATCAGAAGCTGCCCGTCCCTCACAGGCGTCAGACAGGCCCCCGGGGA
CAAGCCGTAGCACTGGAGAAGAATTGATTTGCGGTCTTGTCTCCCTCCCT
CTAGAGCGCGACGGCGCCGCGTTTGGAGGAAGCACCAGCGGCGGACCTGC
GAACGATAGCGCCCGTGACCCCGATGCAGTTGGCCTCCGGCCTGAGTCCC
GCCCGTCTTCTGCCTCCGCGGCGGCTGGTCTATTTCGGCTTTCGTTCGGG
CGCACGCGTCCCAGAGACGCAGAAGCGGTGAGTGGCGCGACTTCTTCGCA
GGCACCCCAACTTGCTGCGGTGACTGCAACGGGCGGTGCAACGGGCGGAA
TCGTTGGCGGTGGAAACCGATCCGCGGAAGGAATACGATCAATGGCAGTG
ATGGTCGATGAAGAGATGGGAACATCGTTCTCTCAACAAGTTGGCATGGC
GATTGCTAGAGCGCTACAACAACGATCGTCGCCCGAGCCTTCCAGCGATG
CGGCGGAACTGCACCAGAGGCTAGGGGATACGACGGCGTCTCCCTGCCCT
CCCGGGAGACTAGAGGCGAACGTTTAA
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