mRNA_A-nodosum_M_contig1108.5.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 247 bits (631), Expect = 4.080e-68 Identity = 206/689 (29.90%), Postives = 325/689 (47.17%), Query Frame = 1
Query: 7 GLGKGEDAGVVLDLLSRV-EHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRA-----DPVFIDSRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDFLGHKEELLDHLHD----WMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSGLPDLQQRLKECGNGSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLP---VVTTEKLSWVHWETLRLHWKHVQDSV--DLPAELKPEDPDFALESAMDLRERGGSLLKHP--QVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQP-EERWISEARKRLMSEGVLEARFARSLWKK-------DNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVK---EYMVLMRLPLKASCETMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQHYLAGVSDSKGRSPGDPIVP 1989
GLG+ EDA L L+ R+ + L NPW PP VV G+ +K+Y +++ A D + KVV +G + AGKTSL+ SI AG+G T+G ++ V ++ + + +V+ +D AGQV+Y G+HQ FLT RALY+LV + + + G ++L +HD W+ L+LRAP STV+L D + + FA++ E +++ ++ W E R + R L + + VS SGLP L + + +PP+W AL V+ ALR NP+ A R L +PLP V +++ + L W+ V D++ D+PA + + + ALE A+ + + G L+ +FLDV L+ L+ IL+HK+ QP E RW+ R L +G+L FA +W++ ++ ++ + +F VL+KLG+ LP+ T + V + +V+MRL + F+ V KW+FD+ YGL+ERL+ASCH +G V CWR GA F H + G ++ T + + FG D VW A+R+V S+ L +E+P + W W++C KH Q + + V G DP++P
Sbjct: 8 GLGETEDA---LRLVERLGDSLYLHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQ---DTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHG-VDDLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSI--DKFAETA-------------ERIQRRVRELVAVW-HEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQA-ATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPAAMI-SNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKN------------QPFENRWLW-MRDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHD--MRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVG----DPLLP 652
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 245 bits (626), Expect = 1.390e-66 Identity = 211/663 (31.83%), Postives = 316/663 (47.66%), Query Frame = 1
Query: 73 LGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-----KVVFIGCSGAGKTSLIKSIKAGKGQLTQGE--ELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDFLGHKEELLDH-----LHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSGLPDLQQRLKECGNGSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEK---LSWVHWETLRLHWKHVQDSVDLPAELKPE-------DPDFALESAMDLRERGGSLLK--HPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEARKRLMSEGVLEARFARSLWKKD-NIDMPQQIFV----VLVKLGILLPLIPPRYTWDV--SLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLRE--EWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQHYLAGVSDSKG 1962
LG NPW PP VV KG+ ++ Y ++++A+ + + KVV +G S AGKTSL+ SI G+G T G E+ +VG+ + H + G A V+ YD AGQV+YYG+HQ FLT RALY+LVW+ G ++ LD + W+ LHLRAP STV+L D + + F + A VE+ + ++W++ RM + V R LVS GL ++ R+ + + +PP+W AL LDALRD +P +A R L P V ++ S+ +L WK V +V+ EL+ + DPD A+E A+ + E G +L+ + VFLDV L+ L IL+HK+ + P HF+ R L+ G+L FA LW I +P+++ V+V LG+ LPL P +L T P ++ +V+MRLP E +++R + V W+FD YGLVER++ASCHA+G V M CWR GA F ++ + GS L + R + L+++ FG VW ALR+V SS + +++P + WE W +C + H ++ S G
Sbjct: 181 LGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQ----GTA-VEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIED--FTGTAAV-------------VEERVAVLRKEWRKARGFSSTRMDM---DMTVLERSSLVSC-----LDGVGLQEMIDRIA-AQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLGSR-PKVGADREPGRSFFTENSLVEQWKGVVQNVE--GELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQ-HFAG-----------MRNELVHNGILRIAFAEHLWSDVMEITVPEEVLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNISRQDMLVIMRLPETCGAEHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSR--AMATSDGSDRLYTFVVRYDSAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIG 797
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 238 bits (607), Expect = 1.880e-63 Identity = 210/672 (31.25%), Postives = 312/672 (46.43%), Query Frame = 1
Query: 4 SGLGKGEDAGVVLDLLSRV---EHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-----KVVFIGCSGAGKTSLIKSIKAGKGQLTQG--EELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDFLGHKEELLDH-----LHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSGLPDLQQRLKECGNGSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLSWVHWETLRLHW----KHVQDSVDLPAE-LKPEDPDFALESAMDLRERGGSLLK--HPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFV-----VLVKLGILLPLIPPRYTWDVSLGTMSPWEHV--KEYMVLMRLPLKASCETMACFNAFEKLR---EEWG---VVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
S LG+ E A + L ++ ++ L +NPW PP +V++G+ ++KY +++ A+ + + KVV IG GAGKTSL+ SI +G T G EE+ +VG+ ++ H G V+ YD AGQV+YYG+HQ FLT RALY+LVW+ S G + LD + W+ LHLR P S VLL D L + VE S + + ++W + + P +T L + ++ LVS GL ++ R+ G S ++PPSW AL LDALRD +P A RR+L + V + S++ TL W K V + PAE + D A+E A+ + E G +L+ H V+FLDV L+ L IL+HK+ P + ++ + L+ GVL +FA LW + P + + VL LG+ LPL ++ + + ++ +V+MRLP +CE E +R E G V KW+FD ++GLVER++ASCH +G+V CWR GA F + + + GG L + R LAV FG +W ALR+V SS +P + WE C H
Sbjct: 316 SALGQAEQALQFVARLGQLASGQNLRLQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNG----RIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGA---------------VESSARRQLQEW--QGNRKSPGVTK----LTILQQPSLVSCD-----DGGGLSEVIARVDAQGATSI-VVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTA-----------MKDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGREERHTASAIDPAAAHGQIGRQDMLVIMRLP--DTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADD--GGLNWLYSFVIRYDEEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIH 941
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 175 bits (444), Expect = 3.340e-42 Identity = 200/683 (29.28%), Postives = 299/683 (43.78%), Query Frame = 1
Query: 34 VVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDEL--KRADPVFIDSRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDF------LGHKEELLDHLH--------DWMTTLHLRAPRSTVLLCGTHKDKCL------ANNLFAKSMAWLRR--SPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWP------YSKSGLPDLQQRL--KECGN--GSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLSWVHWET----------LRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFS----SERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLREEWGVVA-KWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLT--RCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQ 1929
+L LSR+ F + NPW+ PP VVSKGI +++Y+ +L + PV KVV +G GAGKTSL +S++ G+ T G E +V + V+ + V G +++YD AGQV Y GL Q+FL+ RA+ +LV + F L H ++L L DW+ +L R P S V++ T D A + WL + A+ + S+ + + P + +GG + +R S TW S P L R+ GN G+ ++P SW AL VLDAL G NPVE+ ++ + P TE + V+ L W V +++ + PD ALE A+ +RE GSL++H VFLDV LA L +LNH+ E P S E++ I+ + RL GVLE AR LW + + L LG+ PL + + +VL+RL K + + F R+ V++ KWK G G +E+++ C +G + T WR G G A +FAL V+ + +C + ++ +GS A W AL F IS + EFP L W A ++CP+H +Q
Sbjct: 233 ALLATLSRLG-FLVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVE----QMDVNG-VTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTDAAGRIEGAIGEWLESWSGAGMNAVHVEDGVSLTSCF-----------PPTPNEDGGAALGKRKSPDEDS-TWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGG-PKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDG-VSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHR-DDEDPLRGDVSLGDTGITLKEDKHIA-SWNRLKGHGVLEPSLARVLWPDG---LSNYVLPALDSLGLTYPLDD---------------DPAEGLVVLLRLDEKRPEDVGKELDDFR--RDHTAVLSVKWKVFLGVPP-GAIEKMLTRCCRLGT--LRTFWRFGVLVQGSLGG-GIAARTFALVVEYSHDKC---------EVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQDMQ 860
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 174 bits (440), Expect = 1.040e-41 Identity = 206/686 (30.03%), Postives = 294/686 (42.86%), Query Frame = 1
Query: 37 VLDLLSRVEH---FDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFID--SRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDFLGH----------KEEL--LDHLH--DWMTTLHLRAPRSTVLLCGTHKDKCLAN------NLFAKSMAWL-----------RRSPSV-------EAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSG--LPDLQQRL--KECGNGSR---WLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTE--KLSWVHW---ETLRLHWKHVQDSVDLPA-ELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQP----EERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
+LD+L R E +L +NPW PP +V+KG ++ Y+++L A+P + S K++ +G GAGKTSL KS+KA + T GE E V R E +EG + +++YD AGQV Y GL Q+FLT RA+ V+V NA F KE+ L+ L DW+ ++ R P + V+L T D N + S WL R P V + ED E+S +N+ + GG + W K P L RL K G G R +IP SW AL VL+AL G +PVE V L D T K H E LR W+ +V L ++ + D ALE A+ +RE GSL++H VFLDV LA L +LNHK + + E+ + RL +EGVLE R AR LW + + + + LG+ PL V L + EH + +V C + LR A WK G A G +E+++ C ++G V T WR G G + +G FA+ ++ + P+ L Q FG A W AL +V+S+ + +FP L ++CP+H
Sbjct: 283 LLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLY-AEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPT-GEWKEESTVFADVERME--LEGSS-IRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQ----------------AMEGGWTCD-----------WRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEA--AVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNG---LSEYVIPTIASLGLTFPLENDPAGGLVVLLRL---EHDRPELV-------GKVIDTFCLDQTPALR------ASWKIFLGVPA-GAIEKVLTRCCSLGGV--QTFWRSGVLVHGGVGEQDRSG-IFAVVLEYS-------PSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQH 904
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 167 bits (423), Expect = 1.160e-39 Identity = 198/680 (29.12%), Postives = 290/680 (42.65%), Query Frame = 1
Query: 37 VLDLLSRVEH-----FDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR--KVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDF-----------LGHKEELLDHLH--DWMTTLHLRAPRSTVLLCGTHKDKCLAN--NLFAKS--------MAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSGLPDLQQRL--KECGNGSR---WLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKL-------SWVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEAR------------KRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
+LD+L ++ LG NPW PP P+V KG ++ Y+++L A+P I KVV +G GAGKTSL +S+KA + T GE E V E +EG + V++YD AGQV Y GL Q+FLT RA+ VLV NA F +G L+ L DW+ ++ R P + V+L T D N + A+ +W+R ++ + + S+ + +E E GG + R + +P+ P L RL K G G R ++P SW AL VL+AL G +PVE V R K DP TE + E L + W+ D ++ + + ALE A+ +RE GSL+++ + +FLDV LA L +LNHK + +AR RL S+GVLE R A ++W + + + L LG+ PL + K +VL+RL + F L + A WK G G +E+++ C +G V T WR G G ++ G AV L +T N+ LA Q FG A W L +V+S+ + +FP L W + CP+H
Sbjct: 138 LLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLY-AEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPT-GEWKEESTVFADVEAME--LEGSS-VRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWVRNG--LQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWR-DMADGNPS--------PSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLR--KSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSG-VTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGD--------TGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNG---LSEYVLPALAFLGLTFPLED---------------DPAKGLVVLLRLKPDRPESVGHAIDTF-CLDHTPALSASWKIFLGVPP-GAIEKVLTRCCGLGGV--RTFWRYGVLVHGGLGEVHV-GRRGIFAVVLEYSSTDNE-----LAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQH 762
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.530e-37 Identity = 192/680 (28.24%), Postives = 297/680 (43.68%), Query Frame = 1
Query: 34 VVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDEL--KRADPVFIDSRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDF------LGHKEELLDHLH--------DWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMA--------WLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKS------GLPDLQQRL----KECGNGSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLK----PEDPLPVVTT-----EKLSWVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFS----SERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLREEWGVVA-KWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQ 1929
+L LS++ + NPW+ PP VVSKGI +++Y+ +L + PV KV+ +G GAGKTSL +S++ G+ T G E +V + V+ + V G +++YD AGQV Y GL Q+FL+ RA+ +LV + F L ++L L+ DW+ +L R P S V++ T D LA + A + A W+ + VE + N + P + +GG + R S TW S P L R+ K G+ ++P SW L VLDAL G +PVE+ ++ + P+ VV + + + L W V +++ + +PD ALE A+ +RE GSL++H VFLDV LA L +LNH+ E P S E++ I+ + RL GVLE A LW + + L LG+ PL + + +VL+RL K + + F R+ V++ KWK G G +E+++ C +G + T WR G G AA +FAL ++ + + ++ +GS A W AL + IS + EFP L W A ++CP+H +Q
Sbjct: 197 ALLATLSQLG-LHVHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVE----QMDVNG-VTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCD--LAAGMAADAAARMAGGAGNWIESWSDAQMTAVRVEDGV-NLTSCFASTP--------NEDGGAALGTRESPEEQS-TWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVAALEEDG-VSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHR-DDEDPLRGDVSLGDTGITLKEDKHIA-SWNRLKGHGVLEPELAGVLWPDG---LSNYVLPTLDSLGLTYPLDD---------------DPAEGLVVLLRLDEKRPEDVGKELDDFR--RDHTAVLSVKWKIFLGVPP-GAIEKMLTRCCRLGT--LRTFWRFGVLVQGSLGGGMAAK-TFALLIEYSHDTC-------EVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQDMQ 824
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 146 bits (369), Expect = 8.770e-33 Identity = 180/656 (27.44%), Postives = 275/656 (41.92%), Query Frame = 1
Query: 25 DAGVVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-KVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELES-VGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNA---SDFLGHKEELLDHLHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVS--------SSPT------WPYSKSGLPDLQQRLKECGNGSRWL---IPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLS--WVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEAR-KRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLRE-EWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
D +LD + DL NPWE PP +V+ G+ ++ YYD + + + KVV IG GKTSL +SI G +TQ +ES V V V+ H+ V+G ++++D AGQV YYGL QLFLT RA+Y+LVW+A S+ G E L + W+ L R P + V+L G D+ + + +DVE + + W + QP GL +E + LVS S+P WP KS + + + + R + +PPS+ AL +L+ L + RR K E +T L W H + L+ + P+ A+ A+ +R+ G L+++ VFLDVE A L + +H+ + R + A +RL +E V E + A LW + + + + L G+ PL P + ++L+R+ E K E + + F G G VERL+A C +G WR GA VG+ A G F+L+V+ + + LA++ FG + W AL V+S ++ EFP L E CP+H
Sbjct: 487 DLARLLDRFDGLVTLDLSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHK----VDGHP-IRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA-IAPWLRYLTFRVPDANVILVGNKWDRVVRTR---------------GTVADDVECESRRWLKSWMEKAHGHQPH------GLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEEL------ASSSRR--KAEQRTRGITRADLEEKW-HAKVAELNGAGTPVAA----------PEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDS-------YGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPE---LAPHLLLALKSAGLTFPL---------------PNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPP-GFVERLLARCCHMGYPF--PFWRYGALIVGN----GAEKGLFSLSVEYSEEDKI-------LALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQH 1057
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.930e-31 Identity = 176/656 (26.83%), Postives = 276/656 (42.07%), Query Frame = 1
Query: 25 DAGVVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-KVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELES-VGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNA---SDFLGHKEELLDHLHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVS--------SSPT------WPYSKSGLPDLQQRLKECGNGSRWL---IPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLS--WVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEAR-KRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCE-TMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
D +LD+ + DL NPWE PP +V+ G+ ++ YY+ + + + KVV IG GKTSL +SI G +TQ +ES V V V+ H+ V+G ++++D AGQV YYGL QLFLT RA+Y+LVW+A S+ G E L + W+ L R P + V+L G D+ + + +DVE + + W + QP GL +E + LVS S+P WP KS + + + + R + +PPS+ AL +L+ L + RR K E +T L W H + L+ + P+ A+ A+ +R+ G L+++ VFLDVE A L + +H+ + R + A +RL +E V E + A LW + + + + L G+ PL P + ++L+R+ E ++ A + + + + F G G VERL+A C +G WR GA VG+ A G F+L++ + + K V+ G + W AL V+S ++ EFP L E CP+H
Sbjct: 394 DLARLLDVFDGLRSLDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHK----VDGHP-IRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA-IAPWLRYLTFRVPNANVILVGNKWDRVVRTR---------------GTVADDVECESRRWLKSWMEKAHGHQPH------GLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEEL------ASSSRR--KAEQRTRGITRADLEEKW-HAKVAELNGAGTPVAA----------PEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDS-------YGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPE---LAPHLLLALKSAGLTFPL---------------PNDPNGGLVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPP-GFVERLLARCCHLGYPY--PFWRYGALIVGN----GAEKGLFSLSLDYSEHDNMLK-------VEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQH 964
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.350e-30 Identity = 178/650 (27.38%), Postives = 273/650 (42.00%), Query Frame = 1
Query: 37 VLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-KVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELES-VGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNA---SDFLGHKEELLDHLHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPT--------------WPYSKSGLPDLQQRL-KECGNGSRWL---IPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLSWVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLRE-EWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
+LD L R+ + NPWE PP +V GI ++ Y++ + + KVV +G GKTSL +SIK GK +T+G ES V V V+ H ++G ++++D AGQV YYGL QLFLT RA+Y+LVW+A S+ G E L + W+ L R P ++V+L G D+ + RR+ A+ DVE + E W R QPR G+ +E + LVS + + WP KS P L R+ + + +R + +P S+ AL +L+ L K E +T L W+ SV P D A+ A+ +R+ G L+++ VFLDVE A L + HK ++ + ++ RL E VLE + A LW + + + L G+ PL + D + G + +L+R+ K + ++ + + +V + F G G VERL+A C +G + WR GA VG A F+L+++ + + L V+ G W AL V+S ++ EFP L CP H
Sbjct: 326 LLDSLERIYRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDH----DLDGHP-IRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLA-IAPWLRHLTFRVPDASVILVGNKCDRVVRT----------RRT----AVAVDVEHESRQWLESWIEIARGHQPR------GISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKS-TPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRS--------KTEQQTRGITRAILE-EKWQAKVAEMNRAGTSVAAP--------DAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRD------SYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPV---LAPHLLLALKSAGLTFPL-----SNDSNGGLV----------ILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPP-GFVERLLARCCHLG--LPYPFWRYGALIVGKGAEERM----FSLSLEYSEARKI-------LTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLH 893 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1108.5.1 >prot_A-nodosum_M_contig1108.5.1 ID=prot_A-nodosum_M_contig1108.5.1|Name=mRNA_A-nodosum_M_contig1108.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=663bp MSGLGKGEDAGVVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDback to top mRNA from alignment at A-nodosum_M_contig1108:109653..113943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1108.5.1 ID=mRNA_A-nodosum_M_contig1108.5.1|Name=mRNA_A-nodosum_M_contig1108.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4291bp|location=Sequence derived from alignment at A-nodosum_M_contig1108:109653..113943- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1108:109653..113943- >mRNA_A-nodosum_M_contig1108.5.1 ID=mRNA_A-nodosum_M_contig1108.5.1|Name=mRNA_A-nodosum_M_contig1108.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1989bp|location=Sequence derived from alignment at A-nodosum_M_contig1108:109653..113943- (Ascophyllum nodosum dioecious)back to top |