mRNA_A-nodosum_M_contig11183.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A090RGQ2_9GAMM (S-formylglutathione hydrolase n=1 Tax=Photobacterium aphoticum TaxID=754436 RepID=A0A090RGQ2_9GAMM) HSP 1 Score: 55.5 bits (132), Expect = 2.820e-7 Identity = 32/59 (54.24%), Postives = 35/59 (59.32%), Query Frame = 2
Query: 116 SGANCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
S NCD IFL I + K VLY+LSGLTCTDENF+QKAGAQR AA
Sbjct: 24 STLNCDMRFAIFLPPHIAQG---------EKVPVLYWLSGLTCTDENFMQKAGAQRLAA 73
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A2A4YSE5_9PROT (S-formylglutathione hydrolase n=1 Tax=OCS116 cluster bacterium TaxID=2030921 RepID=A0A2A4YSE5_9PROT) HSP 1 Score: 55.5 bits (132), Expect = 6.510e-7 Identity = 30/56 (53.57%), Postives = 35/56 (62.50%), Query Frame = 2
Query: 125 NCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
NC+ + IFL + G K VLY+LSGLTCTDENF+QKAGAQR AA
Sbjct: 25 NCEMKFSIFLPPQVNDGG---------KVPVLYWLSGLTCTDENFMQKAGAQRMAA 71
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A0J1GRV1_9GAMM (S-formylglutathione hydrolase n=3 Tax=Photobacterium aphoticum TaxID=754436 RepID=A0A0J1GRV1_9GAMM) HSP 1 Score: 55.5 bits (132), Expect = 6.590e-7 Identity = 32/59 (54.24%), Postives = 35/59 (59.32%), Query Frame = 2
Query: 116 SGANCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
S NCD IFL I + K VLY+LSGLTCTDENF+QKAGAQR AA
Sbjct: 24 STLNCDMRFAIFLPPHIAQG---------EKVPVLYWLSGLTCTDENFMQKAGAQRLAA 73
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: UPI001B804C99 (S-formylglutathione hydrolase n=1 Tax=Balneatrix alpica TaxID=75684 RepID=UPI001B804C99) HSP 1 Score: 55.5 bits (132), Expect = 6.690e-7 Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 2
Query: 125 NCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
NC+ +F + L +A TLP VLY+LSGLTCTDENF+QKAGAQR AA
Sbjct: 25 NCE---MVFAIYLPPQAETETLP-------VLYWLSGLTCTDENFMQKAGAQRIAA 70
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A1D2QQY5_9GAMM (S-formylglutathione hydrolase n=1 Tax=Candidatus Endobugula sertula TaxID=62101 RepID=A0A1D2QQY5_9GAMM) HSP 1 Score: 55.1 bits (131), Expect = 9.070e-7 Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 2
Query: 125 NCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
NCD IF + L +A ++P VLY+LSGLTCTDENF+QKAGAQR AA
Sbjct: 25 NCD---MIFAIYLPPQAETQSVP-------VLYWLSGLTCTDENFMQKAGAQRVAA 70
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A2V4M1E1_PSEAC (S-formylglutathione hydrolase n=6 Tax=Pseudomonas TaxID=286 RepID=A0A2V4M1E1_PSEAC) HSP 1 Score: 55.1 bits (131), Expect = 9.240e-7 Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 2
Query: 125 NCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
NCD + ++L + G A LP VLY+LSGLTCTDENF+QKAGAQR AA
Sbjct: 27 NCDMQFAVYLPPQAEQEG-ARLP-------VLYWLSGLTCTDENFMQKAGAQRLAA 74
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A2S9AZH8_9PSED (S-formylglutathione hydrolase n=4 Tax=Pseudomonas TaxID=286 RepID=A0A2S9AZH8_9PSED) HSP 1 Score: 54.7 bits (130), Expect = 1.250e-6 Identity = 30/56 (53.57%), Postives = 35/56 (62.50%), Query Frame = 2
Query: 125 NCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
+CD ++L RAG K VLY+LSGLTCTDENF+QKAGAQR AA
Sbjct: 27 DCDMVFAVYLPPQAERAG---------KLPVLYWLSGLTCTDENFMQKAGAQRIAA 73
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A1I6IK57_9GAMM (S-formylglutathione hydrolase n=1 Tax=Marinobacter daqiaonensis TaxID=650891 RepID=A0A1I6IK57_9GAMM) HSP 1 Score: 54.7 bits (130), Expect = 1.250e-6 Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 2
Query: 128 CDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
CD E +FL + +G +P VLY+LSGLTCTD+NF+QKAGAQ+ AA
Sbjct: 26 CDMEFAVFLPPVALGSGARQVP-------VLYWLSGLTCTDQNFMQKAGAQKLAA 73
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A0D8MUZ8_PHOAN (S-formylglutathione hydrolase n=14 Tax=Photobacterium TaxID=657 RepID=A0A0D8MUZ8_PHOAN) HSP 1 Score: 54.7 bits (130), Expect = 1.260e-6 Identity = 33/56 (58.93%), Postives = 35/56 (62.50%), Query Frame = 2
Query: 125 NCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
NCD IFL T AG K VLY+LSGLTCTDENF+QKAGAQR AA
Sbjct: 27 NCDMRFAIFLPPQ-TAAG--------QKVPVLYWLSGLTCTDENFMQKAGAQRIAA 73
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Match: A0A2E6YPL6_9GAMM (S-formylglutathione hydrolase n=2 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A2E6YPL6_9GAMM) HSP 1 Score: 54.7 bits (130), Expect = 1.260e-6 Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 2
Query: 116 SGANCDGEIFIFLVQLITRAGLATLPG*CPKSAVLYYLSGLTCTDENFIQKAGAQRTAA 292
S NCD I+ V L +A ++P V+YYLSGLTCTDENF+ KAGAQR AA
Sbjct: 24 SALNCD---MIYAVYLPPQAAERSVP-------VVYYLSGLTCTDENFVTKAGAQRAAA 72 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11183.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11183.1.1 >prot_A-nodosum_M_contig11183.1.1 ID=prot_A-nodosum_M_contig11183.1.1|Name=mRNA_A-nodosum_M_contig11183.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=91bp MPHTANLSLGMENLSGLTRDGTAEPVSRDQLLWRELRRGNIHLPCSADHKback to top mRNA from alignment at A-nodosum_M_contig11183:1928..9676- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11183.1.1 ID=mRNA_A-nodosum_M_contig11183.1.1|Name=mRNA_A-nodosum_M_contig11183.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7749bp|location=Sequence derived from alignment at A-nodosum_M_contig11183:1928..9676- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11183:1928..9676- >mRNA_A-nodosum_M_contig11183.1.1 ID=mRNA_A-nodosum_M_contig11183.1.1|Name=mRNA_A-nodosum_M_contig11183.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=273bp|location=Sequence derived from alignment at A-nodosum_M_contig11183:1928..9676- (Ascophyllum nodosum dioecious)back to top |