mRNA_A-nodosum_M_contig10720.4.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: D7G191_ECTSI (Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G191_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 1.220e-14 Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 10 GDATLSARWAIVIGRVLGLGVAVALTFAFLWAPFCIF------SGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVANV 225
G AT R + V+ RVLGLG V +TF LWAPFC+ G+ + LS++GQV VR+FPFSRGLFEDKVAN+
Sbjct: 260 GTATSLNRLSGVLRRVLGLGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANL 337
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: A0A482S0G5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0G5_9ARCH) HSP 1 Score: 70.5 bits (171), Expect = 1.840e-12 Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 34 WAIVIGRVLGLGVAVALTFAFLWAPFCIFSGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVANV 225
W+ ++ +G+ V TFA LW PFC++ A T LSSLG VL R FPFSRG+FEDKVAN+
Sbjct: 226 WSAKFSKLAVIGLTVLATFAVLWVPFCLWPSAEE--TCLSSLGHVLSRQFPFSRGIFEDKVANI 287
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: A0A8K1CIN0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIN0_PYTOL) HSP 1 Score: 69.3 bits (168), Expect = 4.700e-12 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 52 RVLGLGVAVALTFAFLWAPFCIFSGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVANV 225
++ L VAV TFA +W PFC++ A G T SS+GQVL R+FPF+RGLFEDKVANV
Sbjct: 256 HLVKLAVAVIATFAVMWLPFCLY--AREGETCASSVGQVLHRVFPFARGLFEDKVANV 311
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: A0A7S3H9F0_9STRA (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9F0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 6.420e-12 Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 64 LGVAVALTFAFLWAPFCIFSGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVANV 225
LG+ V TF LWAPFC+F T L+SLGQVL R FPFSRG+FEDKVAN+
Sbjct: 236 LGITVISTFGLLWAPFCVFHSPED--TCLTSLGQVLHRQFPFSRGIFEDKVANL 287
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: G4YVW2_PHYSP (Alpha-1,3-glucosyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=G4YVW2_PHYSP) HSP 1 Score: 67.8 bits (164), Expect = 1.630e-11 Identity = 31/57 (54.39%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 52 RVLGLGVAVALTFAFLWAPFCIFSGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVAN 222
++ L VAV +TFA +W+PFC+++ ++G T LS++ QV+ R+FPF RGLFEDKVAN
Sbjct: 245 HLIKLAVAVIVTFALMWSPFCVYT--STGETCLSTMAQVVHRIFPFGRGLFEDKVAN 299
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: A0A7S2KY17_9STRA (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KY17_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.280e-11 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 49 GRVLGLGVAVALTFAFLWAPFCIFSGAA-SGGTYLSSLGQVLVRMFPFSRGLFEDKVANV 225
G+ LGV+V LTFA LW PF I+ A+ S +L + QVL R+FPF RGLFEDKVAN+
Sbjct: 186 GKFCALGVSVILTFAVLWLPFAIYPRASLSTKFHLDGISQVLKRLFPFQRGLFEDKVANI 245
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: A0A1V9YSV9_9STRA (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSV9_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.760e-10 Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 52 RVLGLGVAVALTFAFLWAPFCIFSGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVAN 222
R + L VAV LTF+ LWAPFC++S + T L L QVL R+FP RGLFEDKVAN
Sbjct: 6 RFVKLAVAVILTFSLLWAPFCLYSSS----TCLDGLLQVLHRIFPVGRGLFEDKVAN 58
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: A0A5D6Y746_9STRA (Alpha-1,3-glucosyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y746_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 6.940e-10 Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 52 RVLGLGVAVALTFAFLWAPFCIFSGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVAN 222
+L LGVAV TFA LW PFC+ G T ++S+ QVL R+FPF+RGLFEDKVAN
Sbjct: 251 HLLKLGVAVVGTFALLWLPFCL--RPFEGETCVTSVLQVLHRIFPFARGLFEDKVAN 305
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: A0A1V9Z1G8_9STRA (Alpha-1,3-glucosyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1G8_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 9.450e-10 Identity = 36/60 (60.00%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 46 IGRVLGLGVAVALTFAFLWAPFCIFSGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVANV 225
I R L L VAV TFA LWAPFCI+ G L QVL R+FP RGLFEDKVANV
Sbjct: 229 IARFLKLAVAVIGTFALLWAPFCIYHD----GPCADGLLQVLHRIFPVGRGLFEDKVANV 284
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Match: W2RC32_PHYPN (Alpha-1,3-glucosyltransferase n=14 Tax=Phytophthora TaxID=4783 RepID=W2RC32_PHYPN) HSP 1 Score: 62.8 bits (151), Expect = 9.480e-10 Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 52 RVLGLGVAVALTFAFLWAPFCIFSGAASGGTYLSSLGQVLVRMFPFSRGLFEDKVAN 222
+L L VAV TFA +W+PFC + T LS++ QV+ R+FPF RGLFEDKVAN
Sbjct: 248 HLLKLAVAVIATFALMWSPFCAYPSQEE--TCLSTIAQVVQRIFPFGRGLFEDKVAN 302 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10720.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10720.4.1 >prot_A-nodosum_M_contig10720.4.1 ID=prot_A-nodosum_M_contig10720.4.1|Name=mRNA_A-nodosum_M_contig10720.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=75bp REVGDATLSARWAIVIGRVLGLGVAVALTFAFLWAPFCIFSGAASGGTYLback to top mRNA from alignment at A-nodosum_M_contig10720:3408..4376+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10720.4.1 ID=mRNA_A-nodosum_M_contig10720.4.1|Name=mRNA_A-nodosum_M_contig10720.4.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=969bp|location=Sequence derived from alignment at A-nodosum_M_contig10720:3408..4376+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10720:3408..4376+ >mRNA_A-nodosum_M_contig10720.4.1 ID=mRNA_A-nodosum_M_contig10720.4.1|Name=mRNA_A-nodosum_M_contig10720.4.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=225bp|location=Sequence derived from alignment at A-nodosum_M_contig10720:3408..4376+ (Ascophyllum nodosum dioecious)back to top |