mRNA_A-nodosum_M_contig1128.15.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: UPI001E8DB2BD (uncharacterized protein n=2 Tax=Morchella sect. Distantes TaxID=1051054 RepID=UPI001E8DB2BD) HSP 1 Score: 68.9 bits (167), Expect = 1.650e-10 Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 4 IDALVAAGADVNAKSAVGGQTPLHGAVICGGTP----ETIAALFRHGADDGALDETGYPPLHLASKHGKKSAIAALVAAGTDINRRASEDGMTALDWAAFLGNVDVLKMLVENGADV 342
+ AL+ +GA V+ + T LH A C G P + I L HGAD A+D G P L A K G +A L+ DINR +G TAL A+ L + ++KML+ENGADV
Sbjct: 135 VKALLNSGASVSDRDMKYSTTALHQA--CAGPPHANDKVINYLLDHGADMAAVDNNGRPVLDWAVKKGNNTATELLIKRSVDINRHNKTNGATALHTASTLHDGTIVKMLLENGADV 249
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: A0A8J9UWK9_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UWK9_BRAAE) HSP 1 Score: 68.9 bits (167), Expect = 3.410e-10 Identity = 46/126 (36.51%), Postives = 62/126 (49.21%), Query Frame = 1
Query: 13 LVAAGADVNAKSAVGGQTPLHGAVICGGTPETIAALFRHGADDGALDETGYPPLHLASKHGKKSAIAALVAAGTDINRRASEDGMTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVK 390
L+ GADVN +S+ T LH A G E L AD A D G PL A L+ G ++N R S+D + AL AA GNV+++ +LV NGAD+ G +PL +AV+
Sbjct: 2943 LINHGADVNLRSSKYNATALHDAAATGNV-EIAKVLLSKKADIDAQDINGNSPLMFAVNKNHTETAEFLINQGANVNLRGSKDKIMALHVAAATGNVEIVNVLVSNGADIDAQDINGKSPLIYAVR 3067
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: A4S1E9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S1E9_OSTLU) HSP 1 Score: 67.0 bits (162), Expect = 9.090e-10 Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 25 GADVNAKSAVGGQTPLHGAVICG--GTPETIAALFRHGADDGALDETGYPPLHLASKHGKKSAI----AALVAAGTDINRRASEDGMTA-LDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVKCKSVGAS 411
GAD NAK GG+ A CG G+ + AL HGAD + GY P+H+A++ KK I L A D N R S +T L AA + +++K+L++ GADV G+TPLH A++ + A+
Sbjct: 150 GADTNAKL-YGGKAIHFNAGSCGQRGSVPILHALLEHGADPIEETDQGYQPIHIAARGWKKYCIPYMQTLLEAEAVDPNARRSTGNLTTPLHEAAHKSSFEMVKVLIDAGADVNAQDADGETPLHKAIRGDHIHAA 284
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: A0A6H5L6J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J8_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 4.450e-9 Identity = 44/121 (36.36%), Postives = 58/121 (47.93%), Query Frame = 1
Query: 58 GQTPLHGAVI--CGGTPETIAALFRHGADDGALDETGYPPLHLASKHGKKSAIAALVAAGTDINRRASEDGMTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVKCKSVGASE 414
G TPLH C E IA L +HGA ++ G PLHLA + AL+ G + N + L A +G +DVL++L+++GADV S G T LH A K VG E
Sbjct: 279 GLTPLHSKSHEWCA---EAIATLMKHGAGGNHINADGESPLHLAVRRNDVPVATALLVGGANPNLDSQGGAFPPLYLATIMGYLDVLRVLLQHGADVNRSRTAGATLLHTAANHKDVGVVE 396
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: A9V1C4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V1C4_MONBE) HSP 1 Score: 61.6 bits (148), Expect = 3.110e-8 Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 1
Query: 4 IDALVAAGADVNAKSAVGGQTPLHGAVICGGTPETIAALFRHGADDGALDETGY------PPLHLASKHGKKSAIAALVAAGTDINRRASEDGMTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAV 387
+ AL+ GAD++ K Q+ LH A+I G T E A GAD A D PLH+A + K A+ AL+ AG ++ + +EDG+ L A G++ V+ +L+E+GAD + + G TPLH AV
Sbjct: 57 VQALLDGGADLHCKDKRQ-QSVLHLAIIYGQT-ELTAIFLAAGADVHASDVVRSLCLWQNTPLHVACRRRKVDAVRALLQAGARVDAQ-NEDGLQPLHCGAHGGDLHVVHLLLEHGADPKVADITGRTPLHLAV 187
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: A0A3N4KCJ9_9PEZI (Ankyrin (Fragment) n=2 Tax=Morchella TaxID=5193 RepID=A0A3N4KCJ9_9PEZI) HSP 1 Score: 59.3 bits (142), Expect = 5.280e-8 Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 172 LHLASKHGKKSAIAALVAAGTDIN-RRASEDGMTALDWAAFLGNVDVLKMLVENGADV 342
LH AS G+KS I L+A G I+ R EDGMTAL A LGN D++K+L+ENGAD+
Sbjct: 5 LHWASARGRKSLILKLLAQGAKIHVNRTDEDGMTALHSATLLGNWDIVKLLLENGADI 62
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: A0L850_MAGMM (Ankyrin repeat-like protein n=1 Tax=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) TaxID=156889 RepID=A0L850_MAGMM) HSP 1 Score: 61.6 bits (148), Expect = 1.020e-7 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 64 TPLHGAVICGGTPETIAALFRHGADDGALDETGYPPLHLASKHGKKSAIAALVAAGT-DINRRASEDGMTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVKCKSVGASEA 417
T L+ AVI G E + L GAD DE G PLH A+ + + + AL+ +G D++ RA E +TAL+ A G+V+++K+L+E GAD + G+TPLH A + +EA
Sbjct: 889 TALNMAVIQGHV-EMVKLLLAVGADATLADEFGNTPLHNAAINNELACAEALLGSGKGDVDARA-EHILTALNMAVIQGHVEMVKLLLEKGADATLADEDGNTPLHVAAIKNELVCAEA 1005
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: A0A7S1HEF9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEF9_HEMAN) HSP 1 Score: 57.8 bits (138), Expect = 1.080e-7 Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 109 IAALFRHGADDGALDETGYPPLHLASKHGKKSAIAALVAAGTDINRRASEDGM-TALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFA 384
+ L R GAD A D++G+ PL A G + L+ AG ++ G+ TAL WAA+ G VD +++L+E GADVR GD+ L A
Sbjct: 5 VTTLIRRGADVNAQDDSGWTPLCRAVFWGSYFSAVRLLDAGARLDLETL--GLRTALHWAAYGGQVDCVRLLLERGADVRARDGEGDSALDIA 95
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: A0A7S4EXR6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EXR6_CHRCT) HSP 1 Score: 57.4 bits (137), Expect = 1.850e-7 Identity = 43/115 (37.39%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 1 AIDALVAAGADVNAKSAVGGQTPLHGAVICGGTPE---TIAALFRHGADDGALDETGYPPLHLASKHGKKSAIAALVAAGTDINRRASEDGMTALDWAAFLGNVDVLKMLVENGA 336
A+DAL+ + + + GG TPLH +CG + A L GAD A+D G+ PLH + + AL+AAG D+N RAS G T L A DV+K+L ++GA
Sbjct: 4 AVDALLEQDSSLVNEITTGGATPLH---MCGMSRSGQLMTAHLIAKGADIEAVDTYGFRPLHRIASNNLAIGAKALIAAGADVNARAS--GATPLRVAMESRATDVIKVLQQHGA 113
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Match: UPI001C7E69B8 (uncharacterized protein n=1 Tax=Diaporthe citri TaxID=83186 RepID=UPI001C7E69B8) HSP 1 Score: 59.7 bits (143), Expect = 3.860e-7 Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 1 AIDALVAAGADVNAKSAVGGQTPLHGAVICGGTPETIAALFRHGADDGALDETGYPPLHLASK----HGKKSAIAALVAAGTDINRRASEDGMTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPL 375
A+ L+ AGA + K+ + ++PL A G E + L GAD D G PL L + H + AAL+ AG ++N TALD+A + +++K L++ GADV G TPL
Sbjct: 326 AVSELLDAGAQLECKTRLRSESPLMIACRTGANSEAVRVLLAAGADVNTNDSYGQTPLCLTAGAPGGHNRVEIAAALLDAGANVNGEQGYARATALDFACVGSHYEMVKFLIDAGADVGHHDRDGSTPL 454 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1128.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1128.15.1 >prot_A-nodosum_M_contig1128.15.1 ID=prot_A-nodosum_M_contig1128.15.1|Name=mRNA_A-nodosum_M_contig1128.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=191bp AIDALVAAGADVNAKSAVGGQTPLHGAVICGGTPETIAALFRHGADDGALback to top mRNA from alignment at A-nodosum_M_contig1128:151684..152256- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1128.15.1 ID=mRNA_A-nodosum_M_contig1128.15.1|Name=mRNA_A-nodosum_M_contig1128.15.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=573bp|location=Sequence derived from alignment at A-nodosum_M_contig1128:151684..152256- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1128:151684..152256- >mRNA_A-nodosum_M_contig1128.15.1 ID=mRNA_A-nodosum_M_contig1128.15.1|Name=mRNA_A-nodosum_M_contig1128.15.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=573bp|location=Sequence derived from alignment at A-nodosum_M_contig1128:151684..152256- (Ascophyllum nodosum dioecious)back to top |