mRNA_A-nodosum_M_contig109.5.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: D8LCP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP9_ECTSI) HSP 1 Score: 665 bits (1715), Expect = 5.910e-232 Identity = 344/635 (54.17%), Postives = 433/635 (68.19%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEIFRPFLYRWRNDNQWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLGWPLQVSLSGGNIDTENRLARWGLDDIWRICWMTLIFGALLPLSRSAWALKKNYSLAMWLHIALGAGVFFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGRRGNSMSHPFTTCSSHDVLMPFADNSGANCAETSNVLPTIEPPIKTDMSWPGHRFSLKRASSRRLSGDQTDQDDPSTAQGDLL--------IGVDTESKKDDDEISVVVSTTETG------IDNIALSVSGMKHIPPGTRSITIARIHLTNITSPSVSSVKRGDGSNAAAP---VEEAVESKQKKLDRKNMVIKRLPTLEFQEFRKNGVDAGNLEELTGGGEWDKMAIIKIHRRSAPKVREYSCMGYTHMMSSYRRTETAHMADLETAEDGGV-PLSTYGPYRSEYGRLTEFPNLPPLLIIATGAGAALALDLIGYVRANKLEPARPVTICYSSASLALLQFVTNTLLAARTPGIHIKTALTRHDDLELFDTSTERKDDLAIGRLDVMGIMEAASADTEVYFCGGGAVNRLLQTVCSKRGMKYAGSSVQ 1851
D GCLK GPWS K FD IARASAR IISTT+LMF+TMCHGTWN+LSEV++ RPFLY WR DN WLH++GGWTMG W ++HV+ L LP L +G+KNV VGG + P QVSL+ N+D +N+LA WG DDIWRI WMTLIF L+PLSRSAWALKKN++LAMWLH+ +G G FFD+WRR+THPHVW LNTPV LWY+ADK+WCSTRG G M+HPFTTCSSHD N A ++T+ V IE P T + W GHRF L R ++ D ++ PS G L +D +S DDDE TT G ID +++ V G+K P +RS+++ V + G+G N A P V E + +RK VIKRL T F+E+RK + G L + G W KMAI+K++RR++ K ++ SCMG T ++ +R ET+ +ADLE A+ L TYGPYRSEYGRL EFP+LPPLLI+ATGAGAAL LD IGYVRAN + P RPV++ YSSASLALLQFVTNTLLA R+PGIHI+TALTRH+DL++ D ++ + +L +GRLD+ I+ S +TEVYFCGGG +N LL+ C++RG+KY GSSVQ
Sbjct: 3 DDPGCLKAGPWSAKAFDAIARASARFIISTTNLMFITMCHGTWNFLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSLFHGFKNVAVGGPVELPFQVSLAVSNVDVDNKLANWGYDDIWRIFWMTLIFCVLIPLSRSAWALKKNFTLAMWLHMGVGIGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCSTRGSDGTEMAHPFTTCSSHDT-----PNKPATLSDTTAVNTMIEVPTDTSVHWKGHRFLLASGGQRSVTTDPKHRNVPSFFSGRSLGTHGSSGSKDIDVDSIFDDDEKEEPEETTMIGVDVRPDIDEVSVIVGGLK--PTASRSLSLPLPGTIYGPETEVGTTNDGNGFNPARPDKLVREKTGADVGGANRK-AVIKRLNTTAFKEYRKADAEKGQLATIQAGS-WSKMAIVKVNRRTS-KAKKCSCMGLTFILRIFRDPETSSIADLEAAQRNPTFELRTYGPYRSEYGRLVEFPHLPPLLIVATGAGAALVLDFIGYVRANNIVPLRPVSVYYSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDLQIVDEASGPEPELVMGRLDIKNIIGEVSQETEVYFCGGGGINALLRETCARRGIKYVGSSVQ 627
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: D7G5T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T0_ECTSI) HSP 1 Score: 649 bits (1674), Expect = 1.690e-222 Identity = 351/702 (50.00%), Postives = 440/702 (62.68%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEIFRPFLYRWRNDNQWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLGWPLQVSLSGGNIDTENRLARWGLDDIWRICWMTLIFGALLPLSRSAWALKKNYSLAMWLHIALGAGVFFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGR----------------------------------------RGNSMSHPFTTCSSHDVLMPFADNSGANCAETSNVLPTIEPPIKTDMSWPGHRFSLKRASSRRLSGDQTDQDDPST----------AQGDL--------------------------LIGVDTESKKDDDEISVVVSTTETG------IDNIALSVSGMKHIPPGTRSITIARIHLTNITSPSVSSVKRGDGSNAAAPVEEAVESKQKKLDRKNM--VIKRLPTLEFQEFRKNGVDAGNLEELTGGGEWDKMAIIKIHRRSAPKVREYSCMGYTHMMSSYRRTETAHMADLETAE-DGGVPLSTYGPYRSEYGRLTEFPNLPPLLIIATGAGAALALDLIGYVRANKLEPARPVTICYSSASLALLQFVTNTLLAARTPGIHIKTALTRHDDLELFDTSTERKDDLAIGRLDVMGIMEAASADTEVYFCGGGAVNRLLQTVCSKRGMKYAGSSVQ 1851
D GCLK+GPWS K FD IAR SAR IISTT+LMF+TMCHGTWNYLSEV++ RPFLY WR DN WLH++GGWTMG W ++HV+ L LP + +G+KNV VGG + PLQVSL+ N+D +N+LA WG DDIWRI WMTLIF L PLSRSAWALKKN++LAMWLHI +G G FFD+WRR+THPHVW LNTPV LWY+ADK+WC TRGR G M+HPFTTCSSHD N A + T+ V TIE P T + W GHRF L +S RR + TD + S AQG VD +S ++DE TT G ID +++ V G+K P G+RS ++ R+ + P VS+ G G +A P + + + N VI+RL T F E+RK + G LE + G W KMAI+K++RR++ K + SCMG T ++S +R ET+ +ADLE A+ + + L TYGPYRSEYGRL EFP+LPPLLI+ATGAGAAL LD IGYVRAN + P RPV++CYSSASLALLQFVTNTLLA R+PGIHI+TALTRH+DLE+ D++ + +L +GRLD+ I+ S +TEVYFCGGG +N LL+ C++RG+KY GSSVQ
Sbjct: 161 DDPGCLKDGPWSAKTFDVIARISARFIISTTNLMFITMCHGTWNYLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSIFHGFKNVAVGGPVELPLQVSLAVSNVDLDNKLANWGYDDIWRIIWMTLIFCVLTPLSRSAWALKKNFTLAMWLHIGVGVGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCCTRGRVDDRAETTRISLDEDYMLLLWHEEHPKRICDIFWLKHRDSDGTEMAHPFTTCSSHDT-----PNKQATASGTAAVKTTIEVPTDTSVHWKGHRFLLASSSGRRSNA--TDPNRRSVRSFFSGKSFGAQGSFGRVSSFRFGQSNPMREARLASSHTGSSQDVDVDSFFEEDEKDEPGETTMIGVDANPDIDEVSIMVGGLK--PKGSRSYSLPRLGTISGGVPEVSTTNDGSGVKSARPDKPVKKETGSDVGGPNRREVIRRLSTKNFIEYRKAEAEEGRLETVEAGS-WSKMAIVKVNRRTS-KASKCSCMGLTFILSIFRDPETSSIADLEAAQRNAPLQLRTYGPYRSEYGRLAEFPHLPPLLIVATGAGAALVLDFIGYVRANNIVPLRPVSVCYSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDLEIVDSANGPEPELVMGRLDIKKIIGEVSQETEVYFCGGGGINALLRETCTRRGIKYVGSSVQ 851
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: D7G5S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S9_ECTSI) HSP 1 Score: 258 bits (658), Expect = 5.470e-79 Identity = 126/205 (61.46%), Postives = 159/205 (77.56%), Query Frame = 1
Query: 1243 MAIIKIHRRSAPKVR-EYSCMGYTHMMSSYRRTETAHMADLETAED-GGVPLSTYGPYRSEYGRLTEFPNLPPLLIIATGAGAALALDLIGYVRANKLEPARPVTICYSSASLALLQFVTNTLLAARTPGIHIKTALTRHDDLELFDTSTERKDDLAIGRLDVMGIMEAASADTEVYFCGGGAVNRLLQTVCSKRGMKYAGSSVQ 1851
MAI++++RR++ +C+G T +++ +R ETA +AD+E D +PL YGPYRSEYGRL EFPNLPPLLIIATGAGA L LD +G+VRA K+ P RPV +CYSSASLALLQFVTNTLLA RTPGI ++TALTRH++LE+F+T+ + K +L IGRLDV I+ S DTEVYFCGGG +N LL+ C+KRGMKY GS+VQ
Sbjct: 1 MAIVRLNRRTSQSSPCACTCIGLTWVLNIFRTPETASIADVEETNDLETIPLRVYGPYRSEYGRLEEFPNLPPLLIIATGAGAGLVLDFVGFVRAKKITPKRPVKVCYSSASLALLQFVTNTLLAERTPGIQVETALTRHEELEMFNTTNQPKPELVIGRLDVKSIIRGVSEDTEVYFCGGGGINTLLREACAKRGMKYVGSAVQ 205
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: D7G5S8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S8_ECTSI) HSP 1 Score: 204 bits (518), Expect = 7.070e-56 Identity = 102/249 (40.96%), Postives = 131/249 (52.61%), Query Frame = 1
Query: 220 MGFWIVVHVWLLFLPWLANGYKNVKV-----GGDLGWPLQ-VSLSGGNIDTENRLARWGLDDIWRICWMTLIFGALLPLSRSAWALKKNYSLAMWLHIALGAGVFFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGR----------------------------------------------RGNSMSHPFTTCSSHDVLMPFADNSGANCAETSNVLPTIEPPIKTDMSWPGHRFSLKRASSRR 810
+G W+ + +++ + N + + GGD + V L N+D +N+LA WG DD+WR+ WMTLIF L PLSRS WALKKN+SLAMWLHI +G G FFD+WRR+THPHVW LNTPVVLWY+ADK+WC T GR R ++HPFTTCSSHD + S P IE P++TD++W GHRF L S+R
Sbjct: 7 LGVWLFISTFMVLDRFYWNVWPRQSICTDGCGGDFFCDMDDVGLMASNVDVQNKLANWGYDDVWRLIWMTLIFCVLTPLSRSVWALKKNFSLAMWLHIGVGMGYFFDNWRRRTHPHVWILNTPVVLWYIADKIWCCTEGRVNHRAETTRIKLDEDYMLLLWNEDQPKSICDIFWLKHSDRDSKGSRRTGEVAHPFTTCSSHDTAVGHTSPEAGISTVGSPGRPNIEVPLETDVNWKGHRFLLTSGISQR 255
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: A0A6H5JCC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCC2_9PHAE) HSP 1 Score: 140 bits (352), Expect = 1.320e-34 Identity = 90/229 (39.30%), Postives = 118/229 (51.53%), Query Frame = 1
Query: 1300 MGYTHMMSSYRRTETAHMADLETAEDGGV-PLSTYGPYRSEYGRLTEFPNLPPLL-----IIATGAGAALALDLIGYVRANKLEPARPVTICYSSASLALLQFVTNTLLAARTPGIHIKTALTRHDDLELFDTSTERKDDLAIGRLDV---------------------------------------MGIMEAASADTEVYFCGGGAVNRLLQTVCSKRGMKYAGSSVQ 1851
MG T ++S +R T+ + +LE A+ L T+GPYRSEYGRL EFP+LPPLL IA G G + +SSASLALLQFVTNTLLA R+PGIHI+TALTRH+D+++ ++ + +L +G LD+ I+ S +TEVYFCGGG VN L C++RG+KY G SVQ
Sbjct: 1 MGLTFILSIFRDPVTSSIPELEAAQRNPTFQLRTFGPYRSEYGRLVEFPHLPPLLGQQHCAIAAGFG-----------------------VYHSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDVQIVGDTSGPEPELVMGHLDIKHDTTDSNSLFAGYVRRYDKFVNPRWRALPLVFACLVLPQTIIGEVSQETEVYFCGGGGVNAPLCETCARRGIKYVGRSVQ 206
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: A0A7S1AZW1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZW1_NOCSC) HSP 1 Score: 122 bits (307), Expect = 1.350e-25 Identity = 69/198 (34.85%), Postives = 103/198 (52.02%), Query Frame = 1
Query: 16 LKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEIFRPFLYRWRNDN----QWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLGWPL-QVSLSGGNIDTENRLARWGLDDIWRICWMTLIFGALLPLSRSAWALKKNYSLAMWLHIALGAGVFFDSWRRKTHPHVWFLNTPVVLWYLAD 594
LK GPW+V ++D +AR S R + ++ +++ TM H T L E R L + ++ +WLH V G+ GF ++ HV+ + P +GY G L PL + + G ++D E +L DD+WR+ MTL F L P S L+ NY + + LH + F D RR +HPH W LN PV ++AD
Sbjct: 154 LKLGPWTVPLYDVVARISGRFLTTSLNILMWTMMHTTHRVLQESWFARCGLVDFAQESDESRRWLHNVNGYLSGFLVLFHVYSILFPVFLHGYSAYVTPGSLALPLSERRIEGTDVDNEGKLMGLQGDDVWRLIEMTLFFVILFPWSLRL--LRCNYRVGIQLHRWVFILYFIDIARRHSHPHNWVLNVPVFFLWVAD 349
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: A0A7S0TH34_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TH34_9EUKA) HSP 1 Score: 89.4 bits (220), Expect = 3.000e-15 Identity = 57/205 (27.80%), Postives = 98/205 (47.80%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEIFRPFLYRW---RNDNQWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLGWPLQVSLSGGNIDTENRLARWGLDDIWRICWMTLIFGALLPLSRSAWALKKNYSLAMWLHIALGAGVF-FDSWRRKTHPHVWFLNTPVVLWYLADKLW 603
D G G + V F IA S+R+++ ++S +FL C WN+ E E +L +++N + VG W +G +V+HVW++ A ++ V P + L G++D++RI +L F L+P S + +N++ A + H GA ++ D R +HPH WF N P + W++ D+L+
Sbjct: 86 DSPGPTIPGNFGVTCFALIAWISSRMMLVSSSYIFLFQCRIFWNWFVEREWVHRYLKIGDIHQSNNSIHYYVGIWLVGVPVVLHVWVILFA-AALPQNDIYVYSSWMRPYDAVKGKSIAFYADNLLSLGINDVYRIVSTSLTFFVLIPYSIIKFTRDRNWTFAQYCHYT-GALIYTVDLVRMTSHPHCWFFNVPFIFWWICDRLY 288
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: UPI000C03E7C8 (uncharacterized protein LOC111331484 isoform X1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03E7C8) HSP 1 Score: 72.4 bits (176), Expect = 1.690e-9 Identity = 56/192 (29.17%), Postives = 94/192 (48.96%), Query Frame = 1
Query: 67 SARLIISTTSLMFLTMCHGTWNYLSEVEIFRPFLYRWRNDNQWLHTVGG-WTMGFWIVVHVWLLFLPWLANG----------YKNVKVGGDLGWPL---QVSLSGGNIDTENRLARWGLDDIWRICWMTLIFGALLPLSRSAWALKKNYSLAMWLHIALGAGVFFDSWRRKTHPHVWFLNTPVVLWYLADKL 600
+AR+II++ +LMF TM N++ E + RN + +H G + + V HV L+F+P L +G + K L W +L G + +++ D+I+R + +IF ++PLSRS +A K++YSLAM LH+ G D+ R+ TH N P+++ + DK+
Sbjct: 323 TARMIITSQNLMFYTMMCCLPNFICETAPNWITIDGIRNVHSRIHAFAGIFLLAIPSVAHVLLIFVPPLIDGTQLLYYPPSTFNYSKYPDHLNWTKFWDPAALQGWTFN-DHKGVHLTSDEIYRFMLVIVIFCLIVPLSRSNYANKRSYSLAMALHVFAGIWYAIDNIRKITHGLSQVANLPILVLWCIDKI 513
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: A0A3M6UDP3_POCDA (EF-hand domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UDP3_POCDA) HSP 1 Score: 71.2 bits (173), Expect = 3.930e-9 Identity = 55/192 (28.65%), Postives = 94/192 (48.96%), Query Frame = 1
Query: 67 SARLIISTTSLMFLTMCHGTWNYLSEVEIFRPFLYRWRNDNQWLHTVGG-WTMGFWIVVHVWLLFLPWLANG----------YKNVKVGGDLGWPL---QVSLSGGNIDTENRLARWGLDDIWRICWMTLIFGALLPLSRSAWALKKNYSLAMWLHIALGAGVFFDSWRRKTHPHVWFLNTPVVLWYLADKL 600
+ARLII++ +LMF TM N + E+ + RN + +HT G + + + HV ++FLP L +G + + L W ++ G + +++ D+I+R + +IF +PLSRS +A K++YSLAM LH+ G D+ R+ TH N P+++ + DK+
Sbjct: 353 TARLIITSQNLMFYTMMSCLPNLICEIAPNWVTIDGIRNVHTRIHTFAGIFLLAIPSLAHVLIIFLPPLIDGTQLKYYPPSTFNYSEYPDHLNWTKFWDPAAVQGWTFN-DHKGVHLTSDEIYRFMLVIVIFCLFVPLSRSNYANKRSYSLAMALHVFAGIWYAIDNIRKITHGLSQVANLPILVLWCIDKI 543
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Match: A0A1E7FFB7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFB7_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 5.450e-6 Identity = 51/188 (27.13%), Postives = 80/188 (42.55%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEIFRPFLY--RWRNDNQWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLGWPLQV---------SLSG---GNIDTENRLARWGLDDIWRICWMTLIFGALLPLSRSAWALKKNYSLAMWLHIALGAGVFFD 522
D + K GPWSV ++D IAR S R I +L+ LT + I + L N N LH G + ++HVW + P + +GY + G+ WP+ G G+ + E + DD++R+ MTL L+P+S W L+ ++ + LH + F D
Sbjct: 132 DRMEGYKPGPWSVVLYDCIARISGRYSIVCYNLLLLTRMECLEDIFLNSFISKNVLNCTNMVNANIRLHVYNGIALCVLTLLHVWSILFPCIFHGYTAKVILGNFEWPVSERTPTKCSVEEFDGCWPGDANVELKQMGLQADDVFRMVEMTLFLAILMPISIK-W-LQNHWHAGIQLHRIINIIYFVD 317 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig109.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig109.5.1 >prot_A-nodosum_M_contig109.5.1 ID=prot_A-nodosum_M_contig109.5.1|Name=mRNA_A-nodosum_M_contig109.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=618bp DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEback to top mRNA from alignment at A-nodosum_M_contig109:336609..348380- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig109.5.1 ID=mRNA_A-nodosum_M_contig109.5.1|Name=mRNA_A-nodosum_M_contig109.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11772bp|location=Sequence derived from alignment at A-nodosum_M_contig109:336609..348380- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig109:336609..348380- >mRNA_A-nodosum_M_contig109.5.1 ID=mRNA_A-nodosum_M_contig109.5.1|Name=mRNA_A-nodosum_M_contig109.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1854bp|location=Sequence derived from alignment at A-nodosum_M_contig109:336609..348380- (Ascophyllum nodosum dioecious)back to top |