|
|
Homology
BLAST of mRNA_A-nodosum_M_contig8769.1.1 vs. uniprot
Match: A0A6H5J9Z0_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z0_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.330e-13 Identity = 53/142 (37.32%), Postives = 76/142 (53.52%), Query Frame = 3
Query: 387 QPSTAQAGFRAIRGEASPR--RTGLSNCSVCDTKFTIFEHRHMCQKCQEPVCNRCSRSRKVFRAGTKPKRVCDDCVKTF-----PSATKMLSDMSNTI---ESENRSRLTLPASDAA---DTCAERTIVSPNPASA-FFGIG 770
+P GFR I + +P +T L+ C+VC +FT HRH C+ C + VCN C++SRKV RA T PKRVCD C++ P+ TK + + + + + R LT+ SD + D A + PA+A FFG G
Sbjct: 30 KPCATPRGFREIPLQITPSTWKTDLTKCNVCGDRFTWLNHRHKCRNCWQAVCNSCAKSRKVIRARTAPKRVCDTCIQNCWTPRTPAVTKPAAAAGSVVTKADGDRRVSLTVSTSDGSCPVDATATAPLSPGTPAAAGFFGPG 171
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 65071.PYU1_T008781 |
| Preferred name | SGK2 |
| PFAMs | PX,Pkinase,Pkinase_C |
| Model size | 2243 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K13302,ko:K13303,ko:K13304,ko:K19681 |
| KEGG Pathway | ko04068,ko04150,ko04151,ko04960,map04068,map04150,map04151,map04960 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000226,GO:0000902,GO:0001558,GO:0002028,GO:0002119,GO:0002164,GO:0003008,GO:0003013,GO:0003014,GO:0003096,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004712,GO:0005246,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005768,GO:0005769,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006873,GO:0006875,GO:0006883,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007019,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007492,GO:0007498,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0007632,GO:0008015,GO:0008092,GO:0008150,GO:0008152,GO:0008217,GO:0008289,GO:0008306,GO:0008542,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009791,GO:0009888,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010639,GO:0010646,GO:0010648,GO:0010720,GO:0010765,GO:0010769,GO:0010770,GO:0010941,GO:0010959,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0015459,GO:0015672,GO:0016020,GO:0016043,GO:0016247,GO:0016301,GO:0016310,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0017080,GO:0017081,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022008,GO:0022411,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023057,GO:0030001,GO:0030003,GO:0030004,GO:0030030,GO:0030154,GO:0030182,GO:0030307,GO:0030334,GO:0031109,GO:0031110,GO:0031111,GO:0031113,GO:0031115,GO:0031175,GO:0031323,GO:0031326,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031960,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032271,GO:0032272,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032886,GO:0032984,GO:0032989,GO:0032990,GO:0033043,GO:0033554,GO:0033993,GO:0034220,GO:0035091,GO:0035556,GO:0036211,GO:0040008,GO:0040012,GO:0042127,GO:0042175,GO:0042221,GO:0042592,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043269,GO:0043270,GO:0043401,GO:0043402,GO:0043412,GO:0043423,GO:0043434,GO:0043624,GO:0043933,GO:0044057,GO:0044058,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045927,GO:0048037,GO:0048156,GO:0048382,GO:0048468,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048585,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050877,GO:0050890,GO:0050896,GO:0051046,GO:0051049,GO:0051050,GO:0051090,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051261,GO:0051270,GO:0051384,GO:0051493,GO:0051494,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0055037,GO:0055065,GO:0055067,GO:0055078,GO:0055080,GO:0055082,GO:0055085,GO:0060255,GO:0060284,GO:0060341,GO:0060453,GO:0060548,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070293,GO:0070294,GO:0070507,GO:0070887,GO:0071310,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0097435,GO:0097458,GO:0097708,GO:0098771,GO:0098772,GO:0098827,GO:0099106,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:0140096,GO:1900006,GO:1901099,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901981,GO:1902903,GO:1902904,GO:1903506,GO:1903827,GO:1904375,GO:1904508,GO:1905475,GO:2000026,GO:2000112,GO:2000145,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001239,GO:2001240 |
| Exons | 3 |
| Evalue | 2.03e-06 |
| EggNOG OGs | KOG0598@1|root,KOG0598@2759|Eukaryota |
| EC | 2.7.11.1 |
| Description | protein serine/threonine kinase activity |
| Cds size | 1650 |
| COG category | H |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko03036 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870278.193939-UTR-A-nodosum_M_contig8769:777..1070 | 1680870278.193939-UTR-A-nodosum_M_contig8769:777..1070 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig8769 778..1070 + |
| 1680870278.241704-UTR-A-nodosum_M_contig8769:4045..4345 | 1680870278.241704-UTR-A-nodosum_M_contig8769:4045..4345 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig8769 4046..4345 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870278.2082736-CDS-A-nodosum_M_contig8769:1070..1251 | 1680870278.2082736-CDS-A-nodosum_M_contig8769:1070..1251 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig8769 1071..1251 + |
| 1680870278.2215838-CDS-A-nodosum_M_contig8769:2149..2235 | 1680870278.2215838-CDS-A-nodosum_M_contig8769:2149..2235 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig8769 2150..2235 + |
| 1680870278.2313876-CDS-A-nodosum_M_contig8769:2662..4045 | 1680870278.2313876-CDS-A-nodosum_M_contig8769:2662..4045 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig8769 2663..4045 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8769.1.1 >prot_A-nodosum_M_contig8769.1.1 ID=prot_A-nodosum_M_contig8769.1.1|Name=mRNA_A-nodosum_M_contig8769.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=550bp
MTADSAASMNDHNEPASPPRTTSERTARPGRQPSTAQAGFRAIRGEASPR RTGLSNCSVCDTKFTIFEHRHMCQKCQEPVCNRCSRSRKVFRAGTKPKRV CDDCVKTFPSATKMLSDMSNTIESENRSRLTLPASDAADTCAERTIVSPN PASAFFGIGMVGMPSSRTLPPPTPAGGDDSAPKPLATAFARLQVGVKAFF GGRRASGDNVENKKPDAQIAAATVKTHPSSSSLPPAQQHDRLQGDMELVT NGGQGQAGSDDKGPDFDSAMSTAPVVPAVATTEMQEDAEASYAQDTNEAD TFDRAVLGLDVSHFSSAAADTPTNYYTPATAAPAHYKEDVQKPVHNEMEA GDAVALCPHKTNEGGTIDGALVELKITAAEPTTGANSTPFLPASSPSIAT PASPSTTAILSQDQEVVRNEVAVEATDGAQAVETSKNDIVNGAELKAAET DAPVTTTVDVLAGAAPSTGIPAFAAPELSPEEVHETVHEEVAKKDSEASD TSGTASSASTWGKKSIARSVWMHFNTGIYGWLAAVSVGLAVGLLLLERN* back to topmRNA from alignment at A-nodosum_M_contig8769:778..4345+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig8769.1.1 ID=mRNA_A-nodosum_M_contig8769.1.1|Name=mRNA_A-nodosum_M_contig8769.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3568bp|location=Sequence derived from alignment at A-nodosum_M_contig8769:778..4345+ (Ascophyllum nodosum dioecious) CTTAGAAAAACCGTTCAACCGCTCGGTAGCCGGTTATATCTCGGTTTGAT
TCATCGATTAGGTGTTGACCTATAAACGTTTACGGAGGTTACGTAAATAA
ACCGTTCGTACATTCGCGCGGGAAAACGTGATCTCTCCCTCTACGTTCGT
TCACCATCTTTCAGTCTAGTCCTCGCCACACGCTTGTGGAGGTGTCTAAC
GAAGTCCTATTAGCTCGCTAAGTGGAACGATAGCCTACGTTTCCGCCCAG
TAAACTGTGACTAGTGGCTCTCGTCAGAAGTAATCGTATCATCATGACGG
CCGATTCTGCAGCGTCTATGAATGATCACAACGAACCCGCTTCGCCTCCT
CGAACCACTTCTGAAAGGACTGCCAGGCCTGGGCGCCAGCCTAGTACGGC
ACAAGCAGGATTCAGGGCTATCCGAGGGGAGGCCTCTCCCCGGCGGACCG
GCCTGTCGAACTGCAGCGTATGTGGTGAGCGCCGTGAGAACATGTTGAAG
CTTCTGTAATATAGCGGTTATTTAATCCTTGTGGCTACTCTATCGGTACT
ACATCTGTACAGCAGTACTCTCTGTAAAAGAGTACTTCTAGCGTTTCATC
ATCATCGTGGATACAGTGTGTGTGTGTTTTCTTTTGGGCATCAAGTTCGT
TGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACGCAGGATTTTTC
ATCCATCTTCTTTACATACCCGGTACTGTGTTTTCGGTGTCACAGTACAG
TCACAATACAGGAGTGGCACCCATGTATGCATACATACCCTCACACAGGA
GAAAAGGGCATGGGTGTGCTCTCTTACGTTTCGTGCCGGTGGCGGCTGTG
GTCACATGAATAATAAACGGAAGCAAGTATTCTAATCGTTGTTGATTCCG
CTTCACAACACTTCACCAGAGATGCGTGACGCGGGCGAATGCTGACATTC
GTCCAATTGGGTAATGTCGAGTGTTCCCATATAGGGTCCAGACGTGACGC
GTACAAGTACAGTAATTCACTATATTAGAAATACAGTAGTAGAAGAGTTT
TACGTTTGTAAACTGGTACAGCAGTACACTTGAGCCTCAATTCGCACGAC
GACTGCAGAGACAACCGATCACTTCGCGTCGTACCTGTACGCAAGAGACT
TCTCCACCTTCCTGAAAAGCGGTGTCTTTCGGACCCAAGAACGACTGTCT
CGATGTGTAGTCTCTAGAGGTTCATTAAGAGTTCATATCACATGCAACAA
CAAAAAAATAGACGGAGAATTTGTTGAGTATCATGCTCTGCCTGAATCTT
CGAAACAGCATGCTGAACGCTCGTTTTACCCCGTCATTTGATCCTGATGC
CTCTTATTTCTTATTTATGCAGATACAAAATTCACCATCTTCGAACACAG
ACACATGTGTCAGAAATGCCAGGAGCCAGTGTGTAATCGATGCTCCCGTA
GCCGCAAGGTGAACTACTGAAACTCGAGAGCTGTAAAAGCTACACAGCAA
TGAGTACAAGTAGCTCTCGACACAACAGATTGCTGACGAGTCACTGGTGT
TTGTTACGTTTCTACGAGTTGCGTTTCGTTTTTCAGTATCGTGCCTCGTA
CAGCGCCATGGCAACGTTTGCCAGCTTAAAAGTGTTACGCTCTCGGTTGA
TCGTACTTGTAATCGTAGTAGGTGTCGTGTAAAACTTCCCCCTTCCGTCA
TTAGAACGAGGTCATTCAACGTATGTCTCAAACCTTGCTACTAGTATACA
TAGAGCACACCACTGCGCAGCCGGATACGGATAAAGCGCTGCCCGCGCTT
GAAATGTCTCAAAATGTAGTCACTCATCCGCCATCTCCCTGCAATCTAAT
ATCCTGCTCTCCGATGATTCTGCCATACATTGCAGGTTTTTCGAGCCGGC
ACGAAACCCAAGCGTGTTTGCGACGATTGCGTTAAAACGTTCCCATCAGC
GACGAAGATGCTCTCGGACATGAGCAACACGATCGAATCTGAGAATCGTT
CGCGGCTGACTCTACCCGCCTCGGACGCGGCTGATACCTGCGCCGAGCGA
ACGATAGTTTCTCCCAACCCCGCATCCGCATTTTTTGGAATCGGCATGGT
TGGAATGCCGTCGTCGCGGACGCTTCCGCCGCCGACACCAGCTGGTGGAG
ACGACTCGGCACCGAAACCGCTAGCAACGGCTTTCGCACGATTGCAAGTC
GGGGTTAAAGCATTTTTTGGAGGCCGCCGTGCAAGCGGCGACAATGTCGA
GAATAAAAAGCCTGACGCACAAATCGCCGCCGCCACAGTGAAAACGCATC
CGTCGTCGTCCTCGCTGCCGCCTGCGCAGCAGCATGACCGACTGCAAGGT
GACATGGAGCTAGTTACCAATGGCGGCCAAGGGCAGGCAGGCAGCGATGA
TAAGGGGCCTGACTTCGACTCAGCGATGTCTACCGCCCCAGTCGTCCCGG
CCGTAGCTACGACTGAAATGCAAGAAGACGCAGAAGCGTCTTACGCACAG
GATACTAATGAAGCCGACACATTCGACAGGGCTGTGCTGGGGCTGGACGT
CTCCCACTTTTCGTCTGCCGCTGCTGATACCCCGACCAATTACTACACCC
CTGCCACTGCCGCCCCGGCCCACTACAAGGAAGACGTGCAGAAACCAGTG
CACAACGAGATGGAAGCAGGAGATGCGGTTGCACTCTGCCCTCATAAGAC
CAATGAGGGAGGTACCATCGACGGTGCTCTGGTGGAGTTGAAAATCACTG
CCGCTGAGCCTACTACCGGCGCCAACTCTACTCCCTTCCTCCCCGCCTCC
AGTCCTTCAATCGCCACTCCTGCCTCCCCCTCCACTACCGCCATCCTGTC
ACAAGATCAAGAGGTAGTGCGCAATGAGGTCGCAGTAGAAGCCACAGACG
GGGCTCAAGCTGTAGAGACCAGTAAGAACGACATCGTGAACGGCGCTGAG
TTGAAGGCCGCTGAAACTGATGCACCCGTCACCACTACCGTTGATGTTCT
CGCCGGTGCAGCACCCTCCACTGGCATCCCTGCCTTCGCAGCTCCGGAAC
TTTCGCCGGAAGAAGTGCACGAGACAGTGCACGAGGAGGTTGCCAAAAAA
GACTCAGAGGCATCTGACACATCCGGGACCGCCAGTTCGGCTTCTACATG
GGGTAAAAAGAGTATTGCCCGTTCGGTATGGATGCATTTTAATACCGGAA
TCTATGGCTGGCTGGCGGCGGTTTCCGTAGGGCTGGCAGTGGGCTTGCTC
TTATTAGAACGCAATTGATGGTTTCTGAATCCTACCGCGTCATGTAGTCG
ACCGGGACTAACGCCACCAAAACTTGCGGACTTGCGCGTGAGCAAATGCA
GCTTGCGGAACAAGGTCGTTTCAAGAGGTCAGGAAGTACACCACTGTCCT
TTTCGCTGTAAGACCGTCGCGTGTCCACGTTTTCTTCGTAAATGTGTGGA
GTTGATTTGGAACGGTAGATTGTAGGGGCAAAATTGTATTTTATGTATTG
TACGAGTTTATTTTGTCTGTGGGCGGGATTATTGTGCTGAAGAGTCTACC
TCCACAGGATCAAGAAGA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig8769:778..4345+ >mRNA_A-nodosum_M_contig8769.1.1 ID=mRNA_A-nodosum_M_contig8769.1.1|Name=mRNA_A-nodosum_M_contig8769.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1650bp|location=Sequence derived from alignment at A-nodosum_M_contig8769:778..4345+ (Ascophyllum nodosum dioecious) ATGACGGCCGATTCTGCAGCGTCTATGAATGATCACAACGAACCCGCTTC GCCTCCTCGAACCACTTCTGAAAGGACTGCCAGGCCTGGGCGCCAGCCTA GTACGGCACAAGCAGGATTCAGGGCTATCCGAGGGGAGGCCTCTCCCCGG CGGACCGGCCTGTCGAACTGCAGCGTATGTGATACAAAATTCACCATCTT CGAACACAGACACATGTGTCAGAAATGCCAGGAGCCAGTGTGTAATCGAT GCTCCCGTAGCCGCAAGGTTTTTCGAGCCGGCACGAAACCCAAGCGTGTT TGCGACGATTGCGTTAAAACGTTCCCATCAGCGACGAAGATGCTCTCGGA CATGAGCAACACGATCGAATCTGAGAATCGTTCGCGGCTGACTCTACCCG CCTCGGACGCGGCTGATACCTGCGCCGAGCGAACGATAGTTTCTCCCAAC CCCGCATCCGCATTTTTTGGAATCGGCATGGTTGGAATGCCGTCGTCGCG GACGCTTCCGCCGCCGACACCAGCTGGTGGAGACGACTCGGCACCGAAAC CGCTAGCAACGGCTTTCGCACGATTGCAAGTCGGGGTTAAAGCATTTTTT GGAGGCCGCCGTGCAAGCGGCGACAATGTCGAGAATAAAAAGCCTGACGC ACAAATCGCCGCCGCCACAGTGAAAACGCATCCGTCGTCGTCCTCGCTGC CGCCTGCGCAGCAGCATGACCGACTGCAAGGTGACATGGAGCTAGTTACC AATGGCGGCCAAGGGCAGGCAGGCAGCGATGATAAGGGGCCTGACTTCGA CTCAGCGATGTCTACCGCCCCAGTCGTCCCGGCCGTAGCTACGACTGAAA TGCAAGAAGACGCAGAAGCGTCTTACGCACAGGATACTAATGAAGCCGAC ACATTCGACAGGGCTGTGCTGGGGCTGGACGTCTCCCACTTTTCGTCTGC CGCTGCTGATACCCCGACCAATTACTACACCCCTGCCACTGCCGCCCCGG CCCACTACAAGGAAGACGTGCAGAAACCAGTGCACAACGAGATGGAAGCA GGAGATGCGGTTGCACTCTGCCCTCATAAGACCAATGAGGGAGGTACCAT CGACGGTGCTCTGGTGGAGTTGAAAATCACTGCCGCTGAGCCTACTACCG GCGCCAACTCTACTCCCTTCCTCCCCGCCTCCAGTCCTTCAATCGCCACT CCTGCCTCCCCCTCCACTACCGCCATCCTGTCACAAGATCAAGAGGTAGT GCGCAATGAGGTCGCAGTAGAAGCCACAGACGGGGCTCAAGCTGTAGAGA CCAGTAAGAACGACATCGTGAACGGCGCTGAGTTGAAGGCCGCTGAAACT GATGCACCCGTCACCACTACCGTTGATGTTCTCGCCGGTGCAGCACCCTC CACTGGCATCCCTGCCTTCGCAGCTCCGGAACTTTCGCCGGAAGAAGTGC ACGAGACAGTGCACGAGGAGGTTGCCAAAAAAGACTCAGAGGCATCTGAC ACATCCGGGACCGCCAGTTCGGCTTCTACATGGGGTAAAAAGAGTATTGC CCGTTCGGTATGGATGCATTTTAATACCGGAATCTATGGCTGGCTGGCGG CGGTTTCCGTAGGGCTGGCAGTGGGCTTGCTCTTATTAGAACGCAATTGA back to top
|