mRNA_A-nodosum_M_contig9.32.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig9.32.1
Unique NamemRNA_A-nodosum_M_contig9.32.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE)

HSP 1 Score: 475 bits (1222), Expect = 1.680e-154
Identity = 311/676 (46.01%), Postives = 370/676 (54.73%), Query Frame = 3
Query:  330 DELGIIFSVPPQSSSTGDVKPDTADQQEGTLT------EPQFIARGHKLGVSVHAIHPLINEARAAFPAAREAYLR-------------EKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVY--SDVRQEIKLLDLVFTKHAKSPNAWAHRRWCWRNDERFGKRQQRAGA-WRPLDVEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRA---AGASKDSE--NHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAFSYPL-VASNLDFVEKERSSNSTLIRDYPGHESLWCYRRFICQTFLAVAPSQGLVECSGHLAERSGASCSESSRDCLHEAEVGSGNDGSASHHETEVETASNERYDWSRWRHAGVEWYNGCLRAE--AAAREGSXXXXXXXXXXXXXXXXXXDQPDYELADGDLGGAPPNGGMLAKFLGREIRFAFKCATDEGAWQFQLQRKHSLIHLAFVSYAADRILRRERIE-----------------SEQIYDRLGARMIPGTQHR------ELEDVTEGCTAYCEITGAPKIAFPLFCTTAD--SCGELRVEEDDERG--GNDVV--------------------RCLRALRELNGFVCGLARGDVLETQRSSN--GGTVAIPYELQ 2120
            +ELGIIFSVPP  +  G    D A  +E TL+      EPQFI + HKLGVSVH+IHPLINEAR AFP  R  Y R             E++A  ++G    L+  A AA   LLSVTRALLLVNADH SAWN RK+L  DG+   S + QE+KLL+L+FTKHAKSPNAWAHRRWCWRN+ERF  R + AG+ W  LDV+EEL VCQRVA+LYPKNYYAWTQRSWVVLR VG A   AGA ++            A  LL+RE+EFVDRWL SHVSDHSALNHRKNV SA AA S      + L  V+KERS+NS L+RDYPGHESLWCYRRF+CQ  L  APS      +G  A                                          YDW  W  A  EW +GC+R +  AAA E S                  ++ D+E A+G L GAP  GG+LA FLG+E RFA KCATD+GAWQF  QR+H+L +LAF+SYA DRI+   R                   +  I   +GA    G++        E E    GC  YCE+TGAPK+ FPL    +   S  E   E DD R   G DV                       +RA R LN FV GLA+ D  +     N  GG    PY ++
Sbjct:   21 EELGIIFSVPPPPTPAGPPA-DAACSEETTLSSADVAPEPQFILQEHKLGVSVHSIHPLINEARGAFPVTRREYRRLRQAHSSRERMPSEESAKPKEGRGGALSDLAVAAGT-LLSVTRALLLVNADHASAWNTRKQLVVDGLCEGSSIPQEVKLLNLIFTKHAKSPNAWAHRRWCWRNNERF--RARHAGSTWHQLDVQEELNVCQRVAELYPKNYYAWTQRSWVVLRAVGGARAEAGAGQEGSPGKDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQVRLVTAPSS----VTGPTAAXXXXXXXXXXXXXX---------------------XXHRGLYDWEAWGRAVTEWNDGCVREDDKAAAVEDSDEDLEQEHEDTTAT----EEADFEEAEGALPGAPSGGGLLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSYAIDRIVAGSRHHXXXXXXXXXXXXXXXXGNNIIQQPVGAAGFGGSRRGVAGHVGEAEVTAGGCLTYCEVTGAPKLTFPLALLPSPEASVDERGREGDDTRSNVGGDVAGRGSGGGACPSSGVVAAEESAAVRAFRALNMFVSGLAKADANDNAVGKNRCGGGGIAPYTME 663          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 4.040e-150
Identity = 318/679 (46.83%), Postives = 373/679 (54.93%), Query Frame = 3
Query:  327 SDELGIIFSVPPQSSSTGDVKPDTADQQEGTLT-------EPQFIARGHKLGVSVHAIHPLINEARAAFPAAREAYLR-------------EKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVY--SDVRQEIKLLDLVFTKHAKSPNAWAHRRWCWRNDERFGKRQQRAGAWRPLDVEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRA-AGASKDSENHAAETL----LAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAFSYPL-VASNLDFVEKERSSNSTLIRDYPGHESLWCYRRFICQTFLAVAPSQGLVECSGHLAERSGASCSESSRDCLHEAEVGSGNDGSASHHETEVETASNERYDWSRWRHAGVEWYNGCLRAE--AAAREGSXXXXXXXXXXXXXXXXXXDQPDYELADGDLGGAPPNGGMLAKFLGREIRFAFKCATDEGAWQFQLQRKHSLIHLAFVSYAADRILRRERIESEQIYDRL------------------GARMIPGTQHRELEDVTE-------GCTAYCEITGAPKIAFPLFC-----TTADSCGELRVEEDDERGGNDVVR--------------------CLRALRELNGFVCGLARGDVLETQRSSN--GGTVAIPYEL 2117
            S+ELGIIFSVPP  +  G    D A  +E T +       EPQFI + HKLGVSVH+IHPLINEARAAFP AR  Y R             E+++  ++G    L+  A AAA  LLSVTRALLLVNADHGSAWN RK+L  DG+   S + QEIKLL+L+FTKHAKSPNAWAHRRWCWRN+ERF  R      W PLD +EELKVCQRVA+LYPKNYYAWTQRSWVVLR VG A A AS   E    E       A  LL+RE+EFVDRWL SHVSDHSALNHRKNV SA AA S      + L  V+KERS+NS L+RDYPGHESLWCYRRF+CQ  L  APS      +             S +D                             YDW  W  A  EW++GC+R +  AAA E     XXXXXXXXXXX    ++ D+E A+G L GAP  GG LA FLG+E RFA KCATD+GAWQF  QR+H+L +LAF+S+A DRI+                                GA    G+       V E       GC  YCE+TGAPK+ FPL        +A + G    +     GG                          +RALR LN FV  LA+ D  +     N  GG    PY +
Sbjct:   31 SEELGIIFSVPPPPTPAGPPA-DAACPEETTPSSTDDVAPEPQFILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRRAHSSLERMPSEESSKPKEGRGGALSGVAVAAAT-LLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWCWRNNERFRARHADI-TWHPLDEQEELKVCQRVAELYPKNYYAWTQRSWVVLRAVGGARADASAGQEGLPGEDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVTAPSSVAGPAAXXXXXXXXXXXXXSDKD-------------------------RRGSYDWEAWGRAVTEWHDGCVREDDRAAAAE----DXXXXXXXXXXXTTATEETDFEEAEGALPGAPSGGGPLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLSHATDRIVLGSHXXXXXXXXXXXXXXXXXXXXXXXTQRPAGATGFAGSCKDVAGHVGEAESTAGGGCLTYCEVTGAPKLKFPLALLPSPEASAHAGGPAGHDSRGSVGGXXXXXXXXXXXXXXXXXXXXXXXSAAVRALRALNLFVAALAKADADDHAVGKNRCGGGGIAPYTI 677          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A0P1AIY7_PLAHL (Protein geranylgeranyltransferase type II, alpha subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIY7_PLAHL)

HSP 1 Score: 135 bits (341), Expect = 1.290e-30
Identity = 103/336 (30.65%), Postives = 153/336 (45.54%), Query Frame = 3
Query:  330 DELGIIFSVPPQSSSTGDVKPDTADQQEGTLTEPQFIARGHKLGVSVHAIHPLINEARAAFPAAREAYLREKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVYSDVRQEIKLLDLVFTKHAKSPNAWAHRRW-----CWRNDERFGKRQQRAGAWRPLDVEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRAAGASKDSENHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNV---------VSAFAAFSYPLVASNLDFVEKERSSNSTLIRDYPGHESLWCYRRFICQTFLAVAPSQGLVEC 1295
            DE+G++F +        D+ P+TA           F    HKLGV+  A  PL   AR  F     A  +EK     Q N  D   RA     +L+  TRA+LL++AD  +AWN RK     G + +   EI+  +LVFT H KS + WA+RRW     C  + E              +    E++VC R+A+  P+NY+AW+ R W+V +                    L   L  +EL+ ++RW ++H++DHS  NHR++          +S     S  L+ +   FV       S ++  YP HE+LWC+RR++ Q  L   P      C
Sbjct:   19 DEVGLLFGI-----EARDLTPETA-----------FTLENHKLGVAFAAGKPLFQAARLQFHVLN-ARFQEKVTEITQSN--DNEQRA-----QLVHCTRAILLISADFYTAWNTRKLFVTRG-WLNAHDEIQFTNLVFTLHPKSIDTWAYRRWLANLVCQSSSENDNL----------IFYSREIEVCSRLAEQKPRNYHAWSFRHWIVSQ--------------------LPVVLTLQELKDMERWCRTHITDHSGWNHRQHTLNELIKKYRISGHENLSKELILTEYKFV-------SEIVTLYPSHEALWCHRRYVMQRLLDELPRTETAIC 292          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A329SYY2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SYY2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.630e-29
Identity = 96/321 (29.91%), Postives = 153/321 (47.66%), Query Frame = 3
Query:  330 DELGIIFSVPPQSSSTGDVKPDTADQQEGTLTEPQFIARGHKLGVSVHAIHPLINEARAAFPAAREAYLREKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVYSDVRQEIKLLDLVFTKHAKSPNAWAHRRWCWRNDERFGKRQQRAGAWRPLDVEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRAAGASKDSENHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAFSYPLVASNLDFVEKERSSNSTLIRDYPGHESLWCYRRFICQTFLAVAPSQGLVE 1292
            DE+G++F +      + D+ P+TA           F+   HKLGV+  A  PL   AR  F     A L+++ A   Q    D   R+     +LL  TRA+LL++AD  +AWN RK     G + D + E++  +LVFT H KS + WA+RRW           +  +G    +  E++++VC R+A+  P+NY         V                    + L  +L ++EL+ ++ W ++HV+DHS  NHR++ ++            +L  V  E    S ++  YP HE+LWC+RR++ Q FL   P   + E
Sbjct:   22 DEVGLLFGL-----ESSDLTPETA-----------FVLEDHKLGVAFAAGIPLFQAARMQFHPLN-ALLQQEAAEITQSK--DNQRRS-----QLLHCTRAILLISADFYTAWNTRKSFVTRG-WLDAQDEVQFTNLVFTLHPKSIDTWAYRRWL-----AIRLCESLSGEELRVFYEQQIEVCSRLAEQKPRNYXXXXXXXXXV--------------------SCLPMDLARKELQDMEHWCRTHVTDHSGWNHRQHTLNELMKKCRDAGEVDLSLVLPEYKFVSDIMASYPTHEALWCHRRYVMQCFLNEVPRNAISE 292          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A7S4DGU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGU3_HETAK)

HSP 1 Score: 132 bits (332), Expect = 2.090e-29
Identity = 102/352 (28.98%), Postives = 150/352 (42.61%), Query Frame = 3
Query:  330 DELGIIFSVPPQSSSTGDVKPDTADQQEGTLTEPQ-FIARGHKLGVSVHAIHPLINEARAAFPAAREAYLR------EKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVYSDVRQEIKLLDLVFTKHAKSPNAWAHRRWC--------------------------WRNDERFGKRQQRAGAWRPLDVEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRAAGASKDSENHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAFSYPLVASNLDFVEKERSSN-------------STLIRDYPGHESLWCYRRFI 1247
            DE G+IF                  ++EG   E + FI   HKLG+S+  + PL  E+R AF   R  +         KT   R G               L+  +RALLL+N D  +AWN RKEL   G Y D + E+K LDLVFTK AK P++WAHR WC                          W+  +   +++++  A      + E   C  V D YP+NYYAW  R+   LR+V    G + D++            +  E+    RW++ HVSD+SAL +R   + A    +      N +   +   ++             S  + ++PGHE  W +RR +
Sbjct:   59 DEYGLIFG-----------------EEEGMEGEAKGFILIDHKLGISMSILQPLYRESREAFCILRRQWNGGQPVGGRKTGLRRPGRMA------------LVQSSRALLLLNPDQYTAWNTRKELILGG-YLDAKDELKFLDLVFTKQAKKPSSWAHRSWCMDYIAKEELVKIDAVVEVGVPPEASAWQLQQDQEQKKEKMVAQLIEIADGEFSTCSLVCDRYPRNYYAWRHRA-AALRLVAGGRGQAADAK------------VLEEMRATTRWMRRHVSDYSALTYRLGALVAVVQQTRAWDRLNRETYREVGGASCEHELLFGALARSSLWLDEFPGHEGFWLFRRSV 367          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A067CUI7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUI7_SAPPC)

HSP 1 Score: 130 bits (326), Expect = 3.920e-29
Identity = 92/283 (32.51%), Postives = 139/283 (49.12%), Query Frame = 3
Query:  435 FIARGHKLGVSVHAIHPLINEARAAFPAAREAYLREKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVYSDVRQEIKLLDLVFTKHAKSPNAWAHRRWCWRNDERFGKRQQRAGAWRPLD---VEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRAAGASKDSENHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAFSYPLVASNLDFVEKERSSNSTLIRDYPGHESLWCYRRFICQTFLAVAP 1274
            F+ + HKLG+++  +  L  EA+  F AAR            + N VD          R+   TR +LLV AD  +AWNARK+L   G+ S +R EI  +++V + H+KS + WAHRRW             R  A  PL    + +EL +C R+ + YP+NY+AW+ R  V   +   A                    L +EL+    W + HV+DHS  NHR+ +++        L +  L  +E E + ++ L+R +PG E+LWC+RR +   FL  AP
Sbjct:   35 FVLKDHKLGIALDMLPALHREAKDVFFAAR------------RSNDVD----------RIREATRCMLLVCADFYTAWNARKQLLVQGLLS-LRDEITFINVVLSHHSKSIDTWAHRRWVL----------DRLVATTPLTASFLSDELALCLRLTEQYPRNYHAWSYRYRVCCHLSPAA--------------------LVQELDTNRAWCERHVADHSGWNHRQLLLARL------LPSETL--LEDEFAFHTPLLRLFPGREALWCHRRALLHAFLTTAP 256          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: D0NLL1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLL1_PHYIT)

HSP 1 Score: 130 bits (327), Expect = 9.050e-29
Identity = 95/316 (30.06%), Postives = 148/316 (46.84%), Query Frame = 3
Query:  330 DELGIIFSVPPQSSSTGDVKPDTADQQEGTLTEPQFIARGHKLGVSVHAIHPLINEARAAFPAAREAYLREKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVYSDVRQEIKLLDLVFTKHAKSPNAWAHRR-WCWRNDERFGKRQQRAGAWRPLDVEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRAAGASKDSENHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAFSYPLVASNLDFVEK----ERSSNSTLIRDYPGHESLWCYRRFICQTFL 1262
            DE+G++F +                +     TE  F    HKLGV+  A  PL   AR  F        +E     +     + + R A    +LL  TRA+LL++AD  +AWN RK     G + D + E++  +LVFT H KS + WA+RR    R  E   + +           E++++VC R+A+  P+NY+AW+ R W+V R                    L   L ++ELE ++ W ++HV+DHS  NHR++ ++      Y   +  +D   K    E    S ++  YP HE+LWC+RR++ Q  L
Sbjct:   22 DEVGLLFGI----------------ESSDLTTETAFFLEDHKLGVAFAAGIPLFQAARTQFHPLNALLQQEAPEITQ----FEFSERRA----QLLHCTRAILLISADFYTAWNTRKSFVSRG-WLDAQDEVQFTNLVFTLHPKSIDTWAYRRSLAIRLCESLSEEELHNF------YEQQIEVCSRLAEQKPRNYHAWSFRHWIVSR--------------------LPLGLARKELEDMEIWCRTHVTDHSGWNHRQHTLNELLK-KYRRDSGEVDASHKVLLAEYKFVSDIMASYPSHEALWCHRRYVIQYLL 285          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A6A7GFL8_9CRUS (Protein prenyltransferase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GFL8_9CRUS)

HSP 1 Score: 130 bits (328), Expect = 9.860e-29
Identity = 107/348 (30.75%), Postives = 150/348 (43.10%), Query Frame = 3
Query:  330 DELGIIFSVPPQSSSTGDVKPDTADQQEGTLTEPQFIARGHKLGVSVHAIHPLINEARAAFPAAREAYLREKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVYSDVRQEIKLLDLVFTKHAKSPNAWAHRRWCWRNDERFGKRQQR-----AGAWRPLDVEE---------ELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRAAGASKDSENHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAFSYPLVASNLDFVEKERSSNST----------------------------LIRDYPGHESLWCYRRFI 1247
            DELG++           D K   +   +G    P FI R HKLG+S   +  L   A   F +       +   C      V+++T      + +   TR +LL+NAD   AWN RK L +         EI+ ++LVF+KH KS  AW+HRRW  R  + F  R  +     +      +V++         E+++C +VA++YPKNYYAWT R W+V            D E            L++EL  V RW   HVSDH   +HR+ V+      S       L   ++  SSNS                             +IR YPGHESLWCYRRF+
Sbjct:   37 DELGLVVRASELLFGGNDSKESDSAADDGK--GPPFICREHKLGISSWCLPDLYRFATNLFLSLIANIDFKSLQCLHN---VEIST-----VKEIHDSTRIILLINADSYRAWNVRKFLIQ-AFRLKTDDEIRFMNLVFSKHPKSGEAWSHRRWVLRQVKDFESRNSKQLSDVSSQPHSSNVDDFVRNDHFSTEIRICAQVAEIYPKNYYAWTHRQWLVKLF---------DFEE-----------LKQELRRVSRWNDLHVSDHCGFHHRQFVLLCCLERSKLHSGIVLKDFDEGNSSNSDQFHHEKLESSEDCEFCEIFREEFVYLSDMIRRYPGHESLWCYRRFL 353          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A1V9YKS2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKS2_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.290e-26
Identity = 93/317 (29.34%), Postives = 145/317 (45.74%), Query Frame = 3
Query:  327 SDELGIIFSVPPQSSSTGDVKPDTADQQEGTLTEPQFIARGHKLGVSVHAIHPLINEARAAFPAAREAYLREKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVYSDVRQEIKLLDLVFTKHAKSPNAWAHRRWCWRNDERFGKRQQRAGAWRPLDVEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRAAGASKDSENHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAFSYPLVASNLDFVEKERSSNSTLIRDYPGHESLWCYRRFICQTFLAVAPS 1277
            SDE+G+I+   P  +                     F+   HKLGV++  I  L  EA+ AF + R+                          +R+L  +RA+LLV AD  +AWNARK+L  DG Y  + +EI+ +++V + H+KS + WAHRRW              A   +PL +E+EL +C R+ + YP+NY+AW+ R  +                 H     L    L  EL+    W + HV+DHS  NHR+ ++         L   N   +  E + ++ L+R +P  E+LWC+RR +   +L   P+
Sbjct:    6 SDEVGLIYLEDPSEA---------------------FVLEDHKLGVALDMIPALHREAKEAFFSGRKTN----------------------DPQRVLEASRAMLLVCADFYTAWNARKQLITDG-YLGLLEEIQFMNVVLSHHSKSIDTWAHRRWVLTRLVAATP----AAVLQPL-LEQELALCLRLTEQYPRNYHAWSYRYCIC---------------GH-----LPPGALLGELQQNRSWCERHVADHSGWNHRQLLL---------LRLVNPSLLADEIAFHTPLLRMFPDREALWCHRRALLHGYLQTVPA 244          
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Match: A0A6A3NN97_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NN97_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.470e-25
Identity = 99/321 (30.84%), Postives = 149/321 (46.42%), Query Frame = 3
Query:  330 DELGIIFSVPPQSSSTGDVKPDTADQQEGTLTEPQFIARGHKLGVSVHAIHPLINEARAAFPAAREAYLREKTACERQGNAVDLATRAAAAAERLLSVTRALLLVNADHGSAWNARKELARDGVYSDVRQEIKLLDLVFTKHAKSPNAWAHRRWCWRNDERFGKRQQRAGAWRPLDVEEELKVCQRVADLYPKNYYAWTQRSWVVLRIVGRAAGASKDSENHAAETLLAKNLLQRELEFVDRWLKSHVSDHSALNHRKNVVSAFAAF-----SYPLVASNLDFVEKERSSNSTLIRDYPGHESLWCYRRFICQTFLAVAPS 1277
            DE+G++F +        D+ P+TA           F    HKLGV+  A   L   AR  F A   A L+++ A      A D   RA     +LL  TRA+LL++AD  SAWN RK     G + D + E+K  +LVFT H KS + WA+RRW           +  +G    +  +++++VC R+A+  P+NY           R                    L  +L  +EL+ ++ W ++HV+DHS  NHR++ ++              V  NL   E +  SN  ++  YP HE+LWC+RR++ Q  L  A S
Sbjct:   22 DEVGLLFGI-----EQSDLTPETA-----------FFLDEHKLGVTFAAGIQLFQAARTQFHALN-ALLQQEAADIT--TAEDNGRRA-----QLLHCTRAVLLISADFYSAWNTRKSFVTRG-WLDAQDEVKFTNLVFTLHPKSIDTWAYRRWL-----AIRLCESLSGDDLRVFFDQQIEVCSRLAEQKPRNYXXXXXXXXXXSR--------------------LPLDLTLKELDAMETWCRTHVTDHSGWNHRQHALNELTKRYRGDGDVDDVVRNLVLAEYQFVSN--IMAPYPTHEALWCHRRYVVQRLLQQATS 290          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXA5_9PHAE1.680e-15446.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9E1_ECTSI4.040e-15046.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0P1AIY7_PLAHL1.290e-3030.65Protein geranylgeranyltransferase type II, alpha s... [more]
A0A329SYY2_9STRA1.630e-2929.91Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A7S4DGU3_HETAK2.090e-2928.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A067CUI7_SAPPC3.920e-2932.51Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
D0NLL1_PHYIT9.050e-2930.06Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A6A7GFL8_9CRUS9.860e-2930.75Protein prenyltransferase (Fragment) n=1 Tax=Hiron... [more]
A0A1V9YKS2_9STRA1.290e-2629.34Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6A3NN97_9STRA1.470e-2530.84Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9contigA-nodosum_M_contig9:672226..677645 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G9E1
Preferred namePTAR1
PFAMsPPTA
Model size2396
Max annot lvl2759|Eukaryota
KEGG koko:K14137
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005968,GO:0006464,GO:0006807,GO:0007275,GO:0007423,GO:0008150,GO:0008152,GO:0009987,GO:0018342,GO:0018344,GO:0019538,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048513,GO:0048731,GO:0048856,GO:0071704,GO:0097354,GO:1901564,GO:1902494,GO:1990234
Exons6
Evalue1.97e-17
EggNOG OGsCOG5536@1|root,KOG0529@2759|Eukaryota
Descriptionprotein geranylgeranylation
Cds size513
COG categoryO
BRITEko00000,ko01006
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9.32.1prot_A-nodosum_M_contig9.32.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig9 676334..677396 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870332.7249281-UTR-A-nodosum_M_contig9:672225..6729531680870332.7249281-UTR-A-nodosum_M_contig9:672225..672953Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9 672226..672953 +
1680870332.737811-UTR-A-nodosum_M_contig9:674526..6746731680870332.737811-UTR-A-nodosum_M_contig9:674526..674673Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9 674527..674673 +
1680870332.7529643-UTR-A-nodosum_M_contig9:674930..6750801680870332.7529643-UTR-A-nodosum_M_contig9:674930..675080Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9 674931..675080 +
1680870332.763372-UTR-A-nodosum_M_contig9:675298..6754101680870332.763372-UTR-A-nodosum_M_contig9:675298..675410Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9 675299..675410 +
1680870332.7757795-UTR-A-nodosum_M_contig9:675836..6763331680870332.7757795-UTR-A-nodosum_M_contig9:675836..676333Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9 675837..676333 +
1680870334.1318636-UTR-A-nodosum_M_contig9:677396..6776451680870334.1318636-UTR-A-nodosum_M_contig9:677396..677645Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9 677397..677645 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870332.7884586-CDS-A-nodosum_M_contig9:676333..6763931680870332.7884586-CDS-A-nodosum_M_contig9:676333..676393Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9 676334..676393 +
1680870334.1135054-CDS-A-nodosum_M_contig9:676943..6773961680870334.1135054-CDS-A-nodosum_M_contig9:676943..677396Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9 676944..677396 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig9.32.1

>prot_A-nodosum_M_contig9.32.1 ID=prot_A-nodosum_M_contig9.32.1|Name=mRNA_A-nodosum_M_contig9.32.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=171bp
MLAKFLGREIRFAFKCATDEGAWQFQLQRKHSLIHLAFVSYAADRILRRE
RIESEQIYDRLGARMIPGTQHRELEDVTEGCTAYCEITGAPKIAFPLFCT
TADSCGELRVEEDDERGGNDVVRCLRALRELNGFVCGLARGDVLETQRSS
NGGTVAIPYELQPVLSSVPR*
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mRNA from alignment at A-nodosum_M_contig9:672226..677645+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig9.32.1 ID=mRNA_A-nodosum_M_contig9.32.1|Name=mRNA_A-nodosum_M_contig9.32.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5420bp|location=Sequence derived from alignment at A-nodosum_M_contig9:672226..677645+ (Ascophyllum nodosum dioecious)
ATGGTCATCACATATAGCAGAGTATGGATCAACCGGGTGAGGTTGCCAAT CCTGCTCGTGGTCAGCTGAACAGGGAAAATGAACATTTCCCTATTGGTGA TAGCCATACATAAAATACAGCAGACAAACTCGGAGGATCGTACGAGTGTA TGTAGCGGGTACCCAGCACCTGGTCGTAATTAGGATTCGCTGTCGTTGCT TTCAAGGTTCGACGTTGCAAAAACGAAAGCTGAATCCCCACTTTGTATTT TGTTTATCACGTCATCCTGTATCTCACTTTGCACGTATTGTCCTGTCATC CCTTTACAACTCCACCATGACTTGGAAGTGATGAGCTAGGCATCATCTTC AGCGTCCCACCTCAGAGCTCATCGACGGGCGACGTAAAACCCGACACCGC TGACCAACAAGAGGGAACCCTCACGGAGCCGCAGTTCATTGCCCGAGGAC ACAAGCTCGGCGTATCGGTACACGCCATCCACCCCCTCATCAACGAAGCG CGAGCGGCCTTTCCCGCCGCTCGCGAGGCTTACTTGCGAGAGAAGACGGC TTGTGAAAGACAGGGAAACGCGGTGGATTTAGCAACACGAGCGGCGGCGG CAGCGGAGAGGCTGCTGTCGGTAACGAGAGCTTTGCTGCTCGTCAACGCG GACCACGGTTCGGCATGGAATGCCAGGAAGGAGCTCGCGCGGGATGGCGT CTACAGCGATGTACGACAGGAGATAAAGGTAATAATATTCCGTACTCGTT GTACCCCCAGCTAGTCGGCATGTGTGTGTAGTCTTCCCATTTATTCTGGA CGTCAGGCTTGTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACA CAGGATTTCTCATCCACCTTCCTTCTGCGGCGCTTGCCTTCATTTTCCTC GCGAGAAGGATTCGGCCGTTCCTTTCCCTCGTCGACCGTGAAGTCGCATT TTTGTGTACTAACGAATTAATCGTTCTCCACTTGTTGGGCATTTTTATTT TAATACTTTTTGAAAGGAAAAATCCCAGTTCGTGTGACTGCACCGGGATT CGAACTCCCGTCTCAACGTCAGAAGGTTTCGAGGTTACCTTTTGTACCCC ATGATATATAAGGTAGTATAAAATGATGCATCAAAAACGGTCCTAGATTA TCGTCTTTGGCAGTTTTTTTTTGCCAACTTACACGATGGAACAAACCTCA CGACTCGATCTGACAAGCTGTGGTTCCGTTCCACGATGTGTGTTTTCCTC TCTGTACACTACACCATATTTTGCAGCGCTAGAAGGAACTTTTGACAGCA ACTAGATGGAGGGGGGGGGGGTTACTGTTGGATATTTCTATCTTCCAATG AGGCTATTAAACGTACTGTAACAGTCTTACTCCTGAACAGGAACGCTGCC CATCCCTCCTGTAGCCCCATTTAATAATTAATACCTGTGGAATACATTGG ACGGTCGCCCCGGTGGTTCAGTCGGTAACCTCGAAACCTTCTGACGTTGG GACGTGAGTTCGATTCCCAGTTACACGAACTGGGATTTTTCCTTACAAAA ATAAATAAAAATCCCAACAATTAGAGAACGATTAATTCGTTAGTACACAA AATTCGACTTCACGGTCGACGACGGAAAGGAAGGGCTGAATCCTTCTCAC GAGAAAAATCAAGGCAAGCACCGCAGGCGGAAGGTGGATGAGGAATTCTG TGTGACCTCCCTCTTGTGTGACCCCGACTGGTACGTCCAGAATAAATAGG AAGACGACACACACACACACACTTAGATTATCTACATGTATCCAACTTTC CGCGGTCCACGCCTACGGGTTTATTTTTGTCTCAGTGCAGTAGAAACTCC GATGCGTCCATAATATGAAATATCTGTAATTCATATCCACGTTTACCATC ATGGCGCCAAAAGGCTCGTAGCTGTGCTGGAGCGATTCTGCCTGATCATA ATTTTGTCGCGTCATCCCCTGTAGCGCGCGTGACGTAGTCTTACCGAAAT GTGACCCTTGGGACTGCATATTATTTGTTGACTACAGTACAGCAGAGAAT GGCAAGTGATGGTTGATGGATCTTAGGCCTGCTTTCTTTCGTCGTTGTGT CGTACTTATGTTCTAAGCGCTGAAGAAATCTCGTTGAAAGTCAGAATCAT CGATGACCCCAACGTAATGTAAAATGGGTGGCCTCTATAATAGCACAGCG GTGATACCGCATAATGACGCCTGCAAGACGGGTTTCCACGATCGCTGCCC TGCTCGCGGCTCTTCGTTGCCGACCGAACCCGTCGCTACACGCCGTCGCA GCTCCTTGACTTGGTCTTCACCAAGCACGCCAAGAGCCCGAACGCGTGGG CTCACCGCCGTTGGTGCTGGAGGAATGATGAGCGCTTCGGGAAACGGCAG CAGCGGGCGGGGGCCTGGCGCCCGCTGGATGTAGAGGAGGAACTTAAGGT AAGGGTGGAGCGTGTTCTCTGCAGGCACTTGCTCTAGTTTTTTACGGGCC ACAGAGCCTACTTTGGGTATCATGGTAAAGTTCCACACACTATCGTAAGA ATGAGAAACAGTCGTACCTCGAAGACGTTCACGCAGACAGTAACTTTACG ACATGGTCGAGAAACTACACCGCAAATTCTGTGGTACAAATGCCTTTTTT TTTAGAAACCTGTTCCGTTTGAACGCACGCCTACCTGTTCGCTTCTGCCT TAAAGGTGTGTCAAAGAGTCGCAGACCTCTACCCAAAGAACTACTACGCC TGGACGCAACGGAGCTGGGTAGTCCTGCGAATCGTGGGTCGTGCAGCCGG TGCTTCGAAAGACAGCGAAAACCATGCGGCGGAAACGCTGCTGGCAAAAA ATTTGGTGAGTGTACGACCAATTGTAACTTGCGTATAACGTGTATGCCCA TGCCGCTAGCAGGCGGGAATCCCCACTGATTTGCGCTTATGTGGAGAGTA CAGAATCGGGCATAGCACAACTGTAATAACACAGGACATCGGGAGATGGA GAGGGGTTCTTTCATTTTCACAACTCTCCTCTTCCTCCTCCCCACATGTC ATTTTTTTCCGCGCCGCTGGTAGCTTCAACGCGAGCTGGAGTTCGTGGAC CGTTGGCTGAAGAGCCACGTGTCGGATCACTCCGCCCTCAACCACCGCAA AAACGTGGTCTCTGCCTTTGCAGCCTTTTCGTACCGTGAGCGAAGCAATT TACTGTTTTTTGCCTTTCTTTGTAGGGCATAGAGAGACCGTGTTCAAAGG CAATACCAAGATACGACGCTTCAGGCTCAAGAGCTTGAAACTCTGCTTTC GTCACCCGATTGTTTGGCTTCACGATCAAGCGTTAGTTACCCTCTGGGTA AAAGTAAGCCAGATCGAAGTTAGTGCCCGCCTCTGCCCTTCTGTGAGTGT TGACGTACTTTGAGCCTTGAGTGGATGTTGTCCCATGAATGGAGAGCTAC AGCTTGTCTTTGGGGGTTTGTTTTTTTGTGCCACTGCGATGTTCGCAGCC ATGATATAAAAATGAATAATCTACTGCACCCTCTTCTCGCTTCGCCGTTG CTGTGCCATGCTGTCTCTCTTACTCCGACACGAATGGTGTGATCATGATG CCATCTCTCAGCATTGGTCGCGTCCAATCTCGACTTCGTCGAGAAGGAAC GCTCGTCCAACTCCACGCTCATCCGCGACTATCCCGGGCACGAGAGCCTG TGGTGCTACCGGCGCTTCATTTGCCAGACCTTCCTCGCTGTCGCGCCCTC GCAGGGTCTCGTAGAATGTTCCGGTCACCTTGCCGAGCGGTCGGGTGCTT CATGTAGTGAGAGCTCGAGAGACTGCCTGCACGAGGCTGAGGTTGGTTCC GGAAACGACGGCTCAGCAAGCCATCACGAGACTGAGGTTGAGACTGCATC AAACGAGCGATACGATTGGTCGCGATGGCGCCATGCCGGCGTTGAATGGT ATAATGGATGCCTACGAGCGGAAGCAGCTGCGCGGGAGGGATCCTCTTCC GAGTCATCCTTCGAAGAACAAGACGATCACCATGCTGCAGCCAGCGATGA TCAACCAGACTATGAGTTGGCCGACGGAGACCTTGGCGGCGCACCGCCCA ACGGGGGCATGCTGGCGAAGTTTCTCGGACGCGAGATCCGCTTCGCCTTC AAGTGTGCCACCGATGAGGTACTGTTGATATGTAGTAGGGTGCTGTAATA ACTAATACCGCTGTTTTAGTGTGCACGCACGGCAAGGTGCGATATTTTTA ATACATAACGACGCAATTGTACGGTAAGAATTTGTGATGGATAACTCTAT TCCCGCGGACCATAGTTGCATCGATTGTACATTTTAGTACGTATTACTCT AGTCCTGTGTGTGGACACACCTGGACCATCTATCCCATGCCTCTGCACCA CAGTTAAAACGACACTCTTATTCATAGGCAGGCTGGTTGACGTTGCTAGC TCATCCAAAATTTAGCCTATCGGGACCCAACGCGGGCTCTCGGTTTTGCA GGGTGCCGTGTCCATCCTCGGACCACCTCTTTTAATCCAGTAATCGGCGA GCCATTGCCGTAAACTTGACTGCTTTTGATGAGAAAACGCGTTGACGCGT CCCTGAAGACACATATGTTTGCCTTTTTCTCCCGGCATGACGCATCACAT GTCGGATCGCCCACGACACCAAGTGCTTGCAACGTATACTGTTCGTGCTC GACGCGCATCCGTTTCAGGGAGCCTGGCAGTTCCAGCTACAAAGAAAGCA CTCGCTCATCCACCTGGCGTTCGTATCCTACGCTGCGGACCGAATCCTTC GCCGAGAGAGGATAGAAAGTGAACAAATCTACGATCGTCTCGGGGCTCGC ATGATCCCAGGGACGCAGCACCGAGAGCTCGAGGACGTCACTGAGGGTTG CACGGCCTACTGCGAGATCACGGGTGCGCCCAAGATAGCTTTTCCACTCT TTTGTACTACTGCGGATTCTTGCGGGGAGCTCCGAGTCGAGGAGGACGAT GAAAGGGGTGGCAACGATGTTGTGCGTTGTTTGAGAGCTCTGCGGGAACT TAATGGGTTTGTTTGCGGGCTGGCCAGGGGCGATGTCCTCGAAACGCAGA GGTCGAGTAACGGTGGGACCGTTGCGATTCCCTACGAACTGCAACCAGTT TTATCGAGTGTACCGCGCTAGCGACCGAGGCTGAGGGGATTTGTCTTTCA TACTCACGGTATTTCTGTAGTTATGCGCTTACATGTTTTGCGGTCACGGG ATGCATGGTTTGCGGACATTCGCCCGCTTGGGGTGACATGTGCTTACGGC GAGGTTTGTTGGTTGCCGAGATAAAACAGCGATAAGTGGTATGACGAGTA GAGAGCAAAGACTTTTTTTGCGGAGATTCGTCAAGATTGGAATGAGCCGA ATGATGAAACCCAGGTTTCG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig9:672226..677645+

>mRNA_A-nodosum_M_contig9.32.1 ID=mRNA_A-nodosum_M_contig9.32.1|Name=mRNA_A-nodosum_M_contig9.32.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=513bp|location=Sequence derived from alignment at A-nodosum_M_contig9:672226..677645+ (Ascophyllum nodosum dioecious)
ATGCTGGCGAAGTTTCTCGGACGCGAGATCCGCTTCGCCTTCAAGTGTGC
CACCGATGAGGGAGCCTGGCAGTTCCAGCTACAAAGAAAGCACTCGCTCA
TCCACCTGGCGTTCGTATCCTACGCTGCGGACCGAATCCTTCGCCGAGAG
AGGATAGAAAGTGAACAAATCTACGATCGTCTCGGGGCTCGCATGATCCC
AGGGACGCAGCACCGAGAGCTCGAGGACGTCACTGAGGGTTGCACGGCCT
ACTGCGAGATCACGGGTGCGCCCAAGATAGCTTTTCCACTCTTTTGTACT
ACTGCGGATTCTTGCGGGGAGCTCCGAGTCGAGGAGGACGATGAAAGGGG
TGGCAACGATGTTGTGCGTTGTTTGAGAGCTCTGCGGGAACTTAATGGGT
TTGTTTGCGGGCTGGCCAGGGGCGATGTCCTCGAAACGCAGAGGTCGAGT
AACGGTGGGACCGTTGCGATTCCCTACGAACTGCAACCAGTTTTATCGAG
TGTACCGCGCTAG
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