mRNA_A-nodosum_M_contig1094.15.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE) HSP 1 Score: 149 bits (376), Expect = 7.130e-41 Identity = 80/125 (64.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYN 384
E ARL NFT VK H L+ SD+ IL +V PFV T VV L E YN+ A+ DAG DLWAFWHDNRLKL WYNVAKD+ALIQPSSAFMERVF +LRA +D+RQ+ DRI A+ALLKYN
Sbjct: 277 EGARLLNFTFVKGHQLEESDVHILPEVLPFV-TPTVVAALVEEMDAYNVAAAE--TDAGCDLWAFWHDNRLKLSAWYNVAKDVALIQPSSAFMERVFSVLRACVDDRQEHCLLDRIEAAALLKYN 398
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE) HSP 1 Score: 150 bits (380), Expect = 1.160e-40 Identity = 77/126 (61.11%), Postives = 94/126 (74.60%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYNR 387
+AAR+ NF V H ++ SD+ +L +VFPFV T +VH L +EK Y+ A+ D+G DLWAFWHDNR +LP WYNVAKD+ALIQPSSAFMERVF +LRA +DERQ+ SDRI AS LLKYNR
Sbjct: 386 KAARILNFRVVTGHGVEESDVHVLAEVFPFVTTA-MVHELVVEKDLYSTAAAG--TDSGCDLWAFWHDNRPELPAWYNVAKDVALIQPSSAFMERVFSLLRACMDERQEQCLSDRITASTLLKYNR 508
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5KPF8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF8_9PHAE) HSP 1 Score: 147 bits (371), Expect = 2.340e-40 Identity = 80/125 (64.00%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYN 384
E ARL NFT VK H L+ SD+ IL +V PFV T VV L E YN+ A+ DAG DLWAFWHDNRLKL WY VAKDIALIQPSSAFMERVF +LRA +D+RQ+ DRI A+ALLKYN
Sbjct: 28 EGARLLNFTFVKGHQLEESDVHILAEVLPFV-TPTVVAALVEEMDAYNVAAAE--TDAGCDLWAFWHDNRLKLSAWYKVAKDIALIQPSSAFMERVFSVLRACVDDRQEHCLLDRIEAAALLKYN 149
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE) HSP 1 Score: 146 bits (369), Expect = 2.730e-38 Identity = 80/130 (61.54%), Postives = 95/130 (73.08%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLK--LPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYNRGR 393
EAARL +F VK H L ++DI++L FPFV +DV L+ + DYNI AS D G+DLW+FWHDNR K L WY VAKDI L+QPSSAFMERVF ILRA +D RQ+ S+SDR+ ASALLKYNRGR
Sbjct: 630 EAARLLDFRYVKQHQLHVADIDLLCR-FPFVTENDVAR-LKDQMDDYNIAASG--VDTGYDLWSFWHDNRHKSSLCHWYGVAKDIVLLQPSSAFMERVFSILRACMDARQEKSFSDRVAASALLKYNRGR 755
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5K4E0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4E0_9PHAE) HSP 1 Score: 117 bits (292), Expect = 1.660e-30 Identity = 62/129 (48.06%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 7 VEAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYNRGR 393
+EAARL +FT ++ H +++ L VFPF++ ++ V L EK DY + A D +D W FW D++ KLP W+ V DIAL+QPSSAFMERVF + + LD Q + SDRI A+AL+KYNRGR
Sbjct: 1 MEAARLIDFTFMRRHKYSANEVRSLA-VFPFIS-EEQVDKLLTEKDDYYVAARV--TDRDYDFWQFWQDHKEKLPTWFAVVLDIALVQPSSAFMERVFSTVHSCLDSSQNSCLSDRIMAAALIKYNRGR 125
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5JEX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX4_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.040e-29 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYNRGR 393
+AA+L +FT +K I L+ V PFV +V L EK D+ + AS+ A+ GH AFW+DN+ KLP W+ + D+AL+QPSSAFMERVF ILR +ERQ+ YSDRI AS LLKYNRGR
Sbjct: 32 KAAKLTDFTFMKGRKYSDDTIRTLK-VLPFVKKK-MVRGLLKEKEDFYMAASDTEAEYGH--MAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRGR 155
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE) HSP 1 Score: 118 bits (296), Expect = 4.040e-29 Identity = 64/128 (50.00%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYNRGR 393
+AA+L +FT +K H +I L VFPFV+ DD++ L EK D+ + A++ D +D FW DN+ LP W+ + D+ L+QPSSAFMERVF ILR ERQ++ YSDRI ASALLKY+RGR
Sbjct: 268 KAAKLTDFTYMKTHKYSNDEIRSLS-VFPFVD-DDMMDGLLKEKNDFYVAATD--TDTDYDNMTFWSDNKKNLPTWHELVLDVVLLQPSSAFMERVFSILRCCFSERQESVYSDRICASALLKYSRGR 391
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5KCX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX4_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.540e-27 Identity = 64/128 (50.00%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYNRGR 393
+AA+L +F +K I L+ V PFV + +V L EK DY + AS+ + + GH AFW DN +LP W+ + D+AL+QPSSAFMERVF IL +ERQ+ YSDRI ASALLKYNRGR
Sbjct: 32 KAAKLTDFVFMKSKKYSDDTIRSLK-VLPFVKSK-MVKGLLKEKEDYYMAASDTDIEYGH--MAFWKDNEKRLPTWHALVLDVALLQPSSAFMERVFSILPCCFNERQEHVYSDRICASALLKYNRGR 155
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 114 bits (285), Expect = 6.830e-27 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYNRGR 393
+AA+L +FT +K I L+ V PFV +V L EK D+ + AS+ A+ GH AFW+DN+ KLP W+ + D+AL+QPSSAFMERVF ILR +ERQ+ YSDRI AS LLKYNRGR
Sbjct: 560 KAAKLTDFTFMKGRKYSDDTIRTLK-VLPFVKKK-MVRGLLKEKEDFYMAASDTEAEYGH--MAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRGR 683
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Match: A0A6H5KTX0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX0_9PHAE) HSP 1 Score: 114 bits (285), Expect = 7.020e-27 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 10 EAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYNIVASNNNADAGHDLWAFWHDNRLKLPFWYNVAKDIALIQPSSAFMERVFCILRASLDERQKTSYSDRIGASALLKYNRGR 393
+AA+L +FT +K I L+ V PFV +V L EK D+ + AS+ A+ GH AFW+DN+ KLP W+ + D+AL+QPSSAFMERVF ILR +ERQ+ YSDRI AS LLKYNRGR
Sbjct: 643 KAAKLTDFTFMKGRKYSDDTIRTLK-VLPFVKKK-MVRGLLKEKEDFYMAASDTEAEYGH--MAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRGR 766 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1094.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1094.15.1 >prot_A-nodosum_M_contig1094.15.1 ID=prot_A-nodosum_M_contig1094.15.1|Name=mRNA_A-nodosum_M_contig1094.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=133bp MYVEAARLFNFTCVKLHPLDISDIEILEDVFPFVNTDDVVHNLELEKTDYback to top mRNA from alignment at A-nodosum_M_contig1094:102964..103362- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1094.15.1 ID=mRNA_A-nodosum_M_contig1094.15.1|Name=mRNA_A-nodosum_M_contig1094.15.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=399bp|location=Sequence derived from alignment at A-nodosum_M_contig1094:102964..103362- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1094:102964..103362- >mRNA_A-nodosum_M_contig1094.15.1 ID=mRNA_A-nodosum_M_contig1094.15.1|Name=mRNA_A-nodosum_M_contig1094.15.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=399bp|location=Sequence derived from alignment at A-nodosum_M_contig1094:102964..103362- (Ascophyllum nodosum dioecious)back to top |