mRNA_A-nodosum_M_contig1113.7.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1113.7.2
Unique NamemRNA_A-nodosum_M_contig1113.7.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: D8LCT6_ECTSI (Vacuolar proton pump subunit B n=3 Tax=PX clade TaxID=569578 RepID=D8LCT6_ECTSI)

HSP 1 Score: 951 bits (2458), Expect = 0.000e+0
Identity = 486/506 (96.05%), Postives = 489/506 (96.64%), Query Frame = 1
Query:    1 MANIMGPLDAHTAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRRAAAKQADASDLVTAGEKEEE 1518
            MANIMGPLDA TAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGT GIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDV DSHDDNFAIVFGAMGVNMETAR         GAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRV GRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDV+AMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLE+WYSRRAAAKQA ASDLV+   KEEE
Sbjct:    1 MANIMGPLDAATAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTHGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVFDSHDDNFAIVFGAMGVNMETAR---------GAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVTGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVMAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLEAWYSRRAAAKQAGASDLVSGDAKEEE 497          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: A0A7S2XY44_9STRA (Vacuolar proton pump subunit B n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY44_9STRA)

HSP 1 Score: 843 bits (2179), Expect = 2.260e-300
Identity = 423/484 (87.40%), Postives = 448/484 (92.56%), Query Frame = 1
Query:   37 AAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRRAAAKQADASD 1488
            A+VV+DY V PR+EYRTISGVNGPLVILENVKLP+YAEIV+LTL  G  RQGQ+LE+ G RAVVQVFEGTSGIDNR TR SFTGDVLKM ISEEMLGRAFNGSGKCIDNAPPVLAE+YLDI GQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNE AAQICRQASLVK KD  DSH+DNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRL LTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRV GRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDR LH KE+FPPINVLPSLSRLMKSAIG GMTR+DH  VSNQLYA YAQGKDVLAMKAVVGEEALSLEDHL+L FV+KFE KF++QGPYQ+R++FESL+LAWSLLR+FPKELLKKI    L+ +Y+RRA  +  D S+
Sbjct:    6 ASVVQDYSVNPRLEYRTISGVNGPLVILENVKLPRYAEIVELTLGDGTVRQGQVLEIAGKRAVVQVFEGTSGIDNRRTRTSFTGDVLKMPISEEMLGRAFNGSGKCIDNAPPVLAENYLDIQGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNETAAQICRQASLVKLKDTMDSHEDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLALTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVMGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNKEVFPPINVLPSLSRLMKSAIGVGMTRDDHDCVSNQLYASYAQGKDVLAMKAVVGEEALSLEDHLYLQFVDKFETKFIAQGPYQSRTVFESLELAWSLLRAFPKELLKKIPGNILDKYYARRAVPRAEDGSN 489          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: K3X8G8_GLOUD (Vacuolar proton pump subunit B n=39 Tax=Oomycota TaxID=4762 RepID=K3X8G8_GLOUD)

HSP 1 Score: 837 bits (2162), Expect = 8.590e-298
Identity = 415/478 (86.82%), Postives = 446/478 (93.31%), Query Frame = 1
Query:   40 AVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRRAAAKQ 1473
            AVVRDY+VEPR++YRTISGVNGPLVILENVKLPKYAEIV+LTL+ GEKRQGQ+LEV GS+AVVQVFEGT GIDNR+T   FTGDVLKMAISEEMLGRAFNGSGK ID APPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQI RQA LV++KDV DSHDDNFAIVFGAMGVNMETARFFRNDFEESG+MQ+TALF+NLANDPTIERIITP+L LTTAEYLAYERD+HVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRV GRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIY+DRQLH ++IFPPINVLPSLSRLMKSAIGEGMTR+DH  VSNQLYA YA GKDV AMKAVVGEEALSLEDHL+L F + FE KF++QGPYQ+R IFESLDLAWSL RSFPKELLKKI KK L+ +Y+RR  A+Q
Sbjct:   14 AVVRDYYVEPRIDYRTISGVNGPLVILENVKLPKYAEIVNLTLANGEKRQGQVLEVQGSKAVVQVFEGTDGIDNRHTHCEFTGDVLKMAISEEMLGRAFNGSGKAIDGAPPVIAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQIVRQAGLVQRKDVMDSHDDNFAIVFGAMGVNMETARFFRNDFEESGSMQKTALFMNLANDPTIERIITPKLALTTAEYLAYERDMHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVTGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIFPPINVLPSLSRLMKSAIGEGMTRDDHSAVSNQLYASYATGKDVQAMKAVVGEEALSLEDHLYLKFADNFEGKFIAQGPYQSRDIFESLDLAWSLFRSFPKELLKKIPKKHLDMYYARRTQARQ 491          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: W4FRS5_9STRA (Vacuolar proton pump subunit B n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FRS5_9STRA)

HSP 1 Score: 832 bits (2150), Expect = 1.120e-295
Identity = 412/483 (85.30%), Postives = 446/483 (92.34%), Query Frame = 1
Query:   25 DAHTAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRRAAAKQ 1473
            + +  AVVRDY+VEPR++YRTISGVNGPLVILENVKLPK+AEIV+LTLSTGE RQGQ+LEV GS+AVVQVFEGT GIDNR+T   FTGDVLKM ISEEMLGRAFNGSGK ID  PPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQICRQA LV++KDV DSH DNFAIVFGAMGVNMETARFFRNDFEESG MQ TALF+NLANDPTIERIITPRL LTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRV GRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIY+DRQLH ++IFPPINVLPSLSRLMKSAIG+GMTR+DH  VSNQLYA YA GKDV AMKAVVGEEALS+EDHL+L F +KFEAKF++QGPYQ+R IFESLDLAWSL R+FPKELLKKI KK L+++Y+RR   ++
Sbjct:   18 EVNAKAVVRDYYVEPRIDYRTISGVNGPLVILENVKLPKFAEIVNLTLSTGEVRQGQVLEVQGSKAVVQVFEGTDGIDNRHTHCEFTGDVLKMPISEEMLGRAFNGSGKAIDGGPPVVAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVQRKDVMDSHQDNFAIVFGAMGVNMETARFFRNDFEESGCMQNTALFMNLANDPTIERIITPRLALTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVMGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIFPPINVLPSLSRLMKSAIGDGMTRDDHSAVSNQLYASYATGKDVQAMKAVVGEEALSMEDHLYLKFTDKFEAKFIAQGPYQSRDIFESLDLAWSLFRAFPKELLKKIPKKHLDTFYARRTQVRE 500          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: B8C0L1_THAPS (Vacuolar proton pump subunit B n=21 Tax=Bacillariophyta TaxID=2836 RepID=B8C0L1_THAPS)

HSP 1 Score: 827 bits (2137), Expect = 8.060e-294
Identity = 417/478 (87.24%), Postives = 445/478 (93.10%), Query Frame = 1
Query:   40 AVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRRAAAKQ 1473
            +VV+DY V PR+EYRTI+GVNGPLVIL+NVKLPKYAEIV+LTL  G  R GQ+LEV GSRAVVQVFEGTS IDNR TR  FTGDVLKM +SEEMLGR+FNGSGK IDNAP VL E YLDI GQPINPS RDYPKAMIQTGISAIDVMNSVARGQKIP+FSAAGLPHNEVAAQI RQASLVK KD  DSH++NFAIVFGAMGVNMETARFFR+DFEESGAMQRTALFLNLANDPTIERIITPRL LTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRV GRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTK IFPPINVLPSLSRLMKSAIGEGMTR+DH +VSNQLYA YA GKDVLAMKAVVGEEALS+EDHL+L+F+E+FE+KFVSQGPYQAR+IFESLDLAWS+LR+FPKELLKKI KK L+ +Y+RRA AK+
Sbjct:   20 SVVKDYSVVPRLEYRTIAGVNGPLVILDNVKLPKYAEIVNLTLGDGTTRSGQVLEVSGSRAVVQVFEGTSDIDNRKTRCEFTGDVLKMGVSEEMLGRSFNGSGKVIDNAPKVLPEAYLDINGQPINPSARDYPKAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDTTDSHEENFAIVFGAMGVNMETARFFRSDFEESGAMQRTALFLNLANDPTIERIITPRLALTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVVGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKGIFPPINVLPSLSRLMKSAIGEGMTRDDHGSVSNQLYASYAMGKDVLAMKAVVGEEALSMEDHLYLSFLERFESKFVSQGPYQARTIFESLDLAWSILRAFPKELLKKIPKKTLDQYYARRATAKE 497          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: F0Y5A7_AURAN (Vacuolar proton pump subunit B n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y5A7_AURAN)

HSP 1 Score: 809 bits (2089), Expect = 7.020e-287
Identity = 404/470 (85.96%), Postives = 433/470 (92.13%), Query Frame = 1
Query:   55 YHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRRAA 1464
            Y V+PR++YRTI GVNGPLVILENVK+PK+AEIV LTL +GEKR GQ+LEV GSRAVVQVFEGTS IDNR+T   FTGDVLKM ISEEMLGR+FNGSGK IDNAP VLAEDYLDI G PINPSCRDYPKAMIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNEVAAQI RQASLV+ KD  D H++NFA+ FGAMGVNMETARFFRNDFEESGAMQRT LFLNLANDPTIERIITPRL LTTAEYLAYE+DLHVL ILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRV+GRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQ+H KEIFPPINVLPSLSRLMKSAIGEGMTR+DH  VSNQLYA YA G+DVLAMKAVVGEEALSL+DHL+L F+++FE KFV+QGPYQ R+IFESLDLAWSLLR+FPKELLKKI KK L   Y+R+AA
Sbjct:    4 YSVQPRLDYRTIEGVNGPLVILENVKMPKFAEIVHLTLGSGEKRSGQVLEVSGSRAVVQVFEGTSDIDNRHTHCEFTGDVLKMPISEEMLGRSFNGSGKVIDNAPAVLAEDYLDINGTPINPSCRDYPKAMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEVAAQIARQASLVQLKDTMDGHEENFALCFGAMGVNMETARFFRNDFEESGAMQRTVLFLNLANDPTIERIITPRLALTTAEYLAYEKDLHVLTILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVDGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQMHNKEIFPPINVLPSLSRLMKSAIGEGMTRDDHGAVSNQLYASYAMGRDVLAMKAVVGEEALSLDDHLYLAFLDRFEGKFVAQGPYQNRTIFESLDLAWSLLRAFPKELLKKIPKKTLAEHYARKAA 473          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: A0A2D4CAE7_PYTIN (Vacuolar proton pump subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAE7_PYTIN)

HSP 1 Score: 793 bits (2047), Expect = 4.500e-280
Identity = 391/453 (86.31%), Postives = 421/453 (92.94%), Query Frame = 1
Query:   16 GPLDAHTAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDL 1374
            G    +  AVVRDY+VEPR++YRTISGVNGPLVILENVKLPKYAEIV++TL+TGEKRQGQ+LEV G++AVVQVFEGT GIDNRNT   FTGDVLKMAISEEMLGR FNGSGK ID APPV+AEDYLDI GQPINPSCRDYPK MIQTGISAIDVMNS+ARGQKIPLFSAAGLPHNE+AAQICRQA LVK+KDV DSH+DNFAIVFGAMGVNMETARFFRNDFEESG+MQ+TALF+NLANDPTIERIITPRL LTTAEYLAYER++HVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRV+GRNGSITQ PILTMPNDDITHPIPDLTGYITEGQIY+DRQLH ++IFPPINVLPSLSRLMKSAIGEGMTR+DH  VSNQLYA YA GKDV AMKAVVGEEALSLEDHL+L F EKFE KF++QGPYQ+R I+ES  L
Sbjct:    3 GARRVNAQAVVRDYYVEPRLDYRTISGVNGPLVILENVKLPKYAEIVNITLATGEKRQGQVLEVQGTKAVVQVFEGTDGIDNRNTHCEFTGDVLKMAISEEMLGRTFNGSGKAIDGAPPVVAEDYLDIQGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRKDVMDSHEDNFAIVFGAMGVNMETARFFRNDFEESGSMQKTALFMNLANDPTIERIITPRLALTTAEYLAYEREMHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVSGRNGSITQFPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIFPPINVLPSLSRLMKSAIGEGMTRDDHSAVSNQLYASYATGKDVQAMKAVVGEEALSLEDHLYLKFTEKFENKFIAQGPYQSRDIYESRGL 455          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: A0A7R9UDM1_9STRA (Vacuolar proton pump subunit B n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UDM1_9STRA)

HSP 1 Score: 790 bits (2039), Expect = 3.900e-279
Identity = 388/477 (81.34%), Postives = 432/477 (90.57%), Query Frame = 1
Query:   28 AHTAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRR 1458
            A  +A  RD+HV+PR++Y+TI GVNGPLVIL+NVKLPKYAEIV+LTL TGE R GQILEV G +AVVQVFEGTS +DNR T +SFTGDVL+M ISEEMLGR FNGSGKCID APPV+AEDYLDI GQPINPSCRDYPKAMIQTGISAIDVMN++ARGQKIP+FSA+GLPH+EVAAQI RQASLVKQKDV DSH+DNFAIVFGAMGVNMETAR+F+NDFEESGAMQRTALFLNLANDPTIERIITPRL LTTAEYLAYER++HVLVILTDM++YADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGR+ G+NGSITQLPILTMPN DITHPIPDLTGYITEGQIYLD QLH K++FPPINVLPSLSRLMKSAIG GMTR+DH+ VS QLYA YA GKDV+AMKAVVGEEALS +D L+L F+E+FE  FV+QG Y+ R IFESLD AW +LR FP +LLKKI++K  + +Y RR
Sbjct:    5 AELSAATRDFHVQPRLDYKTIRGVNGPLVILDNVKLPKYAEIVNLTLGTGETRSGQILEVAGDKAVVQVFEGTSDVDNRKTHISFTGDVLRMPISEEMLGRQFNGSGKCIDRAPPVVAEDYLDIQGQPINPSCRDYPKAMIQTGISAIDVMNTIARGQKIPIFSASGLPHSEVAAQIARQASLVKQKDVMDSHEDNFAIVFGAMGVNMETARYFKNDFEESGAMQRTALFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLVILTDMTAYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNGDITHPIPDLTGYITEGQIYLDTQLHNKDVFPPINVLPSLSRLMKSAIGVGMTRDDHYPVSMQLYANYAMGKDVMAMKAVVGEEALSSDDILYLEFLERFETTFVNQGAYENRDIFESLDKAWEMLRRFPPDLLKKISQKLKDKYYDRR 481          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: W7TUD0_9STRA (Vacuolar h+ atpase b subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUD0_9STRA)

HSP 1 Score: 792 bits (2046), Expect = 5.050e-279
Identity = 395/488 (80.94%), Postives = 435/488 (89.14%), Query Frame = 1
Query:    4 ANIMGPLDAHTAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRRAAA 1467
            ++ M PL   T  VV+ Y + PR++Y TI GVNGPLVIL+NVKLPK+AEIV+LTL  GEKRQGQ+LEV G +AVVQVFEGTSGIDNR+T   FTGDVL+ A+SEE+LGR+FNGSGK ID APPVL E YLDI GQPINPSCRDYP+AMIQTGISAIDVMNSVARGQKIP+FSAAGLPHNEVAAQI RQASLVK KD  DSHDDNF +VFGAMGVNMETARFFR  FEESGAMQR+ LFLNLANDPTIERIITPRL LTTAEYLAYER++HVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGR+ G+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDR LH +EIFPPINVLPSLSRLMKSAIGEGMTR DH +VSNQLYA YA GKDV AMKAVVGEEALSLEDHL+L FV+KFE K+++QG    R++FESLDLAWSLLR FP++LLKKITK +L ++Y+RR AA
Sbjct:   70 SSTMAPLS--TGDVVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAA 555          
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Match: A0A7S0XC67_9STRA (Vacuolar proton pump subunit B n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XC67_9STRA)

HSP 1 Score: 774 bits (1999), Expect = 5.250e-273
Identity = 386/475 (81.26%), Postives = 421/475 (88.63%), Query Frame = 1
Query:   31 HTAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAEIVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLKMAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHDSHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIERIITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQLYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQARSIFESLDLAWSLLRSFPKELLKKITKKQLESWYSR 1455
            + +A VR+Y +EPR+EY+TI+GV GPLVILENVK P+YAEIV++TL  GE R GQ+LEV G++AVVQ+FEGTSGIDN  T+  F GDVLKM ISEEMLGR FNGSG+ ID APPVLAEDYLDIMG PINPS RDYP AMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQI RQ+SLV+ KD  D H DNF +VFGAMGVNMETARFFRNDFEESG M+RT LFLNLANDPTIERIITPRL L TAEYLAYERDLHVL ILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGR+NGRNGSITQ PILTMPNDDITHPIPDLTGYITEGQIYLDR+L +KEIFPPINVLPSLSRLMKSAIG+G+TREDH  VSNQLY+ YA+GKDV+AMKAVVGEEALS EDHL++ FVEKFE+KF+SQG YQ R+IFESLDLAW L R FP+ LL KI  K  E +Y R
Sbjct:   10 NASAAVRNYQLEPRLEYKTIAGVQGPLVILENVKTPRYAEIVNVTLGDGETRVGQVLEVAGNKAVVQIFEGTSGIDNTKTKCKFIGDVLKMPISEEMLGRTFNGSGRQIDGAPPVLAEDYLDIMGMPINPSSRDYPTAMIQTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQIVRQSSLVQLKDTMDGHSDNFCVVFGAMGVNMETARFFRNDFEESGVMERTCLFLNLANDPTIERIITPRLALCTAEYLAYERDLHVLCILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRINGRNGSITQFPILTMPNDDITHPIPDLTGYITEGQIYLDRKLDSKEIFPPINVLPSLSRLMKSAIGKGLTREDHGAVSNQLYSSYARGKDVMAMKAVVGEEALSPEDHLYIKFVEKFESKFISQGGYQNRTIFESLDLAWELCRIFPQNLLGKIDPKMREKYYPR 484          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1113.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCT6_ECTSI0.000e+096.05Vacuolar proton pump subunit B n=3 Tax=PX clade Ta... [more]
A0A7S2XY44_9STRA2.260e-30087.40Vacuolar proton pump subunit B n=1 Tax=Fibrocapsa ... [more]
K3X8G8_GLOUD8.590e-29886.82Vacuolar proton pump subunit B n=39 Tax=Oomycota T... [more]
W4FRS5_9STRA1.120e-29585.30Vacuolar proton pump subunit B n=9 Tax=Aphanomyces... [more]
B8C0L1_THAPS8.060e-29487.24Vacuolar proton pump subunit B n=21 Tax=Bacillario... [more]
F0Y5A7_AURAN7.020e-28785.96Vacuolar proton pump subunit B n=2 Tax=Pelagomonad... [more]
A0A2D4CAE7_PYTIN4.500e-28086.31Vacuolar proton pump subunit B n=1 Tax=Pythium ins... [more]
A0A7R9UDM1_9STRA3.900e-27981.34Vacuolar proton pump subunit B n=2 Tax=Pinguiochry... [more]
W7TUD0_9STRA5.050e-27980.94Vacuolar h+ atpase b subunit n=2 Tax=Monodopsidace... [more]
A0A7S0XC67_9STRA5.250e-27381.26Vacuolar proton pump subunit B n=1 Tax=Chromulina ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1113contigA-nodosum_M_contig1113:133272..148517 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LCT6
Preferred nameATP6V1B1
PFAMsATP-synt_ab,ATP-synt_ab_N
Model size2632
Max annot lvl2759|Eukaryota
KEGG koko:K02147
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0000221,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000331,GO:0001503,GO:0001666,GO:0001678,GO:0001726,GO:0003008,GO:0003674,GO:0003779,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005886,GO:0005902,GO:0005903,GO:0005911,GO:0006355,GO:0006357,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006874,GO:0006875,GO:0006885,GO:0006914,GO:0006950,GO:0006996,GO:0007010,GO:0007015,GO:0007035,GO:0007154,GO:0007155,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007423,GO:0007588,GO:0007600,GO:0007605,GO:0008064,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008286,GO:0008324,GO:0009056,GO:0009268,GO:0009405,GO:0009506,GO:0009507,GO:0009536,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009757,GO:0009790,GO:0009887,GO:0009889,GO:0009894,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010038,GO:0010182,GO:0010243,GO:0010255,GO:0010468,GO:0010494,GO:0010506,GO:0010556,GO:0010639,GO:0010941,GO:0010942,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015682,GO:0015833,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016241,GO:0016323,GO:0016324,GO:0016328,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019725,GO:0019829,GO:0022603,GO:0022607,GO:0022610,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030029,GO:0030036,GO:0030054,GO:0030139,GO:0030641,GO:0030659,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030837,GO:0031090,GO:0031164,GO:0031224,GO:0031252,GO:0031323,GO:0031326,GO:0031329,GO:0031333,GO:0031410,GO:0031982,GO:0032271,GO:0032272,GO:0032501,GO:0032502,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033176,GO:0033178,GO:0033180,GO:0033181,GO:0033500,GO:0033572,GO:0034220,GO:0034284,GO:0034622,GO:0035770,GO:0036176,GO:0036293,GO:0036442,GO:0036464,GO:0042221,GO:0042470,GO:0042471,GO:0042472,GO:0042592,GO:0042593,GO:0042623,GO:0042625,GO:0042626,GO:0042886,GO:0042995,GO:0043067,GO:0043068,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043242,GO:0043244,GO:0043248,GO:0043254,GO:0043434,GO:0043492,GO:0043583,GO:0043933,GO:0044085,GO:0044087,GO:0044232,GO:0044237,GO:0044248,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044769,GO:0044877,GO:0045177,GO:0045184,GO:0045335,GO:0045851,GO:0046686,GO:0046961,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048568,GO:0048598,GO:0048731,GO:0048770,GO:0048839,GO:0048856,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050877,GO:0050896,GO:0050954,GO:0051015,GO:0051017,GO:0051128,GO:0051129,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051452,GO:0051453,GO:0051493,GO:0051494,GO:0051693,GO:0051704,GO:0051716,GO:0055044,GO:0055065,GO:0055067,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060142,GO:0060255,GO:0061572,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070482,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072503,GO:0072507,GO:0072512,GO:0080090,GO:0090066,GO:0090596,GO:0090662,GO:0097435,GO:0097708,GO:0098588,GO:0098590,GO:0098609,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098858,GO:0098862,GO:0099131,GO:0099132,GO:0110053,GO:0120025,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901879,GO:1901880,GO:1902600,GO:1902903,GO:1902904,GO:1902906,GO:1903506,GO:1990816,GO:1990904,GO:2000112,GO:2001141
Exons10
Evalue0.0
EggNOG OGsCOG1156@1|root,KOG1351@2759|Eukaryota
Ec32 ortholog descriptionvacuolar ATP synthase subunit B
Ec32 orthologEc-07_006840.1
DescriptionATP hydrolysis coupled proton transport
Cds size1521
COG categoryC
BRITEko00000,ko00001,ko00002,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1113.7.2prot_A-nodosum_M_contig1113.7.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1113 134383..148517 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866507.770381-UTR-A-nodosum_M_contig1113:133271..1343821680866507.770381-UTR-A-nodosum_M_contig1113:133271..134382Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1113 133272..134382 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866507.7844563-CDS-A-nodosum_M_contig1113:134382..1345591680866507.7844563-CDS-A-nodosum_M_contig1113:134382..134559Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 134383..134559 -
1680866508.4618642-CDS-A-nodosum_M_contig1113:135343..1354661680866508.4618642-CDS-A-nodosum_M_contig1113:135343..135466Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 135344..135466 -
1680866508.4824736-CDS-A-nodosum_M_contig1113:136254..1364101680866508.4824736-CDS-A-nodosum_M_contig1113:136254..136410Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 136255..136410 -
1680866508.4916568-CDS-A-nodosum_M_contig1113:138153..1383541680866508.4916568-CDS-A-nodosum_M_contig1113:138153..138354Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 138154..138354 -
1680866508.5016832-CDS-A-nodosum_M_contig1113:139671..1398731680866508.5016832-CDS-A-nodosum_M_contig1113:139671..139873Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 139672..139873 -
1680866508.5124552-CDS-A-nodosum_M_contig1113:140526..1406211680866508.5124552-CDS-A-nodosum_M_contig1113:140526..140621Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 140527..140621 -
1680866508.523115-CDS-A-nodosum_M_contig1113:141299..1414251680866508.523115-CDS-A-nodosum_M_contig1113:141299..141425Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 141300..141425 -
1680866508.53391-CDS-A-nodosum_M_contig1113:142042..1421521680866508.53391-CDS-A-nodosum_M_contig1113:142042..142152Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 142043..142152 -
1680866508.5449946-CDS-A-nodosum_M_contig1113:143062..1431981680866508.5449946-CDS-A-nodosum_M_contig1113:143062..143198Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 143063..143198 -
1680866508.5529072-CDS-A-nodosum_M_contig1113:148322..1485171680866508.5529072-CDS-A-nodosum_M_contig1113:148322..148517Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1113 148323..148517 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1113.7.2

>prot_A-nodosum_M_contig1113.7.2 ID=prot_A-nodosum_M_contig1113.7.2|Name=mRNA_A-nodosum_M_contig1113.7.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=507bp
MANIMGPLDAHTAAVVRDYHVEPRMEYRTISGVNGPLVILENVKLPKYAE
IVDLTLSTGEKRQGQILEVFGSRAVVQVFEGTSGIDNRNTRVSFTGDVLK
MAISEEMLGRAFNGSGKCIDNAPPVLAEDYLDIMGQPINPSCRDYPKAMI
QTGISAIDVMNSVARGQKIPLFSAAGLPHNEVAAQICRQASLVKQKDVHD
SHDDNFAIVFGAMGVNMETARFFRNDFEESGAMQRTALFLNLANDPTIER
IITPRLTLTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRR
GYPGYMYTDLSTIYERAGRVNGRNGSITQLPILTMPNDDITHPIPDLTGY
ITEGQIYLDRQLHTKEIFPPINVLPSLSRLMKSAIGEGMTREDHWNVSNQ
LYAMYAQGKDVLAMKAVVGEEALSLEDHLFLNFVEKFEAKFVSQGPYQAR
SIFESLDLAWSLLRSFPKELLKKITKKQLESWYSRRAAAKQADASDLVTA
GEKEEE*
back to top

mRNA from alignment at A-nodosum_M_contig1113:133272..148517-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1113.7.2 ID=mRNA_A-nodosum_M_contig1113.7.2|Name=mRNA_A-nodosum_M_contig1113.7.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=15246bp|location=Sequence derived from alignment at A-nodosum_M_contig1113:133272..148517- (Ascophyllum nodosum dioecious)
ATGGCGAACATCATGGGGCCCCTCGACGCGCACACCGCGGCGGTCGTACG CGATTACCACGTCGAGCCTAGAATGGAGTACAGGACGATCTCGGGTGTTA ACGGTCCGCTGGTTATCCTGGAGAACGTGAAGCTGCCCAAGTACGCCGAG ATCGTCGATCTGACGCTCTCGACGGGGGAGAAGCGCCAGGGACAGGTAAA CTTGGGAAGCGCAATCTACTTCGAGAGTGGGAGTCGTTTTTGTCTATCGT ACTTCCAGCCCAGGCCGCCGCCTACGCGTGACCCTTTTTGTTCCGCCGGT TCTCTTACAGCCCCACCGCTGCATGGGCACGGTCTTGCCCTGACGATGTA CATCAGATAATTTGCCCTTCCGTCTCCGGTGCAGAGAAACCTCACAGGCC CTGCCTCGCCGAGTTTAGTGTTGCCTTGCAGAGAGGCGCGAGGCTGATCA ATTCCAGAGAAATGCGTACATGTAGAGAGCTCTACGTACATCCAACCTCT CGAAACAGAACGGAACCTCACGAACGTGCACTTGTTGCCGCATCTCTGAA GCGCTCATATTTTGTTCCTTCCATCCGACCTTGCTTATTAGTAGTACAGT GAGTGACCCTGCGGTAGAGAGCCGGGCTCTCGCAATCGCTTCGCTGTAGG TTGGCTTCCCGATCGACATGATGTTCAAGAGAAGCAATGTTTTGGCGCAT ATGCGCGCCCTCGTTCTTTGGGTTGACGCTCTCCAGGAGTTTAGTCTATA GATAAGATGCAAAACCCGGATTCCTTTCGTATACTTGTACGTACCCGGTA GCTTCGACTTCGACTTCTACTTCGTATTCTTTTTGTACTACTGTTGTGTA GCGTGAGTCAACTTCCACGATCACCTGTCATTCCAAATACATCTTCGCTG TATTTTCGATTACCCACCGTCAGCGGGTGGTCTACCAGTACAAGTATCCT TAACCAAGTACTCTGCGATCGATGTCTTCTGAGGAGTGCCAGCGCAAGGT TGCCGCATGCTTTCTCGCGCCCTCAATACGTACCTCTGAACACGTATGGC CACAGAGCAGAACGTAGCCAAAGTACTTGCCGCTCCACAACACAAAATGA GCATGCCTCAAAGTCTCGTTCCTTCCTATTTAAATGACACCGCGCCACAA CTGTTTGTCCCTTCCTGGCGACGATGTCTTTGGCTGGCTACTTTATTGCC CGTTTCATTCTCTCTGCTTTCCCTGCCTTTTTTTTTCTCTTGTCACCGTG TTCCCGGTTGGATTTGGTTTGGTTCCGTCAATTTTATGACCACGGCTGGA TTTCGTAGCGGAGGATTACTTAAATGTGAGATAAACTCCAAATAAACAAC AATTTTGTCCTTGCAGCCTATGATATGATCCCACTTTCTTACTGTGAGCT GGCCAGACGACTTGCACGCGCACGGAATGAATCTTGTAATACCGAAGCGT GCGTCTAGAGGAATCAAAGCCGCCGGATCAAGCGTGCCGCCCTTCATTGT AACTATCACTAAAACGTGCCTTTTATGTGTACAATAGACACTTGCGCTCT CCTCACCCCAATCCCACCCCACCACGAGAAAGGTCAAAGGTTGGTTATGC TACAAGTACTTGGCAATGCACTATTATAGCTGGTACACGCCGACATCGCC TGCTGTCTTCAGAGCACACGGCCGTAGTCCAATCCCACCACCACGAGAAA GGTCAAAGTTGGTTGTAGCTGGCACTTGCTGGTACACGCCGACATCGCCT GCTGTCTTCAGAGCACACGGCCGTAGTCCAATCCCACCACCACGAGAAAG GTCAAAGGTTGGTTGTGCTACAAGTACTTGTCAATGCACTTGCTGGTACA CCCCGACATCGCCTGCTGTCTTCAGAGCACACGGCCGTACTCCAATCCCA TCACCACGAGAAAGGTCAAAGGTTGGTTGTGCTACAAGTACTTGGCAATG CACTAGCTGGTACACCCCGACATCGCCTGCTGTCTTCAGAGCACACGGCC GTAGTTGTTGTGCGGCTTGATACGCTGCAGTACAATACTCTGCTGTAAAG CGCCACCGGGTGTGCATTCATGTCATACCTTATTATACTGTATTATTGAG TAGGTTCCCTTTTGCCCCAAATCGTCTGGTTTCTGTTTTTTCGTCTTTGC GGTTGGAGCCATTCACCATGCCGCCCCTTGAGGTTCGAGGACTGAAAGGG TATCTATTTAATACTGTATCATCTATACTACTACCGTATATTTTTGTCTT CCTCTCCCTCTCTGTTGCGGGTGTTAATTATTAATAGGCGTGGGCGAAGC ACTTGTATGATAGTCTACAGTGTTACTAATAGTACCTGTCTCGTGTTATC ATACATGTTATCTACTGTTGCGGGGAGGCGTGGGCGAAGCACTTCTATTA TACAGTAGTACCTGTCTCATGTTACATGCTACAGTATACGTGATCAGCGA TTGGTTGATTCTCTCTTCTTCCTTATGTTTCCACACGGACAAAAATACGT CCTATTACTATACACTATTACAGTAATAGTCTATCAATAGTGATTTTTTT AGTTACGTATCTCTCATCACAAGTAGGACACATTACTGCTATTAATACTC TATTAGAGTACCTCTAATGTAATGTAATAATCATGTCAGCTGTACAGTAG TACTACAGTTAGTTTAAGAAAAAAAGAAATTGTCTGAAACAGACTCGTGC GTCATCGCGAACCAAGTCTTCACTGTATCTGAACGTATCTAGACCCTCCG AGCTGTTGTCGTAGCCGTTTTTTTCTCGGATTTATTTTGCTTCGCGATTC AAGTACATACTCGGTTTCTTTCTGCACAAAAAGCAGCAGTTCTTTTCCTA TAAGTAGAGTACTATTAATATCGATTGTTTTCCCAGAAGGGCCTTGTGTG TGTGTTGTGTGTGTTTTCTTCCCATTCATTCTGGACTTCAATGGACGTAC CAGCCGGGGTCACACAGGAAGAAGGTAACACAGGATTTTCCATCCACCTT CTTTCTGCGGTGCTTGCCTTAATTTTTCTCGCGAGAAGGATTCAGCCATT CCTTTCCCTCGTCGACCGTGAAGTCGAATTTTGTGTACTAACGATTTAAT CGTTCTCCACCCGTTGGGCATTTTTATATTCATTTTTTAGTTTTTCAGTG AGAAAAATCCCGTTTGCCGGGATCGAACTCACGTCCCAACGTGTCAGAGG TTACATGGTACCTCTGAGCTACCGGGGCGACCGAAGGGCCTTGTAGACAT TTTTTTTTCTAGGTGCTCTCTTGTACAGTATATACAGTACCAATAATCTC GTACTCAGATTTGGATGATATATCATGGAGGAGAGGATTCAGGTTTACTA GACTAATACAGTATATAATTAATATATCTGTATCACCAATGTTAGCATAA TCCTCGGTATGTCATACAACTACAAGTACAAGTGCCGCATTTACATAGCA GTACACAGTTTTGGTAGTATACTTGTAGTAGTATCTCCATCCCCGCTACA GCAGTAGGCTCTAGTCTTCAACACACTACCGTATACCTACACTATCAATA TAATCCGTACGGTTAGCAGCTTCCCCTCTCATGGTACTATAATATTAATA TAATATAATACTATTAATAGTAGTATCTTTGAAGAGTAGAGTGTTTGTAC GTGACGTCTGTACGAAAGGATGTGACCCCCAAGACAAGCTCCGACGGCCA GCAGCGAAGTAAGAGCTACTTCAAAAGTAGTCAGGGCGAAGCACATGTGA TTTTATGGATAGTGTCGTTTAACTTCATCTCTCCAAAATTCGTTCTTGCC GCACGAATCTCTTTTTAATACCTGGCACCTGGTACCAGATAAAATAGTAG TTTGCACCGTGGCTGGAAATGTCCTGATTAATTCTATGAATACTATTATT AGACAATCAGACAAATATTACATACAGTAATAACATGAATCCAAGACGAC ACGTAACGCTTTCGCTACAGGTATCACACGTTGACTGGAAATCTCTACTG CAGCGCTTTATACTGTATTGGTGGTCCTTGTAGCGTGAGAGTCTTGGCGT TTCACTCCTTTATTGTACCCTATACTCACACTATAATACTAATACTGGTA CTATCAATATGTAGCGTATGTCTTTCGTTTTTATATATAATTACTACCAG GTACGTATTATTAATATTATATTTTAAATTTCGAACAAAAGATCTCCCGT ACCCCACGAAAAAACTCCAGTCCTAAAACCTGAAAAGAAAAGCCACGGTA CTATACTACCTGGTATATAGGTATTTAGGTATTTATAGTACAAGTACTAA ACGTTGGACGTTATACTTCGCTTTGAGGAATCGATACTCTTGTACTTCAA CGATATTCTGTAAGCTTGAACTACTGACGCATCAGAGTAACGATCTGTAA AAATATTATCTCGTACGAGTTTGAGTACTGTATTCAAATCATTTTTTGGG GGGGGGGTGCAGCACTTCCTTACTGCAAAAGATAAACGTGTATGTTGGTA TGTTTGTATCTATATATGTCAGTATAGTCATCGCTTTCAGGAGACTATTA ATAGGGCATGGACCGGGCAGTGTCAGCGGAACAGGGGAATACGAATTATT TGTAGTATTAATATTAGTATGTGCTGGAGTTGTCATTTATCATTTATCAT TTATTAAAAAGTACTTTTGTCTGTCGGTACATGAGTGACACGAACCTTAC TTGGACTGCTGTACTACTGTACCGTACACGCTGCCCTCCGTTGGTTGAAC TATCACTATGATATCACTAGAATACAGTAAGAGATATTATACAGATTTAG CAACATAACGATTTCCAACACCAAACCACCGCCCGAACAAGAGTTTGTAC TGTACTTTTTTATGTTGTTTCAACACATTCAGCGTATTGGGGTTGCCAAA CCGAAAATCCCTGTTACAGTAGTATTACTGACAGTCTGCTGAGTAGTATT ATTAGGGAAAAGAGAACAAAAAGGGAAAGTCTGGCAGTACACCCCCCCCC CCCCCTACGATGCTTGTCAAGAGGAAAACAAAACAAATCAAAACGAAATA CAAGGCGCGTACAACACAAAGATAAACAAAACAGATGATCTGAGAGACAG CACGTGGCGTATCCACATGCCTATAAATAGGCGGCTACGCGGGTCTCGGT CCGTCGTACAGGATTCCTCTGGCTTGTCAACTAGGCCAATCGCTGTCACT TCGGCGGTCATACACGCTTACCTGTCTGTACTGAAGGACTAGTTTATTGG CTAAGGGAAGGAAATCCCGTTCCGCCCTTGACGCGACTAATGTAAGGTTC TAATTCTTCTGCACGACAGATTCTGGAGGTTTTCGGCAGCCGCGCCGTCG TCCAGGTATTCGAGGGCACCTCGGGCATCGACAACAGGAACACGAGGGTA TCCTTCACGGGCGACGTGCTCAAGATGGCCATCTCCGAGGAGATGCTTGG GAGGGGTGCGTTCGATTCATCTTTTTGTTTAGTACTGAATGCAGCATTCA TGCTGTTTTGAGTATCTCACTTTCTTCTCCCGATGGGATGCGAGTTGAGC GCTCTTGAATATTGAATATTGAATGCACACCTATTGGAGATCTGGTAAAA TATTTGTAATGTAACATTATGGAAGCATAATAGCAGACATGAAGCAATTC GTCAGGACGAGCAGTTGGCGGGTGTTTTTTTTTGTCATCTAGTATTTTTC GCCGAAAGATCGAAGCTCTTCTTAGTTATTTTTCTTCTCTACGTAACTGT CGCCGCCCGCGGAACGGAGTTCGTAGCTAAGAGGCTATTGTTTAGAGTTT GGTCCTATAGTGATAATGCTGCAGCAGGGCGTGCGAGTTGTACTCTGTGG GCAAGTTATGAAAGACCCGTTGGGCTTGACACCCCCCCTCCCCCCCCTCC CCCCCCCCAAAAGGTAGGTTGATCAGGCAAATCGAGCTGCGATTGTGGGA GTGAGAAAGACAGACGTCACCTTTTTGCTTGTCATACTCCAGTATATTTT TGGTATCTTGTATATAATACTTCGAAGTACTACCTACAGCTTCAAGTTTG GATGCCGTCTGAGCTGTCAAGGCAGCACCAGCATCAGCATTCCCTCATGT TTTGTCCGCAATATTCGTGATTGTTTCAAATAATGCCGAGTTGGGTGTTA TTTCATATAGGAGGTTAGGAATCAAAGTCCATGCTCTTGAATAGTTATGG TCAAGGTCGCTGGGCAACAATATTTTGTCGATATCAGATTTTTTTGTCGA TTTTTTTAAGGATACGAGGGGAAGTTGGAATTATTATATGCTATCGTTTC TTAAATTACACTATGTTTCATCACTCCCCCCCCCCCCACACACAAATGCC CTTCACTACCTGCAGCCTTCAACGGGTCGGGAAAATGCATCGACAACGCT CCGCCTGTTCTGGCTGAGGACTACCTCGACATCATGGGACAGCCCATCAA CCCCTCGTGCCGTGACTACCCGAAGGTGAGCTGGGCTGAGAAATGGGGAT GGGAATTTGGTCAGGGGATTTGTCGTGGGGTGCCGCGCGCTGCGAGGGAG TCTTGGGGGGCAGAAAATTTGCAGACAGCGAAATCATAGGGGTGAACTGC TATGGAGGGTAGCTGGAGGCTCGCCTCATGAAAATATTTTACTTGACGAT GCGTTTTTTGTTTTATGTTTTTTTTTTTTTGGGGGGGGGGGCGCATATCG GGGAGACACGTGTGGTTGTAGGATGTTCCGATATGTAAGGAGGCTTTTTG TATGCATAGAATGGGAGCAAACGAGTTGGGGGGGGGGGGGCGCGAAAGTT TCGAAGTTTGAAAACAAAGGGTTGTACAAGATTTACCACCTGCGTGAGGC AGACAACCACATTCCGATGCGGAAGTTTTTTTTCCCCAAATCGCTTTTTT GGTTCTATCATTCTCCATGTTGAAGGCCACAAAAAGAAATGAAGCCGTGG TAAACCGTCCCGTCTCATGGCAGACTTTGGTTGCTGCCGCTGCTGTTCCT CTGATAGCCCAACACCCCGTAACCTCCATGCCAACCAAGATACGCGCGTG GAACTCCTTTGAATTGTCTTGCGCCGCCTGGGAAAATGACAGGCTATGAT CCAGACCGGTATCTCGGCTATCGACGTGATGAACTCCGTCGCCCGTGGGC AGAAGATCCCTCTTTTCTCCGCCGCCGGTTTGCCGCACAATGAAGTGGCA GCGCAGATCTGTCGGCAGGTACGGTTGAGGGCTATACTTTAGGCCAAGGA TTCGAATCATGCACGGTGGGGGGAAAGCTCTGGGCGCTTACAGGGGCCTC TGCGATAGCGCCGCATCTCCTGCCCCGATGTGATAATCGTTAGTACTGTT TGTAAGCATCGTTCGTCTTAGCGTATCTGGGTTTTGCTTTGAAATAAAGT AGACATGAACGGACGTCTCTGTTTTACATTCGTAACTAAACATGGTCCCC ATCCCGGGGCTGCATTATTTTCGTCCCCGGGGATAGTTCTTGTCATCCCC TGGGGTAAAGATTCGCGTCTTCCTCGAGACGGAGAAATTCGCGCTGTCTC CTTTTGATGAGAAATCCCCGGGCGCCTTGAAATTTGATTGGCCACAAACA GTTGGTTAAGTTCCTCCCTCCATGGTGCTGTTTTGTCTCCCGGTGCGATC TATGGAGTTTACAGGAACTGACAGCGTTTTCTCTCAGGGGGCGAGAAAGA AAAAACCCTTTTCTCTTTGGGTGGTTAGTGAACGCCTTCTGTCGGTTCCC CTGACTTCTCGTTTGTATAAAGGAATATGCCCGCCGGGATGAAATAAAGA CGGATGCGTGCAATCACCCCCGTCTCTAGAAAACCAGTCCGACTTCCACC CTAAGGTTTGCGAGATTTGATTCTGCTGCTGTGTACGTTACGACAGGCAT CGCTCGTGAAGCAGAAGGATGTACACGATAGCCACGACGACAACTTCGCC ATCGTGTTCGGTGCCATGGGTGTCAACATGGAAACCGCCCGGTAAAAGAT GCTACAAGCTCATCTTACTTTGCCTACCGTTTGCATCCCGTTTCTCCCGT TAGGACAACGCCTGCTGTTGGGAAATATAGGGTACGTTTTCCGCTCAAGT CTTGAGGTCCTGCTGTTTTTTTGCATATTGTTCATATTCTGCGGTATATA TATAGAGAGAGCTATATATTATATATATATATGCATATTATTCATTTTCT GCGCTATAAAACACTAATATTTTTGTGTCATAAAAAAAACACACACACAC GACTTTGCGGTGACTTGGGAATGAACTTCTTTGAAATTTAACCATAGAAA TTTATTTTCCATGGAAGATAAACGCCATGTATATAGTACGAACATCTTTA CAACGTTGCCCCCGCTTTTTGGTCGGAAAACGCTCCAGAAAAGCGTGCGT GCAGTTAATGGAACTCCCTACGAAGGGAGCAGCAGGCGTATTTGTACAAT AACAACAACTTTCCAGGCAGCTTCCCAGGCAACGTATAAACCCCTCAAGA AAAGAACCCTCCCCGCCCCCATCAAATGTAGCCTTCGCACCCCCTCCGTG CCCGCCCCCCACGAAGACAAACAACACAACATTATTTTTCATTTCCTCCT CTCCCTGTAAACCCCTTTTGCCTTCTTACTATCACCTTCCGAAGATTTTT CCGCAACGATTTCGAGGAGAGCGGCGCGATGCAACGCACGGCGCTCTTCC TTAACCTCGCGAATGACCCGACGATCGAGCGCATCATCACGCCGCGGCTG ACCCTGACGACGGCCGAGTACCTGGCGTACGAGCGCGATCTGCACGTTCT GGTGATCTTGACCGATATGTCCTCCTACGCCGACGCTCTGCGCGAGGTGA GAACACCCGCAAGGGATTCGACGGTATGCGCGTTTAGTGCTAGCACCGGA ACCCGCGCGAGTACGGTCTGGAAACCCCTCAGCACTTATGTGTGTGTGTG TGTGGAACACGTCGGGTTGCTGACTCGTAAGCTCCACTCTTTTTGTTAGA TTAAATAATACCATGGTACCAAATATGCAGAGAAACGGCAGTGAATATCT CCCCGATCATTGCAGACACTGAAAAGATGTGTCATTATAAGCACAGGAAA GGCTGTTTGTTCCCTTCCGAAATCGCGCCTTTTCGTACCCGACCTCTTTT TTGTTTGTTTTGTTTTTGGTTATTATTATTTTTATTTTTTTTATATTATA CTGTTATTGTTATATTTGTACAAACGAAAAGTTAATGACAGGATTTTTCG CAGTAGACATAAATCGCGAGGTTTCCCTTGCGCTCGGTAACAAAAACCGT TATCGCTCTTTTTCTCCATATTTCTTTGGGGAAACTCTCTTTTGGAGGAT GATTCCTCCGGGGACAAGTTTACTCCCTGCCTCCCCCCTCGCCTCTCCTC CCCTTTTTATTTTATTTTACTATTATTTTCCCACAAACCGCATGGGGGAA CCTTCGCGATTGGAGAGCTGGGAGCCAGTTTTGTCTTGTTTTATGTATTA AAAAATCCTAATACCCTCGTCTCCGTCGCAACACCGTTTTGATAATATAG ACTGTTCAGCTCTTATCTATCGTATAGTATTGTTGCGGTTTTTTAGAGGA AAGTAGGGGAGATGAGTGAAAGAAGGATTGCCTTATTTTCCCCGCGGGCT TTTATAGACGGTAAAATTACTTCCATCTTTTCCTCTGCCTCACCCCCGAC CCCCCCCCAACATAAGCATGAAACGACGCCTTATATAGTTCGTACTTTGT CGTTTACATTTGTATTGTACTTTTTGTTTCGAAAATAAAAGCGTTTTCAG TTTTCAGCTACAATGTTATTTTTTTGTATAAATATTTTTAGCTTTTTTAG TTTTTCCAATCTTTACAAAGTCCTACTGTAATTCAATACAAATACAGTTC TTGCGGTACTATCTTATATATATATATAACATATCTGCCCTACATTTTTT ACGTTTTTCATCTACAAAAATATTTACATGTTTGGTACTATGTTACAGAC AAAAATCTCTGCCGGACATGTTGTACGTTTTCTACCTACAAAAATAATTA CATGTTTGGTACTATCTTATATATAACATCTCTGCCGTTCATTTTTTACG TTTTCTAGCTACAAAAATAAATCCATGTTTATACATTTGTGCTTTTTTAC TTACGCAACACAGGTGTCCGCAGCCCGCGAGGAAGTGCCCGGTCGTCGTG GTTACCCCGGTTACATGTATACTGACTTGTCCACCATCTATGAGCGGGCG GGTCGCGTGAACGGCCGCAACGGGTCCATCACCCAGCTCCCCATCCTCAC CATGCCCAACGACGACATCACCCACCCTATCCCCGACCTGACGGGCTACA TTACCGAGGGCCAGGCGAGTCAGATTTTAAGAGATGTGTCGAAAGCTTCT GGAGGTTGATGAGGGGGACGTGGCACAGCTGGAACTACAACATTTTTTGT GATATATTTATGAATTTATTTTTGTTTATTTGTCTCTATCATCGTTATTT TATTTTTTATTTTTTATCATTTCGTTGTTTTGTCTTATTTTATCTTATTT TTGTGCGTGGGGGAGAGAAAAGTCTTGAACATGTTGTGACTCCCTATTTT TTCTCTCCCTAGCCCCACATGTAGGATTTACCGCCCTAGGATAACGACGA TGTTTCGGAGGAGCGTTAGGCGTTATAATAGTCCTATTCTGTTAGTAGCG GTATCCGTGATGTGTTTGCCAACACAGTGAACGCCATCGGCACGCGAATT GCGTGGTCCGTTAAGCTCGGGACTGACCTGATGGCGGTTGACGGTGTTTA TGGACGCCGTCGTGGAAAGCGGGAGGAATCCCGTGAGTAAGCATCAGACT CAGCCTGAGTTGGACAATGATCAGGCTGACGCGGGACAGGACGGCCGAAC CAAACCCGTCTCTCGCGAGACCAAGTTTTCAGGCGCGAACGAGGACAGGG AAATGTTCATTTCTCCTTGTTCAGCTGACCACCACGAGCAGGATTGGCAA CCTTATCCGATTGATCCATATTCTGCTAGAAGTGTCGCTCATTCGGCGTG GCGATATTCCTGGCCAATATACAAAACATACAGTAGATAAGAGTAGAGAG TAGATACAGTACACCCCGCTTACGATAACGGCCCGCGACGTGGCGGCGTG TGTGCAAGTACTACGAATATACTGTACCGAGTAAAAGCGTGAACATTCTT TCGGAAGGGCGGGGGGGGGGGGGCGTGTAGATTATTCCACAGACAATCCG CCACGATCCTCCTGTCAAAACCCTTATTTTTATGGGAGCGCCTATTTGCA GTCCATGGTCTTTCAGAGAGAACCACAGTCCAAACATCATCTTTACTTCT TAGATTGTTTTTTTTTTACCTCTTGGCCAACCCGACCCAACCCGACCCAT ATCGCTAACGCTAACCCAGACCCCCACCCCAGCTGACCGCGTGGTCTCAA TTCATAGCTGGCGTCCGCTTGGTCATAGTACCGTGTGGGCTGATTTTGTG TGCGTCTCTGGTTCGGTTTTGTATCTGGTGCGTACCCAATCTAAGAAGTA AAGATCCATGGCAGTGGGCTGGTTTCTCCTGTTTACAGTATAGATGATGT TTGGACTGTGATTCTCTCTGAAAGTCCATGGACTGCAAATAGGTAAATTC TATTTTTATCTGTATATATTTGTTTTTTAATTAAATTCCTTTGGAAAAAG TCGTGTAGAGGAGGGAAACATATATACTGATACGAGGTACTAAATATTAC CGTATGTTACATTTTCGCCCGAATAAATACCGATTGGGTTTCTCTCATCC CCAATAAACCCTTTTTGTCAAATACTAAATATTGCCGTATGTTATATTTT CACCCGAATAAATACCGATTGGGTTTCTCCCATCCCGAAACCCTTTTTGT CAAATTGCCGTATGATATATTTTCGAATAAATACCGATTGGGTTTCTCCC GTCCCCAAACCCTTTTTGTCATATCCCAAAGCGTACAAAATCGTATCTCA TCCTGAATGTGAACTTGTTTCTATCTCATTTTCTCTCCTTTTTATTTTCC TTTCCACCGTTTTTCTTCCTCTATCTCTATTATTTTTGTCTTTTGGGCGG GTGACAGATCTACCTGGACAGGCAGCTCCACACGAAGGAGATCTTCCCGC CAATCAACGTGCTGCCCTCGCTGTCCCGTCTGATGAAATCGGCCATCGGG GAGGGCATGACCCGTGAAGACCACTGGAACGTGTCCAACCAGCTGTACGC TATGTACGCCCAGGTGAGTGTCAGATCAACCGATCAGGAGAATTTCGTTT CGCGCCCAAGAAGTGGCGCGTGTGGCGTTTGTTTGTTTTTTGGCGCCAGC GGGTTTTCATCTATTACTAGGCGTTTTTCGGACGTACACGATACGGCACA TCGGGAGGCGGTGCCGACTCTGTGCTTCTGTTTTTTGAAGGCTAGTAAAA AAAGTGTGGCGGGTACGTAAGTCAATCAATTTCACCGGTGCAAATTTATG TAGTGATACGTTCCTCCAGGGAACCTGCCAGGTCTTTTCTCCTGTCCCCC TCCGCCGAAAAATCGAACGAAAAAAACAAAACCCACATATTATTAATAAA AAATAACAAAAAAGACATAAGCTTCTTGTTTTTGGAGTCGTTCAGTAATT AAAGGGGGGCGGGGGGGGACCATTTTACCACGTTATGGTTATGATCAATT AACTAAGCTAGGTTGGAAGTGTTTCTTATTAAAAGCCTGTCCCCGATTTC GGGGGACGGAAAAGAACCGGAGCACCCCTTTTCGTTCGAATAAGGTTACC GACCCCATTTTACTAATGTTGCATGCCTCAAACACGTATGATAACTCCAG CAGGGGATTAAACAAGAGAATCCTGGCCGGAAGGAGATGTCTTGATGCCG TCCCCCCGTTGACCCGGGGATAGATTTGTAACACCCCCTGCGCCCCGTTC TCTCACGTGACAAAGTATTATTCTGTGGTATCGGTATCTTATCGGATCTC GCCGTTCTCGTGAAGCACGCCTTCTCAACAATGCTAAACTCCCGTGGGCA GGGCAAGGACGTGCTGGCCATGAAGGCCGTTGTGGGTGAGGAGGCCCTGA GCCTGGAGGACCACCTTTTCCTCAACTTTGTCGAAAAGTTCGAAGCCAAG TTCGTTTCGCAGGGGCCTTACCAGGTGTGTGTGTGTGTGTGTGTGATAAA GGAAGAGAAGGAGAAGCCTACATTTTCCCTGCTTTTTTTTTTTTGTTCGG CGGTGTTGGGCGTTAGTTTTATATTTAGTACTATAATCCTGCTATGAATA TTTAATAGTTTGGAAAAGAAGTTGGCCGAAACTTGTATTGCGAGGTGCCA GCTGCGGTTAGACATGCCTCTCCCTTCCCCTACCCCCCGTTGTTTGGTGC GCACGGAGGGGGGGGTGGAGTTCGTGGAACGTGGTCAGGTGGTTTGTGGA GAAGACACGACCAATTTTGTGCCATTGTGGTCAGGTTCAAGCTTTTCGAT TTTATGACACCAAAATATGTTACAATAAACAATGAACGTACCCACGGATG TCTCAATAAGCATCTCTATTATTTAATAGCGCGTTATCTTTCTCCTTCGA ATCGATTCTCCGCGAAAAGTTCCCCTCTTCAACCTTTGGGATTTAGTACT ATTAATAATAGCCTGATAGAATGTAGAAAATTGTCTCGGCAACGGGAGAG CCTCTATGGCATTAGTTACCAATGGCTGTGTATTGTCTGCGTTCACTATA TGTCGGTCGAGGTGTATATGGGGCTGTGTGGGACGGTTGTTAAAATTACC GAGTATGGTGTTGAGAACCACGTTCAATCGCGCATCGTTTATTTCTCGTC CGCTTGTTCCCGACTCGACGCCGTCCTCCCCTTGTCCCCCCTCCCCTTTT CCCCTCTGCCGCGTAACGCCTGGGTTTCCAACCAAAATCCCTTTAAACGC GCGCGAAGGCGCGGTCTATCTTCGAGTCGCTCGACCTCGCGTGGTCCCTG CTGCGGTCGTTCCCCAAGGAGCTGCTCAAGAAGATCACCAAGAAGCAGCT CGAGAGCTGGTACTCCCGCCGTGCGGCCGCCAAGCAAGCTGACGCGTCCG ACCTGGTCACCGCAGGAGAGAAAGAGGAGGAGTAGATAGGGAGAGAGAGA AGAATATATGTCAAGAGGAAGTTGTGTTGTGCATGCAGGCGCGGGGCAGA AGACGCATCAGATGTGTAGGTTCTCGCCCTGACCGCTTTCCTTGCTTTTG ACGACGCACTTGTTTTACGTGGTAACTTTGACCACCTCCTCTCTCCCCCC AACTATTCCGAAAGACTTCCAAAATTAAAAGCTCGTTGCCTGCGCTATAT ACAGTAGCTCTAGTATAAAAGACACTGTGACGTGACATGGCGGCTTTTTG ACAAGTCCTCCGGTTGTAGATTTGGTCGGTTAAGTTTATTCCTTCGCCAT GGAGCGGAGCAGCGCTCTCTCCGCCGATGTGTAGATCGAGTAGTGACAGT GGTTGTAGCGTTCAGGCAATATTACAGCTACATAATGTGCTATAGTTGGT ATGTGGAGTACGTCCGCTCCGTCGCTCGCGGTCTGTCTTTCGGCACACAA ATATTAAGTGAAGAGTCGACCGAAAAGAAAGCGTGGATTAGAGGCGTTCT TTTAGGGGGGAGGGGTTGTTTGAACAGGTAGGCCTGCCTGATAATTGACC CTTTTTCTCAGTAGAAGGGAGAGGAAACAAAAGCTCTCGGCAAACACATG ACCCGCCATTCCCGCGAGAAATATTCTTGATCGCACGAGGGTTAATGTCA TCCTTCCCCCCTCTCTCATCACGCGTCACGACACGGCCCATCCCCTCATT TTTTAATTCGCCCTTGAGTTAGAAAATCACATCCCTGCCGCCATGCACCG CGGAAAAATCGTCGGCGGATGGGCGAGGTTAGCCCTTTACATATTTGTTT GATTATTTGTGTAGAGATTTGTTCCTGCTGACGATAACAGGGTTTATCGA CTTGCTACAATTTCACAGCCCATCCCGCATGACTGTGGTCCTCTATGATA GTATCTCTTCTCTATCCATGGTATGTGTTTTCATCCCATTTATTCTAGAC GTCAGACTTGTGGATGTACCAGCCGGGGTCACACAGGATTTCTCCACCTT CCTTCTGCGGTGTGCTTGCCTTAATTTTTCCCGCTAGAAGGATTCAGCCG TTCCCTTTCCCTCGTCGACCGTGAAGTCGAATTTTGTGTACCAACG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig1113:133272..148517-

>mRNA_A-nodosum_M_contig1113.7.2 ID=mRNA_A-nodosum_M_contig1113.7.2|Name=mRNA_A-nodosum_M_contig1113.7.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1521bp|location=Sequence derived from alignment at A-nodosum_M_contig1113:133272..148517- (Ascophyllum nodosum dioecious)
ATGGCGAACATCATGGGGCCCCTCGACGCGCACACCGCGGCGGTCGTACG
CGATTACCACGTCGAGCCTAGAATGGAGTACAGGACGATCTCGGGTGTTA
ACGGTCCGCTGGTTATCCTGGAGAACGTGAAGCTGCCCAAGTACGCCGAG
ATCGTCGATCTGACGCTCTCGACGGGGGAGAAGCGCCAGGGACAGATTCT
GGAGGTTTTCGGCAGCCGCGCCGTCGTCCAGGTATTCGAGGGCACCTCGG
GCATCGACAACAGGAACACGAGGGTATCCTTCACGGGCGACGTGCTCAAG
ATGGCCATCTCCGAGGAGATGCTTGGGAGGGCCTTCAACGGGTCGGGAAA
ATGCATCGACAACGCTCCGCCTGTTCTGGCTGAGGACTACCTCGACATCA
TGGGACAGCCCATCAACCCCTCGTGCCGTGACTACCCGAAGGCTATGATC
CAGACCGGTATCTCGGCTATCGACGTGATGAACTCCGTCGCCCGTGGGCA
GAAGATCCCTCTTTTCTCCGCCGCCGGTTTGCCGCACAATGAAGTGGCAG
CGCAGATCTGTCGGCAGGCATCGCTCGTGAAGCAGAAGGATGTACACGAT
AGCCACGACGACAACTTCGCCATCGTGTTCGGTGCCATGGGTGTCAACAT
GGAAACCGCCCGATTTTTCCGCAACGATTTCGAGGAGAGCGGCGCGATGC
AACGCACGGCGCTCTTCCTTAACCTCGCGAATGACCCGACGATCGAGCGC
ATCATCACGCCGCGGCTGACCCTGACGACGGCCGAGTACCTGGCGTACGA
GCGCGATCTGCACGTTCTGGTGATCTTGACCGATATGTCCTCCTACGCCG
ACGCTCTGCGCGAGGTGTCCGCAGCCCGCGAGGAAGTGCCCGGTCGTCGT
GGTTACCCCGGTTACATGTATACTGACTTGTCCACCATCTATGAGCGGGC
GGGTCGCGTGAACGGCCGCAACGGGTCCATCACCCAGCTCCCCATCCTCA
CCATGCCCAACGACGACATCACCCACCCTATCCCCGACCTGACGGGCTAC
ATTACCGAGGGCCAGATCTACCTGGACAGGCAGCTCCACACGAAGGAGAT
CTTCCCGCCAATCAACGTGCTGCCCTCGCTGTCCCGTCTGATGAAATCGG
CCATCGGGGAGGGCATGACCCGTGAAGACCACTGGAACGTGTCCAACCAG
CTGTACGCTATGTACGCCCAGGGCAAGGACGTGCTGGCCATGAAGGCCGT
TGTGGGTGAGGAGGCCCTGAGCCTGGAGGACCACCTTTTCCTCAACTTTG
TCGAAAAGTTCGAAGCCAAGTTCGTTTCGCAGGGGCCTTACCAGGCGCGG
TCTATCTTCGAGTCGCTCGACCTCGCGTGGTCCCTGCTGCGGTCGTTCCC
CAAGGAGCTGCTCAAGAAGATCACCAAGAAGCAGCTCGAGAGCTGGTACT
CCCGCCGTGCGGCCGCCAAGCAAGCTGACGCGTCCGACCTGGTCACCGCA
GGAGAGAAAGAGGAGGAGTAG
back to top