mRNA_A-nodosum_M_contig1096.13.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: D7FP49_ECTSI (Fimbrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP49_ECTSI) HSP 1 Score: 230 bits (586), Expect = 4.230e-66 Identity = 136/293 (46.42%), Postives = 167/293 (57.00%), Query Frame = 1
Query: 853 SRPVILGVGWQLVRIAILRTANVIESPALTELLTAEEAEQKRGHPGQEELVMSRWFNEYLKTVGSDREVWSFGAELADGVAWCCLLNAIDPAACPPPDEFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGLPSRLQHDPDKRDCYREDANKRGTDXXXXXXXXXXXXXXXXXXXXXPPETQRDV------------PCSSAPPPAPFVDPSPPRSSWGFGGS----GRIFRETEKAEEEEEHEMVLLENDEEVESKQACGLGTFFGYFGCLSRN 1683
+RPVILGVGWQLVR+AIL+TAN+ + P L+EL T EEA + G GQEELV+SRWFN++L VGS+R+VWSFGAELADGVAWC LLNAIDPAACPPPDE D E NA AI AV +M VKGVF+T E LL SD+K N+M CAQ+M+ FP +P+ L+ P + ++KRG+ T P PSPPRS W FG + GR++ +D+E ES CGLG F F C+SRN
Sbjct: 136 NRPVILGVGWQLVRLAILQTANIDDRPELSELFTPEEAAKNIGQAGQEELVLSRWFNQFLGAVGSERQVWSFGAELADGVAWCTLLNAIDPAACPPPDEHDAETNAASAIEAVHKMEVKGVFMTKEALLESDKKQNVMFCAQLMNVFPTIPTYLRPPPTFKS-GASGSSKRGSGRAPFSSTYDSRGGSGASTADSSMYTSSPAAXXXXXXXXXGAPRYVGSSXXXXXAPSPPRSRWSFGFADNTGGRLYN---------------YNSDDEGESGPGCGLG--FSIFSCISRN 410
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0DPM9_PARTE (Uncharacterized protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DPM9_PARTE) HSP 1 Score: 83.2 bits (204), Expect = 3.730e-13 Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 862 VILGVGWQLVRIAILRTANVIESPALTELLTAEE--AEQKRGHPGQEELVMSRWFNEYLKTVGSDREVWSFGAELADGVAWCCLLNAIDPAACPPPD-EFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGL-PSRLQHDPDKRDCYRED 1353
+ILG+ WQ+++I + N+ E+P L L EE + + P Q ++ RWFN +LK + R+V +F +L DG + LLN +D C DPE A+ I + +GV F+ ++ + KLN++ CAQI +A PGL PS Q D +K +ED
Sbjct: 128 IILGLVWQIIKIQTTKMVNLKENPFLIRLKKEEEEIGDILKLPPDQ---LLLRWFNHHLKEAKAQRQVNNFDKDLQDGENYIVLLNQLDKDRCSLDGLGQDPENRAKTIIQNAESIGVPK-FMRPVHIVKGNSKLNLLFCAQIFNACPGLTPS--QEDYEKTKMLQED 289
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0A8J5X695_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X695_DIALT) HSP 1 Score: 79.3 bits (194), Expect = 1.080e-11 Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 1
Query: 862 VILGVGWQLVRIAILRTANVIESPALTELLTAEEAEQKRGHPGQEELVMSRWFNEYLKTVGSDREVWSFGAELADGVAWCCLLNAIDP----AACPPPDEFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGL 1302
++LG+ WQLV++A+L + N+ P L LL E + E +++ RW N +L G V +FG ++AD VA+ LL+ I P A+ P DE D A + R+G ++ D+ A + KLN+ A + +A PGL
Sbjct: 426 LVLGLMWQLVKMALLASVNLSAHPGLAVLLRDGEQLSEFSELCAEHVLL-RWLNWHLDEAGRAERVRNFGKDIADSVAYTVLLHRICPESVGASLAPLDEPDAYARAEAVVETAARLGDVSFAISARDITAGNEKLNLAFVAALFNAAPGL 575
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0A3M7QSH3_BRAPC (Plastin-2 isoform X2 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7QSH3_BRAPC) HSP 1 Score: 71.2 bits (173), Expect = 2.920e-9 Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 1
Query: 862 VILGVGWQLVRIAILRTANVIESPALTELLTAEEAEQKRGHPGQEELVMSRWFNEYLKTVG-SDREVWSFGAELADGVAWCCLLNAIDPA------ACPPPDEFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGL 1302
+ILG+ WQ+++I + N+ P L LL E ++ +EEL++ RWFN +L G S REV +F +++ D VA+ LL I P P +E D A ++ +++ + F+T D++ ++KLNM A + + +P L
Sbjct: 277 LILGLLWQIIQIGLFSEINLTHHPGLVMLLKDGETKEDLLKLTKEELLL-RWFNYHLARSGYSGREVKNFSSDIKDSVAYSHLLKQICPTNHQPTVTLAPLNENDLNRRAEAMLSEAEKLRARD-FVTANDVVTGNQKLNMAFVANLFNTYPAL 428
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0A183J1Q4_9BILA (Uncharacterized protein n=2 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183J1Q4_9BILA) HSP 1 Score: 70.9 bits (172), Expect = 3.600e-9 Identity = 42/151 (27.81%), Postives = 79/151 (52.32%), Query Frame = 1
Query: 862 VILGVGWQLVRIAILRTANVIESPALTELLTAEEAEQKRGHPGQEELVMSRWFNEYLKTVGSDREVWSFGAELADGVAWCCLLNAIDP----AACPPPDEFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGL 1302
++LG+ WQ++RI + T N++ P L LL +E+ G E++++ RW N +L+ G DR + +F ++ D V + LL I P + P +D A + +++ + F+T +D++ KLN+ A + +++PGL
Sbjct: 179 LVLGLLWQIIRIGLFSTINLVHVPGLFRLLGKDESLADLQKLGPEQILI-RWVNYHLENSGVDRRLTNFTGDVQDSVIYTHLLKQIAPPERRVSLEPLGVYDSLLRAEAMLKEAEKLDCRS-FVTPQDVVNGVYKLNLAFVANLFNSWPGL 327
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0A6B2FWQ4_MYXSQ (Plastin-3 (Trinotate prediction) (Fragment) n=1 Tax=Myxobolus squamalis TaxID=59785 RepID=A0A6B2FWQ4_MYXSQ) HSP 1 Score: 69.3 bits (168), Expect = 8.280e-9 Identity = 49/153 (32.03%), Postives = 80/153 (52.29%), Query Frame = 1
Query: 862 VILGVGWQLVRIAILRTANVIESPALTELLTAEEAEQKRGHPGQEELVMSRWFNEYLKTVGSDR-EVWSFGAELADGVAWCCLLNAIDPAACPPPD-----EFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGL 1302
+ILG+ WQ++RIA+L+ N+ +P L LL E ++ E+L++ RW N LK VG D E+ +FG+ L D A+ L AI P + E D A+ I+ + GV + ++ D+ ++KLNM+ A + + +P L
Sbjct: 214 LILGIMWQVIRIAMLKNININITPDLLCLLLPGETPEELFALSPEQLLL-RWVNYQLKNVGYDGGEITNFGSALKDSTAYSALEKAIMPESLIHSSDKVYKESDHNKRAQMIIDNAKNSGVSAL-VSKNDITNCNQKLNMVFLADMFNKYPNL 364
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0A8J6E7U0_9EUKA (Calponin n=2 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6E7U0_9EUKA) HSP 1 Score: 67.4 bits (163), Expect = 3.740e-8 Identity = 45/149 (30.20%), Postives = 69/149 (46.31%), Query Frame = 1
Query: 862 VILGVGWQLVRIAILRTANVIESPALTELLT-AEEAEQKRGHPGQEELVMSRWFNEYLKTVGSDREVWSFGAELADGVAWCCLLNAIDPAACP-PPDEFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGL 1302
++LG+ WQ++++A+ N+ P L LL EE P + L+ RWFN +L G +R V F + DG + LL I P C P PE A I ++GV+ F+ D+ KLN+ A + + +P L
Sbjct: 131 LVLGLVWQVMKLALFSEINLTHHPELYRLLEDGEELSDFMKLPAEHILI--RWFNFHLAAAGWERRVKDFSGSIKDGENYTVLLAQIAPEQCNRSPLSMSPEDRAEAVIAGAAKLGVER-FIQPSDITNGISKLNLAFVAALFNNWPAL 276
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0A6G0UFN1_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UFN1_9BILA) HSP 1 Score: 65.9 bits (159), Expect = 1.340e-7 Identity = 41/152 (26.97%), Postives = 76/152 (50.00%), Query Frame = 1
Query: 862 VILGVGWQLVRIAILRTANVIESPALTELLTAEEAEQKRGHPGQEELVMSRWFNEYLKTVGSDREVWSFGAELADGVAWCCLLNAIDPA-ACPPPDEFDPEGNARKA---INAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGLP 1305
++LG+ WQ++R+ + N+ P + LL E E++++ RW N +L +DR + +F ++ D + LL I P A EGN R+A +N ++ + F+T +D+++ + KLN+ A + + +PGLP
Sbjct: 216 LVLGMIWQIIRVGLFSHINLEHVPGMFRLLKEGETLDGLRRLTPEQILL-RWANHHLANASTDRRMANFTTDIVDSTIYTHLLYQIAPKEANVTLIPLQQEGNTRRATYMLNEASKVDCRS-FVTPDDVVSGNYKLNLAFVANLFNKYPGLP 365
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0A6G3MED2_HENSL (Plastin-2 (Trinotate prediction) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MED2_HENSL) HSP 1 Score: 64.7 bits (156), Expect = 2.700e-7 Identity = 45/168 (26.79%), Postives = 84/168 (50.00%), Query Frame = 1
Query: 817 STARLDPAHTVPSR-PVILGVGWQLVRIAILRTANVIESPALTELLTAEEAEQKRGHPGQEELVMSRWFNEYLKTVGSDREVWSFGAELADGVAWCCLLNAIDPA-----ACPPPDEFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGL 1302
+T +DP R +ILG+ WQ++RIA+ ++ N+ + L +L E ++ E+L+M RW N ++ G + V +FG +L D + CL + I P + D + A+ I + GV ++ D+++ ++KLNM+ A++ + +P L
Sbjct: 115 NTVNVDPEGIKQGRIHLILGLLWQIIRIALFQSINIKVTSDLLCMLREGETAEELLSLSPEQLLM-RWVNYQVEKAGCTKPVNNFGNDLKDSYVYSCLESVIMPEHLIHHPSQMNSQSDIKSRAQMVIANAENAGV-AALVSPSDIVSGNQKLNMLFLAEMFNKYPCL 280
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Match: A0A8B7YGZ5_ACAPL (plastin-3-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YGZ5_ACAPL) HSP 1 Score: 63.9 bits (154), Expect = 5.410e-7 Identity = 41/150 (27.33%), Postives = 73/150 (48.67%), Query Frame = 1
Query: 862 VILGVGWQLVRIAILRTANVIESPALTELLTAEEAEQKRGHPGQEELVMSRWFNEYLKTVGSDREVWSFGAELADGVAWCCLLNAIDPAACP---PPDEFDPEGNARKAINAVQRMGVKGVFLTDEDLLASDRKLNMMLCAQIMDAFPGL 1302
++LG+ WQ++R+ + ++ E P L LL E EEL++ RW N +++ GS R + +FG ++ D + LL I P P P A ++ + M + F+T +D++ ++KLNM A + + +P L
Sbjct: 226 LVLGLLWQIIRVGLFAKIDLHEVPGLMRLLREGEDINTLLSLSPEELLI-RWVNYHMEQAGSPRRINNFGEDIKDSEVYDKLLRQIAPKEIQLGHVPQSAPPLDRAEAVLDNAELMKCRQ-FVTPQDVVNGNQKLNMAFVANLFNTYPAL 373 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1096.13.1 >prot_A-nodosum_M_contig1096.13.1 ID=prot_A-nodosum_M_contig1096.13.1|Name=mRNA_A-nodosum_M_contig1096.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=296bp MFLCTTSTARLDPAHTVPSRPVILGVGWQLVRIAILRTANVIESPALTELback to top mRNA from alignment at A-nodosum_M_contig1096:113538..117483+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1096.13.1 ID=mRNA_A-nodosum_M_contig1096.13.1|Name=mRNA_A-nodosum_M_contig1096.13.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3946bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:113538..117483+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1096:113538..117483+ >mRNA_A-nodosum_M_contig1096.13.1 ID=mRNA_A-nodosum_M_contig1096.13.1|Name=mRNA_A-nodosum_M_contig1096.13.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:113538..117483+ (Ascophyllum nodosum dioecious)back to top |