mRNA_A-nodosum_M_contig87.8.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 513 bits (1322), Expect = 6.160e-173 Identity = 259/379 (68.34%), Postives = 283/379 (74.67%), Query Frame = 2
Query: 617 APQQAELPDDDFATFPPLSPATLESVMGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMLEFGGGRKLLDAEYCDPNSDENKAGGMGGTDEE-------------------EHRRPRPLLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVAR------------PHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEFDATWR 1660
A + +LPDDDFATFPPLSP TL+S+MGVDVFDLP GG+ A E GQ+ ALP QVLECIR RHG+ EF GGR+LLD EY + + A G + + LLFPGLRLLHAEPPVIGV DFFT EECD Y+SRS+SP PHMQRSATLGADVD+VAQRTSTTWFHR+SAVPELMAKASALVG+PF+EGRWEEAQTVRYRPGEKFTWHLDALPP PDLASKGGQRIATLLVYLTEMPE DGGATAFRDLGPLRVRPRKGSAL+FFPS GGAP+CPFDIRTLHAGE+VR G +QDKWIAQLWLRE YTPTVPK NRH A+S VAEFD W+
Sbjct: 197 AARGGQLPDDDFATFPPLSPDTLKSIMGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEFDKIWQ 575
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 8.600e-164 Identity = 241/349 (69.05%), Postives = 264/349 (75.64%), Query Frame = 2
Query: 695 MGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMLEFGGGRKLLDAEYCDPNSDENKAGGMGGTDEE-------------------EHRRPRPLLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDV--------ARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEFDATWR 1660
MGVDVFDLP GG+ A E GQ+ ALP QVLECIR RHG+ EF GGR+LLD EY + + A MG + + LLFPGLRLLHAEPPVIGV DFFT EECD Y+SRS+SP + PHMQRSATLGADVD+VAQRTSTTWFHR+SAVPELMAKASALVG+PF+EGRWEEAQTVRYRPGEKFTWHLDALPP PDLAS+GGQRIATLLVYLTEMPE DGGATAFRDLGPLRVRPRKGSAL+FFPS GGAP+CPFDIRTLHAGE+VR G +QDKWIAQLWLRE YTPTVPK NRH A++VVAEFD W+
Sbjct: 1 MGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLQEFAGGRRLLDPEYYGADGEAGDAALMGSXXXXXXXXXXXXXXXXXXXXXXGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEFDKIWQ 349
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 285 bits (730), Expect = 1.060e-85 Identity = 147/248 (59.27%), Postives = 177/248 (71.37%), Query Frame = 2
Query: 929 LLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADG----GSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
L F R+LH +P V+ VDDFFT EECDA ++RS + AD G+ + + +S T+G D + AQRTSTTWFH Y+ VPELMAKA L+GI D +EE QTVRYR E FTWHLDAL PTP+LA KGGQR ATLLVYLT++ E+DGGAT FRDLG PL+VRP+KGSAL+FFP+ GG P+ P D+RTLH GE V S +QDKWIAQLWLRE PYTPT P GN HA ASS ++++
Sbjct: 232 LKPFSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVIT--ADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGIN-DISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVASDAEQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 277 bits (709), Expect = 3.810e-84 Identity = 158/359 (44.01%), Postives = 204/359 (56.82%), Query Frame = 2
Query: 572 ETTAASPGTASRQNFAPQQAELPDDDFATFPPLSPATLESVMGVDVFDLPEGGVTAREEGQETALPRQVLECIRDRHGMLEFGGGRKLLDAEYCDPNSDENKAGGMGGTDEEEHRRPRPLLLFPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGPLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGK-QDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
+T A +P A + + ELP+D F+ FPPL+P +++ G+ TA P +V + IR+RHG F DE+ LFPG+RLLHA+P V V+ FFT +ECDAY++ S G + P +SAT + TSTTWFH Y++ PEL+AKAS L+G+ D +WEE QTVRYRPGE+F WHLDALPP+ ASKGGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGE+V G K ++K+IAQLW + PY P+VP+G+ H A + ++
Sbjct: 45 KTPAKAPYPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPA-------------GKATAFPVEVADRIRERHGFEHF---------------------------DEK---------LFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLA----PTELQSATTSSQCQQXX--TSTTWFHHYASAPELVAKASLLLGVD-DYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 347
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 273 bits (699), Expect = 5.480e-84 Identity = 134/241 (55.60%), Postives = 171/241 (70.95%), Query Frame = 2
Query: 938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
F R+LH +P V+ VDDF T++ECD V+ + +P D ++ A + +S T+G D+ S +QRTSTTWFH Y +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PE GG+T FRDLG PL+V P+KGSAL+FFP+ GG PN PFDIRTLHAGE V + DKWIAQLWLRE YTPT P GN HA A+ ++++
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPK----YDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLD-NIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 273 bits (699), Expect = 1.220e-82 Identity = 134/241 (55.60%), Postives = 171/241 (70.95%), Query Frame = 2
Query: 938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
F R+LH +P V+ VDDF T++ECD V+ + +P D ++ A + +S T+G D+ S +QRTSTTWFH Y +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PE GG+T FRDLG PL+V P+KGSAL+FFP+ GG PN PFDIRTLHAGE V + DKWIAQLWLRE YTPT P GN HA A+ ++++
Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPK----YDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLD-NIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 274 bits (701), Expect = 6.160e-82 Identity = 142/241 (58.92%), Postives = 171/241 (70.95%), Query Frame = 2
Query: 938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGP-----LRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
F R+LH +P VI VDDFFT EECD Y++ +S A DG + M RS T+G D + +QRTSTTWFH Y VPELMAK+S L G+ D G +EE QTVRY+P +KFTWHLDAL P + SKGGQR ATLLVYLT++ EDGGAT FRDLGP L+V+P+KGSAL+FFP+ GG PN PFDIRTLHAGE+V + K DKWIAQLWLRE Y PTVP N HA A+ ++++
Sbjct: 202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIA--MSDPTAGNKDGDAV-----MTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLD-DIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKSDKWIAQLWLREDSYEPTVPPENVHAAATEPISQY 434
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 267 bits (682), Expect = 4.380e-81 Identity = 133/240 (55.42%), Postives = 164/240 (68.33%), Query Frame = 2
Query: 938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQRSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLG-----PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAE 1642
F R+LH +P ++ +DDF T ECD Y+S + +P D ++ A + +S T+G D+ S +QRTSTTWFH Y + LMAKAS L+G+ E RWEE QTVRYR EKFTWHLDAL P+ +L GGQR+ATLLVYL ++P+ GG+T FRDLG PL+V+P+KGSAL+FFP+ GG PN PFDIRTLHAGE V DKWIAQLWLRE YTPT P GN H A V+E
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPK----YDKNANTAPMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIE-RWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESDDDKWIAQLWLREHVYTPTAPPGNSHEAAVEAVSE 291
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 269 bits (687), Expect = 1.880e-79 Identity = 139/247 (56.28%), Postives = 170/247 (68.83%), Query Frame = 2
Query: 938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQ-----RSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLA---SKGGQRIATLLVYLTEMPEEDGGATAFRDLG---PLRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
F R+LH +P VI VDDFFT+EECD YV S+ A+ D +Q +S T+G D S AQRTSTTWFH Y+ VPELMA+A+ L+G+P R+EE QTVRYR EKFTWHLDAL +PD+A S GQR++TLLVYLT++ E+GGAT FRDLG PL+VRP+KGSAL+FFPS GG P+CPFDIRTLH GE V +KWIAQLWLR+ YTPT P G+ H A+ + E+
Sbjct: 229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSID------AENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLP-GISRFEEPQTVRYRRSEKFTWHLDAL--SPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGEDAPNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEY 466
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Match: A0A448ZM68_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZM68_9STRA) HSP 1 Score: 265 bits (678), Expect = 3.080e-78 Identity = 138/249 (55.42%), Postives = 165/249 (66.27%), Query Frame = 2
Query: 938 FPGLRLLHAEPPVIGVDDFFTAEECDAYVSRSLSPAPAPLADGGSDVARPHMQ-RSATLGADVDSVAQRTSTTWFHRYSAVPELMAKASALVGIPFDEGRWEEAQTVRYRPGEKFTWHLDALPPTPDLASKGGQRIATLLVYLTEMPEEDGGATAFRDLGP------------LRVRPRKGSALMFFPSCGGAPNCPFDIRTLHAGEMVRSGGKQDKWIAQLWLREGPYTPTVPKGNRHADASSVVAEF 1645
F + +LH +P V+ +DDFFT EECD YV SL AP+ D GS + RS T+G D ++ +QRTSTTWFH Y VPELM+KAS LVG+ + RWEE QTVRY+ EKFTWHLDAL P A KGGQR+ATLLVYL ++ E GGAT FRDL P L+V+P+KGSALMFFP+ GG P PFDIRTLH GE+V + DKWI+QLWLR YTPT P GN H +A V E+
Sbjct: 221 FEKINVLHLDPLVLSIDDFFTEEECDRYVEMSL----APVTDEGSQKTMDSFKTRSKTVGKDKNAKSQRTSTTWFHHYKNVPELMSKASRLVGLDTID-RWEEPQTVRYKRNEKFTWHLDALAPDQSTAEKGGQRLATLLVYLKDL--ESGGATIFRDLTPATGETDDNASGFLKVQPKKGSALMFFPAAGGIPGAPFDIRTLHCGEVVPGASETDKWISQLWLRATXYTPTAPPGNLHEEALDRVKEY 462 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig87.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig87.8.1 >prot_A-nodosum_M_contig87.8.1 ID=prot_A-nodosum_M_contig87.8.1|Name=mRNA_A-nodosum_M_contig87.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=450bp MFSINMAAKGNNGNTTKNAKKGPRRSAGDRNTKGSVGGGGGGGGGGGVGFback to top mRNA from alignment at A-nodosum_M_contig87:143248..149333+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig87.8.1 ID=mRNA_A-nodosum_M_contig87.8.1|Name=mRNA_A-nodosum_M_contig87.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6086bp|location=Sequence derived from alignment at A-nodosum_M_contig87:143248..149333+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig87:143248..149333+ >mRNA_A-nodosum_M_contig87.8.1 ID=mRNA_A-nodosum_M_contig87.8.1|Name=mRNA_A-nodosum_M_contig87.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1350bp|location=Sequence derived from alignment at A-nodosum_M_contig87:143248..149333+ (Ascophyllum nodosum dioecious)back to top |