mRNA_A-nodosum_M_contig11.30.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 158 bits (399), Expect = 6.300e-43 Identity = 75/121 (61.98%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 1 YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEATIKRIGLATRAFPGSHTANDVQYWLKKITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGIA 363
Y GPFL Q+DLTT AG EYITF+ + + G+ + RI LA RAFPGSHTA D+Q W++K+T E+FS +G V+PSDVFLAFTVDQG N++NA AL V VV CN HRLNT V W LGIA
Sbjct: 88 YSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIA 208
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 158 bits (399), Expect = 1.670e-42 Identity = 75/121 (61.98%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 1 YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEATIKRIGLATRAFPGSHTANDVQYWLKKITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGIA 363
Y GPFL Q+DLTT AG EYITF+ + + G+ + RI LA RAFPGSHTA D+Q W++K+T E+FS +G V+PSDVFLAFTVDQG N++NA AL V VV CN HRLNT V W LGIA
Sbjct: 283 YSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIA 403
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 156 bits (394), Expect = 3.100e-42 Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 1 YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEATIKRIGLATRAFPGSHTANDVQYWLKKITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGIA 363
Y G FL Q+DLTTVAG EYITF+ S + G+ + R+ LATRAFPGSHTA+D++ W++ +T E+F++L+G VE DVFLAFTVDQG NVVNA AL VPVV CN HR+N+ V W LGIA
Sbjct: 92 YGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIA 212
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 156 bits (395), Expect = 5.710e-42 Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 1 YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEATIKRIGLATRAFPGSHTANDVQYWLKKITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGIA 363
Y G FL Q+DLTTVAG EYITF+ S + G + R+ LA RAFPG+HTA+D+ W++++T+E+F++ +G VEP DVFLAFTVDQG NVVNA +AL VPVV CN HR+NT V W LGIA
Sbjct: 281 YSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIA 401
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 154 bits (388), Expect = 2.110e-41 Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 1
Query: 1 YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEATIKRIGLATRAFPGSHTANDVQYWLKKITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGIA 363
Y G FL Q+DLTTVAG EYITF+ S + G+ + R+ LATRAFPGSHTA+D++ W++ +T E+ ++L+G VE DVFLAFTVDQG NVVNA AL VPVV CN HR+N+ V W LGIA
Sbjct: 92 YGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIA 212
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.190e-39 Identity = 76/128 (59.38%), Postives = 92/128 (71.88%), Query Frame = 1
Query: 1 YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEATIKRIGLATRAFPGSHTANDVQYWLKK--------ITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGI 360
Y GPFL Q+DLTTVA EYITFS S I TI R+GLATRAFPGSHTA D++ W++K +T E+F++++G V+P DVFLAFTVDQG NVVNA L+V V+ CNAHRLN+V W LGI
Sbjct: 263 YVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGI 390
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.080e-38 Identity = 70/122 (57.38%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 1 YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEAT-IKRIGLATRAFPGSHTANDVQYWLKKITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGIA 363
Y G FL +DLTTVA EYITF+ S + G+ + R+ LATRAFPGSHTA D++ W++ +T E+F +L+G V+P DVFL FTVDQG N+VNA AL VPVV CN HR+N+ V W LGIA
Sbjct: 88 YGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIA 209
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: D7G7X8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X8_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 7.580e-16 Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 91 GEATIKRIGLATRAFPGSHTANDVQYWLKKITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGIA 363
G++ + LAT+ F G HT ++ WL+++T F +V V PSDV++A TVDQGLNVVNA ++L +P + C HR+++ V W +G++
Sbjct: 53 GDSLPVHLSLATKVFRGQHTQATIKTWLEQLTTGVFQSIVP-AVVPSDVYVAATVDQGLNVVNACKSLGIPTIPCLGHRIHSSVMWGIGVS 142
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.680e-15 Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 178 KITQEWFSELVGNRVEPSDVFLAFTVDQGLNVVNAVEALNVPVVVCNAHRLNTVVCWMLGIA 363
++T+E+F +G VEPSDVFLAFTVDQG NVVNA AL V VV CN HR+N+ V W LGIA
Sbjct: 6 QLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIA 67
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 3.440e-15 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEATIKRIGLATRAFPGSHTANDVQYWLKK 180
Y GPFL Q+DLTT AG EYITF+ + + G+ + RI LA RAFPGSHTA D+Q W++K
Sbjct: 1367 YSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEK 1426 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11.30.1 >prot_A-nodosum_M_contig11.30.1 ID=prot_A-nodosum_M_contig11.30.1|Name=mRNA_A-nodosum_M_contig11.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=121bp YKGPFLSGQVDLTTVAGAEYITFSASNIPPGEATIKRIGLATRAFPGSHTback to top mRNA from alignment at A-nodosum_M_contig11:373345..373882- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11.30.1 ID=mRNA_A-nodosum_M_contig11.30.1|Name=mRNA_A-nodosum_M_contig11.30.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=538bp|location=Sequence derived from alignment at A-nodosum_M_contig11:373345..373882- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11:373345..373882- >mRNA_A-nodosum_M_contig11.30.1 ID=mRNA_A-nodosum_M_contig11.30.1|Name=mRNA_A-nodosum_M_contig11.30.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=363bp|location=Sequence derived from alignment at A-nodosum_M_contig11:373345..373882- (Ascophyllum nodosum dioecious)back to top |