mRNA_A-nodosum_M_contig1086.13.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5LAE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAE2_9PHAE) HSP 1 Score: 135 bits (340), Expect = 3.590e-33 Identity = 80/188 (42.55%), Postives = 104/188 (55.32%), Query Frame = 3
Query: 24 RMVQDPGILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWP---SELPTWL-DNGAKAVLFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGEIVSRDPNGHIKVNEDEAV 575
R D + ++ P IGE E+S VHFIV ++YC WLVTSVDT QWMIILLAM TG + A G AV VTV V +Y VNR+F I+GL + G ++WP S W+ D+ K LFVLV++L+GCDFLPA PF +W L+ + +G F + G V DE +
Sbjct: 495 RRGADRSVQRERGPNIGEAELSLVHFIVWAKKYC---GRNFENWLVTSVDTDQWMIILLAMSTGFLKASGEGAVEVTVHEVVGGDPKYTWVNRVFAVISGLRD-GNESAWPTTDSGFQGWIPDDDEKVRLFVLVYLLAGCDFLPATTGLPFGNMWALALKSVRTEGVFRTSIFVREGGVWGVKIDECI 678
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5JQD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD3_9PHAE) HSP 1 Score: 132 bits (332), Expect = 2.870e-32 Identity = 74/182 (40.66%), Postives = 109/182 (59.89%), Query Frame = 3
Query: 81 EMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWPS-ELPTWLDNGAKAV-LFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGEIVSRDPNGHIKVNEDEAVKIIALTYFYRDRHAF 620
E+ HFIV +Y KL KWLVTSVDT W+IILLAM TGKI+ G D V+VTV R V ++L VNR++ IA L + G ++WP+ + W + V LFVL+++L+GCDFLPAI PF +W L+ + +G F + +G VN ++++ ++A+ +++R AF
Sbjct: 208 ELPVAHFIVWAEKYW---GKKLDKWLVTSVDTDLWIIILLAMSTGKILPYGIDKVDVTVQRIVGGAAKFLWVNRVYNKIADLKD-GSESAWPAADFQGWTPTADEKVRLFVLIYLLAGCDFLPAISGLPFYKMWILALKSVRAEGVFNHALFVMEDGVWTVNIEQSINLLAIIFYFRYEAAF 385
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 132 bits (333), Expect = 3.830e-32 Identity = 82/204 (40.20%), Postives = 114/204 (55.88%), Query Frame = 3
Query: 24 RMVQDP--GILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWPSELPTWL--DNGAKAVLFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGE-IVSRDPNGHIKVNEDEAVKIIALTYFYRDRHAF 620
R DP G+ + P IGE E+S +HFIV +RY KW+V+SVDT WMIILLAM TG + G AV+VTV + V ++L +NR+F +I L + E A P W+ DN K LFVL F+ SGCD+LPAI PF +W L+ + +G F + + +G V+ +E K++A +FY+D AF
Sbjct: 540 RNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYW---GKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDGSESAWPPLTFRGWIPTDND-KVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAF 739
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 132 bits (333), Expect = 4.130e-32 Identity = 82/204 (40.20%), Postives = 114/204 (55.88%), Query Frame = 3
Query: 24 RMVQDP--GILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWPSELPTWL--DNGAKAVLFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGE-IVSRDPNGHIKVNEDEAVKIIALTYFYRDRHAF 620
R DP G+ + P IGE E+S +HFIV +RY KW+V+SVDT WMIILLAM TG + G AV+VTV + V ++L +NR+F +I L + E A P W+ DN K LFVL F+ SGCD+LPAI PF +W L+ + +G F + + +G V+ +E K++A +FY+D AF
Sbjct: 1559 RNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYW---GKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDGSESAWPPLTFRGWIPTDND-KVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAF 1758
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5L577_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L577_9PHAE) HSP 1 Score: 132 bits (331), Expect = 7.120e-32 Identity = 78/207 (37.68%), Postives = 114/207 (55.07%), Query Frame = 3
Query: 6 FLQGRGRMVQDPGILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWPS-ELPTWLDNGAKAV-LFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGEIVSRDPNGHIKVNEDEAVKIIALTYFYRDRHAF 620
L R R + + P +GE E+ HFIV Y KL KWLVTSVDT W+IILLAM TGKI G D V++TV R V ++L VNR++ IA L + G ++WP+ + W+ + V LFVL ++L+G DFLPAI PF +W L+ + G F + +G V+ ++++K++A +++R AF
Sbjct: 819 LLHFRNRSTSGTVVQRKRGPHVGEAELPVAHFIVWAETYW---GKKLDKWLVTSVDTDLWIIILLAMSTGKIPPNGIDKVDITVQRIVGGAAKFLWVNRVYNKIADLKD-GSESAWPAADFQGWIPTADEKVRLFVLTYLLAGSDFLPAISGLPFYKMWILALKSVRAGGVFNRSLFVMEDGVWTVDIEQSIKLLATIFYFRYEAAF 1021
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5L0B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B5_9PHAE) HSP 1 Score: 131 bits (329), Expect = 8.590e-32 Identity = 77/195 (39.49%), Postives = 111/195 (56.92%), Query Frame = 3
Query: 42 GILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWPSELPTWLD-NGAKAVLFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGE-IVSRDPNGHIKVNEDEAVKIIALTYFYRDRHAF 620
G+ + P IGE E+S +HFIV ++Y KW+V+SVDT WMIILLAM TG + G AV+VTV R V ++L +NR+F +I L + E A P W+ + K LFVL F+ SGCD+L AI PF +W +L+ + +G F + + + +G V+ DE K++A +FY+D AF
Sbjct: 266 GVERQRGPDIGEAELSVIHFIVWAKKYW---GESFDKWIVSSVDTDLWMIILLAMTTGWLTPRGERAVDVTVQRVVGGETKFLWMNRVFASICELQDGSESAWPPLTFGGWIPTHDDKVRLFVLTFLESGCDYLRAISGLPFDKMWVLVLKSVRTEGLFDKPLFFEEQDGTWAVDVDECAKLLATLFFYKDEAAF 457
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5JR25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR25_9PHAE) HSP 1 Score: 129 bits (324), Expect = 2.280e-31 Identity = 78/200 (39.00%), Postives = 114/200 (57.00%), Query Frame = 3
Query: 39 PGILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWP-----SELPTWLDNGAKAVLFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGE-IVSRDPNGHIKVNEDEAVKIIALTYFYRDRHAF 620
PG+ + P IGE E+S +HFIV ++Y KW+V+SVDT WMIILL M T + G AV+VT+ + V ++L +NR+F +I L + G ++WP S PT DN K LFVL F+ SGCD+LPAI PF +W L+ + + F + + +P+G ++ DE K++A +FY+D AF
Sbjct: 35 PGVERQRGPDIGEAELSVIHFIVWAKKYW---GKSFDKWIVSSVDTDLWMIILLPMTTDGLRPRGEGAVDVTIQKVVGGETKFLWMNRVFASICELQD-GTESAWPLVTFRSWFPT--DND-KVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEILFDKPLFFEEPDGTWAMHVDECAKLVATMFFYKDEAAF 227
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5KI96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI96_9PHAE) HSP 1 Score: 125 bits (315), Expect = 4.750e-31 Identity = 78/199 (39.20%), Postives = 114/199 (57.29%), Query Frame = 3
Query: 42 GILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWP-----SELPTWLDNGAKAVLFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGEIVSRDP-NGHIKVNEDEAVKIIALTYFYRDRHAF 620
G+ + P IGE E+S +HFIV R+Y KW+V+SVDT WMIILLAM TG + G A++VTV + + ++L +NR+F +I L + G ++WP +PT DN K LFVL F+ SGCD+LPAI PF +W L+ + + F + + D +G V+ DE +++A +FY+D AF
Sbjct: 27 GVERQRGPDIGEAELSVIHFIVWARKYW---GKSFDKWVVSSVDTDLWMIILLAMTTGWLRPRGEGAIDVTVQKVLGGETKFLWMNRVFASICELQD-GSESAWPLLTFRGWIPT--DND-KVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVQTEVLFDKPLFFDEQDGTWAVHVDECAQLLATMFFYKDEAAF 218
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: A0A6H5K590_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K590_9PHAE) HSP 1 Score: 125 bits (315), Expect = 9.550e-31 Identity = 76/199 (38.19%), Postives = 105/199 (52.76%), Query Frame = 3
Query: 24 RMVQDPGILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTVEYLHVNRIFRAIAGLTEIGEHASWPSELPTWLDNGAKAVLFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGEIVSRDPNGHIKVNEDEAVKIIALTYFYRDRHAF 620
R D + ++ IGE E+S VHFIV ++Y S WLVTSVDT QWMIILLAM TG + A G AV VTV V +Y+ VNR+F +I+GL + E S LFVLV++L+GCDFLPA+ PF +W L+ + +G F + G V DE +K++ ++++ F
Sbjct: 164 RRGADRSVQRERGLNIGEAELSLVHFIVWAKKYWGRNS---ENWLVTSVDTDQWMIILLAMRTGFLKASGEGAVEVTVQMVVGGDPKYIWVNRVFASISGLRDSDESVS----------------LFVLVYLLAGCDFLPAMTGLPFGTMWALALKSVRTEGVFRTSIFVRKGGIWGVKIDECIKLLVTMFYFKYEAVF 343
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Match: D7FTC0_ECTSI (Similar to solute carrier family 35, member F4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC0_ECTSI) HSP 1 Score: 124 bits (312), Expect = 2.600e-29 Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 3
Query: 66 GIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTGQWMIILLAMGTGKIVAEGSDAVNVTVARHVRSTV-EYLHVNRIFRAIAGLTEIGEHASWPSELPTWLDNG---AKAVLFVLVFVLSGCDFLPAIVKCPFLLVWESLLRGLAVQGYFGEIVSRDPNGHIKVNEDEAVKIIALTYFYRDRHAFPLTW 632
GIGEGE+ST H I+HH Y G ++R WLVTSVDT Q + ILLAM G+I G D VTV RH V +++ +NR++ A+ A E P WL+ G A+ VLF+++F+LSGCDFLP +++ +L ++ G F + + + NG ++ D+ VK++ + YF + F + +
Sbjct: 1035 GIGEGELSTTHAIIHHALYTGLG--RVRWWLVTSVDTDQIIHILLAMADGRIKPTGDDRTRVTVRRHKGQQVNQFVDMNRVYTALISKPAWNTGAGEGREPPEWLNEGEGEARVVLFLVMFLLSGCDFLPGFYFLKLPKMFQFVLDTISQPGLFSKPIVKKVNGKWTLDIDQCVKMLGVCYFQMHWNIFQVAY 1225 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1086.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1086.13.1 >prot_A-nodosum_M_contig1086.13.1 ID=prot_A-nodosum_M_contig1086.13.1|Name=mRNA_A-nodosum_M_contig1086.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=202bp MVQDPGILKDLYPGIGEGEMSTVHFIVHHRRYCKAGSMKLRKWLVTSVDTback to top mRNA from alignment at A-nodosum_M_contig1086:200060..200691+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1086.13.1 ID=mRNA_A-nodosum_M_contig1086.13.1|Name=mRNA_A-nodosum_M_contig1086.13.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=632bp|location=Sequence derived from alignment at A-nodosum_M_contig1086:200060..200691+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1086:200060..200691+ >mRNA_A-nodosum_M_contig1086.13.1 ID=mRNA_A-nodosum_M_contig1086.13.1|Name=mRNA_A-nodosum_M_contig1086.13.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=606bp|location=Sequence derived from alignment at A-nodosum_M_contig1086:200060..200691+ (Ascophyllum nodosum dioecious)back to top |