mRNA_A-nodosum_M_contig108.2.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig108.2.1
Unique NamemRNA_A-nodosum_M_contig108.2.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 530 bits (1366), Expect = 1.070e-171
Identity = 309/704 (43.89%), Postives = 405/704 (57.53%), Query Frame = 1
Query:    1 LRVGTLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYHCYARCGERTASTRGVALLLSKSESGYPVGRSSPWSIFVRCTGTQLAQPWIVASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNRTRCQVARFVRAVDPEFEVLEPVAGGRVDTRGTRRR-SDRTIDHIAVRMVG-RATKTAPKVLRDVDISDHYPVVGTIACPKGDGEGGTQESVRTKTTT------------------------PRRKIDKERQVVA--------------------------DAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASEHLQTEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAEE--PTPMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGFDKGAP 1950
            L+V TLN+NGV+ K++ L+ +L   RI C+ALQET L  TDW LN+PGY  +A  GERT+STRG A+LL        VG+SSPW  FVRC G                    G  P++ ++ Q++ LR ++P+D++ +MGD+NR R +V ++         V E + G   D  GTR   S R IDHI   +   + T  AP+VLR VDISDHYPVV T    + D   G    V     T                        PR + + ++ + A                          DA A R VE  H+VA E G T    T     LK +I + I  R + Y  A +   ++  +  AW  Y   + +A   V KD R  W + +  ASE L+++P+  W + S +AGW  +    G+QPV+H  S +LLT    ISAAWR HY RLAAD TGNS+  D+W  W   PQR+H+  LD  I   EM+EAL RI+R+K+PG DG+PAD L+LA  EE   +PMG  +L +LN +WK+  IP+  R STVV IPKKGD+TDM N+RGISLM T LKVLV+++STRLN AFE+  +FS++QAGFR +EECVTQ+ACLLEI +RRK      Y++FVDLKKAYDTVPQEAL AKL FYGVRG  L FIRALY+ S+I VR G  +S+   L RG  +G P
Sbjct:   33 LKVATLNINGVKSKKIQLQRVLAMYRINCIALQETTLTVTDWALNVPGYRTFAVYGERTSSTRGAAILLRNKMGAQTVGKSSPWHTFVRCYGL-------------------GKVPLRTVRNQMRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYESIRVWE-LTGKDADL-GTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADASTGDSVGVPINARTIQRGERINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCP 715          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 251 bits (642), Expect = 2.470e-68
Identity = 205/610 (33.61%), Postives = 294/610 (48.20%), Query Frame = 1
Query:  298 IVASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNRTRCQVARFVRA--VDPEFEVLEPV-AGGRVDTRGT-RRRSDRTIDHIAV--RMVGRATKTAPKVLRDV--DISDHYPVVGTIACPKGDGEGGTQE-------SVRT-----------KTTTPRRK---------------------IDKERQVVADAMAERFVETCHRVAEESGLTATPRTP--GPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASEHLQTEP--RNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSP----DRWTRW-GQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAEEPTPMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVG---GTVSEPADLLRGFDKGAP 1950
            I  SVY+P+G S+G     +++E++  LRE+FP D + + GDWN    Q+   +R     P+ + + P  A  RV  RGT RR S R IDH      ++G +      V  D   D SDH+PV  ++    GD              SVR+           +  TP R                      + +E   + DA A+ FV+     A   G  +  R    GP PL++ I+  I  R  A++ A+         + A   Y A +      V  + R +  R I KA    +     R FWKWA +IA   P       QPV    SG L TE   I+A W  HY  L  DP   +       + W R  G  P    L+ ++  I   E+ +AL R+  NKA G DGI A+ LKLA+    +P G +LL ++N +W +  +P  W +S VVSI KKGD+T M NYRGIS+M   +K+L+ V++ RL    +   +  + Q GF   EEC  Q A + +I  RR+ +GLPTY  F+DL+KAYDT+P E L +KL+  G+ G  L F++ALY  S +QV+ G   G +S+P  + RG  +G P
Sbjct:   10 IFISVYLPTG-SQGEPYRCRLREELAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARV--RGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVFASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSI-DADADGFVQAVWSTARRVGAVSRTRRKSLGP-PLQRSILGAIARRRHAFL-ALCQEARGPIQSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAIYAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCP 613          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 248 bits (632), Expect = 1.770e-66
Identity = 197/670 (29.40%), Postives = 315/670 (47.01%), Query Frame = 1
Query:    1 LRVGTLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYHCYARCGERTASTRGVALLLSKSESGYPVGR--SSPWSIFVRCTGTQLAQPW--IVASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNR-TRCQVARFVR-AVDPEFEVLEPVAGGRVD--TRGTRRRSDRTIDHIAVR-MVGRATKTAPKVLRDVDISDHYPVVG--------TIACPKGDGEGGTQESVRTKTTTPRRKIDKERQVVADAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASE-HLQTEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGFDKGAP 1950
            L+V T N+ G  GK+ ++  L +  +   LALQET L A    L + GY          A  RG+A+ + K   G  +     +P  +    TGT   +    ++ ++++P   +     +  + + ++ LR +   D + + GD+N+ T   VA   R  +      +    G R++  T G      R IDHI+   ++     T  KVL+ VD+SDH PV+         +   P+       +E   +  +  R     E +   + +  R  +     AEE       +      L K  ++    R KA+ + +   P T T       Y   K++++     D R   K  ++KA +  L  + R+ W W    +G   R + S +    +     L+T+  A +  W  H+ +LA D TGNS+S D+W   G           D  + + E+ +AL     NK+PG DGIP+++ KL   E EPT P+   +  ++N++W S  +P     S VV IPKKGD+ D  NYRGISL+ T  KV+  +++ RL     K  I +K QAGFR +EECV Q+  L E+ +RRK+ GL T++ F+D  KAYD VP +AL+ K+   G+  +    I ALY   ++ VRVGG +S+  +   G  +G P
Sbjct:  198 LKVMTFNIRGYIGKREEVDLLFQQYQPTILALQETNLNAKSNRLRLQGYQTVESKSHLRAGGRGLAIGVRKG-LGLSISEMTQTPHWMAAEITGTSRGKKMTLLIINIHMPHQTNRRKLVIAALTKYLRKLRIKGRKDKIMLAGDFNKNTDSTVALLNRIGIGLRRATVTNSKGSRMNGATMG------RMIDHISFSGLINNPNYT--KVLKSVDLSDHLPVMAEWNIEALDSPTVPRKINVESIKELGESFVSNNRFAALTEPEFNIEDLTSRLTKGIWESAEEVNAIKIEKISNSTVLSKETIKATNKRRKAFKRLI-GDPRTATE------YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSG---RFRSSLIDGPVYNNDHKLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTI--AAVFPECDAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCP 846          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A1R1XKG1_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XKG1_9FUNG)

HSP 1 Score: 243 bits (619), Expect = 1.040e-64
Identity = 186/670 (27.76%), Postives = 317/670 (47.31%), Query Frame = 1
Query:    4 RVGTLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYHCYARCGERTASTRGVALLLSKSESGYPVGRSSPWSIFVRCT-------GTQLAQPWIVASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNRTRCQVARFVRAVDPEFEVLEPVAGGRVDTRGTRRRSDRTIDHIAVRMVGRATKTAPKVLRDVDISDHYPVVGTIACPKGDGEGGTQESVRTKTTTPRRKIDKERQVVA--------DAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASE-HLQTEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQR--KHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAEEPTP---MGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGFDKGAP 1950
            R  + NV G++G +  L ++LE  +   + LQET+L        I GY             RG+ L+  K++ G  +     +  ++ C        G +     ++ + ++PS        +K+I    +  + +     + +MGD N    +   F   +   F+           +R  + +  R IDH+    + ++     K+L+ VD+SDH P+       +   +    +   +K    ++ I    +           D  A++      ++ EE+G  ++ ++        + ++ I+ R K ++   K   + +        Y   K +A+    +D + K  R I+KA + +L+  PR  W+W    A       + G    +H    +++T+       W DH+  LA D +GNS+  D+W   G+  QR  ++ E  D++I + ++  A+     NKAPG DGIP++L KL V EE  P   +   L+ +L +MW S+ IP  +  S +V IPKKGD  D  NYRGISL+ T +K+L  +++ +LN    K  +  K QAGFR +EECV+Q+  L E+ +RRK+ G+PT++ F+D  KAYD VP EAL++KL    + G+    I ALY   RI VRVG ++S   +  RG  +G P
Sbjct:  464 RCFSYNVQGIKGIKDQLEFVLEKYQPTLICLQETMLTEKSSRCMIHGYTSVEVKTNIRRGGRGL-LVAVKNDLGIKINEMESFPNWMACEISGKYKDGNKFES--VIVNAHIPSDPKRRKIVVKQISVFCRRKKNKNNKMPILMMGDLNMDTLKSLSFSNRIGIGFQRANVFNS--TGSRMNKGKIGRMIDHLFYCGI-KSKPVFAKILKSVDLSDHLPLFAEWNIQELKPQPKNIKINTSKLLNHKKNIINNNRFAVLANMKDGIDDHAKKIYGNIWKMCEENGYLSSQKSKKFGLFSDKTIKLIEKRRKLFLGYQKGECNLER-------YTTAKNDAVDSRREDYKKKSNREIKKACKLYLENNPRFLWRWLKYQAKRFNASSIDGPIFDRHR---NIVTDGLEKEKVWADHFEELAKDVSGNSKCADKW---GEIEQRHNEYYEECDKNITWDDIRRAIKVTPNNKAPGIDGIPSELWKL-VQEEKNPESYLSKLLVELLLKMWNSAHIPEIFNTSIIVPIPKKGDPRDTNNYRGISLIPTLVKILAKIVAQKLNELDFKYNLLVKEQAGFRSREECVSQATVLYEVVRRRKIKGIPTWIGFIDFAKAYDRVPHEALLSKLKSQKIGGQLHRVISALYKSPRICVRVGNSISRKFEYSRGVRQGCP 1113          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 239 bits (609), Expect = 8.150e-64
Identity = 198/670 (29.55%), Postives = 304/670 (45.37%), Query Frame = 1
Query:    1 LRVGTLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYHCYARCGERTASTRGVALLLSKSESGYPVGR--SSPWSIFVRCTGTQLAQP---WIVASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNRTRCQVARFVRAVDPEFEVLEPVAGGRVDTRGTRRRSDRTIDHIAVRMVGRATKTAPKVLRDVDISDHYPVVG-----TIACPKGDGEGGTQESVRTKTTTPRRKIDKERQVV-------ADAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASE-HLQTEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGFDKGAP 1950
            L+V T N+ G   K+ ++   L   +   + LQET L A    L I GY       +  A  RG+A+ + K E G  +     SP  +  + +GT  +      IV ++++P         +  +   ++ LR +     + ++GD+N+        +  +     +   V      +R       R IDH+A          A KVL+ VD+SDH PV+      ++  P       T++  +  T    R I   R  V        + +      +    AEE     T +      L    ++ I+ R K + +  K  PS          Y   K++++    +D R   K  + KA +  L  + R  W W    +G      V G  P+ +  S  L+T+    +  W  H+  LA D TGNS+S ++W   G        E  D  + +TE+  AL     NK+PG DGIP++  KL   E EPT P    LL ++N +W +  IP     S VV IPKKGD+ +  NYRGISL+ T  KV+  ++S RL     K  I +K QAGFR +EECV Q+  L E+ +RRK+ GL T++ F+D  KAYD VP +AL+ K+   G+RG+    I ALY   ++ VRVG  +S+  +   G  +G P
Sbjct:   20 LKVMTFNIRGYVSKREEIDLFLRQYQPTLITLQETNLNAKSNRLRIQGYQTVESKSQLRAGGRGLAIGVRK-ELGLSISELSQSPHWMATKISGTHSSGEKLSLIVVNLHMPHQTMRRKLVIWGLTNYLRKLRSKKKKTKILLVGDFNKDIKSTVSMLNRIG--IGLRRAVVSNSKGSRMNNATMGRMIDHVAYTGFANNPNYA-KVLKSVDLSDHLPVIAEWNIESLKIPLPPKRIDTEKMKKQGT----RFISDNRFAVLASLEPNTENLVNSVTTSIWETAEELDALKTMKAGYRRVLSNETLETIRKRRKVFKKLSKD-PSLAIE------YSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNK-SRQLVTDSETKAEVWAAHFEELARDSTGNSRSAEKWRDIGSDSTEVFTE-CDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCP 670          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 238 bits (607), Expect = 4.430e-63
Identity = 205/680 (30.15%), Postives = 314/680 (46.18%), Query Frame = 1
Query:    1 LRVGTLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYHCYARCGERTASTRGVALLLSKSESGYPVGR--SSPWSIFVRCTGT-QLAQPWIVASV--YVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNR-TRCQVARFVR-AVDPEFEVLEPVAGGRVDTRGTRRRSDRTIDHIAVRMVGRATKTAPKVLRDVDISDHYPVVGTIACPKGDGEGGTQESVRTKTTTPRRKIDKER------------------QVVADA--MAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASEHLQT-EPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAV-AEEPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGFDKGAP 1950
            L+V T N+ G   K+ +L  +L+  R   +ALQET L A    L +  Y          A  RG+AL + K  SG  +     +P  +  + +G  +  + + +A V  ++P         +  +   ++ +R++     + ++GD+N+ T   ++   R  +      +    G R++         R IDHI          T  KV++ VD+SDH PVV      + D E         K   P+RKID ER                  Q+  D   +AE   E   R A+E       +      L K  +  I+ R K + + +   PS          Y   K++A      D R+     ++KA E + T +PR  W W    +G      + G    K+     L+T     S AW  H+  LA D TGNS+S ++W+  G   +  + E  D  + +TE+  AL     NK+PG DGIP+++ KL    EEPT P       ++N++W+   IP     S +V IPKKGD+ D  NYRGISL+ T  KVL  +++ RL+    K  I  K QAGFR +EECV Q+  L E+ +RRK+ GL T++ F+D  KAYD VP +AL+ K+   G+ G+    I ALY   ++ VRVG  +S+  +   G  +G P
Sbjct:  644 LKVMTYNIRGYISKREELDLVLKQNRPSVIALQETNLNAKTNRLRLQEYVTVESKSHLRAGGRGLALGIRKG-SGLSISELIQTPHWLAAKISGAHENDKRFSLACVNLHMPHQTIRRKLVIIGLTRFLRKMRQKKKKSKIMLIGDFNKDTESTISMLNRIGIGLRRATVRNSKGSRMNGAVM----GRMIDHITYSGFPN-NPTYAKVIKSVDLSDHLPVVA-----EWDMEA-------LKIPAPQRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAADELSCIKEEKQRFKTVLSKETLNAIQRRRKLF-KGISKNPSLSEE------YSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSGRFLSSLIDGPIFDKNR---KLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVYTE-CDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCP 1294          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A1R1XWS1_9FUNG (Transposon TX1 protein (Fragment) n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XWS1_9FUNG)

HSP 1 Score: 231 bits (589), Expect = 8.800e-63
Identity = 192/669 (28.70%), Postives = 307/669 (45.89%), Query Frame = 1
Query:   13 TLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYHCYARCGERTASTRGVALLLSKSESGYPVGRSSPWSIFVRCTGTQLAQ-----PWIVASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWN----RTRCQVARFVRAVDPEFEVLEPVAGGRVDTRGTRRRSDRTIDHIAVRMVGRATKTAPKVLRDVDISDHYPVVGT---------IACPKGDGEGGTQESVRTKTTTPRRKIDKERQVVADAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASE-HLQTEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIP--YTEMLEALNRIRRNKAPGQDGIPADLLKLAVAEEP--TPMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGFDKGAP 1950
            T N+ G  GK+ ++  L  + +   +ALQET L A    + + GY          A  RG+A+ + K ESG  +        ++  + + L          VA++++P   +     +  + + ++ L  +  +  + ++GD+N    RT C + R          +   V      TR    +  R IDHIA      +     KVL+ VD+SDH PVV           I   K D E   + S  + T+  R  I  ++++  + +  R   +    +EE  +  T +      L K  +Q IK R K + +  K              Y   K++A+    +D R   K  I K S+  L  + R  W W    +G   R K S         +  L+T+    +  W  H+  LA D TGNS+   +W    +  +R    Y + DI   +TE+  AL     NK+PG DG+P+++ KL   E+   +P    +  +++ +W +  IP     S ++ IPKKGD+ D  N+RGISL+ T  KV+  V++ RL     K  I +K QAGFR +EECV Q+  L E+ +RRK+ GL T++ F+D  KAYD VP +AL+ K+   G+ G+    I ALY   ++ VRVG  +S+  +   G  +G P
Sbjct:    2 TYNIRGYVGKRDEIDLLFSDYQPTIMALQETNLNAKSNRMRLQGYQTVESKSTLRAGGRGLAIGVRK-ESGLSISEMCQTPHWMTASVSGLFNNGNKISLFVANLHMPHQTNRRKLAILGLTKYLRKLHSKKKNSKILLLGDFNKDTQRTLCLLNRI------GIGLRRAVVYNSKGTRMNMGKMGRMIDHIAYSGFSNSPNYT-KVLKSVDLSDHLPVVSEWKIDSLKTPIPSIKIDAEK-IKNSGESFTSNNRFLILADQEMDPETLVNRINTSIWETSEELAVIKTDKKHSTV-LSKETIQTIKKRRKVFRKVSKDVSFEKE-------YSELKEKAIQLCREDRRNNKKAEINKVSDLMLGKKSRELWSWLKRFSG---RFKSSATDGPIFDKNKKLITDAEEKADTWATHFEGLAKDNTGNSRIAKKW----KSLERTSEIYKECDIQLTWTEICAALKSTPNNKSPGFDGVPSEVWKLVQHEDVPNSPFAKIIHKLISGIWDTERIPKQMDPSVIIPIPKKGDMRDPNNFRGISLIPTLAKVVSKVIARRLCDIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWVGFIDFAKAYDRVPHQALLCKIKNSGIGGKLYRMIEALYRSPKMCVRVGDKISKLVEYNCGVRQGCP 646          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A498SLY1_ACAVI (Reverse transcriptase domain-containing protein n=1 Tax=Acanthocheilonema viteae TaxID=6277 RepID=A0A498SLY1_ACAVI)

HSP 1 Score: 228 bits (582), Expect = 5.030e-62
Identity = 165/533 (30.96%), Postives = 260/533 (48.78%), Query Frame = 1
Query:  367 QVKALREEFPDDAMAIMGDWNRTRCQVARFVRAVDP------EFEVLEPVAGGRVDTRGTRRRSDRTIDHIAVRMVGRATKTAPKVLRDVDISDHYPVVGTIACPKGDGEGGTQESV------RTKTTTPRRKI----------DKERQVVADAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASEHLQTEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAEEPT------PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRI 1881
            Q++   + FPD  + +MGDWN T+ ++  ++  V P        +VL     G   T       +  ID I    + R+  ++ +V R  D+SDHYP+   + CP        +++       R K    +  I          D E + V +A AE F      V+ +  L +  + P    L K+  + IK +   +    K      +S      Y+  +K     ++ + + KW   I   +E  + EPR F++W  N+ G     K+    P+K   +G L      I+  WR+HY  L  D TG+S++ + W+++     R  +E  +    ++E++ A+  +  NKA G DGIPA+  KL   +  T       +G  L ++  ++W S  IP++W  + ++SIPKKGDLT   NYRGISL+    K+L  +LS+R++   E  GI  K QAGFR++EEC+ Q   L+E  +RRK  G PTY+ F+D KKAYD V  EAL  K+   G+ G+TL  I+ LY  S I
Sbjct:   34 QLEQSSDRFPDAPLIMMGDWNMTKKELKAWLSTVLPLGSLCNGLDVLN--CDGCDSTFHRSNCKNSAIDFIICNSIARSFLSSCRVDRGCDLSDHYPI-SALFCPSNTIVNTEKKNSLMYNMNRNKVVANKESIVCHNRFDILSDLESEDV-NATAENFESAVKLVSSDLHLMSRNKKPARLCLSKKTRKAIKIKNSLF----KMCQCKGSSMADLDAYKKARKGVTNLIKTEKKNKWFNHIANGAEFRKHEPRMFFRWLKNLVGVKSYPKLG---PLKDK-NGVLQVTPEKIAEVWREHYRNLFEDSTGHSKNKEYWSKF-PIHIRSTVELSNIPFSWSEIVLAVRSLSTNKAAGPDGIPAEFFKLINNDMDTGLAPCTKLGKFLFSIFEKVWVSGKIPNSWNLAKIISIPKKGDLTITDNYRGISLIPVISKILSKMLSSRISYHLESNGIICKEQAGFRKREECLGQVIALVEAIQRRKHKGEPTYLAFIDFKKAYDMVAHEALFLKMTGVGISGKTLDLIKDLYKNSSI 553          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG)

HSP 1 Score: 229 bits (585), Expect = 1.550e-60
Identity = 197/668 (29.49%), Postives = 310/668 (46.41%), Query Frame = 1
Query:   13 TLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYHCYARCGERTASTRGVALLLSKSESGYPVG--RSSP-WSIF----VRCTGTQLAQPWIVASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNR-TRCQVARFVR-AVDPEFEVLEPVAGGRVD--TRGTRRRSDRTIDHIAVRMVGRATKTAPKVLRDVDISDHYPVVG--------TIACPKGDGEGGTQESVRTKTTTPRRKIDKERQVVADAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASE-HLQTEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGFDKGAP 1950
            T N+ G  GK+ ++  ++   +   LALQET L A    L + GY          A  RG+A+ + K E G  V   R +P W       V   G +L     V ++++P   +     + ++ + ++ LR +     + +MGD+N+ T   ++   R  +      +    G R++  T G      R IDH+A      +   A KVL+ VD+SDH PV+         T   PK       +E   +  +  R  +  ++    + + +    +    AEE     T  +     L    ++ I+ R K + +  K  PS +        Y   K++A+    +D R   K  ++KA +  L  + R  W W    +G   R + S V+      +  L+TE    +  W  H+  LA D TGNS+S ++W   G        E  D  + + E+  AL      K+PG DGIP++  K    E EPT P    L  ++ ++W + +IP     S VV IPKKGD+ +  NYRGISL+ T  KV+  ++  RL     K  I +K QAGFR +EECV Q+  L E+ +RRK+ GL T++ F+D  KAYD VP EAL+ K+   G+ G+    I ALY   ++ VR+GG +S+  +   G  +G P
Sbjct:    2 TFNIRGSIGKREEVDLVMRQYQPTILALQETNLNAKSNRLRLQGYQTIESKSHLRAGGRGLAIGVRK-ELGISVSELRQTPHWMAGAVSGVHNNGEKLKL--FVINLHLPHQTNRRKLAILELTKYLRKLRSKKRKAKIVLMGDFNKDTNSTISMLNRIGIGLRRADVNNSKGSRMNGVTMG------RMIDHVAYSGFLNSPNYA-KVLKSVDLSDHLPVISEWNIESLKTPVPPKRIDTAKMKEIGESFISNNRFSVLADQDSNTENLVDSVTTSIWETAEELDALKTTPSEYRRVLSNETLETIRKRRKMFKKLAKD-PSIEME------YSDLKEKAIQLCREDRRNNRKAEVKKACDLMLGNKSRELWSWLKRFSG---RFRSSLVEGPIFDKNKKLVTESEKKAEVWAAHFEELAKDSTGNSRSAEKWHGMGNDSAGVFTE-CDTPLSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCP 648          
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Match: A0A1R1XIW6_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XIW6_9FUNG)

HSP 1 Score: 227 bits (578), Expect = 7.630e-60
Identity = 182/628 (28.98%), Postives = 291/628 (46.34%), Query Frame = 1
Query:    1 LRVGTLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYHCYARCGERTASTRGVALLLSKSESGYPVGR--SSPWSIFVRCTGTQLAQP---WIVASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNRTRCQVARFVRAVDPEFEVLEPVAGGRVDTRGTRRRSDRTIDHIAVRMVGRATKTAPKVLRDVDISDHYPVVGTIAC--------PKGDGEGGTQESVRTKTTTPRRKIDKERQVVADAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYIQAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASE-HLQTEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRG 1836
            L+V T N+ G   K+ ++  +L   +   L LQET L A    L I GY             RG+A+ + K E G  +     SP  +  + +GT  +      IV ++++P         +  + + ++ LR +     + ++GD+N+        +  +     +   V      +R       R IDH+A          A KVL+ VD+SDH PV+             PK       +E  ++ T+  R  +  ++++  + +     ++ +  AEE     T        L K  ++ I+ R KA+ + +K  PS +        Y   K++A+    +D     K  ++KA +  L  + R  W W    +G      V G    K+     L+T+  A +  W  H+  LA D TGNS+S  +W   G+    +  E  D  + + E+  AL     NK+PG DGIP+++ K+   E EPT P+   +L ++  +W +  IP     S V+ IPKKGD+ D  NYRGISL+ T  KVL  +++ RL     K  I +K QAGFR +EECV Q+  L E+ +RRK+ GL T++ F+D  KAYD VP EAL+ K+   G+ G
Sbjct:  392 LKVMTFNIRGYVSKREEIDLVLRQYQPTLLMLQETNLNAKSNRLRIQGYQTVESKSHLRTGGRGLAIGVRK-ELGLSISELSQSPHWMATKISGTHSSGEKLSLIVVNLHMPHQTMRRKLVILGLTKYLRKLRSKKKKTKILLVGDFNKDIKSTVSILNRIG--IGLRRAVVSNSKGSRMNNATMGRMIDHVAYTGFSNNPNYA-KVLKSVDLSDHLPVIAEWNIENLKIPVHPKRIDTSKVKELRQSFTSNNRFAVLADQELNTENLVNGVTKSIYETAEELDALKTISFDHRRVLSKETLETIRKRRKAFKKLLKD-PSVEIE------YSDLKEKAIQLCRQDRMNNKKAEVKKACDLMLCNKSRELWSWLKRFSGRFSSSLVDGPIFDKNR---QLITDSEAKAEVWASHFEELAKDSTGNSRSAKKWRDIGKNYTAEFNE-CDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGG 1004          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig108.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE1.070e-17143.89Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO2.470e-6833.61Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A1R1X7T5_9FUNG1.770e-6629.40RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1XKG1_9FUNG1.040e-6427.76RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YAQ4_9FUNG8.150e-6429.55RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YP44_9FUNG4.430e-6330.15LINE-1 retrotransposable element ORF2 protein (Fra... [more]
A0A1R1XWS1_9FUNG8.800e-6328.70Transposon TX1 protein (Fragment) n=2 Tax=Smittium... [more]
A0A498SLY1_ACAVI5.030e-6230.96Reverse transcriptase domain-containing protein n=... [more]
A0A1R1X4V9_9FUNG1.550e-6029.49Putative RNA-directed DNA polymerase from transpos... [more]
A0A1R1XIW6_9FUNG7.630e-6028.98LINE-1 retrotransposable element ORF2 protein (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig108contigA-nodosum_M_contig108:18555..20687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog5297.GMQ_19178T0
PFAMsDUF4283,Exo_endo_phos_2,RVT_1
Model size1989
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.27e-45
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota
DescriptionRibonuclease H protein
Cds size1989
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866464.3915484-CDS-A-nodosum_M_contig108:18554..198071680866464.3915484-CDS-A-nodosum_M_contig108:18554..19807Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig108 18555..19807 -
1680866464.403663-CDS-A-nodosum_M_contig108:19951..206871680866464.403663-CDS-A-nodosum_M_contig108:19951..20687Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig108 19952..20687 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig108.2.1prot_A-nodosum_M_contig108.2.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig108 18555..20687 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig108.2.1

>prot_A-nodosum_M_contig108.2.1 ID=prot_A-nodosum_M_contig108.2.1|Name=mRNA_A-nodosum_M_contig108.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=663bp
LRVGTLNVNGVRGKQVDLRYLLENRRIGCLALQETLLRATDWNLNIPGYH
CYARCGERTASTRGVALLLSKSESGYPVGRSSPWSIFVRCTGTQLAQPWI
VASVYVPSGKSEGATPMKKIQEQVKALREEFPDDAMAIMGDWNRTRCQVA
RFVRAVDPEFEVLEPVAGGRVDTRGTRRRSDRTIDHIAVRMVGRATKTAP
KVLRDVDISDHYPVVGTIACPKGDGEGGTQESVRTKTTTPRRKIDKERQV
VADAMAERFVETCHRVAEESGLTATPRTPGPEPLKKRIVQRIKARTKAYI
QAMKTTPSTDTSNGAWAVYEARKKEAMAEVEKDNRAKWKRRIQKASEHLQ
TEPRNFWKWASNIAGWSPRCKVSGVQPVKHAGSGSLLTEVTAISAAWRDH
YGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIR
RNKAPGQDGIPADLLKLAVAEEPTPMGNALLAVLNQMWKSSTIPSAWRNS
TVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSTRLNGAFEKEGIFSK
AQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEA
LMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGFDKGAP
CRLFCSTYSLMM*
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mRNA from alignment at A-nodosum_M_contig108:18555..20687-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig108.2.1 ID=mRNA_A-nodosum_M_contig108.2.1|Name=mRNA_A-nodosum_M_contig108.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2133bp|location=Sequence derived from alignment at A-nodosum_M_contig108:18555..20687- (Ascophyllum nodosum dioecious)
TTAAGGGTGGGTACTCTAAACGTCAATGGAGTGCGGGGTAAACAAGTCGA CCTCCGCTATCTACTGGAGAACAGACGAATTGGATGCCTGGCGCTACAAG AGACATTATTGCGTGCAACGGATTGGAACCTCAACATCCCCGGTTATCAT TGCTATGCGAGATGCGGGGAGCGGACTGCCTCTACCAGAGGGGTAGCTCT GCTTCTTAGCAAATCCGAGAGTGGATACCCGGTGGGCCGTAGCTCACCGT GGTCGATATTCGTGCGATGTACGGGGACCCAACTAGCCCAACCCTGGATA GTGGCAAGTGTGTATGTACCTTCTGGCAAATCCGAGGGGGCAACCCCGAT GAAGAAAATACAGGAACAAGTAAAAGCGTTGAGGGAGGAATTTCCCGATG ACGCAATGGCCATCATGGGCGACTGGAACCGTACTCGTTGTCAAGTTGCG AGGTTTGTGCGGGCCGTCGACCCGGAGTTCGAGGTATTGGAGCCGGTGGC AGGGGGAAGGGTCGACACCCGTGGGACTCGACGGCGTTCTGACCGCACGA TCGATCATATTGCAGTGCGAATGGTCGGGCGAGCGACGAAGACGGCGCCT AAGGTACTACGGGACGTTGACATTTCAGACCACTATCCGGTTGTGGGAAC GATTGCGTGCCCGAAGGGGGATGGAGAAGGGGGTACCCAGGAGAGTGTCA GGACGAAAACCACCACACCACGTCGAAAGATCGACAGTGACAAGATACCC GTACCGGGGTCGCACACATACATGCGGGACGGACCTAGGGGGGCAATAAA TCACCAAAAAGTGGTGACGTCCAACTATTGGGCTCCGCTCCTGCAGCTCG CGGAAACGGACACAGGGGAGTTCGATAAAGAGGAACGTCAGGTGGTCGCA GACGCCATGGCGGAACGGTTTGTCGAGACTTGTCATAGGGTGGCAGAGGA ATCGGGCCTAACGGCAACACCGCGGACACCCGGACCCGAACCATTGAAGA AACGAATCGTGCAACGCATCAAGGCCCGAACGAAGGCATACATACAAGCC ATGAAGACTACCCCAAGCACCGATACTAGTAACGGAGCATGGGCGGTATA CGAAGCCCGGAAGAAGGAGGCGATGGCAGAAGTAGAAAAGGACAATCGAG CTAAATGGAAGCGACGCATCCAAAAAGCTTCCGAGCACCTGCAAACTGAA CCACGCAACTTTTGGAAATGGGCGTCTAACATCGCAGGCTGGTCCCCGCG TTGTAAAGTTTCGGGGGTGCAACCCGTGAAACACGCGGGATCCGGATCCC TTCTAACAGAAGTAACTGCCATCTCGGCAGCGTGGCGCGATCACTATGGG CGACTTGCGGCTGACCCTACGGGGAACAGCCAATCACCGGACCGGTGGAC GCGGTGGGGACAATGCCCTCAGAGAAAGCACCTCGAGTACTTAGACGAGG ACATCCCGTACACGGAGATGTTGGAGGCCCTAAATCGGATTCGAAGAAAC AAGGCACCAGGACAAGATGGGATTCCCGCTGACTTACTTAAGTTGGCGGT GGCTGAGGAACCGACCCCTATGGGGAACGCGCTCTTAGCCGTGCTGAACC AGATGTGGAAGTCGAGCACCATACCTTCGGCTTGGCGCAACTCAACAGTA GTTTCGATACCCAAAAAGGGGGACCTTACGGATATGGGAAACTACCGAGG AATATCCCTGATGGCCACAGCACTTAAGGTGCTAGTGGTCGTCCTCAGCA CCCGGCTTAACGGGGCGTTTGAGAAAGAGGGAATATTCAGCAAAGCCCAA GCAGGCTTCCGGAGGAAGGAAGAATGTGTCACCCAAAGTGCCTGCCTTTT AGAGATCACAAAGCGACGTAAACTCATGGGTTTACCCACGTATATGTTGT TCGTGGACCTCAAGAAGGCATATGACACGGTGCCGCAGGAAGCCCTTATG GCGAAACTCGACTTTTATGGAGTGAGGGGACGCACACTCGGGTTTATTCG AGCTCTTTACTCCCAAAGCCGTATCCAGGTACGGGTAGGGGGAACCGTGT CGGAACCAGCCGACCTCCTTCGGGGGTTCGACAAGGGTGCCCCCTGTCGC CTGTTCTGTTCAACATATTCATTAATGATGTGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig108:18555..20687-

>mRNA_A-nodosum_M_contig108.2.1 ID=mRNA_A-nodosum_M_contig108.2.1|Name=mRNA_A-nodosum_M_contig108.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1989bp|location=Sequence derived from alignment at A-nodosum_M_contig108:18555..20687- (Ascophyllum nodosum dioecious)
TTAAGGGTGGGTACTCTAAACGTCAATGGAGTGCGGGGTAAACAAGTCGA
CCTCCGCTATCTACTGGAGAACAGACGAATTGGATGCCTGGCGCTACAAG
AGACATTATTGCGTGCAACGGATTGGAACCTCAACATCCCCGGTTATCAT
TGCTATGCGAGATGCGGGGAGCGGACTGCCTCTACCAGAGGGGTAGCTCT
GCTTCTTAGCAAATCCGAGAGTGGATACCCGGTGGGCCGTAGCTCACCGT
GGTCGATATTCGTGCGATGTACGGGGACCCAACTAGCCCAACCCTGGATA
GTGGCAAGTGTGTATGTACCTTCTGGCAAATCCGAGGGGGCAACCCCGAT
GAAGAAAATACAGGAACAAGTAAAAGCGTTGAGGGAGGAATTTCCCGATG
ACGCAATGGCCATCATGGGCGACTGGAACCGTACTCGTTGTCAAGTTGCG
AGGTTTGTGCGGGCCGTCGACCCGGAGTTCGAGGTATTGGAGCCGGTGGC
AGGGGGAAGGGTCGACACCCGTGGGACTCGACGGCGTTCTGACCGCACGA
TCGATCATATTGCAGTGCGAATGGTCGGGCGAGCGACGAAGACGGCGCCT
AAGGTACTACGGGACGTTGACATTTCAGACCACTATCCGGTTGTGGGAAC
GATTGCGTGCCCGAAGGGGGATGGAGAAGGGGGTACCCAGGAGAGTGTCA
GGACGAAAACCACCACACCACGTCGAAAGATCGACAAGGAACGTCAGGTG
GTCGCAGACGCCATGGCGGAACGGTTTGTCGAGACTTGTCATAGGGTGGC
AGAGGAATCGGGCCTAACGGCAACACCGCGGACACCCGGACCCGAACCAT
TGAAGAAACGAATCGTGCAACGCATCAAGGCCCGAACGAAGGCATACATA
CAAGCCATGAAGACTACCCCAAGCACCGATACTAGTAACGGAGCATGGGC
GGTATACGAAGCCCGGAAGAAGGAGGCGATGGCAGAAGTAGAAAAGGACA
ATCGAGCTAAATGGAAGCGACGCATCCAAAAAGCTTCCGAGCACCTGCAA
ACTGAACCACGCAACTTTTGGAAATGGGCGTCTAACATCGCAGGCTGGTC
CCCGCGTTGTAAAGTTTCGGGGGTGCAACCCGTGAAACACGCGGGATCCG
GATCCCTTCTAACAGAAGTAACTGCCATCTCGGCAGCGTGGCGCGATCAC
TATGGGCGACTTGCGGCTGACCCTACGGGGAACAGCCAATCACCGGACCG
GTGGACGCGGTGGGGACAATGCCCTCAGAGAAAGCACCTCGAGTACTTAG
ACGAGGACATCCCGTACACGGAGATGTTGGAGGCCCTAAATCGGATTCGA
AGAAACAAGGCACCAGGACAAGATGGGATTCCCGCTGACTTACTTAAGTT
GGCGGTGGCTGAGGAACCGACCCCTATGGGGAACGCGCTCTTAGCCGTGC
TGAACCAGATGTGGAAGTCGAGCACCATACCTTCGGCTTGGCGCAACTCA
ACAGTAGTTTCGATACCCAAAAAGGGGGACCTTACGGATATGGGAAACTA
CCGAGGAATATCCCTGATGGCCACAGCACTTAAGGTGCTAGTGGTCGTCC
TCAGCACCCGGCTTAACGGGGCGTTTGAGAAAGAGGGAATATTCAGCAAA
GCCCAAGCAGGCTTCCGGAGGAAGGAAGAATGTGTCACCCAAAGTGCCTG
CCTTTTAGAGATCACAAAGCGACGTAAACTCATGGGTTTACCCACGTATA
TGTTGTTCGTGGACCTCAAGAAGGCATATGACACGGTGCCGCAGGAAGCC
CTTATGGCGAAACTCGACTTTTATGGAGTGAGGGGACGCACACTCGGGTT
TATTCGAGCTCTTTACTCCCAAAGCCGTATCCAGGTACGGGTAGGGGGAA
CCGTGTCGGAACCAGCCGACCTCCTTCGGGGGTTCGACAAGGGTGCCCCC
TGTCGCCTGTTCTGTTCAACATATTCATTAATGATGTGA
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