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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1045 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 1044 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866527.0561004-CDS-A-nodosum_M_contig113:579006..579330 | 1680866527.0561004-CDS-A-nodosum_M_contig113:579006..579330 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig113 579007..579330 - |
| 1680866527.068873-CDS-A-nodosum_M_contig113:579465..579561 | 1680866527.068873-CDS-A-nodosum_M_contig113:579465..579561 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig113 579466..579561 - |
| 1680866527.0816033-CDS-A-nodosum_M_contig113:579730..579802 | 1680866527.0816033-CDS-A-nodosum_M_contig113:579730..579802 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig113 579731..579802 - |
| 1680866527.0972185-CDS-A-nodosum_M_contig113:586874..587426 | 1680866527.0972185-CDS-A-nodosum_M_contig113:586874..587426 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig113 586875..587426 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig113.65.2 >prot_A-nodosum_M_contig113.65.2 ID=prot_A-nodosum_M_contig113.65.2|Name=mRNA_A-nodosum_M_contig113.65.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=348bp
STPEPTTATPNPTSATPEPALSTPEPTLATSEPALATSEPTTATPEPTPM
TPEPTVPTPEPTTTLPTVPTSEPTVVTPEPTSATPEPSAMTPEPSASASV
PTATTPQPALVTPEPTVAPSDTTPDPTVATPDPTVATLDPTVETPEPTAE
PVPAPTAEPIPPPTDVPVQTPEPTTASTPEPTTEVTQPSAPPVATPTAPP
VTPSTTAPVAQPSAPPVEPPTATPVTPTTTPPVSTPSSCPVVLPSVPPLT
PPTAPPEASPTSPPVASPTSPPVASPTAPPVASPTAPPVALPTAPPVASP
TAPPVTSPTTPPIELPTEPPVATPTAPPLASPTAPPVASPTAPPVESP back to topmRNA from alignment at A-nodosum_M_contig113:579007..587426- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig113.65.2 ID=mRNA_A-nodosum_M_contig113.65.2|Name=mRNA_A-nodosum_M_contig113.65.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8420bp|location=Sequence derived from alignment at A-nodosum_M_contig113:579007..587426- (Ascophyllum nodosum dioecious)
TCCACTCCGGAGCCAACTACGGCGACACCTAATCCGACATCGGCGACTCC
GGAGCCTGCGTTGTCGACGCCGGAGCCCACCTTAGCGACGTCGGAGCCCG
CCTTAGCGACGTCGGAGCCCACGACTGCGACGCCGGAGCCAACCCCGATG
ACGCCTGAGCCGACCGTGCCAACTCCCGAGCCAACCACAACCTTACCGAC
CGTGCCAACCTCTGAGCCTACAGTGGTGACTCCAGAGCCGACCTCGGCAA
CGCCCGAACCTTCTGCCATGACTCCCGAACCTAGCGCGTCGGCTTCCGTA
CCTACCGCGACTACTCCCCAGCCTGCCCTGGTGACGCCCGAGCCAACTGT
CGCACCGTCTGATACTACGCCTGATCCAACAGTCGCAACGCCTGATCCTA
CCGTCGCAACGCTTGATCCCACCGTTGAGACTCCTGAGCCGACGGCAGAG
CCTGTACCTGCGCCAACAGCTGAGCCGATCCCCCCACCCACCGATGTGCC
CGTCCAGACACCGGAGCCTACGACAGCGTCTACGCCTGAGCCTACAACCG
AGGTGAGAGGTTGTTTTATCACGTGTCTTGTTTTTTCCGGAAGGTGCAAT
TAATAGATCGGAGTTTGCACGATCGAAGCGCGCCACATCGAAACGCTTCT
TTCGCGATTCCGCATTTGCGTGCCGTACGCGCAGTAGCTTTAGTGACCAC
CTTGCTCTGATGTCTGACTGCCTGTACCCATTTTCCCTCATTTTACGCGA
AGGGGCGGCAAACGTTTTTAAAGATACGATGAAAGTGCTGTTTCGAAGGC
ATACGTTCATGTCCTGTAGCGATCAAACACGTCTTTTTACTTTGGGTGAA
GCCAATCTCAATTGCTCGATATCCGTGATCCTAGGTGCTATACAGAGGAA
GTTCTGTAGCTTCAATGAGCAAATACCAACATAATCTTTAGGCCATTTTG
GACCCGAACCTCTATATACCAAATATCGGAACAATTGATCCACTCGGCGA
TTCTTGGTGAAACCAACCATTGAGCGGGCAATCCTGGCGTCCTGATCTAT
AGTGGTGTCTTATTTTTAACGAAATTCTTATGCAAACCTTCCGGCAGCGG
TTGATCCACGCCAACACGCAAACCGACTCTCGAGCGCCTCTCACACCCTT
TGGCAGTAGAGTCACGGTTATATAGTTGTACGAGAAAACGGCAGGTCGAA
CTACGACCGAAACTACAGCGTTTTCTTTTGCTGCCACCGCGGGAGCAACT
GTTCTCGCTCTGGCAACGTTGCCAGAGGTGGAGCCCACAGTACCGATTTT
GTGGTCCATATCACGCATCGCTTCCTGCCGCTTACGGAAGTCCTTTGTCC
TCCATCCAGTTGCCCGTCTGGCCGCGTTTCTTCGTTCGAATCGCTAGTTC
CAGTCTGTCGACCGACGTCCTGTATGCAACTTGTTCCGCCGGTCAGTTGT
GCCATTCCCGGGGTCGATTGAAACGCTGCTCCTGAACGGAGCTCCGGCGT
GGAGTTCCCGGCCGCTGTACTGAGAGCCTTAACGGCTGCTGAACGAACCG
GAGATAAAGTAAACGGTAAAAAAGTAGATCGTTTCGGCTCTGGTACCGAT
GGTGATGTCAACACCAGGCTAAAACCATAAATCAGGAATCAAGCACGTTT
GTTTTGCATAGCCAGCATCCGGTTTAGTCGAGGTTTTAAACGCAGTCGAA
GATGGGAGTTGATAGCAGCTTTTACTTTGCGCTCCGCATCCCCTATGTCT
TTGACGACAGAAGGCCCTCCCAAGTCGTGAGCACGCCGAAAAGTCATATC
CAACTCCCATGCCGGCAACGATATCTTCCTTACCGAAAATATCATAGATT
ACTCATATGTGCTGAGGCGGATGTCTTTTCTGGCTATAGCCTCAGACGCA
AGCGTTCGCCTTTAGCCTGGCACTGACAACCTCGGCAAAGTTGTAACTGG
TCATGTGTCGGGGTCAAAGACTTCCGCCTAGCCCGCCCTTCACTATCGCG
TTTTTTTTCGCTGTTTTATCCCAGCAGCCCCTCCTAATTCCGAGCGCACC
AGCAGCAACTGTTTTCAGGATCGCAGTTGACGGCACCTGAAGAATTTCAA
CAAATCTGTTATGTTTTTAGTAAAAACGTTTCCCGACAAAGAACCGATAA
CTCCTGAGCCAACTTCTGGGTTTTGTTTTGCACCGAGTTCGTAGAAACTC
TCCGGAACGTCAGCTTCCTCGACCTAGGATCATGATACGCCTCCCTTGCT
TCCGTCTGGTACACCCCAACTCCGGCAATCCGATCACGCCGTTTCTTTAA
CTCCAAGAGCAACCGCTGGCCCAATACGGCCTCCGGCCACCTAAAGGCTC
GCGCCAGCCGACTTCCTACGTTGACCGTGGTCCCCACGAGAATACATCAA
TCTGTCATTCCCGAAGTCCGCGGCGCCTTGCTTTTACGTTCAACAGTCGA
ACGGACAAATGCAGCTGTGCCGACGGTTGAAGACTGACCGCCGTCTCCAC
GCGTGACAACTTCACTAGACGCCGTGCCTTACGCAGTGCACATGAAGCTT
TTCACGAACCGTCTTCGCGGTCCAGAAGGGTGTAATTTGTTCTCCGTCCC
CTAACAGTAGTAACGCACCCGATCCTCTCCAAGCAAGAATAGTCGCGCTC
ATGCGGTAAACCTTAAGAGCTATTAGGTGAACAACTGAAAAAGTCAACAA
CTTGTTGACTTTTCCTGTGGCGTTTAATGCGTTGTTGGAACAAATTCGAA
CTTAAAAGCTCGTACGCATACATCCGTCACGCTACAGGCACGTGATAATC
GTCGCTGAACCACAATCCTTTGCCTTGTCCACGCCGCCAACCTATCTCGT
AGAGCTCCGCGAACGAGATGAAAATATCATGCATGAGCTCCCGATGCCAA
AATTCCTTTGTTTTTTGTTTTGTTCTCGCCAGCCGCCAGCGGATCTGCAA
GTAGCAACGCAAGAACGAACAGGTTCGCCGCTCGATTCCATTGAATCGAC
CACCTCAACGGCTTCCAGCACCAACGGCTCTCCCGAATACGACTCCGGAG
CCTACCAGTACCACCGTCGCAACTCCAGTACTGACGACACCATCAGTAGC
AACACTTGGAACCACCTACGGCAATTTCGGCGCCTACAAGCGCCCCCGTC
ACGAAAGGAGAACCAACATCCCTATCCAGTAGTAAGCACAGAATCCACAA
AGCCATCAGTATGTAATCCAGAACACACCATTTGTCGGTGGCAACCTGTG
AGCCCGTGAGCCCTCCAGTATCGACAGTCCAGCCAACTATGTCACAGAAC
ATGACTCTGGACCAGGCTGGCGCTCCGGCTTCAACTCCCGACCCAAGCAG
CTATCGTGAAACAAAAACTTTGGAGTCAACCAGCGCGCCGGTAGGCACTA
TCGAGCCCACCAACCTTCCGATAGAAACTCCCAAGCCCAACACCCTACCG
GCGGAAACCTTCGAGCCGACGAACTCCGGTTTTTCCACAACACAGCCAAC
AAGCCCCCCGGTGGCGACTCCGAGACCCTCCAGCCCGCCAGGATCGACTC
CCCACCCTACCGGCCCTTTGGTAGCGCACATCTGAAACAACCAGTCTCCC
GTTGAAAACCCCCCAGCCGGCGGGATATCCCCACTTTGTTCTGTATACCC
TACAAATGCCCCCGATTCGACTCCAGGGCCCACCATTCCCCCAGTAGAAA
CTCCCGAGCCAACGAACCCACTGATATAAGTCGGAGCCCACTTTCCCACA
GGTAGAGACTACGGAGCCCATCGGTTCAGCATGAATACCGGGACTTACCA
TTTCGCCTTTGGAACCCCCCGCGTCTGCGAGGCCGCCAAAAGGTCCACCG
CCAACAGTTCTATCAGATGGGGTACCCGAGCTGACGAGTTTTCCCTGTTG
CCTCGGCAGACCTCTCTACCTCCCTTTCTACAACTCCCGAGCCAACAAGC
CCGCTATCATGGTAACGACTTCAGAGCCGACCAACCCATTGATAGCGTCT
CCGGAGCGCGTAAACCTGCCGTTTGGAGTGCTCGAGCTGACAGTCCACGG
GCAGTAGCCCTGGAGCCCACCGGCCGACCGATGGAGACCTCCGAGCGTAC
TGAACCCCCAGATTCGACCCCGGGACTGACGCCCCCCCCCCGTTGCAGTC
ACGCGTTGGATCTCCAGATTCCCCCAGTTTACAGGGAGAAACAAGTGAGC
CTACCAGCCCTCCTGCAGCAACTACAGAGCCCTTCAACCCCCTAGTTGAA
ACATCGGAAACGTTGAGTCCTCCATTGGCAAGTCCGGATCTCAGCAGCCC
TCCTGTAAGAACTCCGTAGCCAAATCCCGTGACAAACACTATGGAGCCTC
TCCCCCCTTTCCTGTCGCAACGTTGGAGCCAACAAATCCTCGTGCTGTAA
CTCCCCACCCGACGAGCCATCTTACAGTGATTCCCAAATCAACATGCTTT
CTCGTCTGTATTGCAGGGCCTATCACTCCACCCCCGGCTACTGAGCCCAC
GAGTCTATCGACAGGAACTCCTCAGCCTAACACTCCCACCCGTAGCTAGT
ATGGAGCCCACAAGTCCGCCAGTGGCAACCCCAGAGCCCACCAGACCCTT
GGCAACAATCGAGCCAACAAGCCCGCCGGTAGGAGCGCCAGAGCCCACCA
ACCCCCCGAGTGTGTCCTCGGAACCATCCAACCCTGTTGTTGCAACTTGT
GCACCAACAAACCTTCTTATGGCAACTCTCGAGCGCACGAACTCACATGC
TGGGATTTATGAGCCAGCAAGCTCACGCATTCTTACTGCAGAGCCTACGA
CTCCACCCGTGGCGACTCCTAAGCCGATGAGCGCTCCGGTTGTGCCTCCC
AAGCTAACGAGCGCGCCTTCTAATACTCTTGAGATGGGAATTCCTCAGCT
AAGCATTTCATCCGTATCGACTACGGAGCCCACAACCCCCAACGGTTGGA
AGATCCGAGCCGACTAGCGCGCACGGTTCTGCCGCGGAGCTCGCGAGCCC
GCCATCGGCAACTCAAGAGCTCATTAGTCCACTAGTAGGGACGTCTAAGC
CAACCAGCGCTCTGGCAGTAACTTTAGCCGATCCTTCTCTCCGCGGAAAC
TCCAGAGCCGTCGTGCGCGCTTGTAGATCTTCCGTAGGTGACAAGCCAAC
TGGTTGAAATTTCTCAGACCATCAGCCCGCTATTGTCAACTACGCAGCAC
GCAACCTCACCGGTGGAAAATAAAGCTTATGCGCAACTTTCTTTTAGGGA
GCCCACAAGGCTGCCAATGGCAATTATATAGCCCGCGAGCCCTCCACCCG
GGACGGCTGAGCCCATCAGCCCTCTCGCAGTGACCGAGCTGATCAGTCCC
CCGGTGGAAACACCAGCTCCTACAACGCCGCCGATATAAACACTGAAGTT
TACGAAGCCCCCAAATTATTCTGCCGAACACACCGCCCCCATTGATGCGC
CCCTGTAACCGACAAACCCTCCTATATCAACGTCTGAGCCGGTAAACCCT
CTATAACGGCAACTCCCGAGGCGACAAGCCGACCTGCAGGCGATTCCTGC
ATCAAAATATCCCGCTCCTATTGTACTGAGGAGGTTGCAACTGCTCCGGT
GGCACTCCTGAGCCGATAAGTCCTCTGGTTGGGCCCTACGAGCCGACGAG
CGCGCCGGTCGATGCTCCTGGGCCGACGGGCCCCGCTTCGGGAAGTCTTC
AGCCGAACGTTACATCCGTAACGACCACGGAACCCACAACCCCACACAGT
AGAAAATCTGAAGACCCCTAAGCGCGCCCATTTTTACTACGGAGCCCCCA
AGCTCGCCAGTGGCAATTCCAAAGCCCACAAGTATTCCAGGCGGAACGGC
TGACCCTACCAGACCTCTGGTAGCATACGAGCCCACGCCTCCCACGGTTG
AAACAGCTCCAAAGGCACATATCCTCCGGCGGGGACGGTTGAGCTCTGCA
CCTCTGTGGCAGTAACCGAGCCGACCAGTCTTCCGGTGGAAACTCCAGAG
CCAGCCAGCTGGTCGATTGAAATATCACAGCCCTCCAATCCCTCCGATGC
GTCCCAGGAGGCGACGGGCCCTCTTGCAGAAATTTAGAGTCAACAAAGCC
TGCTGCGGCAATCCCCAAGCCGAGGCAACGAGCCCATCCGTTTCTATCGT
GGAGCTTACGACTTTACCCGTTGCGACTTCTGAGTGAACGAGCCCTCCGG
CAGACCCTTTCGAGCTAATTAGCCCGCCTGAAGATACCCCTATGTCGACG
AGCCCAGCGGTGGAACTAATGTCCCGTCCATTTCGCCTAGTGCGCCCGTT
TCTTCTACAGAGCCCCCGAGCCCGCACGTTGTGACTCCAGAGCCCACAAG
CCCTCCAACCGGGTCGGCAGAGCCTACCATACCTCCGCGGCAGAAAACCT
AGAGCCAATCAGCACGCCGGGAGCAGAATCGGAGTCCATCATCACCCCCC
CCAATGCATTCCCGGAGCCGACTATTATAGCCATCTCTGAACAAATTCTG
AGCTAGCGAACACTCCAGGGGGACTACCGAGCCGACGAGCCTTCCTGTGG
TAACTCTTGAGCCGGCGAGCCCAGCGGTGGGAACTTTTCAGCTCAGCACT
GCACTCGTAACGACCTCGGAGCCCCCAACCCCACAGGTATATATGTATGG
TCATCACACATAGCAGAGTATGGGTCAACCGGGTAAGGTTGCCAATCCTG
CTCGTGGCCAGCTGAACAGGGAAAATGAATTTCTCCTGTTCTCGCACGCG
CCTGAGAAATTGGTCTCGCGAGACTCCTGCTCATTATCCATACTGAAGCT
GAATCTGGTGCTTACTCACGAGATTCCTCCCGATTTCCACCTGGCTTCCG
TTTTTTTATTTCAACGGCCATACGACATCGGGCCAGTCCCGAGTTAATCG
GGTCACGCAACTGCGTATCGATGGCGTATCGGGCCAGTAGTACTCAAGGT
AGTTCCAGTAACGTCTGCTCCCATTTTGCAGGTCACTATGGACCAATTAA
CATGCGCCTCTCTTTCCCACACCCACTATTGGTATGAAGTAGGCATGTTG
AAATTATAGGTAGGAACTTCGGAGACGGCTACCGCGCCCGTTCATTTCAC
GCAGAAGCCAAGCACTCCAGGGGCAACCCAAGAGCCCACAAACCTTCGAG
CCCGGCTTCCAGCTTTCTGCTAGTAACTGAGCCGATGAGTCCCCCCGGTG
GAAACTCCTGTGCCAACCAGTTCGCCGAAAGAAACATCAGAGCCCACCAG
TCGCCCCAATGCGTCCCCGGAACCGACGGGCCCTCTTCAAACAACCTCAA
AGCCAGCAAAACCTCCTGCGCCGACCGGTGTCGACGATTTCTGAGTCAAC
GAACGCAGCATTTTCTAGTGCAAAGATTACGACTGCTAAGCCAACCAGTC
TTTCGGTTTTACCCCAAGCGGCCCGTTATGGAAGAGAGCCCTAGGTCTTG
ATCCACCCAAACGACATCAAGTCGCTGACGCAACAGCTCTTGTGCTTACT
TGTACTCCAACCTCGTCCATAAGACGTCGAGAGCTCTTCATTGTCTTTTT
TTTGTATGTTCAGTCGTATTGATAGCGTTTTCATTGGAAAAAAAACACCA
GTAACCTTGTCAAATGCCGCACAGGTCACGCAGCCTTCAGCGCCACCGGT
CGCAACGCCCACCGCGCCACCAGTGACGCCATCTACGACTGCCCCGGTAA
GTACATTTACCCCCCCCTGCGATTTTGCCTACGACGCCCCCGTTAAGCTC
GCCTGTTGTGGTCCCGACCGCGACGACTATATCCACGCCAGCTGTGCCTT
TGGCAGCAGAACGGTAGACAGAACCCCTCGCAACCCCACCGGTAACCCTA
TCTACTGCCCCACAGGTCGCGCAGCCTTCAGCACCACCGGTAGAACCGCC
CACAGCGACACCGGTGACGCCAACTACGACGCCCCCGGTAAGTACACCTT
CCTCGTGCCCTGCTATGCATTCTTTATCCAAGGCGCTTGCGATCACGGCG
GCACCCACGGCGCTACCACTTCCTTCAACTACTGCTCCGCCTGACGCGGT
GCTTTCGACGCCGCCTGTCACCATCTTACCGCCCACTGCGCCACAGGTTG
TTCTGCCTTCAGTGCCACCGCTAACACCACCCACGGCGCCACCAGAAGCA
TCACCCACATCGCCACCGGTAGCATCGCCCACATCGCCACCGGTAGCATC
GCCCACAGCGCCACCGGTAGCATCGCCCACAGCGCCACCAGTAGCATTGC
CCACAGCGCCACCGGTAGCATCGCCCACAGCGCCACCGGTGACATCGCCA
ACAACGCCACCGATAGAACTGCCCACAGAGCCACCGGTAGCAACGCCCAC
AGCACCACCGTTAGCATCGCCCACAGCGCCACCGGTAGCATCGCCCACAG
CGCCTCCGGTAGAATCGCCC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig113:579007..587426- >mRNA_A-nodosum_M_contig113.65.2 ID=mRNA_A-nodosum_M_contig113.65.2|Name=mRNA_A-nodosum_M_contig113.65.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1044bp|location=Sequence derived from alignment at A-nodosum_M_contig113:579007..587426- (Ascophyllum nodosum dioecious)
TCCACTCCGGAGCCAACTACGGCGACACCTAATCCGACATCGGCGACTCC
GGAGCCTGCGTTGTCGACGCCGGAGCCCACCTTAGCGACGTCGGAGCCCG
CCTTAGCGACGTCGGAGCCCACGACTGCGACGCCGGAGCCAACCCCGATG
ACGCCTGAGCCGACCGTGCCAACTCCCGAGCCAACCACAACCTTACCGAC
CGTGCCAACCTCTGAGCCTACAGTGGTGACTCCAGAGCCGACCTCGGCAA
CGCCCGAACCTTCTGCCATGACTCCCGAACCTAGCGCGTCGGCTTCCGTA
CCTACCGCGACTACTCCCCAGCCTGCCCTGGTGACGCCCGAGCCAACTGT
CGCACCGTCTGATACTACGCCTGATCCAACAGTCGCAACGCCTGATCCTA
CCGTCGCAACGCTTGATCCCACCGTTGAGACTCCTGAGCCGACGGCAGAG
CCTGTACCTGCGCCAACAGCTGAGCCGATCCCCCCACCCACCGATGTGCC
CGTCCAGACACCGGAGCCTACGACAGCGTCTACGCCTGAGCCTACAACCG
AGGTCACGCAGCCTTCAGCGCCACCGGTCGCAACGCCCACCGCGCCACCA
GTGACGCCATCTACGACTGCCCCGGTCGCGCAGCCTTCAGCACCACCGGT
AGAACCGCCCACAGCGACACCGGTGACGCCAACTACGACGCCCCCGGTAA
GTACACCTTCCTCGTGCCCTGTTGTTCTGCCTTCAGTGCCACCGCTAACA
CCACCCACGGCGCCACCAGAAGCATCACCCACATCGCCACCGGTAGCATC
GCCCACATCGCCACCGGTAGCATCGCCCACAGCGCCACCGGTAGCATCGC
CCACAGCGCCACCAGTAGCATTGCCCACAGCGCCACCGGTAGCATCGCCC
ACAGCGCCACCGGTGACATCGCCAACAACGCCACCGATAGAACTGCCCAC
AGAGCCACCGGTAGCAACGCCCACAGCACCACCGTTAGCATCGCCCACAG
CGCCACCGGTAGCATCGCCCACAGCGCCTCCGGTAGAATCGCCC back to top
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