mRNA_A-nodosum_M_contig1112.7.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1112.7.1
Unique NamemRNA_A-nodosum_M_contig1112.7.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: D7FRQ9_ECTSI (Dynein light intermediate chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ9_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 7.450e-161
Identity = 309/506 (61.07%), Postives = 341/506 (67.39%), Query Frame = 3 
Query:  111 HQRGIAETKVAGATNSNVE-NLWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEY--AASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARG--FHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSDAAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXEAG--------------EAVEPEEAWLSSLSKQVAGL----RWQNAKKAALKTASESKSPRGISSKDPDPRSFFASLLASGSVSSVASPP 1559
            H    A     GAT +    NLWETMLRDAMRR+RLP  TL+ VGP+GCGKS+LLDTFLE    A++ NPSG   XXXXXX                XXXXXXXXXXXXX            G  FHPVL+Y+YLDA DP+EQG+ERD+SPPRVSVW CS LEF+ LL+TVLRPE+L N  V V VDLSRPWE MDS+EKWT  +EKH+  LL QLS+GAQDDLR A+KERL   R  A++IGG                G LGDGVLE+NLGVP+VVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKD VNC LL RYLLSC+YPDAF  SEEGQTSDAAFIPAGWDSKRLIDGLLSP+KTPWGP ATF+EVV+P                        XXX                 E VE EEAWLSSL KQVAG     RW +A  AA K A  SKSPR   +  PDPRSFFA+LLA+GS     SPP
Sbjct:    9 HAPAPASASTVGATTAAATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASTNNPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERL---RGKAKEIGGXXXXXXXXXXXXXXXXG-LGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDSVNCSLLHRYLLSCVYPDAFSFSEEGQTSDAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPPPGAVGRGASGSGMGGWMDGDSGGXXXXXXXXXXXXXXXXXXXXETVESEEAWLSSLGKQVAGTDSKSRWPSAIAAAAKHAKASKSPRKAPANAPDPRSFFANLLATGS--GAGSPP 508
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: A0A7S3XSQ8_HETAK (Dynein light intermediate chain (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSQ8_HETAK)

HSP 1 Score: 215 bits (548), Expect = 1.830e-59
Identity = 132/372 (35.48%), Postives = 187/372 (50.27%), Query Frame = 3 
Query:  165 ENLWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQ------TSDAAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVVIP 1262
            EN+WE +L +A  + RLPD  L++VG    GK  LL             SG +         +   +  GP    G                            PVL YS++DA D +    ERDD+P R+S W   ++ F+ LL      E+L +T +A+T+DLS+PW+ M +LEKW  V+E+ I  +  QLS+G QD+L   I+   +A++   E               N S         +++NLGVPL+V+GCK D++++ETFE QQ+L FIQQ LR+FC +YGAAL + SA+ G N G LR YLL   +P  F              +D  FIP+GWD+ +LI+ L    KT W P A F  V+ P
Sbjct:   11 ENIWEHLLAEASSKTRLPDAQLVVVGDPQSGKKTLLKKLC---------SGSSDGSEVLETSLLDDSSNGPSDEDG---------------------------QPVLFYSFMDAVDLTANEFERDDTPARISTWSLGDVSFENLLSIPFTAEKLKHTMIAITLDLSKPWDLMRNLEKWVKVLERAIVKVRSQLSVGDQDELM-QIQNDYIASQTEVE---------------NSSK--------IQRNLGVPLMVIGCKLDAIEAETFEHQQKLQFIQQHLRKFCYQYGAALCFASARAGTNLGRLRGYLLHRAHPGHFPGGXXXXXXXAQVANDELFIPSGWDTMKLIEDL-EQAKTSWAPDAAFETVITP 321
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: A0A835Z2Q1_9STRA (Dynein light intermediate chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q1_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.120e-41
Identity = 131/436 (30.05%), Postives = 174/436 (39.91%), Query Frame = 3 
Query:  132 TKVAGATNSNVENLWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDPSEQ---GSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVA-----------VTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSDAAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGEAVEPEEAWLSSLSK 1397
            T V  +T+      W+ +LR+A    R PD  ++ VGP+G GK+AL++              GAA                                      D T       FHPVLAY Y +A D + Q   GS   DSPPRVSVW CS+  F  +L  V    Q A    A           V VDL+RPWEA+ + E W A +E            G + D R  +    + A  GAE+                 S GG+                            E+Q+R  F+Q+ LRR CL+ GAALVY SA+ G NC  L+R +L  LYP AF C+ + Q S A +IP GWDS  L+D L+      W     +++V+ P                           E  E +EPE  WL+ LSK
Sbjct:    2 TAVEASTSDTAGGSWDALLREAATAERPPDSVIICVGPRGSGKTALVERLT-----------GAAPRKQ----------------------------------DATGEEPPPDFHPVLAYDYFEARDAAAQSSSGSAFSDSPPRVSVWSCSDARFVDILTAVTASTQHAPPPPAAAGVAAPALALVAVDLTRPWEAVPAAEAWLAALE------------GVRGDARAVVVGCKLDAAGGAER----------------ESGGGM----------------------------ERQRRELFVQRRLRRLCLERGAALVYASARTGDNCAALQRLVLHRLYPSAFSCAPDAQVSGAVYIPWGWDSLELVDALMGGGVAGWSDDLPYAKVLPPPQGAREGGRGARQQ-------------EPLETLEPESEWLAELSK 323
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: A0A421FAE9_9STRA (Dynein light intermediate chain n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FAE9_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.140e-39
Identity = 112/367 (30.52%), Postives = 177/367 (48.23%), Query Frame = 3 
Query:  171 LWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDPSEQ---GSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSD--AAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVV 1256
            LW+ MLRD   R++LP   LL+VG    GKSALL    E                     V++ AE                            AA+A     +LAY+ +D  DP  +   G   +D    +  W  ++L  + L++  ++P+ L  T VA+ +D+SRPW    SLE+W + +E  +   ++QLS  A+++L  AIK+ ++     +                + S+   + +GVL KNLGVPLV+V  KAD       E   ++ +I+ +LR+F ++YGA++V+TSAK G N   LR+Y+L   YP  F+ +E  Q  D  + FIP+G+DS  L++  L   +  W     F ++V
Sbjct:    9 LWQQMLRDCSVRSKLPTANLLVVGDAESGKSALLSRLDETKLG-----------------VSEAAE----------------------------AADAHAVDTLLAYTTVDVLDPRAKESGGDASEDVMAHIGTWSLNDLSLKDLIKIAVKPQNLQKTVVAIVLDMSRPWTIKSSLEQWLSALEGQLLEQINQLSPEARNELYAAIKQHILTYEDPSVDH-------SAPTPMDTSTNEFMEEGVLSKNLGVPLVIVVAKADLRP----ENSVKMDYIEYTLRQFAIRYGASVVFTSAKSGTNVNALRKYILHRAYPTQFKFTEAPQLVDHNSIFIPSGYDSFELVNQSLVGSQARWPIDKPFEKIV 319
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: M4BRF2_HYAAE (Dynein light intermediate chain n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRF2_HYAAE)

HSP 1 Score: 160 bits (406), Expect = 5.500e-39
Identity = 119/372 (31.99%), Postives = 181/372 (48.66%), Query Frame = 3 
Query:  162 VENLWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDP----SEQGSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGG-LGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSD--AAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVV 1256
            V + W+ MLRD   R +LP  +LLLVG    GKSAL                           V +L E                      GG + +A +      +LA+  LD  DP    S +  E DD    V  W  ++L  + L++ V++P+ L  T VAV +DLSRPW    SLE+W + +E  +   ++QL+  A+++L  AIK+ ++A    +            V    ++SA   + +GVL KNLGVPL+ V  KAD L+ E   Q   + +I+ +LRR  ++YGA++V+TSAK G N   LR+Y+L   +P  F+ +E  Q  D    FIP+G+DS  L++  L+  +  W     F ++V
Sbjct:    5 VVDRWQQMLRDCSVRCKLPTVSLLLVGDTESGKSAL---------------------------VARLDEA--------------------KGGHSEAAGSPPAVDSLLAFQTLDVLDPRAKESGESQESDDVIAHVETWSLNDLSLKDLIKMVVKPQTLYKTVVAVVLDLSRPWTIKSSLEQWLSALEGQLLDQINQLTSEARNELYAAIKQHILAYEDPSID--------HSVPTPMDTSASEFMEEGVLSKNLGVPLIFVVAKAD-LRPENSVQ---MDYIEYTLRRVAVRYGASVVFTSAKTGSNVDTLRKYILHRAHPSQFKFTEPPQLVDHNTIFIPSGYDSFELVENSLAGSQARWPTDKPFEKIV 317
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: A0A6A4FS02_9STRA (Dynein light intermediate chain n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FS02_9STRA)

HSP 1 Score: 160 bits (404), Expect = 9.930e-39
Identity = 116/370 (31.35%), Postives = 177/370 (47.84%), Query Frame = 3 
Query:  165 ENLWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGA----EKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSD--AAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVV 1256
            E+LW+ MLRD   R++LP   LL+VG    GKSALL    E                         A+  P  A                      A  AR    +LA+  LD  DP  +  E +D    +  W  ++L  + L++  ++P+ L  T VA+ +DLSRPW    SLE+W + +E  +   ++QL+  A+++L  AIK+ ++A    +    E    D            S+   + +GVL KNLGVPLV+V  KAD       E   ++ +I+ +LR+F ++YGA++V+TSAK G N   LR+Y+L   YP  F+  E  Q  D  + FIP+G+DS  L++  L   +  W     F ++V
Sbjct:    5 EDLWQQMLRDCSVRSKLPAANLLVVGDAESGKSALLARLDE-------------------------AKLAPSEA----------------------ADEARAVDTLLAFKTLDVLDP--RAKESEDVMAHIGTWSLNDLNLKDLIKIAVKPQTLQKTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLTPEARNELYTAIKQHILAYEDPSVDHSEPTPMD-----------TSTNEFMEEGVLSKNLGVPLVIVVAKADL----RLENSVKMDYIEYTLRQFAIRYGASVVFTSAKTGSNVDTLRKYILYRAYPSQFKFIEPPQLVDHNSLFIPSGYDSFDLVNQSLVGSQARWPTDKPFEKIV 310
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: A0A3M6VKG5_9STRA (Dynein light intermediate chain n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKG5_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.460e-38
Identity = 113/368 (30.71%), Postives = 177/368 (48.10%), Query Frame = 3 
Query:  165 ENLWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDPSEQGSE--RDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSD--AAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVV 1256
            ENLW+ MLRD   R++LP   LLLVG   CGKSALL    E                         A++GP   T                 + T   +      +LA+  LD  DP  + +E  R D    +  W  ++L  + L++  ++P+ L  T VA+ +DLSRPW    SLE+W + +E  +   ++QL    +++L  ++K+ ++     +                + S+   L +GVL KN+GVPLV++  KAD       E   ++ +I+ +LR+F L+YGA++V+TSAK G N   LR+Y+L   Y   F+ +E  Q  D  + FIP+G+DS  LI+  L   +  W     F ++V
Sbjct:    5 ENLWQQMLRDCSVRSKLPVVNLLLVGDAECGKSALLSRLDE-------------------------AKRGPSQTT-----------------NETHTVDT-----ILAFKTLDVLDPHVKRAEMMRQDVMAHICTWSLNDLTLEDLIKIAIKPQTLQTTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLPSEERNELYASLKQHILTYEDPSVDH-------SAPVPMDTSTNEFLAEGVLSKNIGVPLVIIVAKADLRP----ENSVKMDYIEYTLRQFALRYGASVVFTSAKTGSNVDTLRKYILHRAYSCQFKFTEPPQLVDRTSIFIPSGYDSFELINQSLVGSQARWPIDKPFEKIV 314
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: K3WLE9_GLOUD (Dynein light intermediate chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLE9_GLOUD)

HSP 1 Score: 155 bits (392), Expect = 3.970e-37
Identity = 110/376 (29.26%), Postives = 181/376 (48.14%), Query Frame = 3 
Query:  144 GATNSNVENLWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDPSEQ---GSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSD--AAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVV 1256
            GAT +N   LW+ +LR++  R++LP   LL+VG    GKSALL T L+E                  A+  Q     P+G                                +LAY+ ++  DP  +   G   DD   ++  W  ++L  + L++   +P  L +T  A+ +DLSRPW    SL++W++ +E  +   ++QL   A+++L GAIK+ ++     +                + S++  + +GVL KNLGVPL+++  KAD     +     ++ +I+  LR+F +KYGAA+ YTSAK G N   LR+Y+L   YP  F+  +  Q  +  A  +P+G+DS +L+D  L   +  W     F ++V
Sbjct:   10 GATGTN---LWQQILRESSVRSKLPTANLLVVGDAESGKSALL-TRLDE------------------AMTPQQGPHDPQG-------------------------QPHAIDTLLAYTTMNVIDPKAKESGGDASDDIIAKIRAWRFNDLSVKDLIRIAAKPHALKHTVAAIVLDLSRPWTIKSSLDQWSSALEGELLHQINQLPPDARNELYGAIKQHILTYEDPSIDH-------SAPTPMDTSTSEFMEEGVLSKNLGVPLILIVAKADLRPDNSL----KMDYIEYVLRQFAIKYGAAIFYTSAKTGANIDTLRKYILHRTYPSQFKFMQSPQLVERGAILVPSGYDSFQLVDQSLLGSQPRWSNDKPFEKMV 327
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: G4ZC79_PHYSP (Dynein light intermediate chain n=19 Tax=Phytophthora TaxID=4783 RepID=G4ZC79_PHYSP)

HSP 1 Score: 150 bits (378), Expect = 2.420e-35
Identity = 110/363 (30.30%), Postives = 170/363 (46.83%), Query Frame = 3 
Query:  183 MLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDPSEQ---GSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSD--AAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVV 1256
            MLRD   R++LP   LL+VG    GKSALL    E                         A+  P  A                      A  A     +LA+  LD  DP  +   G   +D   ++  W  ++L  + L++  ++P  L  T VA+ +DLSRPW    SLE+W + +E  +   ++QL+  A+++L  AIK+ ++A                     + S+   + +GVL KNLGVPLV+V  KAD       E   ++ +I+ +LR+F ++YGA++V+TSAK G N   LR+Y+L   YP  F+ +E  Q  D  + FIP+G+DS  L++  L   +  W     F ++V
Sbjct:    1 MLRDCSVRSKLPAANLLVVGDAESGKSALLARLDE-------------------------AKLAPSEA----------------------ADEAHAVDTLLAFKTLDVLDPRAKESGGDASEDVMAQIGTWSLNDLNLKDLIKIAVKPRTLQKTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLAPEARNELYAAIKQHILAYEDPTVDH-------SAPTPMDTSTNEFMEEGVLSKNLGVPLVLVVAKADLRP----ENSVKMDYIEYTLRQFAIRYGASVVFTSAKTGSNVDTLRKYILHRAYPSQFKFTEPPQLVDHNSLFIPSGYDSFELVNQSLVGSQARWPTDKPFEKIV 305
[Close]
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Match: A0A5D6XQ24_9STRA (Dynein light intermediate chain n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ24_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.160e-34
Identity = 113/369 (30.62%), Postives = 174/369 (47.15%), Query Frame = 3 
Query:  168 NLWETMLRDAMRRNRLPDGTLLLVGPQGCGKSALLDTFLEEYAASANPSGGAAXXXXXXAVVTQLAEKGPEGATGXXXXXXXXXXXXXVGGDNTSAANARGFHPVLAYSYLDATDP----SEQGSERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAMDSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGDGGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCSEEGQTSD--AAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVV 1256
            NLW+ +LR++  R+ LP   LL+VG    GK+ALL                            +LA     GA+                     AA A     +LA + LD  DP    S  G   DD   ++  W  +EL  + LL+   +P  L +T  A+ +DLSRPW    +L++W++ +E  +   ++QL+  A+++L   IK+ +++     +    D  G   +   + S+   L +GVL KNLG+PLVVV  KAD     +     ++ FI+  LR+F +KYGAA+ YTSAK G N   LR Y+L   +P  F+ +   Q  D  A  +P+G+DS  L+D  L   +  W     F ++V
Sbjct:    8 NLWQQILRESSVRSELPVANLLVVGDPESGKAALL---------------------------ARLAAA-QHGAS--------------------DAALAAATDALLACATLDVLDPRAKDSGGGDVSDDVIAKIRTWRLNELSAKELLRIAAKPLALKHTVAAIVLDLSRPWTIKSALDQWSSALEGELLQQINQLAPEARNELYNGIKQHILSYE---DPQAVDHSGPTPM---DTSTNEFLAEGVLSKNLGIPLVVVVAKADLRPDNSI----KMDFIEYVLRQFAIKYGAAIFYTSAKTGANVDALREYVLHRAFPSQFKFAHSAQLVDRGAILVPSGYDSFELVDQSLLGSQPRWASDKPFEKMV 318
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1112.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ9_ECTSI7.450e-16161.07Dynein light intermediate chain n=2 Tax=Ectocarpus... [more]
A0A7S3XSQ8_HETAK1.830e-5935.48Dynein light intermediate chain (Fragment) n=1 Tax... [more]
A0A835Z2Q1_9STRA1.120e-4130.05Dynein light intermediate chain n=1 Tax=Tribonema ... [more]
A0A421FAE9_9STRA1.140e-3930.52Dynein light intermediate chain n=5 Tax=Phytophtho... [more]
M4BRF2_HYAAE5.500e-3931.99Dynein light intermediate chain n=1 Tax=Hyaloperon... [more]
A0A6A4FS02_9STRA9.930e-3931.35Dynein light intermediate chain n=1 Tax=Phytophtho... [more]
A0A3M6VKG5_9STRA1.460e-3830.71Dynein light intermediate chain n=2 Tax=Peronospor... [more]
K3WLE9_GLOUD3.970e-3729.26Dynein light intermediate chain n=1 Tax=Globispora... [more]
G4ZC79_PHYSP2.420e-3530.30Dynein light intermediate chain n=19 Tax=Phytophth... [more]
A0A5D6XQ24_9STRA4.160e-3430.62Dynein light intermediate chain n=1 Tax=Pythium br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1112contigA-nodosum_M_contig1112:185948..196474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRQ9
Preferred nameDYNC1LI1
PFAMsDLIC
Model size2594
Max annot lvl2759|Eukaryota
KEGG koko:K03685,ko:K10416
KEGG Pathwayko03008,ko04145,ko04962,ko05132,ko05205,map03008,map04145,map04962,map05132,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000226,GO:0000278,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0000922,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003006,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005868,GO:0005874,GO:0005875,GO:0005886,GO:0006403,GO:0006810,GO:0006887,GO:0006888,GO:0006928,GO:0006955,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007088,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0007409,GO:0008088,GO:0008090,GO:0008150,GO:0009653,GO:0009719,GO:0009987,GO:0010033,GO:0010564,GO:0010769,GO:0010965,GO:0010970,GO:0010975,GO:0012505,GO:0012506,GO:0015630,GO:0015931,GO:0016020,GO:0016043,GO:0016192,GO:0016358,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019882,GO:0019884,GO:0019886,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030030,GO:0030071,GO:0030141,GO:0030154,GO:0030182,GO:0030286,GO:0030659,GO:0030667,GO:0030705,GO:0031090,GO:0031175,GO:0031344,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032886,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0035371,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045321,GO:0045504,GO:0045595,GO:0045664,GO:0045787,GO:0045931,GO:0046605,GO:0046903,GO:0046907,GO:0048002,GO:0048193,GO:0048468,GO:0048477,GO:0048518,GO:0048522,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050773,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051028,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051259,GO:0051260,GO:0051493,GO:0051640,GO:0051641,GO:0051642,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051983,GO:0060284,GO:0061564,GO:0061842,GO:0065003,GO:0065007,GO:0070507,GO:0070820,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090068,GO:0090231,GO:0090232,GO:0090266,GO:0090267,GO:0097159,GO:0097367,GO:0097458,GO:0097708,GO:0098588,GO:0098687,GO:0098805,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0101003,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:1901265,GO:1901363,GO:1901976,GO:1901978,GO:1901987,GO:1901990,GO:1902099,GO:1902494,GO:1902850,GO:1903047,GO:1903504,GO:1905818,GO:1990089,GO:1990090,GO:1990752,GO:2000026
Exons6
Evalue1.32e-166
EggNOG OGsKOG3905@1|root,KOG3905@2759|Eukaryota
Ec32 ortholog descriptionD1LIC, cytoplasmic dynein 1 light intermediate chain
Ec32 orthologEc-00_003490.1
EC3.1.26.3
Descriptiondynein heavy chain binding
Cds size1533
COG categoryZ
BRITEko00000,ko00001,ko01000,ko03009,ko03019,ko03036,ko04131,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1112.7.1prot_A-nodosum_M_contig1112.7.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1112 186929..196394 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866507.5681956-UTR-A-nodosum_M_contig1112:185947..1869281680866507.5681956-UTR-A-nodosum_M_contig1112:185947..186928Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1112 185948..186928 -
1680866507.6494794-UTR-A-nodosum_M_contig1112:196394..1964741680866507.6494794-UTR-A-nodosum_M_contig1112:196394..196474Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1112 196395..196474 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866507.5807686-CDS-A-nodosum_M_contig1112:186928..1869821680866507.5807686-CDS-A-nodosum_M_contig1112:186928..186982Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1112 186929..186982 -
1680866507.5998087-CDS-A-nodosum_M_contig1112:187495..1875911680866507.5998087-CDS-A-nodosum_M_contig1112:187495..187591Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1112 187496..187591 -
1680866507.6088986-CDS-A-nodosum_M_contig1112:188208..1885291680866507.6088986-CDS-A-nodosum_M_contig1112:188208..188529Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1112 188209..188529 -
1680866507.6180046-CDS-A-nodosum_M_contig1112:188757..1888731680866507.6180046-CDS-A-nodosum_M_contig1112:188757..188873Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1112 188758..188873 -
1680866507.630282-CDS-A-nodosum_M_contig1112:189138..1894691680866507.630282-CDS-A-nodosum_M_contig1112:189138..189469Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1112 189139..189469 -
1680866507.6412222-CDS-A-nodosum_M_contig1112:195779..1963941680866507.6412222-CDS-A-nodosum_M_contig1112:195779..196394Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1112 195780..196394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1112.7.1

>prot_A-nodosum_M_contig1112.7.1 ID=prot_A-nodosum_M_contig1112.7.1|Name=mRNA_A-nodosum_M_contig1112.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=511bp
MAAASILTRSHQRGIAETKVAGATNSNVENLWETMLRDAMRRNRLPDGTL
LLVGPQGCGKSALLDTFLEEYAASANPSGGAAAAAAAPAVVTQLAEKGPE
GATGAAAAGAAATSAAGVGGDNTSAANARGFHPVLAYSYLDATDPSEQGS
ERDDSPPRVSVWCCSELEFQGLLQTVLRPEQLANTTVAVTVDLSRPWEAM
DSLEKWTAVVEKHIKGLLDQLSLGAQDDLRGAIKERLMAARAGAEKIGGD
GGGGRLVGEGNESSAGGLGDGVLEKNLGVPLVVVGCKADSLQSETFEQQQ
RLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLRRYLLSCLYPDAFRCS
EEGQTSDAAFIPAGWDSKRLIDGLLSPEKTPWGPQATFSEVVIPPPEVAR
RAREGNNDDSWGNGAAAAGEEEAGEAVEPEEAWLSSLSKQVAGLRWQNAK
KAALKTASESKSPRGISSKDPDPRSFFASLLASGSVSSVASPPTLRKRSE
DRRARREAPP*
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mRNA from alignment at A-nodosum_M_contig1112:185948..196474-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1112.7.1 ID=mRNA_A-nodosum_M_contig1112.7.1|Name=mRNA_A-nodosum_M_contig1112.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10527bp|location=Sequence derived from alignment at A-nodosum_M_contig1112:185948..196474- (Ascophyllum nodosum dioecious)
ACTTCACCCACGAGATTTGGGTCATTTGACGGGCAAACGCGTTATCAGCT
GGACGATACACGCCCAAGAGATCCGTTGAGATGGCGGCTGCTTCGATATT
AACGAGGTCTCATCAGCGTGGTATAGCTGAAACGAAGGTGGCCGGCGCGA
CCAATTCAAACGTCGAAAACCTCTGGGAAACCATGCTCCGGGATGCTATG
CGAAGAAACAGGCTCCCGGACGGGACCCTCTTGCTCGTGGGCCCCCAGGG
ATGCGGCAAATCCGCTCTGCTTGATACGTTCTTAGAAGAATATGCAGCAA
GCGCTAATCCTTCTGGAGGGGCAGCCGCGGCCGCCGCAGCCCCCGCCGTC
GTTACACAGCTGGCAGAAAAGGGTCCGGAGGGTGCCACCGGGGCTGCAGC
AGCAGGGGCCGCCGCAACCTCAGCTGCCGGCGTCGGTGGCGACAACACCA
GCGCGGCAAACGCTAGAGGCTTCCACCCTGTACTAGCGTACTCGTATCTA
GATGCGACGGATCCTTCGGAACAGGGTTCGGAACGTGATGACTCCCCCCC
ACGTGTTAGCGTCTGGTGTTGCAGCGAGCTGGAGTTCCAAGGCCTGCTCC
AGACGGTGTTACGGCCGGAACAACTCGCGAACACCACGGTGGCCGTTACC
GTGGATCTGTCGCGACCGTGGGAGGCAATGGACTCTTTGGAGAAGGTACG
CAAGTACGAGAGAGAGACGGAGTGCAGGAATTTGCCATCAATAACGTACG
GGTAGTGTTTTTCGTGTACCCCACATTTGAAAGCGCAGCAGAATCTCTTC
AACCGAGGAGGAAGGGCGCCCAATATTCTTCTATTTTTCAGAGTGTCCCG
AGAGAACAACTGATGTCATGTTTAACTTTCATGTTCGATAGTACTGTCTG
TGCTTTACTGGCCACATCAATCCGCCATGCCGACATGATTGCCGTCGACC
TTCACGAGGTACGAGCTCTGACAAAGAGCTGATGACCGTGCTGTGAGTAC
TAAACTACCTATTTCGCTCACCGCCGAATACGAAAGACAATCTTGACCAT
AGCACAGAAAAACGTTCTTGGCCTCCCGTGTGAAGGTGCCCCCCCTCGTA
AATCAACACTTCACCAAACCAATTACTGTACACACAGCAGTGTTCTGTTC
GATTTCAGCGCCAGAGTACGGCAATTGCCAATGTACAAGACAGGAGGTGT
GCTCCCTTCTTGGTGCTCTCCATCGCCGAGAGACAGTGCATCATTAGGAC
AGTATTCAGAGCAGTTTTAAGGGCAGAGTTGTGCTCGATCTACGCGAGGC
CTGACAAGTTTTCAACGGTTTTCCTTGTATGTCGATCGCTCTCGCCCCAC
TACTGACTTACGAATAACATCGTACAGACCGTGCATGTCAAGGGCGACTG
CAGTAATCGCTCTGATTTCCTCCTGAACAATCGTTCGACGGGCACAGAGC
GCGCTCCAGGTTTAGTATTAGGGTAGACAACTAACTGATTACAATAGCAG
GATTTAAGGGTGCCGTATACACAGTATGGATTTTTATCTAGAGTTCCGTA
TTTTGGAGCTGTTCCAATTCGGAAAAAAAGATGAAATTCTTGACCAAGAC
CATAATATCCTATGGGGCTGGAAATTCAAAATTCTTGAAAAATGAAATTG
GGTGGATTTCGAATTTCGGGCGAACGTCTGTATCCCAGCATAAAATTATC
TTATGGACTCTTTTTTTTCTTTTTCTTTTTTCTTGAATCTCACTTATAGC
CGATGGACCTCATCATTACCATCCTGCCTGTGGTCACAAAGGATCTTCCC
ATCTCTCCCCGGTTCACGCCTTACAATTTTTTATCGCGATGCAAGTTCAG
CACTCTTACAACTCATCAACCAATGGTTGAATTTTACTTACTCACGTTCC
CACGCTTTCCGTTACGAAAGAAATAACACAAATCCTACTTTGGTAAGAAT
CGAACTCACGACTTCCGCACTAGCAGGTGTGCAGGTTAACTACTAGACCA
CTCGGGCGACGAGCTCCTGGAAACTGAAAATTAAACAAAGTCGTCATGGA
GGCGTACTCGATACGAAATGATTGGTTGAAGAAATAGAGAGAGGACGATA
CGACCTCGGGCAACCCTCTGAGGGGCATGCGTCAGACATATGTTTGTGTT
CACACACACACCAGCAGTGTAACCTCCAACATGCTCTAGGCAGGGACAAG
CGATGGTTTTTGCTGCTCTCTTACTGCTCTCTTTCACAAAGAACAGAAAA
AAAAAGTATAGGGTGCTCTCCAACTTCAGTACTACAATGGTACGTAATAT
ACGTTTTTATACTTGCACAGCACCGAGTGCTTTACTGGGGAACGTGGCCT
CGACCAAAACCATCTGTTGTACGTGTAACAACTGCTCTGTGAGTCGCAGC
AGCAGTTCAGTTGGAGGCAGACCCACGTCAAGCCTACTACCGTAATTCAA
TCTCTTCCCGCCGCCCGGCGCGCCTTGGGATGGTGTGAAGGTGTACATTT
TCTTGAGTAGATCTATTTAGAACTCTGTGGGCCATGTTGGTACCAACGTG
CGGAGTCTCGTGAGTACAAACAATTGACTGCATCGTGGCAGCGAGAGCGA
TTCCCGCTGCCAGCACCCTATCGTTTCCAGCTGTAACCTCCATCACCGAA
GGCTTGAGTTTGACTCAGAATCACTCGGGCTGTTGGCCCTAGTTTCTGTG
CTACGCGTCCGCGTGTATCGACTCGTTGCCTCTTCTCTCTTTCTGATTTT
TTCCACGCAGCACAGAAAAAAAAACTACTATATACTTGTGCTTCAAAGTA
CAGTTAGGTACGTGCGACCCCGGTACGTTTTATACATGCACAACTCCAAG
TGTTTGACTGGAAAACGTGGTCTCGAGGGGAAAAATCTGTTGTGCGAGTA
GGCGCTCTATGAGTCGCAGCAGCAGTTTAGTTGGAAGCAGACCTACGTAA
AGTCTACTCATTGGATCTCTTCTTGCGGCCCGACGCGCCTTGGTATATCG
TTAGATGGGCATTTTCTTGAGGAGAGGTTTTTAGAACTATGTGGGGTCTG
TTGGTACCAACGTGCGAGGTCTCTGGAGTACAAACAAATAACTGTATCGT
GGCAGCGACAGCGATACCTGCTGCCAGTACGCCATCGTTTCCAATCAATA
ACCTCCATCGCCGAAAGCTTGGAGTTTGACTCAGAATCACTCGGGCTGCT
GGCGCTACTCTCTGTGCTACGAGTCGGCGTGTGATCTGGTCATAGATTTG
CTCCACTGCAACAAGTATCAGAAGCCACAAATACCCTGGGCATAGCCAAA
AGCCTGACCATGTAACACAAAGACCGTTTTCCAGAGGCCCGATCTCTCTT
GAAAATGAGTGCCCATTTTCAAGAATCTGTCGACCTCGCCCGATTCTTGA
AAATCATATTCTTGAGAATGGGCCGATTTCAAGTCCATAAGATGGGATTT
TCTCTTGAAATCCGAAAATGGACCGATTTCAGATTTCAAGAATCCTGGAT
TTCGGTCCCATAAGACATGGTCTAAGGCCATCTTTTATGGGCATCGTATT
TGGGGTATGTCGGAATTGGATCTGGGAACTTGGGGACCTCTAATCCGATA
CGCCTATTTTATGGGGTAGTATTTGGCCAAATACGATAATCTCAAATCCT
ATATATTTTTTTTTCCCCTCGGCTCCATCGTATTTGGGACCCAAATACGA
TGGAGTCGAGGACAATCGTTTTTGCTGTTTTCGATTTGACTTGTAGGCGT
GTGCCTTTGAAAGTACGAAGTCTCCATCAAGCATAGCTGTAAACCAAGCA
CATGTTGAGCTCTCATCAAAGCAGAGAAGGCTGTCCTCGGCACACAGCAC
TTCAAGCATCTACACAACACGTCGGTCGATCTCATGGCGTCGGACGATCG
CGAGGACGCCTTCTGGGGAGCGCTCGCTGTAGCTCTCGTTGTGCTCTTGA
CCTACGAGAAACGGCGATGAGCCCGGACCTTGGCCGAGTAGGCTCTGATT
TTGGACGGGCTAGAGGACATAGTATACAGTATACATAGAGACGTCGAAGA
GGTAAGAGAGCGAGGATGGCGATGATTCCCGAGTCAAGCGTACTCGGCGA
TCCCACCCACGAACGGATTTCTCCAGATGGTCTAATGCTCAAAAAAACAG
AGCTGGAACAACGCGACTCCAGAGAGTACAGAAAGTTTCGCAGACATTTT
CGCATCCCGTACGAGATCTTGGAGCTTGTGCAGCTGGCAAAGCACCAAAA
GTGGTACTCATTGGCTGCGAGGGACGTGGCATGGAGACAGTGTCTACCTG
TAGTGCTGAAGGGCAGTCAAAGTTGTTGCTAATTCTGCTAAAAATGCGAT
GTGTATGATTTGGGTTCGAGATGACTCCAAGCACAGACACAACACCGTAC
TGTACTGTACTACAGTAGACTGTACTATACTGTAATACAGTAGACCATAC
TGGCCTGCTGTGCAGACAGTCCAGTACAAGACGTGTATTTGGTTTAAACC
TGAAGGACGAGTGTTGTGTTGTTGTAACCTATCGTCCTTCGCGAAATACA
GAGACTCAGCTACGATGGCGATGATCCCTCTATGTACGATAGTCCACTCT
CGAGTTGCCGTGCCGCTACCTGATGGCGAGGCGCGTGCGATGCATTTATG
TATTTTGAAAACAGACGGCTAGAAGATTGCACACACGCCGTTCAAATCGT
TGCAAACCTCCATGTCCCACAAAATAGACCTGTTGGATTTGGGCTCCGCA
ATTATACGATCCGCGAAAAGCACCAAATCCAATAATATTCCAGATCCAAA
TCCGATGCCCATAAAAGATGGCCTAATTAAGGGCGAGATTCATTGTATTT
CCAGGTCTTCCCTTGGCACTTTTATTTTATGCGCGGGCATTCATTGGTCG
AACTGACGGAGAATGATGACAGTGCTGCTAATATCATCGTACATAGTATG
TATACATATATGTACGGCTGCATTCATAGTATATGGTGTGTACCGATAAT
GAATGGACGCCGCCACGGAACTCGGGAGGAATCCCGTAAGCAAGCACTAG
ATTCAGCCTGGATTATGGAGATGAGCAAGCTGACGCGAGATGGGACTGCC
GAACCCGTCTCGCAAGACCAAATTCTCAGGCGCGAACGGGGACAGGGAAT
AATTCATTTTCCCTGTTCAGCTAGCTGACCACGAGCAGGATTGGCAAAAG
TTGCCCAGTTGTGATGGTCATACATATAAACATAGCTCTACAAACATCCC
GCTGTAGTTACACATTTATGCATATACAGCAGTGAACCGTGCACGAATGT
ACATGTCCCCAAATTTAAAATATACCTGGTATGCAAACAAATACAAACAG
CAGTACTCTACCAGTACGTATATACGTACTTACCACGGATGCATCTGCAA
GGATGCTTAATTTCCCTGTCGCTCTGCTATAAAGTAAGTGGTGACCGTAC
ATATTAGCTCTATCCATAGATACATGTCATCAGCAACAATAGTACCTGTC
TGTTGTACCAATAAACAGAGCCGAATATCAGGTGCCTGTGAAGCATACTA
AATTCTTTGTTTTTCCTTGTATGGATGTATTTAGCCTCACCAGACTACAG
TACAGTAGTTATGTCGATTTTGTGACGATTTGTACAGAACATCGAGTGTG
ATCTCTCCACGCAGATTTCAGAAATGAATAGCGCCAACTTTTGATGGTGC
CCAAGCTTTGACCATCTACAGAAGCGTAAAACGCCCAGGTATCTTTGTGC
GATGACCGTAATTGGTTCGCGAGTGTGTGCATCAAGCACGGTGTCTTCCA
GTCAAGGCGTTCGAAGAGGGTTGCCAGTTGCGCCGGACAGGCTTTCAACT
TCAACAAAAGAGACGATTTTTCCATCGTAGCTCGGTTTCGTGCGCTAATT
CCAGCGGCCATGTCTACCTATCTCCCACATACAATGCTGCTTGCAGTTTC
GTGAGCTCGGGGGCTTTGTGTACCGTGAGTGGGATGTATTTGATCGGCTG
AGGCAGGCTTTGGTTCACATCCTGACCACAAACGCTCTCGGCCGCCGTCC
TCGACCGTACTCGACGTACTCTCAACCGTTTCGGCGCGGACGAGAAATAG
AATCATCCGTATGAGCTGGTATACACGATTTACAAGAGTGCGGTCACCTA
ACTTGAGCACTCAACCGGTGCCTACCACTGTAGCGGACCCCAAACAATCA
GCAGATTCGGAGCAAATACGAGTGGCGACGATTGCACTCCACACAGAGCA
GGAAAAGACACGAAATCTTCAGGAAGCCCAGGTCTCTCAACGGCGAATAC
TTTCATTCCTTGCGGGTTAGCCATCTCCTCTTGTGGGCTGACCTCCATTT
CTGCCATAACTGCTACAACCCTTGAGAAGAACTGCAAATGACCTAAATGG
CGTCATTTCATTGAAGCAGGCATTCAACCGTATTTAAAAAAAAAAATGTA
ACCGACAATATTCTGGAGTATGTATGTGTATGTATGTATGTATGGTCATC
ACATATAGCAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGT
GGTCAGCTGAACAGGGAAGATGGATATTCCCCTGTCCCCGTGCGTGCCTG
AGAATTTGGTCTCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTCAGCCT
GCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTC
CCGAGTTCCGTGGCGACGTCCATTTATGAAACCGCCATACGCCATCGGGT
CAGTCCCAAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTG
CCGAGAGTCCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACG
GGTGCTGCCTTGGCAGATCACCATGGACCAATTAATATTCGCCTCTCTTT
CCCACAAAAGCAAAATACGGGGATCGGGGATCAATCGTGTATAGTGCAGC
CTTAACCCTCCACCTATATATATGCTTTGTATATTTATTACTCATGTGAC
AACAGTGGACCGCAGTGGTGGAGAAGCACATCAAAGGACTCCTCGACCAA
TTGTCCTTGGGGGCCCAGGACGACTTGCGAGGCGCGATCAAAGAGAGGCT
GATGGCAGCACGGGCGGGGGCAGAGAAGATCGGTGGGGACGGCGGCGGTG
GCAGACTGGTGGGCGAGGGCAATGAATCATCAGCAGGAGGGCTGGGGGAC
GGAGTTCTCGAGAAAAACCTTGGAGTACCTTTGGTGGTGGTGGGGTGCAA
GGCGGACTCGCTGCAGAGCGAAACGTTCGAGCAGCAGCAGAGGCTACACT
TCATTCAGCAGAGTCTACGCAGATTCTGCCTAAAATGTCAGTCGCAGGGT
TAGGAGGAGAGAGTGGGGCGGAAAACGACTGGTAGGTAATTAATCATCGC
AAGCACCCTTACTCACTTGAGGCATGCTTTTATGCGATCTCACGGGGCTG
GTCCGATCAGTGATGGATATTATCAGCTACAGCGACCGTACACGGCAGCG
TGTGCGACAACTTAGTAACCGCAGATGGAGCACTTAGCACCCCTATGACC
GGCTCCCGTTTGATCATGCGCGTGCGGCTCTTGTCCAACATGCGATTCAA
GACGGGGCGGCGCTGGTTTACACATCGGCGAAGGACGGCGTGAATTGCGG
CCTGCTCCGCCGATATCTGCTCAGCTGCCTCTACCCGGACGCCTTCCGAT
GCTCCGAGGAAGGACAGGTGCTTGCAAACACCGTTCGGTTCTTGGGAGGC
AGGCCCTGCATGGCACGACTCGGACAGTTAGTCGCATGTTTTTGCTTTCC
GAATTCCCCAACTTTCTAATACTCTCGAAACTCTGAATGGATCTTTTCGT
TTGAATAGACTATTTATTTTGTTTTATCACATCCGACCTGAACACCGTCT
GCACCCCCCCCCACCTTTCCCTCCCTCTATGATATCAAATGTTAGACATC
CGACGCGGCTTTCATCCCGGCAGGCTGGGACTCGAAACGATTGATAGACG
GTCTCCTGTCGCCAGAAAAGACTCCCTGGGGCCCGCAAGCGACTTTCTCG
GAGGTCGTGATACCGCCGCCCGAGGTCGCCAGGCGAGCGAGGGAGGGGAA
CAACGATGATTCTTGGGGAAACGGCGCCGCCGCGGCGGGCGAGGAGGAGG
CGGGAGAAGCGGTGGAACCCGAGGAAGCATGGCTTTCTAGCCTCTCAAAG
CAGGTTGCCGGATTGCGCTGGCAGAACGCGAAAAAGGCTGCGCTGAAGAC
CGCAAGCGAGTCCAAAGTGAGACAGAAATGCGTGGTCACTTTTTTGTTTA
AAGTGCCCTGATGATTTGTGTCCAGGGGTGAAACATTCGCGCAACTAGAG
AGAAGCATTCCGCTTGCAAGAGTGGTGACTGTTTTATCTCGAAGTCATTG
ACCGTGTAGCCCTCACACCCCGCCGCGGTCAAGACCCTAAGCGAAAAATA
CGATTTCGGATGAAGGAGCGCCAACAAGCCAGATCATAATCGTTGATATC
CGTCTGGGAGATCTTTGGTAAAAGCATGGCAACGCATGTCTAGAGCAAAG
AAGGCCGTGGTTTGGACGGTACGACAGACAACAAAGATTCAGTCCAAGAG
ACAAGAAAATCGGAGACAGACTGAAGGCGGGAGTAGATAGTTTTTCCTCC
CGAACAATACCGGACTTTCAGCTCGACCGTACACTCATGTGAGAGACAAA
ATATCCCGGCATGAAGAATGTGGGAGAGATCAGGCCTTTTTTTAGCATCC
CAGCAGTTTTCGTGCTTGCACCCCAGCCTCGGTATGATTTGACGGGTCCG
CCCGCTAGACGCCGCCGTGCGCGGCGTACCTCACCCCCCCCCTAATGCAT
GGCGTCGGTCGCTCTTGATGCTCTCCTTACCAGTCGCCGCGCGGAATCTC
TTCCAAGGACCCCGACCCTCGTAGCTTTTTCGCCAGCCTGCTGGCCAGCG
GGAGCGTCTCCTCCGTCGCGTCGCCACCGGTGAGCGGCGCTGCACTGCGC
TGACAGCTCTTGGTACGATTCATGTACATTTTGATCGTGAAAGAACATCC
GGGTTCTCTTGCGCTTGCTTTTTGGTGCGTGCTCTTTTTACGGATACACC
AACTACTGGTCTGATTTTTAGCTGGGTTCTTGAGAAAGTCTGGCTCGCCC
CCGCCGCCACAGTCAAAATGTGAGGTAATCCGTATCGTTTATTTCACTTG
AAGGTCAGCCGTGACGAAATCAACCGAACGATTGTGTTTTTGTTTGTGTT
TTTAGAACTTTCAAGTAACTTTTTTTTTACTCCTCTCCTTTCAAGTTACC
CCGCCTACAGCTTGCCGGAATGTTCGCGCGACGGGATCGCTCCGATCGTG
GACGTGTGAACGGTTTCCCGCTGCTGGGCCACTTATCTATGAAATGATCG
TATTTGCGGTGCTTTTACGCCGAAGCTTTATTTGCGGCGGCCTTTCCACA
CCTCCGCTTGTTTATGCCCCCCCCCCGCTTACGTCTGGCGAGACGCTCAG
AAAAAGAAGTGAGGATAGAAGAGCTCGGCGGGAAGCACCACCTTAACACC
GCCGATGTTCCTGGCAAGCTTGTGCAAGGTTTTTGTGGGCTAGAAGCTGT
TAAGGGCGCGGGAAGAAAGCACGGAAGTATCACAGCGGACAAGCCCGTGC
CCGATGACTGTAGTCCGATCTGTGCGCCTCAGGACCGTCCGTCGGCTGAG
AAGAGAAGGAAATATCGTGTGTGGAGGGGGATGGGCATTCGAACTGGGAG
GCGCGAGACTTGGAATCTGGCAGCTCCGGAATCGGAGGAAAGGGGGGCGA
GGGGGAGGTGGCAAGTTGATCGCGATAAGTAAAGTGGCTACAGTGCCCAA
TGCTGCGATTTCCCATAAGACTGATTGTTGATTGATCCATAGCTCTAATC
TTCCAAGAACCGGCGGGGTGCTAATGCGTGAAGGTCACAAGGCAGAGGTC
GACTCGAAAGGGCACCACCTGCTGAACTCACAGCTCTTGTGCAGCTACTG
GAATAGCTACGTCGTCCGTAGGGCCGGTCGGTCTTACAGGCAGTTAGTTC
CTTTAGAAATATTCCAAATTCTGGAAAACAAGGTAAAAACGTACAGTGGG
CTTGGGGTATGGAGTTGTTTTCAAGATCTCTACACCTTGAAAAACCACAG
GCAGGCGTTCTCTTACAAGTCATACCACCACCATCACCGATAAAAGCTGA
TCCGCGCCTCAGACAGAGGCTCTGACTCCAGCGGGACTCCATTTGCCTGA
CAGGCTCCAAGTTTCGGCCCACGACATGGACTGTGTGCTGGCGGGGTGTT
TTATCTGCTTCAGGATGCCTACCTCAAGAAAATGAAAACACGAGACTGGG
TTTTATCGTACGACCTCCAACCATACTGCTACGGAAAACGTTTGCTGTGG
GGGGTCACTGTGACTTCATGTCTTCGGGCATCGTTGAGAGCCATAGAAGA
TTAGTCCGCAGCGAGTCGCGGACAGCGGAATAGTGTGTAAGCTCCCCGGT
GGTGATTCCTACGGGGTGGAGCTTTTT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1112:185948..196474-

>mRNA_A-nodosum_M_contig1112.7.1 ID=mRNA_A-nodosum_M_contig1112.7.1|Name=mRNA_A-nodosum_M_contig1112.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1533bp|location=Sequence derived from alignment at A-nodosum_M_contig1112:185948..196474- (Ascophyllum nodosum dioecious)
ATGGCGGCTGCTTCGATATTAACGAGGTCTCATCAGCGTGGTATAGCTGA
AACGAAGGTGGCCGGCGCGACCAATTCAAACGTCGAAAACCTCTGGGAAA
CCATGCTCCGGGATGCTATGCGAAGAAACAGGCTCCCGGACGGGACCCTC
TTGCTCGTGGGCCCCCAGGGATGCGGCAAATCCGCTCTGCTTGATACGTT
CTTAGAAGAATATGCAGCAAGCGCTAATCCTTCTGGAGGGGCAGCCGCGG
CCGCCGCAGCCCCCGCCGTCGTTACACAGCTGGCAGAAAAGGGTCCGGAG
GGTGCCACCGGGGCTGCAGCAGCAGGGGCCGCCGCAACCTCAGCTGCCGG
CGTCGGTGGCGACAACACCAGCGCGGCAAACGCTAGAGGCTTCCACCCTG
TACTAGCGTACTCGTATCTAGATGCGACGGATCCTTCGGAACAGGGTTCG
GAACGTGATGACTCCCCCCCACGTGTTAGCGTCTGGTGTTGCAGCGAGCT
GGAGTTCCAAGGCCTGCTCCAGACGGTGTTACGGCCGGAACAACTCGCGA
ACACCACGGTGGCCGTTACCGTGGATCTGTCGCGACCGTGGGAGGCAATG
GACTCTTTGGAGAAGTGGACCGCAGTGGTGGAGAAGCACATCAAAGGACT
CCTCGACCAATTGTCCTTGGGGGCCCAGGACGACTTGCGAGGCGCGATCA
AAGAGAGGCTGATGGCAGCACGGGCGGGGGCAGAGAAGATCGGTGGGGAC
GGCGGCGGTGGCAGACTGGTGGGCGAGGGCAATGAATCATCAGCAGGAGG
GCTGGGGGACGGAGTTCTCGAGAAAAACCTTGGAGTACCTTTGGTGGTGG
TGGGGTGCAAGGCGGACTCGCTGCAGAGCGAAACGTTCGAGCAGCAGCAG
AGGCTACACTTCATTCAGCAGAGTCTACGCAGATTCTGCCTAAAATACGG
GGCGGCGCTGGTTTACACATCGGCGAAGGACGGCGTGAATTGCGGCCTGC
TCCGCCGATATCTGCTCAGCTGCCTCTACCCGGACGCCTTCCGATGCTCC
GAGGAAGGACAGACATCCGACGCGGCTTTCATCCCGGCAGGCTGGGACTC
GAAACGATTGATAGACGGTCTCCTGTCGCCAGAAAAGACTCCCTGGGGCC
CGCAAGCGACTTTCTCGGAGGTCGTGATACCGCCGCCCGAGGTCGCCAGG
CGAGCGAGGGAGGGGAACAACGATGATTCTTGGGGAAACGGCGCCGCCGC
GGCGGGCGAGGAGGAGGCGGGAGAAGCGGTGGAACCCGAGGAAGCATGGC
TTTCTAGCCTCTCAAAGCAGGTTGCCGGATTGCGCTGGCAGAACGCGAAA
AAGGCTGCGCTGAAGACCGCAAGCGAGTCCAAATCGCCGCGCGGAATCTC
TTCCAAGGACCCCGACCCTCGTAGCTTTTTCGCCAGCCTGCTGGCCAGCG
GGAGCGTCTCCTCCGTCGCGTCGCCACCGACGCTCAGAAAAAGAAGTGAG
GATAGAAGAGCTCGGCGGGAAGCACCACCTTAA
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