mRNA_A-nodosum_M_contig87.8.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig87.8.1
Unique NamemRNA_A-nodosum_M_contig87.8.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE)

HSP 1 Score: 513 bits (1322), Expect = 6.160e-173
Identity = 259/379 (68.34%), Postives = 283/379 (74.67%), Query Frame = 2
Query:  617 APQQAELPDDDFATFPPLSPATLESVMGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMLEFGGGRKLLDAEYCDPNSDENKAGGMGGTDEE-------------------EHRRPRPLLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVAR------------PHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEFDATWR 1660
            A +  +LPDDDFATFPPLSP TL+S+MGVDVFDLP GG+ A E GQ+ ALP QVLECIR RHG+ EF GGR+LLD EY   + +   A   G                        +    +  LLFPGLRLLHAEPPVIGV DFFT EECD Y+SRS+SP                          PHMQRSATLGADVD+VAQRTSTTWFHR+SAVPELMAKASALVG+PF+EGRWEEAQTVRYRPGEKFTWHLDALPP PDLASKGGQRIATLLVYLTEMPE DGGATAFRDLGPLRVRPRKGSAL+FFPS GGAP+CPFDIRTLHAGE+VR G +QDKWIAQLWLRE  YTPTVPK NRH  A+S VAEFD  W+
Sbjct:  197 AARGGQLPDDDFATFPPLSPDTLKSIMGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEFDKIWQ 575          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 8.600e-164
Identity = 241/349 (69.05%), Postives = 264/349 (75.64%), Query Frame = 2
Query:  695 MGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMLEFGGGRKLLDAEYCDPNSDENKAGGMGGTDEE-------------------EHRRPRPLLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDV--------ARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEFDATWR 1660
            MGVDVFDLP GG+ A E GQ+ ALP QVLECIR RHG+ EF GGR+LLD EY   + +   A  MG                        +    +  LLFPGLRLLHAEPPVIGV DFFT EECD Y+SRS+SP                    + PHMQRSATLGADVD+VAQRTSTTWFHR+SAVPELMAKASALVG+PF+EGRWEEAQTVRYRPGEKFTWHLDALPP PDLAS+GGQRIATLLVYLTEMPE DGGATAFRDLGPLRVRPRKGSAL+FFPS GGAP+CPFDIRTLHAGE+VR G +QDKWIAQLWLRE  YTPTVPK NRH  A++VVAEFD  W+
Sbjct:    1 MGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLQEFAGGRRLLDPEYYGADGEAGDAALMGSXXXXXXXXXXXXXXXXXXXXXXGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEFDKIWQ 349          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.060e-85
Identity = 147/248 (59.27%), Postives = 177/248 (71.37%), Query Frame = 2
Query:  929 LLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADG----GSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
            L  F   R+LH +P V+ VDDFFT EECDA ++RS +      AD     G+ +    + +S T+G D  + AQRTSTTWFH Y+ VPELMAKA  L+GI  D   +EE QTVRYR  E FTWHLDAL PTP+LA KGGQR ATLLVYLT++ E+DGGAT FRDLG     PL+VRP+KGSAL+FFP+ GG P+ P D+RTLH GE V S  +QDKWIAQLWLRE PYTPT P GN HA ASS ++++
Sbjct:  232 LKPFSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVIT--ADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGIN-DISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVASDAEQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 3.810e-84
Identity = 158/359 (44.01%), Postives = 204/359 (56.82%), Query Frame = 2
Query:  572 ETTAASPGTASRQNFAPQQAELPDDDFATFPPLSPATLESVMGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMLEFGGGRKLLDAEYCDPNSDENKAGGMGGTDEEEHRRPRPLLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGK-QDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
            +T A +P  A  +    +  ELP+D F+ FPPL+P   +++                  G+ TA P +V + IR+RHG   F                           DE+         LFPG+RLLHA+P V  V+ FFT +ECDAY++ S          G +    P   +SAT  +        TSTTWFH Y++ PEL+AKAS L+G+  D  +WEE QTVRYRPGE+F WHLDALPP+   ASKGGQR AT+LVYLT M    GGATAFRDLGPLRVRP+KG  L+FFPS GG    PFD R LHAGE+V  G K ++K+IAQLW  + PY P+VP+G+ H  A   + ++
Sbjct:   45 KTPAKAPYPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPA-------------GKATAFPVEVADRIRERHGFEHF---------------------------DEK---------LFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLA----PTELQSATTSSQCQQXX--TSTTWFHHYASAPELVAKASLLLGVD-DYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 347          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA)

HSP 1 Score: 273 bits (699), Expect = 5.480e-84
Identity = 134/241 (55.60%), Postives = 171/241 (70.95%), Query Frame = 2
Query:  938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
            F   R+LH +P V+ VDDF T++ECD  V+ + +P      D  ++ A   + +S T+G D+ S +QRTSTTWFH Y  +P+LMAKAS L+G+  +  RWEE QTVRYR  EKFTWHLDAL P+ +LA  GGQR+ATL+VYL ++PE  GG+T FRDLG     PL+V P+KGSAL+FFP+ GG PN PFDIRTLHAGE V    + DKWIAQLWLRE  YTPT P GN HA A+  ++++
Sbjct:   26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPK----YDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLD-NIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.220e-82
Identity = 134/241 (55.60%), Postives = 171/241 (70.95%), Query Frame = 2
Query:  938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
            F   R+LH +P V+ VDDF T++ECD  V+ + +P      D  ++ A   + +S T+G D+ S +QRTSTTWFH Y  +P+LMAKAS L+G+  +  RWEE QTVRYR  EKFTWHLDAL P+ +LA  GGQR+ATL+VYL ++PE  GG+T FRDLG     PL+V P+KGSAL+FFP+ GG PN PFDIRTLHAGE V    + DKWIAQLWLRE  YTPT P GN HA A+  ++++
Sbjct:  123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPK----YDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLD-NIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA)

HSP 1 Score: 274 bits (701), Expect = 6.160e-82
Identity = 142/241 (58.92%), Postives = 171/241 (70.95%), Query Frame = 2
Query:  938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGP-----LRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
            F   R+LH +P VI VDDFFT EECD Y++  +S   A   DG +      M RS T+G D  + +QRTSTTWFH Y  VPELMAK+S L G+  D G +EE QTVRY+P +KFTWHLDAL P  +  SKGGQR ATLLVYLT++  EDGGAT FRDLGP     L+V+P+KGSAL+FFP+ GG PN PFDIRTLHAGE+V +  K DKWIAQLWLRE  Y PTVP  N HA A+  ++++
Sbjct:  202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIA--MSDPTAGNKDGDAV-----MTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLD-DIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKSDKWIAQLWLREDSYEPTVPPENVHAAATEPISQY 434          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA)

HSP 1 Score: 267 bits (682), Expect = 4.380e-81
Identity = 133/240 (55.42%), Postives = 164/240 (68.33%), Query Frame = 2
Query:  938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAE 1642
            F   R+LH +P ++ +DDF T  ECD Y+S + +P      D  ++ A   + +S T+G D+ S +QRTSTTWFH Y  +  LMAKAS L+G+   E RWEE QTVRYR  EKFTWHLDAL P+ +L   GGQR+ATLLVYL ++P+  GG+T FRDLG     PL+V+P+KGSAL+FFP+ GG PN PFDIRTLHAGE V      DKWIAQLWLRE  YTPT P GN H  A   V+E
Sbjct:   57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPK----YDKNANTAPMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIE-RWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESDDDKWIAQLWLREHVYTPTAPPGNSHEAAVEAVSE 291          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC)

HSP 1 Score: 269 bits (687), Expect = 1.880e-79
Identity = 139/247 (56.28%), Postives = 170/247 (68.83%), Query Frame = 2
Query:  938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQ-----RSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLA---SKGGQRIATLLVYLTEMPEEDGGATAFRDLG---PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
            F   R+LH +P VI VDDFFT+EECD YV  S+       A+   D     +Q     +S T+G D  S AQRTSTTWFH Y+ VPELMA+A+ L+G+P    R+EE QTVRYR  EKFTWHLDAL  +PD+A   S  GQR++TLLVYLT++  E+GGAT FRDLG   PL+VRP+KGSAL+FFPS GG P+CPFDIRTLH GE V      +KWIAQLWLR+  YTPT P G+ H  A+  + E+
Sbjct:  229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSID------AENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLP-GISRFEEPQTVRYRRSEKFTWHLDAL--SPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGEDAPNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEY 466          
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A448ZM68_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZM68_9STRA)

HSP 1 Score: 265 bits (678), Expect = 3.080e-78
Identity = 138/249 (55.42%), Postives = 165/249 (66.27%), Query Frame = 2
Query:  938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQ-RSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGP------------LRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
            F  + +LH +P V+ +DDFFT EECD YV  SL    AP+ D GS       + RS T+G D ++ +QRTSTTWFH Y  VPELM+KAS LVG+   + RWEE QTVRY+  EKFTWHLDAL P    A KGGQR+ATLLVYL ++  E GGAT FRDL P            L+V+P+KGSALMFFP+ GG P  PFDIRTLH GE+V    + DKWI+QLWLR   YTPT P GN H +A   V E+
Sbjct:  221 FEKINVLHLDPLVLSIDDFFTEEECDRYVEMSL----APVTDEGSQKTMDSFKTRSKTVGKDKNAKSQRTSTTWFHHYKNVPELMSKASRLVGLDTID-RWEEPQTVRYKRNEKFTWHLDALAPDQSTAEKGGQRLATLLVYLKDL--ESGGATIFRDLTPATGETDDNASGFLKVQPKKGSALMFFPAAGGIPGAPFDIRTLHCGEVVPGASETDKWISQLWLRATXYTPTAPPGNLHEEALDRVKEY 462          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0Y5_9PHAE6.160e-17368.34Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
D7G1H9_ECTSI8.600e-16469.05Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2UAB3_9STRA1.060e-8559.27Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6H5KGF5_9PHAE3.810e-8444.01Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A7S1ZRX7_9STRA5.480e-8455.60Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4QXQ4_9STRA1.220e-8255.60Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2KCF3_9STRA6.160e-8258.92Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2N1B0_9STRA4.380e-8155.42Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
K0SVE6_THAOC1.880e-7956.28Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A448ZM68_9STRA3.080e-7855.42Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig87contigA-nodosum_M_contig87:143248..149333 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G1H9
PFAMs2OG-FeII_Oxy_3
Model size1923
Max annot lvl2759|Eukaryota
KEGG rclassRC00478
KEGG koko:K00472
KEGG ReactionR01252
KEGG Pathwayko00330,ko01100,map00330,map01100
Hectar predicted targeting categoryother localisation
Exons5
Evalue9.23e-168
EggNOG OGsKOG1591@1|root,KOG1591@2759|Eukaryota
Ec32 ortholog descriptionOxoglutarate/iron-dependent dioxygenase
Ec32 orthologEc-07_001070.1
EC1.14.11.2
Descriptionprocollagen-proline 4-dioxygenase activity
Cds size1350
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig87.8.1prot_A-nodosum_M_contig87.8.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig87 143582..149094 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870262.3108447-UTR-A-nodosum_M_contig87:143247..1435811680870262.3108447-UTR-A-nodosum_M_contig87:143247..143581Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig87 143248..143581 +
1680870262.5146668-UTR-A-nodosum_M_contig87:149094..1493331680870262.5146668-UTR-A-nodosum_M_contig87:149094..149333Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig87 149095..149333 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870262.3255262-CDS-A-nodosum_M_contig87:143581..1443851680870262.3255262-CDS-A-nodosum_M_contig87:143581..144385Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig87 143582..144385 +
1680870262.3365922-CDS-A-nodosum_M_contig87:145049..1451631680870262.3365922-CDS-A-nodosum_M_contig87:145049..145163Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig87 145050..145163 +
1680870262.3526216-CDS-A-nodosum_M_contig87:147910..1480961680870262.3526216-CDS-A-nodosum_M_contig87:147910..148096Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig87 147911..148096 +
1680870262.3648088-CDS-A-nodosum_M_contig87:148287..1483681680870262.3648088-CDS-A-nodosum_M_contig87:148287..148368Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig87 148288..148368 +
1680870262.374491-CDS-A-nodosum_M_contig87:148929..1490941680870262.374491-CDS-A-nodosum_M_contig87:148929..149094Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig87 148930..149094 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig87.8.1

>prot_A-nodosum_M_contig87.8.1 ID=prot_A-nodosum_M_contig87.8.1|Name=mRNA_A-nodosum_M_contig87.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=450bp
MFSINMAAKGNNGNTTKNAKKGPRRSAGDRNTKGSVGGGGGGGGGGGVGF
GASSGLATSTATPTATDPTLTSEVKTTPRETTAASPGTASRQNFAPQQAE
LPDDDFATFPPLSPATLESVMGVDVFDLPEGGVTAREEGQETALPRQVLE
CIRDRHGMLEFGGGRKLLDAEYCDPNSDENKAGGMGGTDEEEHRRPRPLL
LFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVAR
PHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGR
WEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEED
GGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSG
GKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEFDATWRQAAAAAA*
back to top

mRNA from alignment at A-nodosum_M_contig87:143248..149333+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig87.8.1 ID=mRNA_A-nodosum_M_contig87.8.1|Name=mRNA_A-nodosum_M_contig87.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6086bp|location=Sequence derived from alignment at A-nodosum_M_contig87:143248..149333+ (Ascophyllum nodosum dioecious)
ACGAGTGACTTCATGTTTAGCATACGCTGCAATAATTTCGTCGTGTTGGG CGGGAGACGTTGTCACTACATGCCGTGCTCTCCAACCTTCAAGCGGATAT GATCATGATTATAGATCTCGCCAACAACAAATACAGCAGAAGCGGGAGCG GAGTCACAATACTCTAACCAACTTCGCCCTCGCGAGGCCACAACCGATTC ACGATGCAACACCAGCAGTCACCAGGCGGAATTATTACTCTTCCCCAGCA ACGAGGGAAAGCGTGCCCGATGCGCGCATCGCCAACTGCTGGGGCTGTGG TGGTACGCATCGCACCATCAACAGAAAGAGGTTCATGTTCTCCATCAACA TGGCTGCCAAGGGCAACAACGGGAACACGACGAAAAACGCCAAAAAAGGC CCTCGTCGATCCGCCGGAGACAGGAATACGAAAGGAAGTGTCGGAGGTGG TGGCGGTGGTGGTGGAGGTGGCGGCGTTGGGTTTGGTGCTTCTTCTGGTC TCGCGACCTCAACCGCCACTCCGACCGCTACCGATCCGACCCTTACTTCC GAGGTGAAAACCACGCCGAGGGAAACAACGGCAGCTTCTCCAGGGACGGC GAGTCGGCAAAATTTCGCTCCGCAGCAGGCAGAATTGCCAGACGACGACT TCGCCACGTTCCCGCCGCTGTCTCCCGCCACTCTCGAGTCTGTCATGGGG GTGGACGTGTTCGACCTCCCGGAAGGCGGCGTCACCGCTCGCGAGGAGGG GCAGGAAACTGCGCTTCCCCGTCAGGTGCTGGAGTGCATTCGGGATCGCC ACGGTATGTTAGAGTTTGGCGGTGGGCGGAAGCTTTTGGACGCGGAATAC TGCGACCCCAATAGCGACGAAAATAAGGCAGGGGGCATGGGCGGAACGGA TGAAGAAGAGCATCGCCGGCCACGACCTCTGCTGCTGTTCCCCGGGTTGA GGCTACTGCACGCCGAGCCGCCCGTGATCGGAGTCGACGATTTCTTCACC GCCGAGGAGTGTGACGCCTACGTTTCAAGGTCGCTCTCGCCCGCGCCCGC GCCGCTCGCTGACGGTGGTTCTGATGTAGCGCGACCGCACATGCAGCGGA GCGCGACGCTAGGGGCGGATGTGGATTCGGTGGCCCAGGTTAGTGACCAC GAACAGTACGTAAGCTTACCCAACAGCGGTAAGAGGTTCGTCTACGTTCC TTCTGAACGTGGAAGTGCCGTGAGGCTTGTCGGATCGCGTCCTCGCACTG TTGTTGTACCACATGCGTGGCGATACGGCCGGGGACACACGCCTACTGTA ACTATTGGTTTCCTTTCCGTTTAGGGTTAACGGTGAGTCATTGTCAAAAC GTGATGCTAATAAAGCTCTACATAGATTGCAGAGCCTCGCTTCATGATCA TTCCAAGCGCGTGTGGATGCTGAACACGGCGGGTCACTCATCGCCATGTT TTCCGGGGGATGGACAAGATGTTTCCCAGGCTTGATATATGTTTTTCAAG TTTCGCGATCATTCGGTGATGATGCCGCGCGATGTCCCTCGCGTCTTTTC TATCTTCTGGTGCAACCTCGACTCCCTCAAATCTTATTTTCGTATCGCAT CTGTATGAGGCTACCTTTGGAAGAATGAGAGAGAAAGAGAGAGAGAGAGA TGGTGAGAGAGGTTTCGCAAACACGTGCTTTAAAAAATACCCCGCGCATA AGTATGTGTATCAATAGACAGCATCGTGTACCCGTGCCAATACCGTTGTA CTGAAGGCGTACGTGTTCACTTCCGGTACAATTTTCCTTCACCTGTCTGC AGCGAACGTCGACGACCTGGTTCCACCGCTATTCGGCCGTGCCTGAGCTC ATGGCCAAGGCCTCTGCTCTAGTCGGCATCCCCTTCGACGAGGGGCGGTG GGAGGAGGCGCAGACGGTGAGAGAGGTCGTGCCTGCAGGGGTTTTGCTTC CGGCGCCGTTACATTTGAAATATGGTTTGCTTACTATAGAGAATGTGCAT CACACCTGCACGAACAGTGTCGCTCACACATATGTCTTGGGTCACGAGAA AAAACGTGGTATTGATAGTAAAGAGAGGGAGGAAGTAAAGGAAATGCGAG TAAAGGGGTAGGCTGGAAAATATATACGGTAGCTCTACAGTACCCTCCGG TGTGGAAAGAGGCGGAGAAATCTGCAGTGTTTTTCCCCCGAGGTCGTGAA CAGCGGGAACAAAAGGAAATGTCCAACGCGACTTTTAATACGGAGTATAA AACGTTGCCGAACCATACTCCATGTTGCCCCAAAACACTCAGTGTTTTAT CATTCTAGGTGCAAGAAGTCAGAGTCCAGACGGTGATACTCCGTCTGCCA TGTGACCTCTTTTCAAGTTTGAAATCGGTCGGTACAATCCTCTCCATAGG TACAATCTTCTCCATTAGAAGAAGTTGTTGTCCTTCATCACGCTAGGACA AATCTTCTTCACTACAGTCCCACGCCACCAGCGCGCACGCGGGGTATTTC CCACGGTGTCCCCCATTGCCGCCTTCGATGGCAAGTGCTCCATTTTGTTT GTATCGAGCCATCCATGGCGCATTTTGCAGTACCGTTTCAAAGCGGAGAG AGTTCCCCGCATCCACGCCGTGAGTGCGTCTTGCAGAATTCGCTCCGCTT TGAAACAAAGTGAATCCAGGAAGCGATTCTTATCTACAGTGCGTAGGACA GCTGTAACCGCCGAGTACACGCTGCCTGGGCCTCCGTGGTTTTACACGCA TTGAACGTCGCTCTGACCTCGCCGCACCCACGGCATCCACGGCATTTTTT TCACTCGTCACTCCACTTCTACGAGGTGCGCGAGTTATACCGGACGGGTT TTGCGTTACTCCCTGACCCCCTCCTACCCTCTCTAAGCTCGTGGTTCAAG CAACAGCAACTTAAGGTAAAGTCCGTGCAGGATCACACCTCTGCTTTACC CACCTCGTTTGTTTCCCTTGTCCATCCACCACAGTAGTCTACGCGCGGCT TTTAGCCAGGCGGGTTTATCACCATGGCAGAGATTGACCAGTATTTCCCC CGAGCACTCTGCTTCAGCAGCAGCAATTAACGGTCAAATGTTTGCACCAC ACATCGCGTCCCCAGCTTCTATCACCGAGAAAGAAAGGGGAAGTACGTGG AGCGTGACGCCGCGAACATGAAGGTTCGCGAGGACCCATTACACCGATCT GTCATCGCCGTCCACGTCGCGGGCTTAGCAGCACAGCAGCGTTACACGGC CTCATACTATTATGTGCAAATTATAGTATTGTGGGCTTGCTTCTTGATCC CACCAGTTCCGCTGGTGCGATACTTAGGGTTGGCGGCGCGTATTGAACAA CGGAGACGGGGCGATGAGCACTGAGCCCCGCAGCACGGCAAACCATCCCC TGACTCCGCCCGACCGAGAGACGAGGTCTTTTCTTCTGATCGTCGACTCA TCGTGGCGCGAGAAGGACCCGCCTACATGTAGTGCACACGGTCCTGGAAT CAGAGACATGGCGGCCGTTGCTGTGACACGTAAGTTACAACCCTTGGTCG TAAGCTTACGGCGATCCTCCAGAGGAAGATCTCACTGTCGAATCCCACGT CCTGTGGCCATTTTGCCTCTCAGAGGAATCGAAAGCCTTGGCCTGGAGCT CTGATACGGGGGAAAAAATCAAGAGATGGCTCACTTAACAAGTGTCTCCT TTGAACCGGCGGAATCGCAGGACCAAGCCGACGGATCGAAGCAGACGGGG ACTTATCCTCAGTGACAGATGGTCTGCCACTCTTGATGCGTCTCGAACGT TCTTTTTTCGACCGCAGGTGCTGGAGGGACTTCGTCTTGGGCGTCGTTCG ACTGCGGAACGTCGAGGTTCTGGCTAGTCACTCGAGTTTTTCTCCTAATA TAACCTACACGTCGCACGAAGAGGATCATCCGCTTCGCTTGAGACTCAAT GGCCCCTTACGCAAACCGCTCTTATGCCCTGTGGCCTCGGCCATTAAAAA TATTTCCTTGCCCTATGCGGCGAGTCTGCATTGCGCTTTTCGCGCTTTTC GCGCTCGGATTCAATCAAAACGGCAGACAAATTTTACTCACGAGAGAGCA GCCGCTTCTAGGTCGAGGAATCACTCCCCGGTCAGCCAACGGCAAATTAA ACTGGAGGCTTAAAAGCCAGCTATCAAGAGTACTCGTTGGTCCTTCGTTA GTGTGCATGCGCCACTCGCACACTATAATATAAAGCATATTTCACGCACC TCGTGAAATCAAGAGTAGCACACTGGGAACGGTACCAGGTATGTGCAGTC CCCCTCTCCAGACGCATGAAAAGGGGCCACAGAAATTCTCCGAGTACTTT CGCTCAGTGAGTATGAAACGGAAGGCCCAGCTCTGTTTCTGGATAGAGAC TACACCCACGAACTACGAAGGACTGCCTTCGCGCGTTCTTTCAAGGAGCA ATGTTATTACTGTCGAGCAGAGTTCGTCTCTCCGCTTTCCCCCTGCGAAA CTCTGCCATTTCCGTTACTCTCCGTATCTACTGACGTGCCCCTACCCTAC ACAAACCGGTAGATGGGCGAATATTTTACGTACATTTTGACTCCCCTCCC CCCTTCCCCGTCGCCTCCGATCCACACGCCCAACACGTTATCAAACAAAC GCGGCGCTCCAAGGTGCGGTATCGTCCAGGAGAGAAGTTCACGTGGCATC TGGACGCCCTCCCGCCAACCCCCGACCTGGCCTCGAAAGGAGGTCAGAGG ATCGCGACCCTCCTGGTGTACCTCACCGAGATGCCGGAGGAGGACGGCGG AGCGACAGCTTTCCGAGACCTGGGACCTCTTCGCGTTCGACCGCGTAAGG TGTGACGTCATGATTTAAAAAAAAAGGGAGAATCGCGTGCATCTAGTCTT TAGTGCGGAGATGACGCGTAACCAGTATCCCACGCCCCTCGTCCGGGAAG TGACACGACGAGGAGATCATCTTCCCGCGAGTGATTTTCGCAAGAATGAT TGAATTTGAAGTACTCTGCATAACCTTTTTTCCTTCCCAGGGCTCGGCGC TAATGTTCTTCCCCTCGTGTGGGGGAGCGCCCAACTGCCCCTTCGACATT CGGACTCTCCACGCCGGCGAGGTGAAGTAAAAGAAGCTGATACTGTCCGG TAGCCGCGTTTTGCGCTCTCGTGATGGGAAGTGCAGGCGGTCTTCTCTTC TCGACGGGCGATGGCCTTTCAGAGTGCTTTGAATGGCGAGAGTGTGATTC GTGCTCTGCATCTCGACCCAATAGCGAGCAACAGAGGTAGAGACGACCCA CCGTTTACTGGCCGCTGTTTCCGGCCACGAGTACCTGGGAGGCCAAAGTG TCTCTTCGTTTTGGGTCGCAACAATACATCTTCCTTCTACCGCACACCTA TGGATAGGGAGCGCCATGTGGGTCGGATAACGTCATGAAACGTTGCCGTT CCTTAGCCCAAAGCTCTAGTAATATAACCAAACGCGGTGAAGAAGAACCG CCATTCTCTTTATTTTTTGCGCAAGCCCTCACGGGCCGCTGAGGCAAGGG TCATGCTGGCCCTGGCCGCCCTCTGACTGCCCGATCGTCATAGCGATTGT TGGATTCTCATGAACGTAGAGACCAGGAAGAATCCAAACACTATTACAGT TAATTATTTTTGTCGACGCGGTTTACGTGCAGATGGTTAGATCTGGAGGG AAGCAAGACAAGTGGATCGCGCAACTCTGGCTCCGAGAGGGCCCGTACAC GCCGACGGTGCCGAAGGGTAACCGACACGCCGACGCTTCTTCCGTCGTGG CGGAATTTGACGCAACATGGCGACAAGCTGCGGCAGCTGCAGCATAATTA CTAGTATATTCAGCCGCGAAATTCTGAAGCGTGTAGTTTACAAGGGTGTG GCTGTCCGCTTGCTTTATACTCGGGTGTCCATATTTCGTGCTTGTCTTGG TATGGCCTCCTCACAACGTTGAGGGTGGGAGTATAATTGGCAACTGGGGG GGGAGGGGCGATTTGCTGTAGGCCATGCACCGCATAGTTTGCTGGACGTG TTTATTGCGAGCAAAGCGAGCTTCTAATCTGCAAAG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig87:143248..149333+

>mRNA_A-nodosum_M_contig87.8.1 ID=mRNA_A-nodosum_M_contig87.8.1|Name=mRNA_A-nodosum_M_contig87.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1350bp|location=Sequence derived from alignment at A-nodosum_M_contig87:143248..149333+ (Ascophyllum nodosum dioecious)
ATGTTCTCCATCAACATGGCTGCCAAGGGCAACAACGGGAACACGACGAA
AAACGCCAAAAAAGGCCCTCGTCGATCCGCCGGAGACAGGAATACGAAAG
GAAGTGTCGGAGGTGGTGGCGGTGGTGGTGGAGGTGGCGGCGTTGGGTTT
GGTGCTTCTTCTGGTCTCGCGACCTCAACCGCCACTCCGACCGCTACCGA
TCCGACCCTTACTTCCGAGGTGAAAACCACGCCGAGGGAAACAACGGCAG
CTTCTCCAGGGACGGCGAGTCGGCAAAATTTCGCTCCGCAGCAGGCAGAA
TTGCCAGACGACGACTTCGCCACGTTCCCGCCGCTGTCTCCCGCCACTCT
CGAGTCTGTCATGGGGGTGGACGTGTTCGACCTCCCGGAAGGCGGCGTCA
CCGCTCGCGAGGAGGGGCAGGAAACTGCGCTTCCCCGTCAGGTGCTGGAG
TGCATTCGGGATCGCCACGGTATGTTAGAGTTTGGCGGTGGGCGGAAGCT
TTTGGACGCGGAATACTGCGACCCCAATAGCGACGAAAATAAGGCAGGGG
GCATGGGCGGAACGGATGAAGAAGAGCATCGCCGGCCACGACCTCTGCTG
CTGTTCCCCGGGTTGAGGCTACTGCACGCCGAGCCGCCCGTGATCGGAGT
CGACGATTTCTTCACCGCCGAGGAGTGTGACGCCTACGTTTCAAGGTCGC
TCTCGCCCGCGCCCGCGCCGCTCGCTGACGGTGGTTCTGATGTAGCGCGA
CCGCACATGCAGCGGAGCGCGACGCTAGGGGCGGATGTGGATTCGGTGGC
CCAGCGAACGTCGACGACCTGGTTCCACCGCTATTCGGCCGTGCCTGAGC
TCATGGCCAAGGCCTCTGCTCTAGTCGGCATCCCCTTCGACGAGGGGCGG
TGGGAGGAGGCGCAGACGGTGCGGTATCGTCCAGGAGAGAAGTTCACGTG
GCATCTGGACGCCCTCCCGCCAACCCCCGACCTGGCCTCGAAAGGAGGTC
AGAGGATCGCGACCCTCCTGGTGTACCTCACCGAGATGCCGGAGGAGGAC
GGCGGAGCGACAGCTTTCCGAGACCTGGGACCTCTTCGCGTTCGACCGCG
TAAGGGCTCGGCGCTAATGTTCTTCCCCTCGTGTGGGGGAGCGCCCAACT
GCCCCTTCGACATTCGGACTCTCCACGCCGGCGAGATGGTTAGATCTGGA
GGGAAGCAAGACAAGTGGATCGCGCAACTCTGGCTCCGAGAGGGCCCGTA
CACGCCGACGGTGCCGAAGGGTAACCGACACGCCGACGCTTCTTCCGTCG
TGGCGGAATTTGACGCAACATGGCGACAAGCTGCGGCAGCTGCAGCATAA
back to top