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Homology
BLAST of mRNA_A-nodosum_M_contig1106.2.1 vs. uniprot
Match: D8LQY7_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY7_ECTSI) HSP 1 Score: 239 bits (609), Expect = 1.660e-64 Identity = 119/184 (64.67%), Postives = 139/184 (75.54%), Query Frame = 2
Query: 935 SSVRGAWRWYDRPNVAKLLNDIADAMFAHGYRDQAADLFERSVEIYYAYEGPNGHGGLAEALNDLGYALWEACASPAFSGQE-GEKLACTLVANAEEVFRLAYEECGENPGYGHPFAAVCLSNLADCVSARCAYKNAAELLKRALRVRLMSLGSKHLDTADTLRRLGGIQHQQGYLDDAEGCYV 1483
S +R AW W DRP VAK+LND+AD+M A G+ DQAADLFER VEIY Y GP GHG +AEALNDLGY LW+ACA+P F GQ+ E +ACTL+ANAEEVFRLA ECG PG HPFAA CLSNLADC SAR A++ A L + AL VR LG K LDTADTLR+LGG+ H+QG L++A Y+
Sbjct: 395 SELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLVYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCASARLAHEEATLLCQWALHVREECLGPKDLDTADTLRKLGGLLHRQGLLEEARVNYL 578
BLAST of mRNA_A-nodosum_M_contig1106.2.1 vs. uniprot
Match: A0A6H5LDX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX5_9PHAE) HSP 1 Score: 216 bits (551), Expect = 7.540e-57 Identity = 123/257 (47.86%), Postives = 143/257 (55.64%), Query Frame = 2
Query: 917 VTATATSSVRGAWRWYDRPNVAKLLNDIADAMFAHGYRDQAADLFERSVEIYYAYEGPNGHGGLAEALNDLGYALWEACASPAFSGQE-GEKLACTLVANAEEVFRLAYEECGENPGYGHPFAAVCLSNLADCV-------------------------------------------------------------------SARCAYKNAAELLKRALRVRLMSLGSKHLDTADTLRRLGGIQHQQGYLDDAEGCYV 1483
V A S +R AW W DRP VAK+LND+AD+M A G+ DQAADLFER VEIY AY GP GHG +AEALNDLGY LW+ACA+P F GQ+ E +ACTL+ANAEEVFRLA ECG PG HPFAA CLSNLADC SAR A++ A L + AL VR LG KHLDTADTLR+LGG+ H+QG L++A Y+
Sbjct: 664 VVAAEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCARLTWLTRHAALPPXXXXXXXXXRRAECLWSEEFFEISVVCAKYCSPPSPSPSPPCLLQPETTHSKIQSARLAHEEATLLCQWALHVREECLGPKHLDTADTLRKLGGLLHRQGLLEEARVNYL 920
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 2880.D8LQY7 |
| PFAMs | TPR_10,TPR_12 |
| Model size | 1648 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Evalue | 2.66e-65 |
| EggNOG OGs | COG0457@1|root,KOG1840@2759|Eukaryota |
| Description | determination of stomach left/right asymmetry |
| Cds size | 1644 |
| COG category | C |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866496.1993654-UTR-A-nodosum_M_contig1106:64681..64685 | 1680866496.1993654-UTR-A-nodosum_M_contig1106:64681..64685 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1106 64682..64685 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866496.2131195-CDS-A-nodosum_M_contig1106:64685..65592 | 1680866496.2131195-CDS-A-nodosum_M_contig1106:64685..65592 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1106 64686..65592 + |
| 1680866496.2231307-CDS-A-nodosum_M_contig1106:65890..66035 | 1680866496.2231307-CDS-A-nodosum_M_contig1106:65890..66035 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1106 65891..66035 + |
| 1680866496.2330523-CDS-A-nodosum_M_contig1106:70905..71027 | 1680866496.2330523-CDS-A-nodosum_M_contig1106:70905..71027 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1106 70906..71027 + |
| 1680866496.2419374-CDS-A-nodosum_M_contig1106:72703..72842 | 1680866496.2419374-CDS-A-nodosum_M_contig1106:72703..72842 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1106 72704..72842 + |
| 1680866496.2527256-CDS-A-nodosum_M_contig1106:73902..74067 | 1680866496.2527256-CDS-A-nodosum_M_contig1106:73902..74067 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1106 73903..74067 + |
| 1680866496.2637844-CDS-A-nodosum_M_contig1106:74841..74950 | 1680866496.2637844-CDS-A-nodosum_M_contig1106:74841..74950 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1106 74842..74950 + |
| 1680866496.2719524-CDS-A-nodosum_M_contig1106:76171..76228 | 1680866496.2719524-CDS-A-nodosum_M_contig1106:76171..76228 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1106 76172..76228 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1106.2.1 >prot_A-nodosum_M_contig1106.2.1 ID=prot_A-nodosum_M_contig1106.2.1|Name=mRNA_A-nodosum_M_contig1106.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=548bp
MSGSFCSSTGDGGGGGRGFVVGSDCGLSPVEHDSCRGRRRKGDDDDVAGG
ETVVVGDRGEGVAAASASRRGKGGFTADPVSFLSSPSSSMPSLVEMARSS
GGCRDSAIAFSSSPLLSGKFGGAGSGGKGSVAPLSSSSSFHVDVPRGGGA
SGAMLRPSLQVRGTVPGGGGLETGEGKSGGKLLHATAAPAAATRTSATRN
DRAGGERAGASRNVVPSPPALNDPRSRPVAEVARAAPKPRDGPGRRCRTG
KTMHDGARGGWVDDDVKVEVDVGVDASPKSKGAGSGRKLDGATAFSSAQR
RNGGVTATATSSVRGAWRWYDRPNVAKLLNDIADAMFAHGYRDQAADLFE
RSVEIYYAYEGPNGHGGLAEALNDLGYALWEACASPAFSGQEGEKLACTL
VANAEEVFRLAYEECGENPGYGHPFAAVCLSNLADCVSARCAYKNAAELL
KRALRVRLMSLGSKHLDTADTLRRLGGIQHQQGYLDDAEGCYVRALRIFV
DVLGPDHENVGSALNLLAVVVGEQGRYLEAENFHRRALSQRRNAGARG back to topmRNA from alignment at A-nodosum_M_contig1106:64682..76228+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1106.2.1 ID=mRNA_A-nodosum_M_contig1106.2.1|Name=mRNA_A-nodosum_M_contig1106.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11547bp|location=Sequence derived from alignment at A-nodosum_M_contig1106:64682..76228+ (Ascophyllum nodosum dioecious)
CACCATGTCGGGCAGTTTTTGCAGCAGCACCGGTGACGGCGGCGGCGGAG
GGAGGGGATTCGTCGTCGGCAGCGACTGTGGCCTCTCCCCTGTTGAGCAT
GATAGCTGCAGAGGCAGGAGAAGAAAAGGTGATGACGATGATGTAGCGGG
GGGAGAAACGGTGGTGGTTGGGGATCGAGGCGAAGGCGTCGCCGCCGCGT
CCGCCTCCCGGCGGGGCAAGGGGGGATTCACCGCCGACCCCGTTTCGTTC
TTGTCTTCGCCATCATCTTCGATGCCGTCATTGGTCGAGATGGCACGGTC
CTCGGGCGGGTGCAGAGATTCCGCGATAGCCTTCTCGTCGTCGCCGCTGC
TTAGTGGAAAATTTGGGGGCGCGGGCTCGGGCGGCAAGGGCTCGGTTGCG
CCCTTGTCGTCATCGTCGAGTTTCCACGTGGATGTCCCGCGTGGCGGGGG
GGCATCAGGGGCGATGCTACGCCCATCGTTGCAGGTCAGAGGAACGGTTC
CGGGCGGCGGTGGACTCGAGACTGGCGAAGGAAAGTCGGGAGGCAAACTG
CTACACGCTACAGCAGCACCAGCAGCAGCAACAAGAACATCAGCCACTCG
AAACGATCGAGCAGGGGGGGAAAGGGCCGGTGCCAGCAGAAACGTCGTTC
CTTCTCCACCCGCCTTGAACGATCCTCGGAGCAGGCCAGTCGCCGAGGTA
GCACGGGCGGCCCCCAAGCCACGGGACGGTCCGGGGAGGCGTTGCAGAAC
GGGGAAGACGATGCACGATGGTGCTCGCGGCGGCTGGGTTGACGATGACG
TGAAAGTTGAAGTTGACGTGGGTGTGGATGCGTCTCCTAAGAGCAAAGGT
GCTGGATCTGGAAGAAAGTTGGACGGAGCCACGGCGTTTTCGTCCGCCCA
ACGAAGGAACGGTAAGCAAATACAGTAAGTACTTGGACTGCCTTTCGATA
TAGATGAAGATGTGGGCGATCTTTTATAGTGTTAATTGACAAGTTAGTTG
GCGTGAAGTCTGCTTTATTTTTGGTGTGGTTGGATTTTTTGTGCATTTTC
GTGCGGTATATTATATTGTAGTGTACTGTAGGCAGTATTATGGACGGTAG
TCGTGGGAGAGTCCGTCTTTCATCAGTTTTATATATCATCTCTACATATT
TTACTTTACCTAACGCTTTAAAAAGCATTTTTCTATCGTGTTATTATTGT
GTTGCACAGGAGGCGTTACTGCTACTGCTACCAGCAGTGTTCGCGGGGCG
TGGAGGTGGTACGATCGTCCCAACGTGGCCAAGCTGCTCAACGACATCGC
TGACGCCATGTTCGCCCACGGCTATCGGGACCAAGCGGCGGACCTATTCG
AGAGGTGAAACAAAAGAAAGAACCGCCCCCCTCTATAACTTCTATAACCA
CCCCCTACAAGTAAATCATCCAGAAAAAAACCAAACACAAGAACAAAATA
GGGAAAAACTGAGGGTGTGGGTGAGCACGCTCTCCCTTGCCATGGAGCAT
TTTTGTCAAGCAGCCCCAGGTTCCACACATGATGAGGTGTACTTGTGTAC
ATCGGTGACGTTTGTAGTGTAGTGTTCTAGTGTAGTGCAGGGGGAAATGT
GCTTGGAGTGTACGATGTGTAATTTAAAGTTTAGTATATAAAGTACATCA
TTATTAGGTATAGAGCAGTATCGACGGTGTACATACCATGTTAACGTTTT
TGTTTTGTTTTGTTGTAGTGTAGTTGTAGTTAATGTTGATTCGCACAATA
AGCGTATTGTCCTTGCAACTGATGAATCTACGGTTACACAAGTCAGCCAT
AGACCTATCAAATGCCAATCCCGCTTGTGGTCACAAAGAGGTACGAAGAA
CAACGGGCCACATCACGGTGACAACCCGCTACTCAGACCAACAGGGGTCC
AAATCACGACAAAAAGTTATGAGACTCTCTACAAGTAATGGCACCGACCT
ATGTCAAAACGGTTCATCGAACCTCCTCACTCCATATCGAGAGCAGCCTC
GATCGACTTGGATTGTTGTCGCCTAACCACGACCTGCGTTCTCACCAACA
AAGTGGGCAAAATAGGCTCCAAGCAGTTTTGATCAACGAGTCCAAGTTTC
TCAAGGCCACACATCGTACAAAAATAAGGAAAATTCAATACCGAGATCAA
TGGTGGTGGAGGCCTTGAGCTGGTGGAGTCGGCGTGCGAGCCAGCATCCA
GCCGTTCAAAACCGTGTGCATCCTTGAAAAAGCCCCACGAATCTTGCCCC
TTAGCCGCTCCTTGTTGGTCCTCGGAGGAAGAAAACAGACCGTGGTCAGA
GATCAGCTTTTCCCTTAGAAACCTGCCTGTTCGCACCTTTGATTCTCGCG
CACAGGGGTTCAGCCCTCCACCGGCTTTGTCAACGATCGAGCTGCCCTCC
GCCCTCGCCGAATCTGTAGTGTAGTGCAGGGGGAAACGTGCTTGGGAGTG
TAAAGCGAAGTACCTGGTACTTGAGAAGGCTTAACAGGGGCGTTTGACCG
TCTGTTTATTTTCCATCCTTGTTTGGGCAGCGAGATCAAGAGCCCGAGTA
CAGTTTCTTCCCAAACTAAAAGCAGTCCCAAGATATGGCTCAGCAAGGAT
CTATCATGAATCAACCCCGCAAACCTGTGCACGGCACAAAATGTAAACCC
CAAACCAAATTTGTTCTTCACTTGACTTTACTATAACTTTCCTGAAAAAT
GTCGTACTAGTTTGGTACTAACAGCCTCTTAACACCTACGGTTAGAGACG
AAGTAGGCGTACACTACTTGGGGTATGTAAACAGTGTACTGTAAAATGAC
TGATCATGGTGGCTGGCCCATGTAAAGTAGCGCGAGCAGCACAGGACTGT
CAAGAAGAAAAAAATAGCCGTTGTCAGACCGATAGTACCAAAAGGGTTGT
ACAGCAGTATCAATGCTGTAGTGTACCGTGTTAACGTTTTTTGTTTTGTT
CTTACGGGATGGATGACCGGTGTGTTGCGCGAGTGACATGTGTACGGTTA
GGAGTTACAGTATGTAAGTCTCCTTCATTGGCCTCGTTCTTTGTGCGGTA
CGGTACTTTGAACATGAAATGTTGAAATAAAAATTTGAACGCATCCAAAC
CCTCAAAGCATCCCCCAGACAAGGTGGAAAAATATATTAAAAAAAACATT
CAGATGGGAACATTGTTTCTTGTATCGCCACACATGTAGCAAGAGTATGG
ATGAACCGGGCAAGGTTGCCAATCCTGCTCGTGGTCAGCGAAACAGGAAA
AATGAAATCTTCCCTGTCTCCGTTCGCGCCTTTAGAATTTGGTCTCGCGA
GACGGGTTGGGCAGTCCCATCTCCCGTCAGCCTGCTCATTCCATACTCAA
GCTGAATCTGGTTCTTACTTGTGGGATTCCTTTCGAGTTCCGCGGCGGCG
TCCATTTATTTATCTAAACCGCCACACGTCATCGGTTCAGTTACGAGTTT
ATCGAGTCACGCAATTGCGTATCGATGGCGTTCACTGCCGAGAGTCCGAC
GGCACAGAACCAGTAGTCCTCAAGGTAGTTCCAGTAACGGGTGCTGCCTT
GGCAGGTTACCATGTGTATGTGTGTTGCCATCCCATTTATTCTGGACGTA
AGACTTGTGGACGCACCAGCCGAGGTCACACAGTACTTCTCCGCCTCCCC
TCTGCGCGGTGCTTGCCTTCATTTTTATCGTTAGAAACATTTTGCCGTGC
CTTTCCCTCGTCGACCGAGAAGTCGAATTCCGTGTAACCACGAACTAATC
GTTCTTCATTTTTTGTTGTTTGTTGTGTGAGGAAAAATCCAAGTTCCGTA
CGACTGCACCGACATTCGAACTCACTTCCCAACGCCAGAAGGTTTCGAGG
TTACTGTACCAACTGAGCCACCGCGACGAATGAAGTGGGAATGTCGAGAG
AAAAGTACCGTTGTACTGTATTGTGTTGATACGACGTATATTACCTGGTG
GTGTAGACTCGTAGTATTAAACGAAAAATCTGAACGCATCTAGACCTTCT
GAGCATCCCACACAGGGGGAAAAATGCCAAAACGTATTATTTGATACAGT
ATAACAGGTGGGTTTAAAGAAAAATCAGATCTACCATAGTAACGACAAAT
CATTTCCGATAATTTTCTTTTCCTTCCGACTATAAAAAAGAAGGAACAGT
TGTTGGTCGTATTTGTTCTTACTATAATAGATGGGCGCAAGGAAATCGCG
CGTGAAAATTCTTGGATACCCCACACACAGTACAGCTCAGATTATAGTAT
ATAGGACAGTATAGTCTTCATTCTGACGGGGTCGGGAGATCGGGATTTCC
CGACAAACCCAGGGGGGTGTTGAGCCCCTTTGCGCGAGAATCGAAGGTGC
GGACCGGAAGTTTGTGAGGGAAAAGCTGATCTCTGACCACGGTCTGTCAT
CTTCCTGGGAGAGCCAAGCAGAAGAGGCGAACGGGCGAGACTACTGCGGC
GTGTTTCAGGATGCTTGCGGCTTTGGGCGAGAGGAAGCTTGCTTGCGCGC
CGGCTTCACGATCTAAAGGCCTCCATCGCCATGAACCTCGGTATTACAAT
TTTCCTTTTTTTCCTTATATTATCAGCGTGGCGGTCGTGAGATGCTTGAA
CTTGTTTGAAAAGGATTTGGGCATGATTTTGTCCGCTTTGTTGGTGAGAA
CGTTGGCCGTGGGTAGGCGACAACAATCCGAGTCGATCGGGGTTGCGCTC
GATATGATCTATTAATAAATATGTTTCATGAGCAGGTTTGACGTAGTAAG
TTGGTGATATTTAAAGAAAAATCAGAGCATTCTTGTGTAAGTTGTTGCAT
CACTCGTCTTCGTGTAACTCTCTGATAGCGACAGCTCAGAAAACGTTTTC
GAGAAAGATTTGATGACGTTGTTGGATGGGCAGCACTCATGTAGCTTGTA
ATTTAGATTCTGAAGTACGGGCAGCACTCTAGGCAAGGAACTATGGTTCC
AATGTTCTCGGGCGGTTGGCTTGGACCTGGCAAGGATTTTGTCGCGATTT
TGATCCCTCTTGGTTTTTGAGTAGCGGGTTGTCACGATAAGGTGACACGT
TGACGCCGACTCGTTTTGTCACCGTAGTTTCTTCAATACCAAAAACAGAA
TGCTGAATGTTTAAAATCAATCAGAAAAATCCTGATTGACCAAGCCTTTT
CAGAAGTCAGGTTTACGTTTTGTCTAAATATTAATTGGTAACGAAAATAT
TTTGAACGGACGGAAGAGAACGAATCGGTTGCTACATTATTTTGAGGGTT
CTTCGGAGACACGAAAGGCCCTTGAGGTTATTATAAGGGGCAAAACTAAC
AAAACCCTAAATAAAATTGAAACAGAGTACCGTAAGTATCGGAGTCTTCG
CACACCCCCTAGACTGGCTCTCCAGGCTCGATTGCTCCACAACCCAAGAG
GATGTGAACATCGACCCGATACGTCTAAAATTCCAAAACCGCCCTTTTCG
GCATTGGCACCCTCTTGGTTGTGGAGCAATCGAGCCTGGGAAGTCAGTCT
AGGGGGTGTGTGCCACGACTCCGATACTTAGGGTACGCACCCTCCGACCT
CTTTGCCAAAATTGAAGATAGTACTTCAGTTCACTCCCCGTGTCGCGGTG
CGGGGGGAGACGTGTGCGTCGCATGGCTTTTTGCGGTGAAGGCAGCGTGT
GACGTTTTTGAGACCGAAAACATCAGCCGCCGTTTCCATCGCCTCTGACG
TGTGTAATAAGATGTTGGGTTTAGATGTGTAAATGTTTCTCCGACGGGTG
CGTATTAACGCGCAATTCTGGGTTTTGGCGTGAAGGTAACATGTGTCTTC
TTCCCTTCCCCTGTTTGTCAAGGTGTAGTATATGGTTGTAGGTGTATATG
AAGTTTGTAGGTGTTAGTGACTGTTGTATGTGTACGTTTATGCGTTTCTG
ATGCAAGTCAATGTGAAGGTGTAATTGTATGTGTTGCTGCTTTTGCAGGT
GTAAGTGTAGGAGGTGTTTGCATTTGGAGGCGTTGGGTGCATGGTGAAGG
TGTTGCTGTAGGTGTGTTCATAGTATAGTTGCGTGATTTATACCCGGTAC
AGTCGGACGCAAACAAAACTTGAGACCCAGAGAAGTCATGTGGTTGTCCT
GTTGTTTGTACTGTTGGCGGCGTTGTGGTTTATTTTATTTTATTTGATTA
TTTTCACATTTTTTTTTGTTTCCCTCATCTCCGTCTTGCGCGTTTCTCCA
TAAAACGTCTTCCGTCTGCCGCAGGAGCGTGGAGATTTATTACGCCTACG
AGGGCCCAAACGGTCACGGGGGTCTGGCGGAGGCTCTGAACGATCTTGGC
TACGCCCTTTGGGAGGCATGCGCTAGCCCCGCCTTCTCTGGCCAAGGTGA
CTCACTCACTCACTGACTCACTTATGACTGCAGCTGGTACTTGCAACATG
CCCACTTCATACCAATATATGTATGTATGGCCATCACATATAGCAGAGTA
TGGATCAACCGGGTAAGGTTGCCAATCATGCTCGTGGTCAGCTGAACAGG
GAAAATGAATATTCCCCTGTCCCCGTACGTGCGTGAGAATTTGGTCTCGC
GAGACGGGTTCAGCCGTCCCGTCCCGAGTCAGCCTGCTAATCTCCATACT
CAGGCTGAATCTGGTGCTTACTTACAGGATTCCTCCCGAGTTCCGCGGCG
GCGTCCATATATGAAACCGCCATACGCCATCGGGTCAATCCCGAGTTTAT
CGGGTCACGCAATTGCGTACCGACGGCGTTTACTGCCGAGAGTCCGCCGG
CACAGGGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGG
GAGGTCACCATGGACCAATTAATATTCGCCTCTCTTTCCCACATCCACTA
TTGGTATGAAGTGGGCATGTTGATAGTACCGGCGGTCTATGCCCGATTTG
GACACTAAACACCTGGGTATGCCTGGCTATATCCACAGTACTAGCGGCTT
CTTATTCTAGCAAAAGTCCCCTGACTGAGATTGTGCGGTCACCATGGTAC
CTAGTTGTGTTCTATGGTGGACGTTATCGGCTAGTGATATGCCGCCGGTA
CTTTCAACATGCCTACTTCATACCAATAGTGAGCATGGCGGTTATAAATG
AATAAATGGACGCCGCCGCGGAACTCGGGAGTAATCCTGTAAGTAAGCAC
CAGATTCAGCCTGTGTATGGAGATGAGCAGGCTGACGCGAGACGGGACGG
CTGAACCCATCTCGCGAGACCAAATTCTCAGGTACATGGGGACAGGGGAA
AATTCATTTTCCCTGTTGAGCTGACCATGAGCAGGATTGGCAACCTTACC
CGGTTGATCCCTATTCTGCTATATATAATGACTATACATACATACATACA
TACACACTGTACATTACTGTACGTTACTCTACATTGCTGACTTGTTAGCG
ATACTCTAGTATATACGTCAATACTGCTGTACATAACTGCAGTACATAAC
TGCATTACATTACTGCTGTACATTACTGCAGTAGCTCTTCAATCGCTCTT
CCATAGACCTTTATTTCAAAGGAAGGTGAACAATTCTATACGCAGGACGG
GGCGAGCTCGAGATTGCTCTATTATAGTTAAAAGTATTGAATGAAATGTC
AGAAAGGAGAAAAAACAATACCGAGCGGGATTAAGAAGCCCTCTACTTTC
CCTATCTCACTGTGTAAGTGTAACAGGTCGCGCTCAACTGCTGTCGCATG
CATGCGCACCTGAACCGCCGTCAGCTGCTTGTTTGTCTTGCTAACCCCGT
ATGATTTCGTACCGTAAACGTTTCGAAGGAGGAAGTTGTGCACCTGTATC
GTATCCTACCGTATCGTGCCGTAAACGTCCACAATAATCGTGTAAGGTTC
AATAAGCATGACGCCCACATGTCCACATATCATCTCGGCATCGTTCTCGG
TTATTATGCCGTTGTCCACACGTCATCGGTGTCACATACTGTTTGTACAA
TCGATTACACCGTAGTTTGTATGTAGATAATATATCCAATTATATCGTAC
CGCATCGTGAAACGCTCATCAGAGGGGGAGAAGCTGGCGTGCACCCTGGT
GGCGAACGCCGAGGAAGTGTTCCGTCTTGCTTACGAAGAGTGCGGGGAGA
ACCCCGGATACGGTCATCCCTTTGCGGCCGTCTGCCTCTCAAACTTAGCC
GACTGTGTCAGGTGAGGGTAGTAACAGTAACCGATACGTGATACTCCGTA
GTATTCATTATTAATAGTCGTATTTATTTCGCAGTACATTGTAGCCCGCG
TGGTCTAGTAGGTAATCTGTACACCTGCTAGTAGTGCGGCAGTCGTGAGT
TCGATTCTTACCAAAATAGGATTTGTGTTCTTTCTTCCTGTGTAGCGGAA
AGCGTGGGAACGTGAGTAAGTAAAATTCAGCCACTGGTCGACGAGTTGTA
AGATTGCTGAACTTGCATCGCTATAAAAAATAGTAAGGCGTGAACCGGGG
AGAGATGGGAAGATCCTTAGTGACCACAGGCATGATGGTAATGATGAGGT
CCATCGGCTATAAGTGAGATTGAAGAAGAAAAAAAAGAAGTGCATTGTCT
TGGCATGTTTTGCCATGGTTGTGATCATCGTAGGGTTTTGGAATAAAAAA
TAGGACAGCTGTCTAAACCGTTTCCGTGGGGGATAACTGAGCGCAGGGAT
GTTTTTCATCGGTTTCCTTGTTGTAAGCTGGCCACGAGCACGATCGAAGG
ATTATCAACCATAAAAAGCTCTACAGGATACAATATAATTGTAATATCGG
TTGGTGTCCAATCTGCTTGACATGTCAGCACGCCTATACATACATACATA
CAGCAGCACTCTAACTTCATGTGCTGTAATTTTTGGAAATGGTTTGTTGC
AGTATAGTATAGTAACTGACGTAGTCCTTGTTCACATGCGTGTTGGGGAA
TTCGGTTCAACAGGTCGCACGCCTGCGTGCGCCACAAATCCTCTCTGTCC
TATTGACCGTATTGCATATATTGCAGACCTTGGGTGAAAATAACTTGGAA
ACTGTTTTGGTTGGCATTTCGAATAGTATATATATATCGTGTTCCCCCCA
CCAAAATCCTGCGAAAGCATAGTCTATGCCTCTAACGCTTTTTAATTTTG
AAACGTTTTATTTTTCTCAAAAATGAAATGCAACACTAAAGTATCATAAA
GAAAATCGATAGTGTACCGATCGCCTTTCCCTGCTGCACCAAAACCCCTC
CCCCCTCCCCCCCAAAAAAAGTGCGCGTTGTGCGTACAAGAATGCGGCAG
AACTGCTCAAGCGGGCACTGAGGGTGAGGCTCATGTCCCTGGGATCGAAG
CACCTTGACACCGCGGACACCCTCCGAAGGCTAGGGGGCATTCAGCACCA
GCAGGGATATCTCGACGATGCCGAAGGATGCTATGTGTGAGAGAAAAGAC
TTGGGAAAAAAAAGACACGATACAGTTCGACTTGCTAAAATAAAAGGCTC
GAGATACTAACTGTGAAGACTAAAAAAAAAAGACTGGCTTTTACTGTACG
TATGTATGTATGGCATCACACACATAGCAAAAGCATGGTTGACCAACCGG
GTAAGGTTGCCAATCCTGCTCGTGGTCTGGTGAACAGTTGGGAAAATGAA
TATTTCCCTGTCCGCGTTCGTACGTTCTATCAAGTGTCACGTTTACTTTT
ATTAAAATGTCACGTTTTCTTTCATGCGGGGGTTTTGAAATATCACGTAC
ACGAACACTTTTTTTCGGCGTTGGAATCCACTCTGTGTTTTTAATATCTC
ATTGTTACTATACTGTATGTAGTGAAGCGTATGGATTCGAGGGCGTTTGT
AACTTACGCATTTGTCAGCCAAGTATATTTTTATAGTGGTAAATAGACGG
GGAACAGAAAAAAACTGCCGAAATTCACAGCAGAGTATGTATGTATGTAT
GTATGGTCATCACGTATAGCAGAGTATGGATCAACCGGGTAAGGTTGCCA
ATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAACATTCCCCTGTCCCC
GTGCGTGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAGCCGTCCCGTCC
CGCGTCAGTCTGCTCATCTCCATACTCAGGCTGAGTACCGTGTGCTGATA
CAGATGCTCAATCTAATGACCGAATGTAATACGCTGATCCGCCCCTCTGG
TCATCGGCAGTCGAGCCTTGAGGATCTTCGTTGATGTGCTGGGTCCAGAT
CACGAGAACGTTGGGTCCGCTCTTAACCTCCTCGCGGTCGTCGTGGGCGA
GCAGGGTCGCTATCTCGAGGTCTGTATACATGCACAAAATAAAATGTTTG
TTCGCTCAACTATACTGTGTACTGGTATGATAGTTTCCCCCCTATGTGGG
ATGCTATTTAATAACATCAACAGGTCTAGATGCGTACACATTTTTCTTCA
AAAGTGTATCGTACCGGTACATGCTCAGAAGGTCTAGATGCGTACACATT
TTTCTTTCTCCCACCTAAGCGTTTTGACATTTTCCCCCCTGTGTGTGGGA
TGCTAGTAACATAACAGGAAGGTCTAGATGCGTTCAGATTTTTCTATAAA
AATGTATCGTACCGGTACATGCTCATGAGGTCTAGATGCGTACAGTTTTT
TCTTTCAACGATCCCACCTAAGCGTTTTGTCATTTTCCCCCCTGTGTGGG
ATGTTTCAGAGTTTTCTTTATAAAGTATACAAGTGGGAAACGAGTACGTG
TGGTATTTTTATTTTGACGTTTTTTATTAAGTTTGTGGTGAACTGCTTCT
AGAAAAATATAGTAATAGAAAAAAAGACCTGCTACGAGCAATAATATTTC
AGGACCCAGGCAATACGAGGAGTTGTACACAAAAAACGATTGCGAGCATG
TATGGTCACACATACAGCAAGAGTATGATCAACCGGGTAAGGTTGCCACT
CCTGCACGTGGTCAGCTCAACAGGAAAAATGAATATTTCCCTGTCTGCGT
TCGTGCCTGAGAATTTGGTCTCTCAAGACGGGCTCGGCCTCTCCGTCCCG
CGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACG
GGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATTCATTTATAACCAC
CATACGCCATCGGGTCAGTCCCGAGGTTATCGGGTCACGCAATTGCGTAC
CAATGGCGTTCACTGCCGAGAATCCGCCGGCACAGGGCCAGTAAACCTCA
AGGTAGTTTCGAACGAGTGCTGCCTTGGGAGATCACCATGGACCAATTAA
TATTCGCCTCTCTTTCCCACACCCACAATTGGTATGAAGTGGTTATATTA
ATAGTCATAGCATGTTGAAAGTACATAACTCCTCATACTGTTCCGTACAT
AATTCTGCTGAATGTGCTGGCTATACATCAACGCATATACACAGCTCTGC
TGAATGTGTTGGCTATTTAGACTATAAACGTAGATACATAACTCTGCTGA
ATGTGCTGGCTATACATAAACGTATATACTTTTTCGATAGGCGGAAAATT
TCCATCGACGAGCCCTCTCACAGCGTCGGAACGCGGGCGCCCGCGGT back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1106:64682..76228+ >mRNA_A-nodosum_M_contig1106.2.1 ID=mRNA_A-nodosum_M_contig1106.2.1|Name=mRNA_A-nodosum_M_contig1106.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1644bp|location=Sequence derived from alignment at A-nodosum_M_contig1106:64682..76228+ (Ascophyllum nodosum dioecious)
ATGTCGGGCAGTTTTTGCAGCAGCACCGGTGACGGCGGCGGCGGAGGGAG
GGGATTCGTCGTCGGCAGCGACTGTGGCCTCTCCCCTGTTGAGCATGATA
GCTGCAGAGGCAGGAGAAGAAAAGGTGATGACGATGATGTAGCGGGGGGA
GAAACGGTGGTGGTTGGGGATCGAGGCGAAGGCGTCGCCGCCGCGTCCGC
CTCCCGGCGGGGCAAGGGGGGATTCACCGCCGACCCCGTTTCGTTCTTGT
CTTCGCCATCATCTTCGATGCCGTCATTGGTCGAGATGGCACGGTCCTCG
GGCGGGTGCAGAGATTCCGCGATAGCCTTCTCGTCGTCGCCGCTGCTTAG
TGGAAAATTTGGGGGCGCGGGCTCGGGCGGCAAGGGCTCGGTTGCGCCCT
TGTCGTCATCGTCGAGTTTCCACGTGGATGTCCCGCGTGGCGGGGGGGCA
TCAGGGGCGATGCTACGCCCATCGTTGCAGGTCAGAGGAACGGTTCCGGG
CGGCGGTGGACTCGAGACTGGCGAAGGAAAGTCGGGAGGCAAACTGCTAC
ACGCTACAGCAGCACCAGCAGCAGCAACAAGAACATCAGCCACTCGAAAC
GATCGAGCAGGGGGGGAAAGGGCCGGTGCCAGCAGAAACGTCGTTCCTTC
TCCACCCGCCTTGAACGATCCTCGGAGCAGGCCAGTCGCCGAGGTAGCAC
GGGCGGCCCCCAAGCCACGGGACGGTCCGGGGAGGCGTTGCAGAACGGGG
AAGACGATGCACGATGGTGCTCGCGGCGGCTGGGTTGACGATGACGTGAA
AGTTGAAGTTGACGTGGGTGTGGATGCGTCTCCTAAGAGCAAAGGTGCTG
GATCTGGAAGAAAGTTGGACGGAGCCACGGCGTTTTCGTCCGCCCAACGA
AGGAACGGAGGCGTTACTGCTACTGCTACCAGCAGTGTTCGCGGGGCGTG
GAGGTGGTACGATCGTCCCAACGTGGCCAAGCTGCTCAACGACATCGCTG
ACGCCATGTTCGCCCACGGCTATCGGGACCAAGCGGCGGACCTATTCGAG
AGGAGCGTGGAGATTTATTACGCCTACGAGGGCCCAAACGGTCACGGGGG
TCTGGCGGAGGCTCTGAACGATCTTGGCTACGCCCTTTGGGAGGCATGCG
CTAGCCCCGCCTTCTCTGGCCAAGAGGGGGAGAAGCTGGCGTGCACCCTG
GTGGCGAACGCCGAGGAAGTGTTCCGTCTTGCTTACGAAGAGTGCGGGGA
GAACCCCGGATACGGTCATCCCTTTGCGGCCGTCTGCCTCTCAAACTTAG
CCGACTGTGTCAGTGCGCGTTGTGCGTACAAGAATGCGGCAGAACTGCTC
AAGCGGGCACTGAGGGTGAGGCTCATGTCCCTGGGATCGAAGCACCTTGA
CACCGCGGACACCCTCCGAAGGCTAGGGGGCATTCAGCACCAGCAGGGAT
ATCTCGACGATGCCGAAGGATGCTATGTTCGAGCCTTGAGGATCTTCGTT
GATGTGCTGGGTCCAGATCACGAGAACGTTGGGTCCGCTCTTAACCTCCT
CGCGGTCGTCGTGGGCGAGCAGGGTCGCTATCTCGAGGCGGAAAATTTCC
ATCGACGAGCCCTCTCACAGCGTCGGAACGCGGGCGCCCGCGGT back to top
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