mRNA_A-nodosum_M_contig1145.1.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: A0A6H5JAJ0_9PHAE (OHCU_decarbox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAJ0_9PHAE) HSP 1 Score: 247 bits (631), Expect = 3.550e-77 Identity = 122/148 (82.43%), Postives = 133/148 (89.86%), Query Frame = 1
Query: 1 RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLL 444
RCCHSNAWADAVL PFKSEEEA+ A+D W LSP+DYLEA+AAHPAIGDK+ LRD+FAPSRSGWE +EQAA+AGASEAVLDELSELN+ YR KNGFVFLVCA+G PAD ILALLKARLPNDR+TEIRNAVEEQRKITQLRF RLL
Sbjct: 18 RCCHSNAWADAVLGRMPFKSEEEAQAAMDDCWAKLSPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDKEQAAAAGASEAVLDELSELNEEYRQKNGFVFLVCASGMPADAILALLKARLPNDRDTEIRNAVEEQRKITQLRFARLL 165
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: UPI0003826855 (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI0003826855) HSP 1 Score: 146 bits (368), Expect = 1.960e-38 Identity = 72/148 (48.65%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 1 RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLL 444
+CC S+AW + + A P+++ + A DR W +L DYLEA HP IGD LR ++A +++ G EQ+ + A+E L L+E N AY +K GF+F+VCATGK A+ +L LL RLPNDRETE+RNA EEQRKITQ+R +L+
Sbjct: 20 QCCTSSAWVERMTATRPYQNADSLFEAADRHWAELGEPDYLEAFEGHPKIGDVNSLRAKYANTKA-LAGAEQSGVSAATEQTLQALAEGNTAYEEKFGFIFIVCATGKSAEEMLELLNQRLPNDRETELRNAAEEQRKITQIRLGKLV 166
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: A0A835YUP2_9STRA (Putative OHCU decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUP2_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.070e-38 Identity = 80/149 (53.69%), Postives = 95/149 (63.76%), Query Frame = 1
Query: 1 RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLLA 447
RCC N WAD VL PF SE +ARN LD W + P ++LEA +AHP IG D PS GWE EEQ +A A + VL L E N+ Y DK GFVFL+CATGK AD +LA L+AR + TE+ A EE RKITQ+RFT+LLA
Sbjct: 25 RCCTCNRWADEVLRHMPFSSESQARNTLDACWAAMGPQEWLEAFSAHPRIGAGG--GDHKKPS--GWEAEEQKGAATAGQQVLQGLREWNRKYDDKFGFVFLICATGKSADEMLAALRARYHHHASTEMAVAAEEHRKITQIRFTKLLA 169
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: A0A6G8DA25_9GAMM (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=2 Tax=Microbulbifer TaxID=48073 RepID=A0A6G8DA25_9GAMM) HSP 1 Score: 139 bits (351), Expect = 5.710e-36 Identity = 74/148 (50.00%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 4 CCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLLA 447
CC+ N WAD + APF S E+ +N R W L DYLEA AAHP IGD + L ++FA + G Q A A AS L+EL LN+ Y + GF+F+VCA+GKPA +LA +K+R+ N RE EIRNA +EQ KITQLR +L A
Sbjct: 24 CCYCNRWADQLQEFAPFASVEQLQNIAARVWAYLDEGDYLEAFAAHPRIGDLQRLHEKFASAEQG-----QVALADAS--TLEELRRLNRVYFETFGFIFIVCASGKPAREMLAAIKSRIANSREQEIRNAADEQAKITQLRLGQLFA 164
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: UPI001CFDC55B (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Microbulbifer aggregans TaxID=1769779 RepID=UPI001CFDC55B) HSP 1 Score: 139 bits (350), Expect = 8.990e-36 Identity = 71/148 (47.97%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 4 CCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLLA 447
CCHS+ WA+ +L L P +S + +N ++W+ L +DYLEA AAHP IGD + L+++FA S EQ A A E L EL +LN AY +K GF+F++CATGK A +LA +K+R+ N RE EI NA EQ KIT+LR L A
Sbjct: 24 CCHSSRWAERLLELGPVRSVGQIQNRAFKAWSKLQETDYLEAFAAHPRIGDLQRLKEKFARS-------EQGQVAHADETTLKELQQLNDAYFEKFGFIFIICATGKSAREMLAAIKSRISNSREQEIGNAAAEQEKITRLRLENLFA 164
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: A0A0G4FQZ7_VITBC (OHCU_decarbox domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FQZ7_VITBC) HSP 1 Score: 139 bits (349), Expect = 1.410e-35 Identity = 73/147 (49.66%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 1 RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRL 441
+CCHS+ WA + L PF S +E A DR W++LS D+LEA HP IGD +LR +FA + + E E QA + ASEAVL L E N Y+ +NGF+F+VCATGK A +LALL+ RL N+R E+ NA EQ KIT+LR ++
Sbjct: 22 QCCHSSRWAIRMETLRPFASLDELEAAADRIWDNLSEPDWLEAFRGHPKIGDVDQLRQKFAATAAMCENE-QAGARSASEAVLRRLKEGNDQYQGQNGFIFIVCATGKSAGEMLALLEERLKNNRRVELANACAEQAKITKLRLRKV 167
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: A0A2A4MZ59_9BACT (OHCU decarboxylase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2A4MZ59_9BACT) HSP 1 Score: 138 bits (347), Expect = 2.310e-35 Identity = 66/148 (44.59%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 1 RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLL 444
+CC S W + PF SE E N +++W++ S D+LEA + HP +GD L+ +FA + S W GEEQ+ + A+ +++EL+ NKAY +K GF++++CATGK A T+L++L+ RL NDRETE++ A+ EQ KIT LR +LL
Sbjct: 20 KCCGSTTWVTRMAEKHPFTSENELFNIAEQTWHECSNEDWLEAFSHHPKLGDLGSLKKKFA-NTSEWAGEEQSGANSATPEIIEELAVANKAYEEKFGFIYILCATGKTAKTMLSILRVRLNNDRETELKMAMVEQNKITVLRLEKLL 166
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: UPI0016750805 (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI0016750805) HSP 1 Score: 137 bits (346), Expect = 3.140e-35 Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 1 RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLL 444
+CC S W +L PF + A D++W DL+ DYLEA HP IGD L+ ++A +++ G EQ+A AS+ VL L+E N+AY DK GF+F+V ATGK A +L LL+ARLPNDR+TE+RNA EEQRKI QLR LL
Sbjct: 20 QCCTSEKWISRLLQARPFADAQGLAAAADKAWRDLAEIDYLEAFDGHPKIGDVNSLKAKYANTKA-LAGGEQSAVDTASDEVLAALAEGNRAYDDKFGFIFIVFATGKSAAEMLELLQARLPNDRDTEMRNAAEEQRKIFQLRLETLL 166
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: A0A261GHE8_9GAMM (OHCU decarboxylase n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHE8_9GAMM) HSP 1 Score: 137 bits (344), Expect = 6.120e-35 Identity = 68/148 (45.95%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 1 RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLL 444
+CC S+AW + + A P+ E DR W +L SD+LEA HP IGD LR ++A +++ G EQ+ A++ L L++ N AY +K GF+F+VCATGK A+ +L LL RLPNDR+TE+RNA EEQRKIT++R +L+
Sbjct: 20 QCCTSSAWVERMAASRPYMGAESLFKIADRHWAELGESDFLEAFEGHPKIGDVNSLRAKYANTKA-LAGAEQSGVNVATDETLKALADGNTAYEEKFGFIFIVCATGKSAEEMLELLNQRLPNDRDTELRNAAEEQRKITRIRLEKLV 166
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Match: UPI00199ADACE (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI00199ADACE) HSP 1 Score: 136 bits (343), Expect = 9.340e-35 Identity = 71/148 (47.97%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 1 RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIGDKKELRDRFAPSRSGWEGEEQAASAGASEAVLDELSELNKAYRDKNGFVFLVCATGKPADTILALLKARLPNDRETEIRNAVEEQRKITQLRFTRLL 444
RCC ++ W D +L L PF ++ A D+ W SD+LEA +P IGD+ R +FA S + W EQ+ ++ A+EAVL LS+ N Y K GF+F+VCATGK AD +LALL+ARLPNDR TE++ A EQ KIT LR + L
Sbjct: 21 RCCGASHWVDGMLVLRPFSTDTALMKAADQVWAGTGESDWLEAFTHYPKIGDRDSRRQKFA-STAEWASHEQSGASAANEAVLTALSDGNLNYEAKFGFIFIVCATGKSADEMLALLQARLPNDRATELQIAAGEQHKITLLRLEKWL 167 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1145.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1145.1.2 >prot_A-nodosum_M_contig1145.1.2 ID=prot_A-nodosum_M_contig1145.1.2|Name=mRNA_A-nodosum_M_contig1145.1.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=179bp RCCHSNAWADAVLALAPFKSEEEARNALDRSWNDLSPSDYLEAIAAHPAIback to top mRNA from alignment at A-nodosum_M_contig1145:6246..8840+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1145.1.2 ID=mRNA_A-nodosum_M_contig1145.1.2|Name=mRNA_A-nodosum_M_contig1145.1.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2595bp|location=Sequence derived from alignment at A-nodosum_M_contig1145:6246..8840+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1145:6246..8840+ >mRNA_A-nodosum_M_contig1145.1.2 ID=mRNA_A-nodosum_M_contig1145.1.2|Name=mRNA_A-nodosum_M_contig1145.1.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=537bp|location=Sequence derived from alignment at A-nodosum_M_contig1145:6246..8840+ (Ascophyllum nodosum dioecious)back to top |