mRNA_A-nodosum_M_contig108.32.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: A0A6H5L876_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L876_9PHAE) HSP 1 Score: 226 bits (576), Expect = 7.330e-63 Identity = 108/170 (63.53%), Postives = 133/170 (78.24%), Query Frame = 3
Query: 258 MASSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGTELDDVKLAFTMQFFPGPD---ETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRLPESSGRPKGS 755
MA+SLRY +PDD+I YLLG WKR+LEWREFGP F+H+RTSNSLV + C DAAVEPGT +LDW FG+ D+ KL ++MQFFP + ET VEW+ GRVCRGDF+ AAAVLSLSFRDD+G+VSNATYR +DANTM +CL +VD R+T ++Q+G+MCRL P S
Sbjct: 1055 MAASLRYRLPDDNIYEYLLGSWKRSLEWREFGPGFQHVRTSNSLVMLVPCQDAAVEPGTTMLDWRFGSAPDETKLGYSMQFFPEQEDCGETSVEWNYNGRVCRGDFSHAAAVLSLSFRDDNGVVSNATYRAVDANTMAVCLIDVDSRHTPVMQHGYMCRLSGQETTPDSS 1224
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: A0A1V9ZX25_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX25_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.530e-43 Identity = 75/164 (45.73%), Postives = 106/164 (64.63%), Query Frame = 3
Query: 264 SSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGTEL--DDVKLAFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRLPESSGRP 746
S+ RY VP+ D+C YLLG WKRTLEWR FG +++H+RTSN++V + + AA +PGTR L W FG + +++ A+T+QF P +EW +G C G F P ++V +F + LV+ TYRILDANTM +C+ +VD +T IQYG+M R+ S P
Sbjct: 2 SATRYDVPNGDLCSYLLGTWKRTLEWRNFGSTYKHLRTSNNVVLIEEDTMAAKQPGTRFLKWSFGRGIRKNELTNAYTIQFIPDEQGMFMEWSFEGVTCHGLFKPESSVAIFNFCLQESLVT-ITYRILDANTMAVCIIDVDSEHTPTIQYGNMYRIDPSKYHP 164
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: A0A067D6I0_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D6I0_SAPPC) HSP 1 Score: 152 bits (383), Expect = 1.520e-41 Identity = 74/166 (44.58%), Postives = 104/166 (62.65%), Query Frame = 3
Query: 258 MASSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGTELDDVKL--AFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRLPESSGRP 746
M S+ R+ VPD D C YLLG WKRTLEWR FG +F+H+RT+N++V + + AA +P TR L W FG + +L A+T+QF P T +EW +G C G F P ++V +F + +V+ TYR+LDANTM +C+ +VD + IQYG+M R+ S P
Sbjct: 1 MNSATRFDVPDADFCSYLLGTWKRTLEWRNFGSTFKHLRTTNNVVLIEEDTLAAKQPNTRFLKWSFGRGIRKSELTNAYTIQFIPDEQGTFMEWSFEGVTCHGLFKPESSVAIFNFCLQESMVT-ITYRVLDANTMAVCIVDVDSDHAPTIQYGNMYRIDPSKYHP 165
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: M4C1U8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1U8_HYAAE) HSP 1 Score: 150 bits (380), Expect = 4.000e-41 Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 3
Query: 264 SSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGT--ELDDVKLAFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRLPES 734
S +RY VP D C YL G WKR LEW FG SF+H+RT+N++V + + DAA +P T+ L W FG + D+ A+T+QF P T +EW +G C G F P A+V +L+F + +V+ TYR+LDA+TM +C+ +VD +T IQYG+M R+ S
Sbjct: 7 SVMRYDVPSGDFCSYLKGFWKRNLEWHHFGSSFKHLRTTNNVVFIEEDLDAARQPNTQFLRWSFGRTHKKQDLASAYTVQFIPDEQSTFMEWSFEGVTCHGIFKPEASVATLNFCLQESMVT-ITYRVLDADTMAVCIVDVDSEHTPTIQYGNMYRIDPS 165
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: A0A2D4C766_PYTIN (Uncharacterized protein n=3 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C766_PYTIN) HSP 1 Score: 151 bits (381), Expect = 4.080e-41 Identity = 74/174 (42.53%), Postives = 107/174 (61.49%), Query Frame = 3
Query: 213 PLQSYFSAFGNSRADMASSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGT--ELDDVKLAFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRL 725
P S +A + ++ RY++P D C YL G WKR LEWR FG SF+ +R++N++V + + PDAA +P T+ L W FG + D+ A+T+QF P + T +EW +G C G F P A+V +F D +V+ TYRILDANTM +C+ +VD +T IQYG+M R+
Sbjct: 2 PAMSAAAATTAAATSAVNAARYAIPKGDFCSYLKGFWKRNLEWRHFGASFKLLRSTNNVVQIEEDPDAARQPNTQFLKWSFGRSHKKQDLVSAYTIQFIPDEEGTFMEWSFEGVTCHGVFKPEASVAIFNFCLQDSMVT-ITYRILDANTMAVCIVDVDSEHTPTIQYGNMYRI 174
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: K3WP12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP12_GLOUD) HSP 1 Score: 149 bits (375), Expect = 2.430e-40 Identity = 69/158 (43.67%), Postives = 104/158 (65.82%), Query Frame = 3
Query: 261 ASSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGT--ELDDVKLAFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRL 725
++ +RY + D D CG+L G WKR LEWR FG SF+H+R++N++V + + DAA +P T+ L W FG +++D+ A+T+QF P T +EW +G C G F P ++V +F + +V+ TYRILDANTM +C+ +VD +T IQYG+M R+
Sbjct: 9 SNPVRYEIADGDFCGFLKGFWKRNLEWRHFGGSFKHLRSTNNVVFIEEDLDAAHQPNTQFLKWSFGRTHKIEDLVSAYTIQFIPDEQGTFMEWSFEGVTCHGVFKPESSVAIFNFCLQESMVT-ITYRILDANTMAVCIVDVDSEHTPTIQYGNMYRI 165
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: A0A8K1CIW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIW5_PYTOL) HSP 1 Score: 149 bits (375), Expect = 3.180e-40 Identity = 69/153 (45.10%), Postives = 102/153 (66.67%), Query Frame = 3
Query: 276 YSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGT--ELDDVKLAFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRL 725
Y+VP+DD C YL G WKR LEW+ FG SF+H+R++N++V + + +AA +P T+ L WCFG + +D+ A+T+QF P T +EW +G C G F P A+V +F + +V+ TYRI+DANTM +C+ +VD +T IQYG+M R+
Sbjct: 23 YAVPNDDFCSYLKGFWKRNLEWKHFGLSFKHLRSTNNVVFIEEDLEAARQPNTQFLRWCFGRSHKREDLVSAYTIQFIPDEQGTFMEWSFEGVTCHGVFKPEASVAIFNFCLQESMVT-ITYRIVDANTMAVCIVDVDSEHTPTIQYGNMYRI 174
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: W7TN20_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN20_9STRA) HSP 1 Score: 147 bits (371), Expect = 7.740e-40 Identity = 74/159 (46.54%), Postives = 98/159 (61.64%), Query Frame = 3
Query: 258 MASSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGTELD--DVKLAFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNTLIQYGHMCRLP 728
M ++L Y VP D YLLG WKRTLE REFG S+EH RTSNS+V + A EP T L+W FG L+ D+KL F M F PD T +EW + C G F P+ +V +L+FR D + TYR++D +TM + + EV+ + + +QYGHM RLP
Sbjct: 1 MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTT-VTYRVVDEDTMAVSIVEVESQRSSVQYGHMLRLP 158
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: D0P0D5_PHYIT (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0P0D5_PHYIT) HSP 1 Score: 147 bits (371), Expect = 9.550e-40 Identity = 72/158 (45.57%), Postives = 100/158 (63.29%), Query Frame = 3
Query: 270 LRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGTEL--DDVKLAFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRLPES 734
+RY VP+ D C YL G WKR LEWR FG SF+H+R++N++V + + DAA +P T+ L W FG L D+ A+T+QF P T +EW +G C G F A V L+F + +V+ TYR+LDANTM +C+ +VD +T IQYG+M R+ S
Sbjct: 12 VRYDVPNGDFCAYLKGFWKRNLEWRRFGASFKHLRSTNNIVFIEEDLDAAGQPNTQFLRWSFGRTLKQQDLSSAYTVQFIPDEQGTFMEWSFEGVTCHGVFKLEANVAILNFCLQESMVT-ITYRVLDANTMAVCIVDVDSEHTPTIQYGNMYRINPS 168
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Match: A0A024UKI4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UKI4_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.680e-39 Identity = 72/163 (44.17%), Postives = 103/163 (63.19%), Query Frame = 3
Query: 264 SSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCPDAAVEPGTRLLDWCFGTEL--DDVKLAFTMQFFPGPDETVVEWDNKGRVCRGDFNPAAAVLSLSFRDDDGLVSNATYRILDANTMTLCLAEVDKRNT-LIQYGHMCRLPESSGR 743
S+ R+ V D D YL+G WKRTLEWR FG SF H+RT+N++V + + AA +P T L W FG L +++ +A+T+QF P T +EW +G +C G F P A+V +F + +V+ TYRILDANTM +C+ +VD +T IQYG+M R+ + R
Sbjct: 2 STTRFDVKDGDFAAYLVGTWKRTLEWRNFGSSFGHLRTTNNVVVIEEDTTAAKQPNTTFLKWSFGRGLRKNELTVAYTIQFIPDNKGTFMEWSFEGAMCHGLFKPEASVAIFNFCLHESMVT-ITYRILDANTMAVCIVDVDSDHTPTIQYGNMYRIDPAKYR 163 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig108.32.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig108.32.2 >prot_A-nodosum_M_contig108.32.2 ID=prot_A-nodosum_M_contig108.32.2|Name=mRNA_A-nodosum_M_contig108.32.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=167bp MASSLRYSVPDDDICGYLLGVWKRTLEWREFGPSFEHIRTSNSLVTVHDCback to top mRNA from alignment at A-nodosum_M_contig108:325204..332525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig108.32.2 ID=mRNA_A-nodosum_M_contig108.32.2|Name=mRNA_A-nodosum_M_contig108.32.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7322bp|location=Sequence derived from alignment at A-nodosum_M_contig108:325204..332525- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig108:325204..332525- >mRNA_A-nodosum_M_contig108.32.2 ID=mRNA_A-nodosum_M_contig108.32.2|Name=mRNA_A-nodosum_M_contig108.32.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=501bp|location=Sequence derived from alignment at A-nodosum_M_contig108:325204..332525- (Ascophyllum nodosum dioecious)back to top |