mRNA_A-nodosum_M_contig1108.5.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1108.5.1
Unique NamemRNA_A-nodosum_M_contig1108.5.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 4.080e-68
Identity = 206/689 (29.90%), Postives = 325/689 (47.17%), Query Frame = 1
Query:    7 GLGKGEDAGVVLDLLSRV-EHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRA-----DPVFIDSRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDFLGHKEELLDHLHD----WMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSGLPDLQQRLKECGNGSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLP---VVTTEKLSWVHWETLRLHWKHVQDSV--DLPAELKPEDPDFALESAMDLRERGGSLLKHP--QVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQP-EERWISEARKRLMSEGVLEARFARSLWKK-------DNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVK---EYMVLMRLPLKASCETMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQHYLAGVSDSKGRSPGDPIVP 1989
            GLG+ EDA   L L+ R+ +   L  NPW  PP  VV  G+  +K+Y  +++ A     D   +   KVV +G + AGKTSL+ SI AG+G  T+G   ++  V ++    +     + +V+ +D AGQV+Y G+HQ FLT RALY+LV + + + G  ++L   +HD    W+  L+LRAP STV+L     D  +  + FA++              E +++ ++     W  E R  + R       L +   +  VS         SGLP L   +      +   +PP+W  AL V+ ALR   NP+ A R  L   +PLP   V      +++  + L   W+ V D++  D+PA +   + + ALE A+ + +  G  L+      +FLDV  L+  L+ IL+HK+              QP E RW+   R  L  +G+L   FA  +W++       ++ ++ + +F VL+KLG+ LP+            T +    V    + +V+MRL    +      F+          V  KW+FD+    YGL+ERL+ASCH +G V    CWR GA F  H   +    G      ++    T    +      + FG  D   VW A+R+V S+   L +E+P + W  W++C KH  Q  +  + V    G    DP++P
Sbjct:    8 GLGETEDA---LRLVERLGDSLYLHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQ---DTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHG-VDDLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSI--DKFAETA-------------ERIQRRVRELVAVW-HEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQA-ATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPAAMI-SNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKN------------QPFENRWLW-MRDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHD--MRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVG----DPLLP 652          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 1.390e-66
Identity = 211/663 (31.83%), Postives = 316/663 (47.66%), Query Frame = 1
Query:   73 LGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-----KVVFIGCSGAGKTSLIKSIKAGKGQLTQGE--ELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDFLGHKEELLDH-----LHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSGLPDLQQRLKECGNGSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEK---LSWVHWETLRLHWKHVQDSVDLPAELKPE-------DPDFALESAMDLRERGGSLLK--HPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEARKRLMSEGVLEARFARSLWKKD-NIDMPQQIFV----VLVKLGILLPLIPPRYTWDV--SLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLRE--EWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQHYLAGVSDSKG 1962
            LG NPW  PP  VV KG+  ++ Y  ++++A+    + +     KVV +G S AGKTSL+ SI  G+G  T G   E+ +VG+ +  H  +    G A V+ YD AGQV+YYG+HQ FLT RALY+LVW+     G  ++ LD      +  W+  LHLRAP STV+L     D  + +  F  + A              VE+ +    ++W++       RM      + V  R  LVS          GL ++  R+    + +   +PP+W  AL  LDALRD  +P +A R  L      P V  ++    S+    +L   WK V  +V+   EL+ +       DPD A+E A+ + E  G +L+  +   VFLDV  L+  L  IL+HK+  +  P  HF+             R  L+  G+L   FA  LW     I +P+++      V+V LG+ LPL P         +L T  P    ++ +V+MRLP     E        +++R   +  V   W+FD     YGLVER++ASCHA+G V M  CWR GA F     ++  + GS  L   + R  +        L+++ FG      VW ALR+V SS   + +++P + WE W +C + H    ++      S G
Sbjct:  181 LGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQ----GTA-VEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIED--FTGTAAV-------------VEERVAVLRKEWRKARGFSSTRMDM---DMTVLERSSLVSC-----LDGVGLQEMIDRIA-AQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLGSR-PKVGADREPGRSFFTENSLVEQWKGVVQNVE--GELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQ-HFAG-----------MRNELVHNGILRIAFAEHLWSDVMEITVPEEVLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNISRQDMLVIMRLPETCGAEHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSR--AMATSDGSDRLYTFVVRYDSAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIG 797          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.880e-63
Identity = 210/672 (31.25%), Postives = 312/672 (46.43%), Query Frame = 1
Query:    4 SGLGKGEDAGVVLDLLSRV---EHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-----KVVFIGCSGAGKTSLIKSIKAGKGQLTQG--EELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDFLGHKEELLDH-----LHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSGLPDLQQRLKECGNGSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLSWVHWETLRLHW----KHVQDSVDLPAE-LKPEDPDFALESAMDLRERGGSLLK--HPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFV-----VLVKLGILLPLIPPRYTWDVSLGTMSPWEHV--KEYMVLMRLPLKASCETMACFNAFEKLR---EEWG---VVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
            S LG+ E A   +  L ++   ++  L +NPW  PP  +V++G+  ++KY  +++ A+    + +     KVV IG  GAGKTSL+ SI   +G  T G  EE+ +VG+ ++ H    G      V+ YD AGQV+YYG+HQ FLT RALY+LVW+ S   G +   LD      +  W+  LHLR P S VLL     D  L   +                    VE S + + ++W  +   + P +T     L + ++  LVS          GL ++  R+   G  S  ++PPSW  AL  LDALRD  +P  A RR+L  +    V   +  S++   TL   W    K V   +  PAE +   D   A+E A+ + E  G +L+  H  V+FLDV  L+  L  IL+HK+     P +  ++            +  L+  GVL  +FA  LW  +    P +  +     VL  LG+ LPL         ++   +    +  ++ +V+MRLP   +CE        E +R   E  G   V  KW+FD    ++GLVER++ASCH +G+V    CWR GA F  +  + +  GG   L   + R           LAV  FG      +W ALR+V SS       +P + WE    C  H
Sbjct:  316 SALGQAEQALQFVARLGQLASGQNLRLQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNG----RIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGA---------------VESSARRQLQEW--QGNRKSPGVTK----LTILQQPSLVSCD-----DGGGLSEVIARVDAQGATSI-VVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTA-----------MKDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGREERHTASAIDPAAAHGQIGRQDMLVIMRLP--DTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADD--GGLNWLYSFVIRYDEEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIH 941          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 3.340e-42
Identity = 200/683 (29.28%), Postives = 299/683 (43.78%), Query Frame = 1
Query:   34 VVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDEL--KRADPVFIDSRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDF------LGHKEELLDHLH--------DWMTTLHLRAPRSTVLLCGTHKDKCL------ANNLFAKSMAWLRR--SPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWP------YSKSGLPDLQQRL--KECGN--GSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLSWVHWET----------LRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFS----SERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLREEWGVVA-KWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLT--RCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQ 1929
             +L  LSR+  F +  NPW+ PP  VVSKGI  +++Y+ +L  +   PV     KVV +G  GAGKTSL +S++ G+   T G E  +V + V+    +  V G   +++YD AGQV Y GL Q+FL+ RA+ +LV +   F      L H ++L   L         DW+ +L  R P S V++  T  D         A  +      WL       + A+  +   S+ + +           P   + +GG  + +R      S TW        S    P L  R+     GN  G+  ++P SW  AL VLDAL  G NPVE+ ++ +      P   TE +  V+             L   W  V  +++    +    PD ALE A+ +RE  GSL++H   VFLDV  LA  L  +LNH+   E P     S         E++ I+ +  RL   GVLE   AR LW      +   +   L  LG+  PL                 +  +  +VL+RL  K   +     + F   R+   V++ KWK   G    G +E+++  C  +G   + T WR G    G       A  +FAL V+ +  +C          + ++ +GS    A W AL F IS    +  EFP L W A ++CP+H   +Q
Sbjct:  233 ALLATLSRLG-FLVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVE----QMDVNG-VTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTDAAGRIEGAIGEWLESWSGAGMNAVHVEDGVSLTSCF-----------PPTPNEDGGAALGKRKSPDEDS-TWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGG-PKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDG-VSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHR-DDEDPLRGDVSLGDTGITLKEDKHIA-SWNRLKGHGVLEPSLARVLWPDG---LSNYVLPALDSLGLTYPLDD---------------DPAEGLVVLLRLDEKRPEDVGKELDDFR--RDHTAVLSVKWKVFLGVPP-GAIEKMLTRCCRLGT--LRTFWRFGVLVQGSLGG-GIAARTFALVVEYSHDKC---------EVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQDMQ 860          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.040e-41
Identity = 206/686 (30.03%), Postives = 294/686 (42.86%), Query Frame = 1
Query:   37 VLDLLSRVEH---FDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFID--SRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDFLGH----------KEEL--LDHLH--DWMTTLHLRAPRSTVLLCGTHKDKCLAN------NLFAKSMAWL-----------RRSPSV-------EAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSG--LPDLQQRL--KECGNGSR---WLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTE--KLSWVHW---ETLRLHWKHVQDSVDLPA-ELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQP----EERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
            +LD+L R E     +L +NPW  PP  +V+KG   ++ Y+++L  A+P  +   S K++ +G  GAGKTSL KS+KA +   T GE  E   V     R E  +EG + +++YD AGQV Y GL Q+FLT RA+ V+V NA  F             KE+   L+ L   DW+ ++  R P + V+L  T  D    N       +   S  WL           R  P V         + ED E+S +N+                +  GG   +           W   K     P L  RL  K  G G R    +IP SW  AL VL+AL  G +PVE V   L   D      T   K    H    E LR  W+    +V L   ++   + D ALE A+ +RE  GSL++H   VFLDV  LA  L  +LNHK  +      +           E+     +  RL +EGVLE R AR LW      + + +   +  LG+  PL        V L  +   EH +  +V              C +    LR      A WK   G  A G +E+++  C ++G V   T WR G    G     + +G  FA+ ++ +       P+   L  Q FG     A W AL +V+S+   +  +FP L     ++CP+H
Sbjct:  283 LLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLY-AEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPT-GEWKEESTVFADVERME--LEGSS-IRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQ----------------AMEGGWTCD-----------WRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEA--AVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNG---LSEYVIPTIASLGLTFPLENDPAGGLVVLLRL---EHDRPELV-------GKVIDTFCLDQTPALR------ASWKIFLGVPA-GAIEKVLTRCCSLGGV--QTFWRSGVLVHGGVGEQDRSG-IFAVVLEYS-------PSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQH 904          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.160e-39
Identity = 198/680 (29.12%), Postives = 290/680 (42.65%), Query Frame = 1
Query:   37 VLDLLSRVEH-----FDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR--KVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDF-----------LGHKEELLDHLH--DWMTTLHLRAPRSTVLLCGTHKDKCLAN--NLFAKS--------MAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKSGLPDLQQRL--KECGNGSR---WLIPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKL-------SWVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEAR------------KRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
            +LD+L  ++        LG NPW  PP P+V KG   ++ Y+++L  A+P  I     KVV +G  GAGKTSL +S+KA +   T GE  E   V       E  +EG + V++YD AGQV Y GL Q+FLT RA+ VLV NA  F           +G     L+ L   DW+ ++  R P + V+L  T  D    N   + A+          +W+R    ++ +  +   S+ + +E    E            GG   + R  +   +P+        P L  RL  K  G G R    ++P SW  AL VL+AL  G +PVE V R  K  DP     TE           +  E L + W+   D ++    +   +   ALE A+ +RE  GSL+++ + +FLDV  LA  L  +LNHK  +                    +AR             RL S+GVLE R A ++W      + + +   L  LG+  PL                 +  K  +VL+RL            + F  L     + A WK   G    G +E+++  C  +G V   T WR G    G    ++  G     AV L   +T N+     LA Q FG     A W  L +V+S+   +  +FP L W   + CP+H
Sbjct:  138 LLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLY-AEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPT-GEWKEESTVFADVEAME--LEGSS-VRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWVRNG--LQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWR-DMADGNPS--------PSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLR--KSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSG-VTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGD--------TGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNG---LSEYVLPALAFLGLTFPLED---------------DPAKGLVVLLRLKPDRPESVGHAIDTF-CLDHTPALSASWKIFLGVPP-GAIEKVLTRCCGLGGV--RTFWRYGVLVHGGLGEVHV-GRRGIFAVVLEYSSTDNE-----LAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQH 762          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.530e-37
Identity = 192/680 (28.24%), Postives = 297/680 (43.68%), Query Frame = 1
Query:   34 VVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDEL--KRADPVFIDSRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASDF------LGHKEELLDHLH--------DWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMA--------WLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPTWPYSKS------GLPDLQQRL----KECGNGSRWLIPPSWCHALIVLDALRDGVNPVEAVRRYLK----PEDPLPVVTT-----EKLSWVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFS----SERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLREEWGVVA-KWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQ 1929
             +L  LS++    +  NPW+ PP  VVSKGI  +++Y+ +L  +   PV     KV+ +G  GAGKTSL +S++ G+   T G E  +V + V+    +  V G   +++YD AGQV Y GL Q+FL+ RA+ +LV +   F      L   ++L   L+        DW+ +L  R P S V++  T  D  LA  + A + A        W+      +     VE  + N    +   P        + +GG  +  R      S TW    S        P L  R+    K    G+  ++P SW   L VLDAL  G +PVE+ ++ +     P+    VV       + +  +    L   W  V  +++    +   +PD ALE A+ +RE  GSL++H   VFLDV  LA  L  +LNH+   E P     S         E++ I+ +  RL   GVLE   A  LW      +   +   L  LG+  PL                 +  +  +VL+RL  K   +     + F   R+   V++ KWK   G    G +E+++  C  +G   + T WR G    G      AA  +FAL ++ +            + ++ +GS    A W AL + IS    +  EFP L W A ++CP+H   +Q
Sbjct:  197 ALLATLSQLG-LHVHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVE----QMDVNG-VTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCD--LAAGMAADAAARMAGGAGNWIESWSDAQMTAVRVEDGV-NLTSCFASTP--------NEDGGAALGTRESPEEQS-TWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVAALEEDG-VSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHR-DDEDPLRGDVSLGDTGITLKEDKHIA-SWNRLKGHGVLEPELAGVLWPDG---LSNYVLPTLDSLGLTYPLDD---------------DPAEGLVVLLRLDEKRPEDVGKELDDFR--RDHTAVLSVKWKIFLGVPP-GAIEKMLTRCCRLGT--LRTFWRFGVLVQGSLGGGMAAK-TFALLIEYSHDTC-------EVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQDMQ 824          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 8.770e-33
Identity = 180/656 (27.44%), Postives = 275/656 (41.92%), Query Frame = 1
Query:   25 DAGVVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-KVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELES-VGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNA---SDFLGHKEELLDHLHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVS--------SSPT------WPYSKSGLPDLQQRLKECGNGSRWL---IPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLS--WVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEAR-KRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLRE-EWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
            D   +LD    +   DL  NPWE PP  +V+ G+  ++ YYD + +     +    KVV IG    GKTSL +SI  G   +TQ   +ES V V V+ H+    V+G   ++++D AGQV YYGL QLFLT RA+Y+LVW+A   S+  G   E L  +  W+  L  R P + V+L G   D+ +                    + +DVE   +   + W  +    QP       GL +E  + LVS        S+P       WP  KS      + + +  +  R +   +PPS+  AL +L+ L        + RR  K E     +T   L   W H +   L+      +           P+ A+  A+ +R+  G L+++   VFLDVE  A  L  + +H+          +        R  + A  +RL +E V E + A  LW  +   +   + + L   G+  PL               P +     ++L+R+      E         K  E +  +     F  G    G VERL+A C  +G       WR GA  VG+     A  G F+L+V+ +    +       LA++ FG  +    W AL  V+S   ++  EFP L  E    CP+H
Sbjct:  487 DLARLLDRFDGLVTLDLSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHK----VDGHP-IRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA-IAPWLRYLTFRVPDANVILVGNKWDRVVRTR---------------GTVADDVECESRRWLKSWMEKAHGHQPH------GLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEEL------ASSSRR--KAEQRTRGITRADLEEKW-HAKVAELNGAGTPVAA----------PEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDS-------YGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPE---LAPHLLLALKSAGLTFPL---------------PNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPP-GFVERLLARCCHMGYPF--PFWRYGALIVGN----GAEKGLFSLSVEYSEEDKI-------LALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQH 1057          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.930e-31
Identity = 176/656 (26.83%), Postives = 276/656 (42.07%), Query Frame = 1
Query:   25 DAGVVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-KVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELES-VGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNA---SDFLGHKEELLDHLHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVS--------SSPT------WPYSKSGLPDLQQRLKECGNGSRWL---IPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLS--WVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEAR-KRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCE-TMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
            D   +LD+   +   DL  NPWE PP  +V+ G+  ++ YY+ + +     +    KVV IG    GKTSL +SI  G   +TQ   +ES V V V+ H+    V+G   ++++D AGQV YYGL QLFLT RA+Y+LVW+A   S+  G   E L  +  W+  L  R P + V+L G   D+ +                    + +DVE   +   + W  +    QP       GL +E  + LVS        S+P       WP  KS      + + +  +  R +   +PPS+  AL +L+ L        + RR  K E     +T   L   W H +   L+      +           P+ A+  A+ +R+  G L+++   VFLDVE  A  L  + +H+          +        R  + A  +RL +E V E + A  LW  +   +   + + L   G+  PL               P +     ++L+R+      E ++    A +  + +  +     F  G    G VERL+A C  +G       WR GA  VG+     A  G F+L++  +    + K       V+  G  +    W AL  V+S   ++  EFP L  E    CP+H
Sbjct:  394 DLARLLDVFDGLRSLDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHK----VDGHP-IRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA-IAPWLRYLTFRVPNANVILVGNKWDRVVRTR---------------GTVADDVECESRRWLKSWMEKAHGHQPH------GLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEEL------ASSSRR--KAEQRTRGITRADLEEKW-HAKVAELNGAGTPVAA----------PEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDS-------YGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPE---LAPHLLLALKSAGLTFPL---------------PNDPNGGLVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPP-GFVERLLARCCHLGYPY--PFWRYGALIVGN----GAEKGLFSLSLDYSEHDNMLK-------VEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQH 964          
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 1.350e-30
Identity = 178/650 (27.38%), Postives = 273/650 (42.00%), Query Frame = 1
Query:   37 VLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYDELKRADPVFIDSR-KVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELES-VGVSVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNA---SDFLGHKEELLDHLHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAWLRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQLVSSSPT--------------WPYSKSGLPDLQQRL-KECGNGSRWL---IPPSWCHALIVLDALRDGVNPVEAVRRYLKPEDPLPVVTTEKLSWVHWETLRLHWKHVQDSVDLPAELKPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQEHPPHAHFSSERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQQIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASCETMACFNAFEKLRE-EWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMDTCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGSRDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKH 1914
            +LD L R+    +  NPWE PP  +V  GI  ++ Y++ +       +    KVV +G    GKTSL +SIK GK  +T+G   ES V V V+ H     ++G   ++++D AGQV YYGL QLFLT RA+Y+LVW+A   S+  G   E L  +  W+  L  R P ++V+L G   D+ +            RR+    A+  DVE   +   E W    R  QPR      G+ +E  + LVS + +              WP  KS  P L  R+  +  + +R +   +P S+  AL +L+ L              K E     +T   L    W+           SV  P        D A+  A+ +R+  G L+++   VFLDVE  A  L  +  HK        ++   +         ++  RL  E VLE + A  LW      +   + + L   G+  PL     + D + G +          +L+R+  K   +        ++  + +  +V +  F  G    G VERL+A C  +G  +    WR GA  VG  A        F+L+++ +    +       L V+  G       W AL  V+S   ++  EFP L       CP H
Sbjct:  326 LLDSLERIYRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDH----DLDGHP-IRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLA-IAPWLRHLTFRVPDASVILVGNKCDRVVRT----------RRT----AVAVDVEHESRQWLESWIEIARGHQPR------GISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKS-TPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRS--------KTEQQTRGITRAILE-EKWQAKVAEMNRAGTSVAAP--------DAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRD------SYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPV---LAPHLLLALKSAGLTFPL-----SNDSNGGLV----------ILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPP-GFVERLLARCCHLG--LPYPFWRYGALIVGKGAEERM----FSLSLEYSEARKI-------LTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLH 893          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1108.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE4.080e-6829.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW02_9PHAE1.390e-6631.83Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVX5_ECTSI1.880e-6331.25LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL98_ECTSI3.340e-4229.28LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUD0_ECTSI1.040e-4130.03LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KSZ8_9PHAE1.160e-3929.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL89_ECTSI1.530e-3728.24LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI8.770e-3327.44LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX56_ECTSI1.930e-3126.83LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FJV1_ECTSI1.350e-3027.38LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1108contigA-nodosum_M_contig1108:109653..113943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FVX5
Preferred nameSLITRK2
PFAMsLRR_8
Model size1989
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
Exons5
Evalue3.09e-64
EggNOG OGs2CMPC@1|root,2QR6C@2759|Eukaryota
Descriptionpositive regulation of synapse assembly
Cds size1989
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866498.7135756-CDS-A-nodosum_M_contig1108:109652..1096821680866498.7135756-CDS-A-nodosum_M_contig1108:109652..109682Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1108 109653..109682 -
1680866498.727923-CDS-A-nodosum_M_contig1108:109907..1107691680866498.727923-CDS-A-nodosum_M_contig1108:109907..110769Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1108 109908..110769 -
1680866498.7372012-CDS-A-nodosum_M_contig1108:111188..1118171680866498.7372012-CDS-A-nodosum_M_contig1108:111188..111817Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1108 111189..111817 -
1680866498.7496543-CDS-A-nodosum_M_contig1108:112290..1125281680866498.7496543-CDS-A-nodosum_M_contig1108:112290..112528Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1108 112291..112528 -
1680866498.7635467-CDS-A-nodosum_M_contig1108:113713..1139431680866498.7635467-CDS-A-nodosum_M_contig1108:113713..113943Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1108 113714..113943 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1108.5.1prot_A-nodosum_M_contig1108.5.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1108 109653..113943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1108.5.1

>prot_A-nodosum_M_contig1108.5.1 ID=prot_A-nodosum_M_contig1108.5.1|Name=mRNA_A-nodosum_M_contig1108.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=663bp
MSGLGKGEDAGVVLDLLSRVEHFDLGNNPWECPPAPVVSKGIGPMKKYYD
ELKRADPVFIDSRKVVFIGCSGAGKTSLIKSIKAGKGQLTQGEELESVGV
SVQCHRFETGVEGEAEVKLYDLAGQVEYYGLHQLFLTERALYVLVWNASD
FLGHKEELLDHLHDWMTTLHLRAPRSTVLLCGTHKDKCLANNLFAKSMAW
LRRSPSVEAIMEDVEQSIKNKYEQWKREPRTRQPRMTSRNGGLQVERRIQ
LVSSSPTWPYSKSGLPDLQQRLKECGNGSRWLIPPSWCHALIVLDALRDG
VNPVEAVRRYLKPEDPLPVVTTEKLSWVHWETLRLHWKHVQDSVDLPAEL
KPEDPDFALESAMDLRERGGSLLKHPQVVFLDVEELALTLASILNHKMGQ
EHPPHAHFSSERQPEERWISEARKRLMSEGVLEARFARSLWKKDNIDMPQ
QIFVVLVKLGILLPLIPPRYTWDVSLGTMSPWEHVKEYMVLMRLPLKASC
ETMACFNAFEKLREEWGVVAKWKFDRGRNAYGLVERLVASCHAIGNVVMD
TCWREGACFVGHQASINAAGGSFALAVQLTRCATLNKPTAGTLAVQAFGS
RDGRAVWGALRFVISSAWRLFEEFPELGWEAWVECPKHHGQVQHYLAGVS
DSKGRSPGDPIVP
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mRNA from alignment at A-nodosum_M_contig1108:109653..113943-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1108.5.1 ID=mRNA_A-nodosum_M_contig1108.5.1|Name=mRNA_A-nodosum_M_contig1108.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4291bp|location=Sequence derived from alignment at A-nodosum_M_contig1108:109653..113943- (Ascophyllum nodosum dioecious)
ATGTCAGGGCTAGGAAAGGGCGAAGACGCAGGCGTCGTTCTAGATTTGTT GTCACGTGTGGAGCATTTTGATTTGGGAAACAATCCATGGGAATGCCCAC CAGCACCTGTCGTCTCCAAGGGCATCGGTCCGATGAAGAAGTACTACGAT GAGCTCAAAAGGGCGGATCCTGTCTTCATCGATTCGCGAAAGGTGGTGTT CATCGGGTGTAGCGGAGCTGGGAAGACGAGGTGCGGCCAAGAAAGGACTA GAGACAGGACGTGATGTTGACGATACCTGTTCAAGTGTGATGACCGGAAA CAGTGAAACATTCTTGCGAGAGACCCTGTGGCAGCTCCACCCGACGACCG CGCCCCTCTGCTGTTAAACTCCTGCTGCCGGGGTGCTAGAGAAACATCAC ATACGACCCTGACTCGTACAAAGTATTTCATGGCCATCGGGAAAAGGGGT AGCGTGCTGCTTGGCTTCGTTATCATAGTTGTGTTTTTAGCATCGTTATA AAACATAATCGAGTAAGCAATAATATATTTTGTTGTATTTTTTCAACTGG TCGAGCTACATGTCAATTGAGCAAAGCAAAGCAACCAGCATTCTCTTCAC CTCCCAACCGAACTTTCGGCCACAAATACGGCGAACACATGTTTTGGTTT AGGAACCAATAGCTTGACACACCTGGTTCGTATCTCAACATTTCAGTTAG TCCGCGTGACAAATGGTATATCAAGGTTTCGCTTGACAAGCTTTTCTTGA TACGTTGCACCCAGCGATTGCTGGTAGAGTTGGTAGATGAAATTAGGGCC AACTTTCGTGACCAAGAGCCTCTTCCGATGTTTCCCCCACTACGTTAGTC CAGGACTAAACTCGACATGTTGTTTAGAAATGTTGCCGGTTAATCAAATT TAATTTGTTCCTGCAATGCACGTGTGTCCCCCCCTTACTGCCGAAGATCC GTCGGTCGATAGCGCTCTCACGACCCCCCTTCCGCGTCTCTTTAACGTGG TTACTTTAGTCACCACCGTTTTTGTCACAAGGGATGTCGGAGAGCCGTAT TAAAATCCTCAAACCCACCTAATAACCTGCACCCTATCGTTTTGCGGTGT GTTCAGATGCAAGTACAGTGCGGGCATGACTTTTGCTGTTGGAGCGTGGG GTTGCCCGAAATCGTCCATATTATGTACTTTCCATATTATAATTTTATTC GGGTTGGCAACCAATAAGCTCAATTTGAGAAGCAACAACATCGCTGTGAT ATAGATGACGATATTAGCGTGCTTATTTTGTGACTCTGGTGATAACTAAC TCAACAGTAGTCCGGGACATACACCGTCTTCGTCACGGATCAACCATATT CATTCCTCATTATTTCTCCTATTTTTTGCACTACTGTGCGTGATTGTCTC CCCGTTGCTCGAAAGCCTGATCAAAAGCATCAAGGCCGGGAAAGGGCAAC TGACGCAAGGGGAAGAATTGGAATCCGTGGGAGTGTCAGTTCAGTGTCAC AGATTCGAAACTGGGGTTGAAGGTGAAGCTGAGGTGAAGCTGTACGATCT GGCAGGTCAAGTGGAGTACTACGGTCTTCACCAACTATTCCTAACTGAGA GGGCTCTTTACGTGCTGGTGTGGAATGCTTCCGACTTCCTGGGACATAAA GAGGCGAGTTACTTGGCTCTCTCTCCACCTTATATGAGGGCGACTTCTGC GTCTTCTTTCAAACCTATGCTTTGTACAACACATACCGATCTAGTGAACG CTCTTCAGTTGCCGTTATTTCTTAGCCGAGGTAGATTGTTGCCAACTGAC GTCATATACCGCCTTGGTTAGTCTTCGTTGGTTGCCGTCGCTTCAGACGA GAAGTCACGTGCCAATCACCGACTGGAAATCACGTGTGTACAGGTTCTTC CACCTTGCGAATGGTGCCACAATACTCGCATATATCTCCCGACTGTGACC CCCCATCTGTCTTCGGTCATCTGTCTTAGGTCATCGATACGAAAGGCGGG GGGATCGTAATGCGCTATCTTCCGTTTTTTTCGCTTAGCGAACGCCAAGT AGTGTCATCTGCCTGTCTCGTTGTTTTAGTCTCGCTCTTGTCATTACGTC GCCGTTTTTCGTTTGTTCGTTTTCAGGAGCTTTTGGACCACTTGCACGAC TGGATGACAACGCTGCACCTGAGAGCTCCCCGGTCGACGGTTCTTCTTTG CGGTACACACAAGGACAAGTGCTTGGCCAATAATCTCTTCGCGAAATCAA TGGCATGGCTAAGACGATCTCCGTCCGTCGAGGCGATCATGGAGGATGTG GAGCAGTCAATCAAAAACAAGTACGAGCAGTGGAAACGCGAGCCTAGGAC ACGCCAGCCTCGTATGACATCGAGAAACGGAGGTCTACAAGTTGAGAGGA GAATTCAGCTCGTCAGCTCCTCGCCAACGTGGCCTTACTCTAAGAGCGGC TTACCCGATCTGCAACAGCGACTGAAGGAATGTGGGAACGGTTCACGATG GTTGATCCCGCCATCGTGGTGTCATGCTCTGATAGTACTAGACGCCTTGC GGGATGGAGTCAACCCAGTGGAAGCTGTCCGACGCTACCTGAAACCAGAG GATCCCCTTCCAGTCGTAACTACGGAGAAACTCAGCTGGGTACACTGGGA GACTCTTCGGCTTCACTGGAAGCATGTGCAGGATTCCGTTGACCTTCCGG CGGAACTCAAACCTGAAGATCCCGACTTTGCTCTTGAGAGCGCCATGGAC TTGAGGTGATAGACGACCGTATATGGTATATCACATGAGGTTTGTTCAAA GGAAGATTTCACTGGAAGCTGTTCACGGCAAAACCACATGTACTACTTCA TTTTTGAGATTATAGAGAGTGTCACAAAGTGTAAAAGGGTTTCGCTCGTG CTCTCCGCAGAGTTTGTTAATGCACAGCTATCTCCACCAACGCCTGCCAT GTTTTCTTCCAGCTTCATACTATCTTGACTACCTGAAACACTAGATTTTT CTAAAATCCTGCAAAGGATTTTTTCGTAGGTCTACGTGGATTGCTTGCGT GTGGCTCCAGTAAAAGTGTCCGGGATGGGTAAATCTATGTGTGATGATTG CTGATTGATGGCGTGTTTATCGACTTTTCTAACAGCTCATGATTGTCTCG CCTTGTGATATTTTCCTGCATCAGAGAACGTGGTGGATCGCTCCTAAAAC ATCCTCAAGTGGTATTCTTGGATGTGGAGGAGTTGGCGCTTACTCTCGCT TCAATTCTCAATCACAAAATGGGTCAGGAACACCCTCCACATGCGCATTT TTCCTCGGAACGCCAGCCCGAAGAGCGGTGGATATCGGAAGCCAGGAAGC GACTCATGAGCGAGGGCGTACTAGAAGCACGCTTCGCCCGCTCTCTCTGG AAAAAGGATAACATCGATATGCCGCAGCAGATTTTCGTTGTGCTTGTCAA GCTCGGGATTCTTCTCCCGTTAATACCACCGAGGTATACATGGGACGTGA GTCTTGGTACCATGTCTCCGTGGGAACACGTGAAGGAATACATGGTGTTG ATGCGATTGCCGTTGAAAGCCTCGTGTGAGACCATGGCCTGCTTTAATGC ATTCGAGAAGCTTCGAGAGGAGTGGGGGGTGGTGGCGAAGTGGAAGTTTG ACCGCGGGAGAAATGCTTATGGGTTGGTGGAACGTCTCGTGGCGTCCTGC CATGCCATCGGGAACGTGGTGATGGACACGTGCTGGAGGGAAGGCGCTTG CTTCGTTGGTCACCAAGCAAGTATAAACGCGGCAGGTGGCTCCTTTGCCC TGGCGGTACAACTCACCCGGTGTGCTACCCTGAACAAACCGACAGCGGGG ACTTTGGCTGTCCAGGCGTTCGGATCAAGAGACGGTCGCGCAGTGTGGGG GGCCCTTCGGTTCGTCATCTCATCCGCATGGCGTCTTTTTGAAGAGTTTC CTGAACTAGGTTGGGAAGCCTGGGTGGAGTGCCCGAAGCACCATGGGCAG GTGCAGCACTACCTCGCTGGCGTCAGCGATAGTAAGGTGCGTGTCACAGA CTGATTGGTACGATTTACGCTCCCCGCCTGGTTGTCGGTGTCCATATCCG TCAGACTTGCGGCGTTTGACCGGAAAGCGAGAGCGTGTGCTTAAGAAGGG CTGCCTCAATCATTTACTCGCTGTAAGATAGTATTCAATGCTCGATCTGT AGAGCAATGTGTCGGACTCGAAATCAAATTTGTACTTGAGCTGAATGTAT TGTTACTGCAGGGAAGGTCTCCAGGTGATCCGATTGTACCT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1108:109653..113943-

>mRNA_A-nodosum_M_contig1108.5.1 ID=mRNA_A-nodosum_M_contig1108.5.1|Name=mRNA_A-nodosum_M_contig1108.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1989bp|location=Sequence derived from alignment at A-nodosum_M_contig1108:109653..113943- (Ascophyllum nodosum dioecious)
ATGTCAGGGCTAGGAAAGGGCGAAGACGCAGGCGTCGTTCTAGATTTGTT
GTCACGTGTGGAGCATTTTGATTTGGGAAACAATCCATGGGAATGCCCAC
CAGCACCTGTCGTCTCCAAGGGCATCGGTCCGATGAAGAAGTACTACGAT
GAGCTCAAAAGGGCGGATCCTGTCTTCATCGATTCGCGAAAGGTGGTGTT
CATCGGGTGTAGCGGAGCTGGGAAGACGAGCCTGATCAAAAGCATCAAGG
CCGGGAAAGGGCAACTGACGCAAGGGGAAGAATTGGAATCCGTGGGAGTG
TCAGTTCAGTGTCACAGATTCGAAACTGGGGTTGAAGGTGAAGCTGAGGT
GAAGCTGTACGATCTGGCAGGTCAAGTGGAGTACTACGGTCTTCACCAAC
TATTCCTAACTGAGAGGGCTCTTTACGTGCTGGTGTGGAATGCTTCCGAC
TTCCTGGGACATAAAGAGGAGCTTTTGGACCACTTGCACGACTGGATGAC
AACGCTGCACCTGAGAGCTCCCCGGTCGACGGTTCTTCTTTGCGGTACAC
ACAAGGACAAGTGCTTGGCCAATAATCTCTTCGCGAAATCAATGGCATGG
CTAAGACGATCTCCGTCCGTCGAGGCGATCATGGAGGATGTGGAGCAGTC
AATCAAAAACAAGTACGAGCAGTGGAAACGCGAGCCTAGGACACGCCAGC
CTCGTATGACATCGAGAAACGGAGGTCTACAAGTTGAGAGGAGAATTCAG
CTCGTCAGCTCCTCGCCAACGTGGCCTTACTCTAAGAGCGGCTTACCCGA
TCTGCAACAGCGACTGAAGGAATGTGGGAACGGTTCACGATGGTTGATCC
CGCCATCGTGGTGTCATGCTCTGATAGTACTAGACGCCTTGCGGGATGGA
GTCAACCCAGTGGAAGCTGTCCGACGCTACCTGAAACCAGAGGATCCCCT
TCCAGTCGTAACTACGGAGAAACTCAGCTGGGTACACTGGGAGACTCTTC
GGCTTCACTGGAAGCATGTGCAGGATTCCGTTGACCTTCCGGCGGAACTC
AAACCTGAAGATCCCGACTTTGCTCTTGAGAGCGCCATGGACTTGAGAGA
ACGTGGTGGATCGCTCCTAAAACATCCTCAAGTGGTATTCTTGGATGTGG
AGGAGTTGGCGCTTACTCTCGCTTCAATTCTCAATCACAAAATGGGTCAG
GAACACCCTCCACATGCGCATTTTTCCTCGGAACGCCAGCCCGAAGAGCG
GTGGATATCGGAAGCCAGGAAGCGACTCATGAGCGAGGGCGTACTAGAAG
CACGCTTCGCCCGCTCTCTCTGGAAAAAGGATAACATCGATATGCCGCAG
CAGATTTTCGTTGTGCTTGTCAAGCTCGGGATTCTTCTCCCGTTAATACC
ACCGAGGTATACATGGGACGTGAGTCTTGGTACCATGTCTCCGTGGGAAC
ACGTGAAGGAATACATGGTGTTGATGCGATTGCCGTTGAAAGCCTCGTGT
GAGACCATGGCCTGCTTTAATGCATTCGAGAAGCTTCGAGAGGAGTGGGG
GGTGGTGGCGAAGTGGAAGTTTGACCGCGGGAGAAATGCTTATGGGTTGG
TGGAACGTCTCGTGGCGTCCTGCCATGCCATCGGGAACGTGGTGATGGAC
ACGTGCTGGAGGGAAGGCGCTTGCTTCGTTGGTCACCAAGCAAGTATAAA
CGCGGCAGGTGGCTCCTTTGCCCTGGCGGTACAACTCACCCGGTGTGCTA
CCCTGAACAAACCGACAGCGGGGACTTTGGCTGTCCAGGCGTTCGGATCA
AGAGACGGTCGCGCAGTGTGGGGGGCCCTTCGGTTCGTCATCTCATCCGC
ATGGCGTCTTTTTGAAGAGTTTCCTGAACTAGGTTGGGAAGCCTGGGTGG
AGTGCCCGAAGCACCATGGGCAGGTGCAGCACTACCTCGCTGGCGTCAGC
GATAGTAAGGGAAGGTCTCCAGGTGATCCGATTGTACCT
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