mRNA_A-nodosum_M_contig1096.26.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1096.26.1
Unique NamemRNA_A-nodosum_M_contig1096.26.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: D7FP41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP41_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.280e-22
Identity = 111/307 (36.16%), Postives = 135/307 (43.97%), Query Frame = 3 
Query: 1845 GCGLPQATVENEYSRPRLHHRAPLVPASPGGRSRGVSGSGDPPVRRSKRKVESTHATRTPERNLPDEQRESLDRGARSQDDSAASGVIMSDGDGGGKSCEGSDGKGDDNSDAKWSXXXXXXXXXXXXXXXGGDDQRIAISGPGRERGDREVTSGDGIIDAGQRTETGASTGASTLGADNVPTTSATTPAAIEGGGGEKQSAVVDHPEPDLANEEKRALDGTQQRRRRSTFPDGKKPG---PQRAVGYPISAVSAVLRQLHMRVLSDEEMTMLDKVTGEGVAEHLVEMRTILDEQKQRLEMKIRSLQD 2756
            G   P+  VEN+YSRPRLHHRAP V  S  G   GVS +   PVRRSKRKVES HAT  PE    ++QR+    GA S D                                                         A+S        R+  SG                                         G                 EK A+   Q RRR+ST  DG++ G    QR +GYP+++ +AVLRQLHMRVLS EEM MLD+VTGEG+AEHLVEMRTIL++QK+RLE+KIRS+ D
Sbjct:  900 GSKRPKPAVENDYSRPRLHHRAPPVAPSTLGAGGGVSTA---PVRRSKRKVESMHATPQPEGVTAEDQRQQQTTGAVSSD---------------------------------------------------------ALS--------RDTRSG-----------------------------------------GXXXXXXXXXXXXXXXXXEKGAVK-VQPRRRKSTSLDGERRGGGAQQREMGYPMTSGAAVLRQLHMRVLSVEEMKMLDQVTGEGIAEHLVEMRTILEDQKRRLEIKIRSMHD 1096
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BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: A0A6H5KSV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV1_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 9.420e-22
Identity = 114/307 (37.13%), Postives = 137/307 (44.63%), Query Frame = 3 
Query: 1845 GCGLPQATVENEYSRPRLHHRAPLVPASPGGRSRGVSGSGDPPVRRSKRKVESTHATRTPERNLPDEQRESLDRGARSQDDSAASGVIMSDGDGGGKSCEGSDGKGDDNSDAKWSXXXXXXXXXXXXXXXGGDDQRIAISGPGRERGDREVTSGDGIIDAGQRTETGASTGASTLGADNVPTTSATTPAAIEGGGGEKQSAVVDHPEPDLANEEKRALDGTQQRRRRSTFPDGKKPGP---QRAVGYPISAVSAVLRQLHMRVLSDEEMTMLDKVTGEGVAEHLVEMRTILDEQKQRLEMKIRSLQD 2756
            G   P+  VEN+YSRPRLHHRAP V  S  G   GVS +   PVRRSKRKVES HAT  PE    ++QR       R Q    A+G + SD                                              A+S        R+  SG                                       G                   EK A+   Q RRR+ST   G++ G    QR V YP+++V+AVLRQLHMRVLS EEM MLD+VTGEG+AEHLVEMRTIL++QK+RLEMKIRS+ D
Sbjct:  994 GSKRPKPAVENDYSRPRLHHRAPPVAPSTLGAGGGVSTA---PVRRSKRKVESMHATPHPEGVTAEDQR-------RQQ----ATGAVGSD----------------------------------------------ALS--------RDTRSG---------------------------------------GXXXXXXXXXXXXXXXXXXSEKGAVK-VQPRRRKSTSLGGERQGEGVQQREVEYPMTSVAAVLRQLHMRVLSVEEMKMLDQVTGEGIAEHLVEMRTILEDQKRRLEMKIRSMHD 1192
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BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: A0A0B6YTE9_9EUPU (PHD-type domain-containing protein (Fragment) n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YTE9_9EUPU)

HSP 1 Score: 57.4 bits (137), Expect = 7.000e-6
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 3 
Query:    6 CDDEYHTYCLVPPLGEVPKGKWFCDKC 86
            CDD +HTYCLVPPL EVPKG+W C  C
Sbjct:   35 CDDAFHTYCLVPPLSEVPKGEWRCPSC 61
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BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: A0A0S7FLG4_9TELE (KD5BB (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7FLG4_9TELE)

HSP 1 Score: 58.5 bits (140), Expect = 1.160e-5
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3 
Query:    6 CDDEYHTYCLVPPLGEVPKGKWFCDKCKA 92
            CDD YHT+CL+PPL EVPKG W C KC A
Sbjct:  138 CDDSYHTFCLIPPLHEVPKGDWRCPKCLA 166
[Close]
BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: A0A671RFK2_9TELE (PHD-type domain-containing protein n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671RFK2_9TELE)

HSP 1 Score: 57.4 bits (137), Expect = 1.910e-5
Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 3 
Query:    6 CDDEYHTYCLVPPLGEVPKGKWFCDKCKA 92
            CDD YHT+CL+PPL +VPKG W C KC A
Sbjct:   30 CDDSYHTFCLIPPLQDVPKGDWRCPKCVA 58
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BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: A0A7S2CHR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHR1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.990e-5
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 3 
Query:    6 CDDEYHTYCLVPPLGEVPKGKWFCDKCKAK 95
            CDDEYH YC+ PPL  +P+G WFC KC+ K
Sbjct:  107 CDDEYHVYCVDPPLERIPEGDWFCSKCELK 136
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BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: A0A1B6H9B4_9HEMI (PHD-type domain-containing protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6H9B4_9HEMI)

HSP 1 Score: 56.6 bits (135), Expect = 2.250e-5
Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 3 
Query:    6 CDDEYHTYCLVPPLGEVPKGKWFCDKCKA 92
            CDD YHT+CL+PPL E+PKG W C KC A
Sbjct:   70 CDDSYHTFCLMPPLLEIPKGDWRCPKCVA 98
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BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: A0A401PQ79_SCYTO (PHD-type domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401PQ79_SCYTO)

HSP 1 Score: 57.4 bits (137), Expect = 2.720e-5
Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 3 
Query:    6 CDDEYHTYCLVPPLGEVPKGKWFCDKCKA 92
            CDD YHT+CL+PPL +VPKG W C KC A
Sbjct:  138 CDDSYHTFCLIPPLQDVPKGDWRCPKCLA 166
[Close]
BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: UPI00096B55CD (LOW QUALITY PROTEIN: lysine-specific demethylase lid n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B55CD)

HSP 1 Score: 61.2 bits (147), Expect = 2.830e-5
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 3 
Query:    6 CDDEYHTYCLVPPLGEVPKGKWFCDKCKA 92
            CDD YHT+CL+PPLGE+PKG W C KC A
Sbjct:  337 CDDSYHTFCLIPPLGEIPKGDWRCPKCVA 365
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BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Match: A0A2I2YCF3_GORGO (PHD-type domain-containing protein n=3 Tax=Primates TaxID=9443 RepID=A0A2I2YCF3_GORGO)

HSP 1 Score: 57.4 bits (137), Expect = 3.090e-5
Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 3 
Query:    6 CDDEYHTYCLVPPLGEVPKGKWFCDKCKA 92
            CDD YHT+CL+PPL +VPKG W C KC A
Sbjct:   97 CDDSYHTFCLIPPLHDVPKGDWRCPKCLA 125
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP41_ECTSI1.280e-2236.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSV1_9PHAE9.420e-2237.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0B6YTE9_9EUPU7.000e-674.07PHD-type domain-containing protein (Fragment) n=2 ... [more]
A0A0S7FLG4_9TELE1.160e-572.41KD5BB (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A671RFK2_9TELE1.910e-568.97PHD-type domain-containing protein n=1 Tax=Sinocyc... [more]
A0A7S2CHR1_9STRA1.990e-563.33Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A1B6H9B4_9HEMI2.250e-568.97PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A401PQ79_SCYTO2.720e-568.97PHD-type domain-containing protein (Fragment) n=1 ... [more]
UPI00096B55CD2.830e-572.41LOW QUALITY PROTEIN: lysine-specific demethylase l... [more]
A0A2I2YCF3_GORGO3.090e-568.97PHD-type domain-containing protein n=3 Tax=Primate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1096contigA-nodosum_M_contig1096:177467..184533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FP41
PFAMsBromodomain,DDT,PHD
Model size6089
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue9.11e-24
EggNOG OGsKOG1473@1|root,KOG1473@2759|Eukaryota
Descriptionmethylated histone binding
Cds size3525
COG categoryJ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866479.669543-UTR-A-nodosum_M_contig1096:177466..1785661680866479.669543-UTR-A-nodosum_M_contig1096:177466..178566Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1096 177467..178566 +
1680866479.8224792-UTR-A-nodosum_M_contig1096:183069..1845331680866479.8224792-UTR-A-nodosum_M_contig1096:183069..184533Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1096 183070..184533 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866479.793938-CDS-A-nodosum_M_contig1096:178566..1794601680866479.793938-CDS-A-nodosum_M_contig1096:178566..179460Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1096 178567..179460 +
1680866479.8038878-CDS-A-nodosum_M_contig1096:180007..1806701680866479.8038878-CDS-A-nodosum_M_contig1096:180007..180670Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1096 180008..180670 +
1680866479.8136868-CDS-A-nodosum_M_contig1096:181101..1830691680866479.8136868-CDS-A-nodosum_M_contig1096:181101..183069Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1096 181102..183069 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1096.26.1prot_A-nodosum_M_contig1096.26.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1096 178567..183069 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1096.26.1

>prot_A-nodosum_M_contig1096.26.1 ID=prot_A-nodosum_M_contig1096.26.1|Name=mRNA_A-nodosum_M_contig1096.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1175bp
MATIVTAEVASKPETDVSAQAAVLRVSRSPLMVGSSSPKRSSPAAVGEIL
DSGDAATSLEPHTPAGDGTDPAASVSERPTERRKQQSQDLGEIEVTVTDE
NDGGEDDGSPRPRDAETTSLSSTPRLSMSVPPPAKRVVEPKTRRSHHRKI
HPPPEEEELVDGRKFKRRRESAPAAMATPDTRAFAGSRVGDANNDGDGDD
DSNDRAAGGERGSARQARVTISSSGPARAKEGVVRGRGRTRSRGTRPLGC
GLPQATVENEYSRPRLHHRAPLVPASPGGRSRGVSGSGDPPVRRSKRKVE
STHATRTPERNLPDEQRESLDRGARSQDDSAASGVIMSDGDGGGKSCEGS
DGKGDDNSDAKWSDGGGVDGSGSNGGGAGGDDQRIAISGPGRERGDREVT
SGDGIIDAGQRTETGASTGASTLGADNVPTTSATTPAAIEGGGGEKQSAV
VDHPEPDLANEEKRALDGTQQRRRRSTFPDGKKPGPQRAVGYPISAVSAV
LRQLHMRVLSDEEMTMLDKVTGEGVAEHLVEMRTILDEQKQRLEMKIRSL
QDDSRDDIDADSASGDQSQGEEQQQQPQNNGVVDNSRQPTPGHPESALLE
DRGGCDATDRAEEGVSVNPVAASAAGSAAAVTASAPHAAAPTTGANAAAV
TALATPGQFDQSAEGVAMDCNPHVSAVQGNVAAAAAASASLRYLGPPPAV
AGPTVVSSAEQSPSLAPLGGASAPAQGGAPFHMGTPFHHAIQAVTPLLPA
EGDHQMRLVQHQGATNGVWLGQTTAHGALLSPNNTVCANNQKFLFQGHEW
AAAAAAAAAAPTPLPPTPHGGTVPPPPAEFAPPAGFMPPVSSLPLSSFPS
SIPLAPLGWPQAMLSGGAPPAEMMGVAGAKESGYALGGGREGHSRVLDIA
KRGEAGKLTEAEAAAMAAGWRYYHDSVKTQQSVQLVSVGGRSGHHDHIEG
GRNGTREDAAVGGDGGACAAEDEDSEEEGSGGAARCSPMLGRSVGLGGAR
AARSGKSGRGLENLKLKARSRGDSLGGEINGINGPARGVSGGVEKSLERA
TPTVPSLVDRQTSSSGPPVGFAAPAAATQGVRRVEQQLGDTRGSQPGGSD
SYAPGVRRGDAGDAPVARMGNPAVVTSVAINGGRGSDQGDAAASRGLEEQ
APTLAPVVDDQRRKMAAQAMLSFR*
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mRNA from alignment at A-nodosum_M_contig1096:177467..184533+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1096.26.1 ID=mRNA_A-nodosum_M_contig1096.26.1|Name=mRNA_A-nodosum_M_contig1096.26.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7067bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:177467..184533+ (Ascophyllum nodosum dioecious)
AGCACTGCGACGACGAGTACCACACGTACTGTCTGGTGCCACCCCTGGGT
GAAGTACCCAAGGGGAAGTGGTTCTGCGACAAGTGCAAGGCAAAGGGCTA
CGACACGTCCGACGCCAGGAGCCGCAGCGGAGGCAAGGGTAAAGGCGGTC
AGGACGGAGTCGGAGTAAGAGGCTCCAAGGTAGCGGCCTCAAAGAGCGCC
GCTGCTGCCGCACCCGTGGTGGCGACCCGAGCTTCCCCCCGGGCAGCTGC
TGCCGCCGCCGCAGCAGCAGCAGGGAACAGAGATGTTGCGTCTACAGGAG
GTAAGGGGCGTCCGCGATCCCCAGAAAAGAGATCCGCTTCAAGTGACTTA
AATCTTGCAGCCGAAGCGAGGGCTGGAGGGGGGCAGGCTAAGACGGCAGA
TGTTAGGGACGGCGGGGCCTCTCCGCCGGGTAGCGGGCATAATGGTAAGC
ACGTCTCCGCCGCTGCTCATTCTACTGGTGCTGCAGACGCTTCTTCGGCT
GGGCCGAGTGGAAGTCCTAATCTAAGGTCGGGTAGGCCGGGCCGGTCAAC
AGCAGCGACGAAAGCTGCTCAGTCAGGCACAGACAGCACCGTTGAACCGG
CAAGTCCGCAGCCAGACCTTGCGGAAAGTCGACCCACGAGTACCGCGAGC
AGGACCGGACGACCATTGAATGTCGAGACTCGTCGCACAAGCCGAACTCC
CCCGATCGGTGGGAGGGTAGGGAAAGGCTCGCGATGTACCCGTGGAGGCT
CTGCGCCCCCCTCCGCGGGCGAGCGTCACGACTCTCCGGTGAGGACCCGA
GGGGGAGGGCGCCCGGCAGTAACCTCCCAGGTGGAGCGTAGCCGTTCCGC
CGGGCGGGGCGTGGGGGAACAAGGAGGCGGTGGCAGTGATGATATCTTGA
CGAGGAGCATAGCTACCGGTGGGAGCGGAAGGGGCCGAAACGGAAAGGGC
GGCGCGTTTGTGCACGAAGGGACGACTCCGAACGAAGCGCAGGCGCACAC
GCAACCCGCCTCGGTTCCACCCGCAACGGGGTCGAACCCTGCGGAGGATA
GCAGACGGAAGAAGAAAAGGGTGGTGGTGGTGACGGCGGGTGAGCCCGCG
ATGGCGACGATCGTAACGGCGGAAGTGGCGTCGAAACCGGAAACGGATGT
GAGCGCACAAGCAGCAGTTCTACGAGTATCGCGGTCACCGTTGATGGTTG
GATCTTCCTCGCCGAAGAGATCGTCGCCGGCGGCGGTGGGTGAGATTTTG
GACAGCGGCGACGCGGCAACAAGTTTGGAACCTCACACGCCCGCCGGGGA
CGGGACTGACCCTGCTGCGTCTGTTTCGGAGCGCCCGACGGAGCGGCGAA
AGCAACAGTCTCAGGACCTGGGGGAAATAGAGGTCACTGTAACGGATGAG
AACGATGGCGGCGAGGATGACGGATCACCGCGCCCCCGTGACGCGGAAAC
CACATCCTTATCTTCTACCCCTAGGCTTTCGATGTCGGTGCCGCCGCCCG
CAAAGAGAGTCGTGGAGCCGAAGACTCGACGGTCTCACCACAGGAAGATC
CACCCTCCACCGGAGGAGGAGGAGCTCGTGGACGGGCGGAAGTTCAAGCG
AAGGCGAGAAAGCGCCCCGGCAGCGATGGCGACGCCGGATACCCGCGCGT
TCGCGGGCTCGCGCGTGGGTGACGCTAACAACGACGGTGATGGTGACGAT
GACAGCAACGATCGCGCAGCTGGAGGAGAACGAGGCTCGGCGCGGCAGGC
GCGCGTGACGATATCCTCCTCCGGGCCCGCCAGGGCGAAGGAAGGAGTGG
TCAGGGGCAGAGGCAGAACAAGGAGCAGGGGTACCCGGCCGCTGGGGTGC
GGCCTCCCACAAGCGACCGTGGAGAACGAATACAGCAGACCCAGGTTGCA
TCACCGCGCTCCGCTGGTTCCCGCTTCGCCGGGTGGTCGGAGTCGAGGCG
TCTCGGGGAGCGGGGATCCTCCCGTGCGGCGTTCGAAGCGTAAGGTCAGT
ACGTTCATTTCATTCATTTCTGTTTTTTTTTTTGGTGTGGGTGTGCGGGG
ATAACAAAAGACCAAACCCATCCATGCCGATTGAGTTGAGCACTTGCTGA
ATGAAATCTGACCCATGGGCATCCAGGCACCTGTCTTTGAACCATTGTCG
TCGTCCAACCCGGCGTCTCTCAGACGCTCTGTTGTCCGTGCCCCTTTTGT
TGGACTAAAATGGTTCGGTGTCGTAACGTGCGGGTATCCCTCGAAGTAGT
GTGAAAAAGGAGAGAGGAATGAACAACAAAATCCACTATAATAGCAGCGA
AGTTGCCACTGACAGGCATTTCCCAGTTTTTGCTCTTGATCCTCTTTTCC
CCGTTTTCTTGTCCTTTTTTTCGCGGCATTTGCGACTGCGGTTGCGGCGA
CTGTGGCTTAGCCCGGCACTCTTAACCTGTCACGTTTGCCCTTCGCTCTC
CCCTACCACTCCCACGATAAACGACTCTTAAATGTCCCTTGCCCTGCCCT
CCCCCCCGTATTTCCAAAAACGCGTCCTTATCGATGCACAGGTCGAGTCA
ACTCATGCCACCCGCACTCCCGAGAGAAACCTCCCGGACGAGCAGAGGGA
GAGTTTGGACAGAGGTGCTCGATCGCAGGATGATAGTGCTGCCTCGGGAG
TGATAATGAGTGATGGCGACGGCGGCGGTAAGAGTTGTGAGGGCAGCGAC
GGAAAGGGCGATGATAACAGTGACGCGAAATGGAGTGATGGCGGCGGTGT
CGATGGCAGTGGCAGCAACGGTGGCGGTGCCGGCGGAGACGATCAACGTA
TAGCAATCAGCGGACCCGGCCGCGAGAGAGGTGATCGCGAAGTCACAAGT
GGTGATGGCATCATCGACGCGGGTCAACGCACAGAAACAGGCGCAAGTAC
AGGGGCAAGCACGTTAGGGGCGGACAATGTACCAACCACATCCGCTACGA
CGCCCGCGGCCATTGAAGGCGGCGGTGGCGAGAAGCAGAGTGCTGTCGTG
GATCACCCTGAGCCAGATCTCGCCAACGAGGAAAAACGGGCCCTCGATGG
TACGCAGCAGCGGCGTAGGAGGTCGACATTTCCGGACGGGAAGAAGCCGG
GACCGCAACGTGCTGTGGGATACCCGATATCAGCTGTGTCTGCGGTGCTG
CGTCAGCTTCACATGCGTGTGCTAAGTGATGAGGAGATGACGATGCTAGA
CAAGGTCAGGCGATCAAAGTCTAAAGATGTTTGAGCGCGCGCGTGCGCGC
GCTTTCCGGCCCCCGTGAGACGGTTGAGATGGTTACGAACGAATTACTTG
TTTTTAATCTTGCGCGATACACGCATATCGTCGCGGTCTGAACGCGTTGC
GATTGGGAAGACCGGCCCGCGTTTCACCGCCTCCCGTGATGCGGACAGGT
GTCGTCAGGCATGCTGTGTTCGCGTGATATCTCCGCTGATGTACGTATTC
CTGCTCCCACTTACGTGTTTGTTTTACGACAATGTATTTAAACTTCAGCC
TCGTCGAACACACTAGACGAAATATTTTCTGACCCAACGTTAGAGGCCAA
CACGCCCCACCGCGGCGCTCGTGTTCCCTTCCAGCCGTGACCCCCAAACA
CGTACGTACCCATGACCCTTTTATCGTGGCGCCAGGTCACAGGGGAGGGC
GTGGCAGAGCATCTGGTGGAGATGCGAACAATCTTGGACGAGCAGAAGCA
AAGGCTGGAGATGAAGATCCGCAGCTTGCAGGACGATTCTCGCGATGACA
TCGACGCCGACAGCGCAAGCGGTGACCAAAGCCAAGGGGAGGAGCAGCAG
CAGCAGCCACAGAACAACGGCGTCGTTGACAACTCGCGACAGCCCACGCC
GGGACACCCGGAATCGGCGTTGTTGGAAGACCGTGGCGGTTGTGACGCCA
CAGACCGCGCGGAGGAAGGAGTGTCTGTGAATCCAGTTGCTGCCTCTGCT
GCCGGTTCTGCTGCCGCTGTGACTGCTTCTGCGCCTCATGCCGCTGCTCC
GACTACTGGAGCTAATGCTGCCGCTGTCACTGCCCTGGCGACGCCCGGCC
AGTTTGACCAGAGTGCAGAGGGTGTCGCGATGGATTGTAATCCACACGTG
TCCGCAGTTCAGGGGAACGTTGCAGCCGCGGCTGCGGCGTCAGCAAGCCT
ACGGTACCTTGGACCGCCGCCGGCGGTCGCCGGGCCCACCGTCGTTTCCT
CAGCCGAGCAATCGCCTTCGCTGGCGCCGCTTGGTGGCGCCTCCGCCCCT
GCTCAAGGAGGCGCGCCGTTTCATATGGGCACGCCTTTCCACCACGCAAT
TCAGGCGGTTACACCTCTTTTGCCTGCAGAAGGCGACCACCAAATGCGAC
TGGTCCAACACCAGGGGGCTACGAACGGAGTATGGTTAGGTCAGACGACG
GCGCACGGGGCCCTGTTGTCGCCGAACAACACCGTCTGCGCTAACAACCA
AAAGTTTCTTTTCCAAGGACACGAGTGGGCGGCCGCGGCTGCTGCAGCTG
CTGCTGCTCCTACCCCTCTTCCCCCAACCCCACATGGAGGTACCGTGCCC
CCGCCACCGGCAGAGTTTGCACCACCTGCGGGTTTTATGCCTCCAGTTTC
GTCGCTACCGCTGTCATCATTTCCGTCATCGATCCCGCTAGCGCCGCTGG
GCTGGCCGCAGGCGATGCTATCCGGTGGTGCGCCGCCCGCAGAGATGATG
GGCGTGGCGGGAGCTAAGGAGAGTGGATACGCATTAGGGGGTGGACGGGA
AGGACACTCTCGGGTGTTGGATATTGCGAAGCGCGGTGAAGCGGGCAAGT
TGACGGAGGCTGAAGCAGCAGCGATGGCGGCGGGCTGGCGGTATTACCAC
GACAGTGTGAAAACGCAACAGTCTGTTCAACTAGTATCGGTAGGAGGGAG
AAGTGGCCACCACGATCACATCGAGGGCGGACGAAACGGGACGCGCGAGG
ACGCTGCGGTGGGTGGTGACGGTGGGGCTTGTGCGGCAGAAGACGAAGAT
TCGGAGGAAGAGGGCTCAGGAGGAGCGGCTCGATGCTCGCCAATGTTGGG
GCGATCTGTCGGACTGGGTGGTGCAAGAGCCGCACGCAGTGGCAAGTCAG
GAAGGGGTCTCGAAAATCTCAAGCTCAAGGCAAGATCCCGGGGCGACTCT
CTCGGTGGGGAAATCAACGGCATCAACGGTCCCGCGAGAGGTGTGAGCGG
GGGCGTCGAGAAGTCTCTTGAGCGGGCGACGCCGACGGTTCCTTCTCTTG
TCGACAGACAAACCTCCTCAAGCGGGCCCCCCGTAGGCTTCGCCGCGCCA
GCGGCAGCTACCCAGGGAGTTCGACGTGTAGAGCAGCAGTTGGGCGACAC
CCGAGGCTCCCAACCCGGGGGCTCCGACAGTTACGCCCCTGGTGTTCGTC
GGGGAGATGCTGGGGACGCACCTGTGGCACGGATGGGTAACCCAGCAGTG
GTTACTTCGGTGGCCATCAACGGCGGTAGGGGCAGCGACCAGGGTGACGC
AGCAGCCAGCAGGGGGCTGGAGGAGCAAGCTCCAACCCTGGCGCCGGTTG
TCGACGACCAGAGGCGAAAGATGGCGGCTCAGGCCATGCTGTCGTTCCGA
TAAGCAGGAGCATCCCGCGTGTTTGGGAGCGGCGTAGGTTGGAGAGGGGG
AGGGGTCGGCCATCGTTCGTGGTGCTCCTGTCTCATGGTTTCGGTTGAGC
AAGCGTAGGGTTGGCGGGGAGGGGGAGGGGGTGACTCCAGTGAAATGTGT
CGAGCGTCCCCGACACCCTTGACGCCGGCGCTGTGTGGAAGAGGAGTTTG
TTCCACGTGGGCTACCATGAAGCGAGCGCCAAATCTACGTTGCGATGGCA
ATGTTGCACGTTTAATATTGAAATCCTACGCCGGATGGAGGGGCTATAAA
AGAAGGGCGACAAGGGCGGGTCTAATGGTTCAGCGCCCAGCGAAAATAAC
AAGCGGTAGAGTGGAGGGCGGGGCAGATGAGATGTACATGTTGGCGTCCG
TTTTGGTGAAAGAAGTCGCTTTTGTCAAAAGATTACGATCAGTGGGTGTG
TACAGTGTACCTGGTTGTGTCTGTCCTGATCTTGCGTGTGCGTGGTTGGT
GTGGTGGTGCAGCATGTTATGTGTGTTGTGCGTGTTGTGCTTGCTCCATT
CAACCAGATGGGAGGTGTCACGAGGTCACGCGTGAACCGTGTCGTTTTTC
TGTTGTTTATTTTTTCTATATATTTTTAGCTCCGTTTCAAATAAAAAAAG
GGAAAAACAAGCAAAAAAAAAACAGTATTCCTTAGAATAAGCATAATTCG
AACAGGTATCTCGATCCCCCGACAGGCAGAGGCACGCGTCTTGAGTTTTT
GCGCCGCCTTGATCGAGTGTCCTGTTATGCTGCCGCTGCTTCCACGCCCA
CCGTATAGGCACATGTACTACGGCTTTCACTACTTCGTAGTAGCGAACAC
TAAAGTGTCTTCTGATTGGTCAATCAAGTGCCCTCGGGGTGTGATCATCA
CTCTTTCTCTGGCCTCAGCTTTGACGGCATCCTGCGGAAGGGTCTTGAGG
AAGGTGGCGCAATGAAAGAAAATCGCCCACGCGCTTTCGATAGTGCGTAC
CGTATGGCCCTTTAATTTTTTGGTTGGGAATGACTAGACTAGACTCTAGT
ATCAATGGAATCACGAAGGGGCGGCGAGCTCGGTAACATAGAGGGAGAGG
AGGGGTCGCGGGGAGGCTTTCCTTTGAACTGAATGGACTGGAATGGGCTC
TGAAGGAACAACAGGGTTGTTCGCGAACGGAGCGTTCGCCTTTTGTGAGG
ACCGCTTACATCGAGGGAGAGGGAGAGGACCGACAGAACAACAAAAGAAA
GAAAGAGGAGAGTTTCAATACGATGTGGCGCCGCGCGTGCATTAGCACAC
CATCTATCTATCTTATCCATCTGTCTTGCAGTATCTATTTACCTTCCTCT
CTATATCTATTGTTATTAGTCTTCAGGCGGGGGGGGGATTGCGCGCGCTG
AGAGAAATAGGAACCGGCGCTCGCTGTGCGTGTGGGGTCACCGGTAGATA
GATGACATATGCATATT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1096:177467..184533+

>mRNA_A-nodosum_M_contig1096.26.1 ID=mRNA_A-nodosum_M_contig1096.26.1|Name=mRNA_A-nodosum_M_contig1096.26.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3525bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:177467..184533+ (Ascophyllum nodosum dioecious)
ATGGCGACGATCGTAACGGCGGAAGTGGCGTCGAAACCGGAAACGGATGT
GAGCGCACAAGCAGCAGTTCTACGAGTATCGCGGTCACCGTTGATGGTTG
GATCTTCCTCGCCGAAGAGATCGTCGCCGGCGGCGGTGGGTGAGATTTTG
GACAGCGGCGACGCGGCAACAAGTTTGGAACCTCACACGCCCGCCGGGGA
CGGGACTGACCCTGCTGCGTCTGTTTCGGAGCGCCCGACGGAGCGGCGAA
AGCAACAGTCTCAGGACCTGGGGGAAATAGAGGTCACTGTAACGGATGAG
AACGATGGCGGCGAGGATGACGGATCACCGCGCCCCCGTGACGCGGAAAC
CACATCCTTATCTTCTACCCCTAGGCTTTCGATGTCGGTGCCGCCGCCCG
CAAAGAGAGTCGTGGAGCCGAAGACTCGACGGTCTCACCACAGGAAGATC
CACCCTCCACCGGAGGAGGAGGAGCTCGTGGACGGGCGGAAGTTCAAGCG
AAGGCGAGAAAGCGCCCCGGCAGCGATGGCGACGCCGGATACCCGCGCGT
TCGCGGGCTCGCGCGTGGGTGACGCTAACAACGACGGTGATGGTGACGAT
GACAGCAACGATCGCGCAGCTGGAGGAGAACGAGGCTCGGCGCGGCAGGC
GCGCGTGACGATATCCTCCTCCGGGCCCGCCAGGGCGAAGGAAGGAGTGG
TCAGGGGCAGAGGCAGAACAAGGAGCAGGGGTACCCGGCCGCTGGGGTGC
GGCCTCCCACAAGCGACCGTGGAGAACGAATACAGCAGACCCAGGTTGCA
TCACCGCGCTCCGCTGGTTCCCGCTTCGCCGGGTGGTCGGAGTCGAGGCG
TCTCGGGGAGCGGGGATCCTCCCGTGCGGCGTTCGAAGCGTAAGGTCGAG
TCAACTCATGCCACCCGCACTCCCGAGAGAAACCTCCCGGACGAGCAGAG
GGAGAGTTTGGACAGAGGTGCTCGATCGCAGGATGATAGTGCTGCCTCGG
GAGTGATAATGAGTGATGGCGACGGCGGCGGTAAGAGTTGTGAGGGCAGC
GACGGAAAGGGCGATGATAACAGTGACGCGAAATGGAGTGATGGCGGCGG
TGTCGATGGCAGTGGCAGCAACGGTGGCGGTGCCGGCGGAGACGATCAAC
GTATAGCAATCAGCGGACCCGGCCGCGAGAGAGGTGATCGCGAAGTCACA
AGTGGTGATGGCATCATCGACGCGGGTCAACGCACAGAAACAGGCGCAAG
TACAGGGGCAAGCACGTTAGGGGCGGACAATGTACCAACCACATCCGCTA
CGACGCCCGCGGCCATTGAAGGCGGCGGTGGCGAGAAGCAGAGTGCTGTC
GTGGATCACCCTGAGCCAGATCTCGCCAACGAGGAAAAACGGGCCCTCGA
TGGTACGCAGCAGCGGCGTAGGAGGTCGACATTTCCGGACGGGAAGAAGC
CGGGACCGCAACGTGCTGTGGGATACCCGATATCAGCTGTGTCTGCGGTG
CTGCGTCAGCTTCACATGCGTGTGCTAAGTGATGAGGAGATGACGATGCT
AGACAAGGTCACAGGGGAGGGCGTGGCAGAGCATCTGGTGGAGATGCGAA
CAATCTTGGACGAGCAGAAGCAAAGGCTGGAGATGAAGATCCGCAGCTTG
CAGGACGATTCTCGCGATGACATCGACGCCGACAGCGCAAGCGGTGACCA
AAGCCAAGGGGAGGAGCAGCAGCAGCAGCCACAGAACAACGGCGTCGTTG
ACAACTCGCGACAGCCCACGCCGGGACACCCGGAATCGGCGTTGTTGGAA
GACCGTGGCGGTTGTGACGCCACAGACCGCGCGGAGGAAGGAGTGTCTGT
GAATCCAGTTGCTGCCTCTGCTGCCGGTTCTGCTGCCGCTGTGACTGCTT
CTGCGCCTCATGCCGCTGCTCCGACTACTGGAGCTAATGCTGCCGCTGTC
ACTGCCCTGGCGACGCCCGGCCAGTTTGACCAGAGTGCAGAGGGTGTCGC
GATGGATTGTAATCCACACGTGTCCGCAGTTCAGGGGAACGTTGCAGCCG
CGGCTGCGGCGTCAGCAAGCCTACGGTACCTTGGACCGCCGCCGGCGGTC
GCCGGGCCCACCGTCGTTTCCTCAGCCGAGCAATCGCCTTCGCTGGCGCC
GCTTGGTGGCGCCTCCGCCCCTGCTCAAGGAGGCGCGCCGTTTCATATGG
GCACGCCTTTCCACCACGCAATTCAGGCGGTTACACCTCTTTTGCCTGCA
GAAGGCGACCACCAAATGCGACTGGTCCAACACCAGGGGGCTACGAACGG
AGTATGGTTAGGTCAGACGACGGCGCACGGGGCCCTGTTGTCGCCGAACA
ACACCGTCTGCGCTAACAACCAAAAGTTTCTTTTCCAAGGACACGAGTGG
GCGGCCGCGGCTGCTGCAGCTGCTGCTGCTCCTACCCCTCTTCCCCCAAC
CCCACATGGAGGTACCGTGCCCCCGCCACCGGCAGAGTTTGCACCACCTG
CGGGTTTTATGCCTCCAGTTTCGTCGCTACCGCTGTCATCATTTCCGTCA
TCGATCCCGCTAGCGCCGCTGGGCTGGCCGCAGGCGATGCTATCCGGTGG
TGCGCCGCCCGCAGAGATGATGGGCGTGGCGGGAGCTAAGGAGAGTGGAT
ACGCATTAGGGGGTGGACGGGAAGGACACTCTCGGGTGTTGGATATTGCG
AAGCGCGGTGAAGCGGGCAAGTTGACGGAGGCTGAAGCAGCAGCGATGGC
GGCGGGCTGGCGGTATTACCACGACAGTGTGAAAACGCAACAGTCTGTTC
AACTAGTATCGGTAGGAGGGAGAAGTGGCCACCACGATCACATCGAGGGC
GGACGAAACGGGACGCGCGAGGACGCTGCGGTGGGTGGTGACGGTGGGGC
TTGTGCGGCAGAAGACGAAGATTCGGAGGAAGAGGGCTCAGGAGGAGCGG
CTCGATGCTCGCCAATGTTGGGGCGATCTGTCGGACTGGGTGGTGCAAGA
GCCGCACGCAGTGGCAAGTCAGGAAGGGGTCTCGAAAATCTCAAGCTCAA
GGCAAGATCCCGGGGCGACTCTCTCGGTGGGGAAATCAACGGCATCAACG
GTCCCGCGAGAGGTGTGAGCGGGGGCGTCGAGAAGTCTCTTGAGCGGGCG
ACGCCGACGGTTCCTTCTCTTGTCGACAGACAAACCTCCTCAAGCGGGCC
CCCCGTAGGCTTCGCCGCGCCAGCGGCAGCTACCCAGGGAGTTCGACGTG
TAGAGCAGCAGTTGGGCGACACCCGAGGCTCCCAACCCGGGGGCTCCGAC
AGTTACGCCCCTGGTGTTCGTCGGGGAGATGCTGGGGACGCACCTGTGGC
ACGGATGGGTAACCCAGCAGTGGTTACTTCGGTGGCCATCAACGGCGGTA
GGGGCAGCGACCAGGGTGACGCAGCAGCCAGCAGGGGGCTGGAGGAGCAA
GCTCCAACCCTGGCGCCGGTTGTCGACGACCAGAGGCGAAAGATGGCGGC
TCAGGCCATGCTGTCGTTCCGATAA
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