mRNA_A-nodosum_M_contig847.12.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: D7G118_ECTSI (Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G118_ECTSI) HSP 1 Score: 352 bits (902), Expect = 6.570e-122 Identity = 182/196 (92.86%), Postives = 184/196 (93.88%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGGASNTTSSSSKCC 588
DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDK VD+AAAKE+AESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTV LGG KCC
Sbjct: 7 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVNLGGXXXXXXXXXKCC 202
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA) HSP 1 Score: 329 bits (844), Expect = 5.220e-113 Identity = 175/200 (87.50%), Postives = 181/200 (90.50%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNS----TVQLGGASNTTSSSSKCC 588
DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESF HVNDWLSEVNRYASEGTSKLLIGNKSDR DKAV T AK FA+SLGIPFLETSAK+ASNVEEAFLTMASELIRTREARAA Q ++S TVQL ++ SS KCC
Sbjct: 7 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 206
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: A0A7S3VAP6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP6_9STRA) HSP 1 Score: 305 bits (781), Expect = 2.360e-103 Identity = 160/199 (80.40%), Postives = 169/199 (84.92%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAAT--QVDNSTVQLGGASNTTSSSSKCC 588
D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQ+SFDHVNDWL EVNRYASEGT KLL+GNKSDR DK V AKEFA+ +GIPFLETSAK+A+NVEEAFLTMASELI+ R AR T D VQLGG S CC
Sbjct: 12 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTTDKVVTAEQAKEFADDIGIPFLETSAKSAANVEEAFLTMASELIKQRIARGGTAEDADGDNVQLGGGKRAKEMMSNCC 210
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: W7TI50_9STRA (Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI50_9STRA) HSP 1 Score: 299 bits (766), Expect = 4.710e-101 Identity = 155/194 (79.90%), Postives = 167/194 (86.08%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGGASNTTSSSSK 582
D LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF+H+ DWL+EVNRYASEGT KLL+GNKSDR DK V T AK+FA+ LGIPFLETSAKNASNVEEAFLTMA ELIR REA+ A G + +T S SSK
Sbjct: 7 DFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAAPGPGGAASGKSGDTVSLSSK 200
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: F0YFR6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFR6_AURAN) HSP 1 Score: 298 bits (764), Expect = 7.460e-101 Identity = 156/199 (78.39%), Postives = 171/199 (85.93%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDN---STVQLGGASNTTSSSSKCC 588
DHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS ESFDHV+DWL+EVNRYA+EGT KLL+GNK D EDK V T AAKE+A+ LGIPFLETSAKNA+NVEEAFLTMA ELIR REA + + S ++L G S+ T KCC
Sbjct: 7 DHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREASQSAKPGAGGASGLKLSGGSSRTK---KCC 202
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: A0A7S2Y0T5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T5_9STRA) HSP 1 Score: 294 bits (752), Expect = 4.360e-99 Identity = 148/196 (75.51%), Postives = 173/196 (88.27%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGGASNTTSSSSKCC 588
D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D+KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYD+T +E+FDHVNDWL+EV+RYA E T KLL+GNKSDR D+AV+T AKE+A+ LGIPF+ETSAK+A+NVE+AFLTMA +LI R+A+ + N V LGG S++TS +CC
Sbjct: 7 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKLDQKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDITHKEAFDHVNDWLAEVDRYAGESTCKLLVGNKSDRTDRAVETQTAKEYADELGIPFIETSAKSAANVEQAFLTMAKQLIELRQAKGVEE-SNQNVSLGGKSSSTSLP-QCC 200
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: A0A7S1GR15_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR15_CYCTE) HSP 1 Score: 294 bits (752), Expect = 6.370e-99 Identity = 153/185 (82.70%), Postives = 161/185 (87.03%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGG 552
D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS ESFDHVNDWL EVNRYA+EGT KLL+GNKSDR DK V AKEFA+ LGI FLETSAK+A NVEEAFLTMA ELIR R+AR T S + L G
Sbjct: 16 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRVADKVVTEEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIRQRDARGITSDGKSGIDLSG 200
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: A0A7S1XNK2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNK2_9STRA) HSP 1 Score: 293 bits (750), Expect = 7.160e-99 Identity = 152/197 (77.16%), Postives = 170/197 (86.29%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGGASNTTSSSSKCC 588
DHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTV+IDKK VKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT+QESF+ + WL+EVNRYA+EGT KLL+GNKSDR ED+ V TA +E A+SLGIPFLETSAKNA+NVEEAFLTMASELI +RE R D++ +QLG + + KCC
Sbjct: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVRIDKKVVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNQESFNSITAWLNEVNRYATEGTCKLLVGNKSDRDEDRIVTTAQGEEMAKSLGIPFLETSAKNAANVEEAFLTMASELITSREERGGATGDDANLQLGSSGG---GNGKCC 194
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: A0A7S3JUQ1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUQ1_9STRA) HSP 1 Score: 292 bits (747), Expect = 3.200e-98 Identity = 154/203 (75.86%), Postives = 174/203 (85.71%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARA------ATQVDNSTVQLGGASNTTSSSSKCC 588
DHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK++ KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHV +WL+EVNRYA+EGT KLL+GNKSD +K V T AKE+A+SLGIPFLETSAKNA+NVEEAFLTMA+ELI+ RE+++ T S ++L G T SS+ KCC
Sbjct: 8 DHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVEGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVAEWLAEVNRYANEGTCKLLVGNKSDMGTEKCVSTETAKEYADSLGIPFLETSAKNATNVEEAFLTMAAELIKLRESKSNASGKGGTSTTASGLKLSG---TRSSNKKCC 207
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA) HSP 1 Score: 291 bits (746), Expect = 5.040e-98 Identity = 151/185 (81.62%), Postives = 160/185 (86.49%), Query Frame = 1
Query: 1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGG 552
DHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS++SFDHVNDW+ EVNRYASEGT KLL+GNKSDR DK V AKEFA+ LGI FLETSAK+A NVEEAFLTMA ELI+ R R + D V L G
Sbjct: 15 DHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADKIVKEEEAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIKQRAERGSNGDDKQKVSLNG 199 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig847.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig847.12.1 >prot_A-nodosum_M_contig847.12.1 ID=prot_A-nodosum_M_contig847.12.1|Name=mRNA_A-nodosum_M_contig847.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=197bp DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKback to top mRNA from alignment at A-nodosum_M_contig847:197408..204298- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig847.12.1 ID=mRNA_A-nodosum_M_contig847.12.1|Name=mRNA_A-nodosum_M_contig847.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6891bp|location=Sequence derived from alignment at A-nodosum_M_contig847:197408..204298- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig847:197408..204298- >mRNA_A-nodosum_M_contig847.12.1 ID=mRNA_A-nodosum_M_contig847.12.1|Name=mRNA_A-nodosum_M_contig847.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=591bp|location=Sequence derived from alignment at A-nodosum_M_contig847:197408..204298- (Ascophyllum nodosum dioecious)back to top |