mRNA_A-nodosum_M_contig1072.5.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 253 bits (645), Expect = 3.210e-76 Identity = 122/172 (70.93%), Postives = 142/172 (82.56%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQF 516
L EFGL P LASGTTDSGSD+K V T L Y VLW WC CHL VKAAEQA+G+ DPAKSKNP AR++L+ V KVVE LNKSP K+KF+DLQ++M+ ++FK+VKHAPQRWLSLTRT+ER IRLWHVLRKLYSDEG FPL++G KD ILQLYSL+QPLS+ITRDGQ+
Sbjct: 321 LEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQY 492
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE) HSP 1 Score: 231 bits (588), Expect = 1.420e-71 Identity = 110/175 (62.86%), Postives = 137/175 (78.29%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQFAGV 525
L+EFGL DLASGTTDSGSD+K V GL Y VLW+WC CHL VKAAE AFG DP KSKNP R++L++V +V L+KSP L +KF+D+Q++++ ++ KI APQRWL+L RTLER+IRLWHVLRKL+SD G FPL++G NKD ILQLYSL+QPLS++TRDGQ+ GV
Sbjct: 234 LHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSVTRDGQYGGV 408
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 221 bits (563), Expect = 6.740e-69 Identity = 106/174 (60.92%), Postives = 132/174 (75.86%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQFAG 522
L+EFGL DLASGT DSGSD+K V GL + VLW+WC CHL VKAAE FG DP KSKNP AR++L+ + +V L++S K+KFDDLQ++++ +V KI AP+RWL+L RTLER+IRLWHVLRKLYSD G FPL++G NKD ILQLYSL+QP S++TRDGQ+ G
Sbjct: 88 LHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGG 261
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.550e-68 Identity = 107/172 (62.21%), Postives = 131/172 (76.16%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQF 516
L EFGL P DLASGTTDSGSD+K GL Y VLW+WC CHL VKAAE FG DP KSKNP AR++L++V +V LN+S K+KF+DLQ++++ DV KI APQRWL+ RTLER+IRLWHVLRKLYSD G FPL++G NK+ ILQL+SL+Q LS++TRDGQ+
Sbjct: 37 LREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQY 208
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 218 bits (556), Expect = 2.840e-66 Identity = 106/175 (60.57%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQFAGV 525
LNEFGL P DLASGTTDSGSD+K V GL Y VLW+WC CHL VKAAE AFG DP SKNP AR +L+++ ++ L+KS L +KF+DLQ++++ +V I APQRWL+L RT+ER+IRLW V+RKLYSD G FPL++G NKD I QLYSL+QPLS++TRDGQ+ G+
Sbjct: 69 LNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGL 242
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 221 bits (562), Expect = 1.090e-64 Identity = 108/175 (61.71%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQFAGV 525
L EFG+ DLA GTTDSGSD+K + LL ++ WDWC CHLA +AAEQAFG SADP K KN AR +++ V K K+N+SP K KFD+ QL+M +V KI KHAPQRWLSL R +ERIIRLWHVLRK+Y+++G+ FPLD+G NKD ILQLYSL++PL+AITRDGQ+ V
Sbjct: 304 LREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAV 478
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.930e-64 Identity = 101/172 (58.72%), Postives = 132/172 (76.74%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQF 516
L E+G+ DLA GTTDSGSD+K + LL +++ WDWC CHLA K+AE FG SADP +SKN AR++++ V K K+N+S +K KF+ + LEM+ ++ KI KHAPQRWLSL +ERIIRLWHVLRK+Y+++G FPLD+G+N+D ILQLYSL+QPLSAITRDGQ+
Sbjct: 285 LAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQY 456
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 217 bits (552), Expect = 2.260e-64 Identity = 105/175 (60.00%), Postives = 132/175 (75.43%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQFAGV 525
L+EFG P DLASGTTDSGSD+K V GL Y VLW+WC CHL +KAAE AFG DP KSKNP A +L+++ +V L+KS L +KF+DLQ++++ +V KI APQRWL+L RT+ER+IRLWHVLRKLYSD G F L++G NKD I QLYSL+Q LS++TRDGQ+ G+
Sbjct: 77 LHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGL 251
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE) HSP 1 Score: 197 bits (502), Expect = 2.200e-59 Identity = 101/174 (58.05%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 1 LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQFAG 522
L+EFGL P DLASGTTDSG D+K V GL + VLW+ C HL VKAAE FG DP KSKNP AR++L+ + +V L++S K+KF DLQ+++ +VF APQRWL+L TLER+IRLWHVLRKLYSD G FPL++G D ILQL SL+QPLS++TRDGQ+ G
Sbjct: 45 LHEFGLRPSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSVTRDGQYGG 216
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 189 bits (479), Expect = 1.910e-53 Identity = 91/158 (57.59%), Postives = 118/158 (74.68%), Query Frame = 1
Query: 52 SGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKLNKSPTLKSKFDDLQLEMVHDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLMQPLSAITRDGQFAGV 525
SGSD+K V GL Y VLW+WC CHL VKAAE AFG DP SKNP AR +L+++ ++ L+KS L +KF+DLQ++++ +V I APQRWL+L RT+ER+IRLW V+RKLYSD G FPL++G NKD I QLYSL+QPLS++TRDGQ+ G+
Sbjct: 215 SGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGL 371 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1072.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1072.5.1 >prot_A-nodosum_M_contig1072.5.1 ID=prot_A-nodosum_M_contig1072.5.1|Name=mRNA_A-nodosum_M_contig1072.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=175bp LNEFGLTPGDLASGTTDSGSDIKWVGTVGLLDTYEVLWDWCPCHLAVKAAback to top mRNA from alignment at A-nodosum_M_contig1072:185822..186348- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1072.5.1 ID=mRNA_A-nodosum_M_contig1072.5.1|Name=mRNA_A-nodosum_M_contig1072.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=527bp|location=Sequence derived from alignment at A-nodosum_M_contig1072:185822..186348- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1072:185822..186348- >mRNA_A-nodosum_M_contig1072.5.1 ID=mRNA_A-nodosum_M_contig1072.5.1|Name=mRNA_A-nodosum_M_contig1072.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=525bp|location=Sequence derived from alignment at A-nodosum_M_contig1072:185822..186348- (Ascophyllum nodosum dioecious)back to top |