mRNA_A-nodosum_M_contig1071.22.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1071.22.1
Unique NamemRNA_A-nodosum_M_contig1071.22.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: A0A6H5K3N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N3_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 6.710e-98
Identity = 178/341 (52.20%), Postives = 237/341 (69.50%), Query Frame = 3 
Query:   96 SRFRQTSGKPPPFRVRVYNDRLFESIIEDGKQSFLSG-SCEQSVKSKHSRRTQPNSSLGLQVSESSTEAKAAKRQRREEQYHLQRAQQKHIQDNFVRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMSGESLSKTKPFLRETLDVKLWEDRRVKDTPHGFFAKIMDRETTKK---GTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKTFPGHSTSSLPLFPAKA 1106
            S + Q S +PP FRVRVYND LF+S+++DG+ S  S  S  +S KS+ SR  Q + S  +  +        AK++RRE+QY  Q  QQ+ +QD  VR+ L +AA  KE+EFV L+GE+ AG  FV+EL++  GI +E +R + LKQ+Q+WD NVHGAIQ RID++L  M + +INERRR DL+KFL  TN+KAA+FRDIIIESEYDPLEPNR A+K +V  LR+PC RVLDKRA+EN +++ E +      LRE+ DV  WE+R+V DTPHGFFAK+M RE  +    G    S+T+ +T K DDYN +RGRD+VTKEFP GKKT+P     + P   A++
Sbjct:   18 SPYAQPSNRPPAFRVRVYNDGLFKSLLDDGRTSSTSPRSLGRSAKSRPSRPPQEDRSEAMLKA-----GALAKKKRREKQYLFQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEIEAGRTFVKELDRILGIADEAQRGKTLKQYQEWDANVHGAIQGRIDKVLDKMSSKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAVKAKVGHLRDPCSRVLDKRAQENGLLADEGVGGAGAMLRESFDVIQWEERKVHDTPHGFFAKMMGREAARNKMGGASTTSKTYRSTIKMDDYNVDRGRDIVTKEFPKGKKTYPAGDELAPPSSDAES 353
[Close]
BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: D8LIN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN6_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 2.810e-86
Identity = 153/270 (56.67%), Postives = 197/270 (72.96%), Query Frame = 3 
Query:  306 AKRQRREEQYHLQRAQQKHIQDNFVRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMSGESLSKTKPFLRETLDVKLWEDRRVKDTPHGFFAKIMDRETTKK---GTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKTFPGHSTSSLPLFPAKA 1106
            AK++RRE+QY LQ  QQ+ +QD  VR+ L +AA  KE+EFV L+GEV AG  FV+EL++  GI +E ++ + LKQ+Q+WD NVHGAIQ RID++L  M + +INERRR DL+KFL  TN+KAA+FRDIIIESEYDPLEPNR A+K +V  LR+PC RVLDKRAEEN +++ E        LRE+ DV  WE+R+V DTPHGFFAK+M RE  +    G K  S+T+ +T K DDYN +RGRD+VTKEFP GKKT+      + P   AK+
Sbjct:    8 AKKKRREKQYLLQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEVEAGRTFVKELDRILGIADEAQQGKTLKQYQEWDANVHGAIQGRIDKVLDKMSSKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAVKAKVGHLRDPCSRVLDKRAEENGLLADEGAGGAGAMLRESFDVIQWEERKVHDTPHGFFAKMMGREAARNKMGGAKTTSKTYRSTIKMDDYNVDRGRDIVTKEFPKGKKTYAAGDEFAPPSSDAKS 277
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BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: A0A7S2FRU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRU1_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.710e-52
Identity = 122/324 (37.65%), Postives = 190/324 (58.64%), Query Frame = 3 
Query:  129 PFRVRVYNDRLFESIIEDGKQSFLSGSCEQSVKSKHS------RRTQPNSSL---GLQVSESSTEAKAAKRQRREEQYHLQRAQQKHIQ-DNFVRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMSGESLSKTKPFLR--ETLDVKLWEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKTFP 1064
            P RVR+YN+  FE+++ D  +S   G+     ++  S      R  +  S++    L+ +E + EA   ++++R  + H   A++   + +  VRE L   + R+E +F H   ++  G     E++    + +  E+ +  +QF+DW+ NV+G +Q RI E L    + +IN +RR++ +KFL  TNSK AIFRDIIIESEYDPLEPNRN IKV  S +R+PC RV+DK  EE+ M+   S        R  ++L+V +W   +++ TPHGFFAKIM  E+ K+G+K+ S+T+ +   FD YN   G+ +   EFP GK+T P
Sbjct:   12 PSRVRIYNEDHFETLLLDDDKSTQGGASPGKPETSRSGGGGTSRVEEERSAIKARSLRATERAREADLEEQRKRRFERHRDEAKRMQAESERQVRERLVMNSLRREDKFNHYYSDLVEGRRLASEIKTSLDLQDAAEQNKVRRQFEDWNQNVYGKLQNRISERLDRTTSHDINVKRRQEFQKFLDTTNSKGAIFRDIIIESEYDPLEPNRNCIKVDSSDVRDPCSRVVDKNLEESGMLDSPSAMAAAKMARTRDSLEVTMWGTGKIESTPHGFFAKIMANES-KQGSKEKSKTWDSRIPFDHYNVAVGKAITDTEFPRGKRTAP 334
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BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: F0YG16_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG16_AURAN)

HSP 1 Score: 195 bits (496), Expect = 4.360e-47
Identity = 122/330 (36.97%), Postives = 179/330 (54.24%), Query Frame = 3 
Query:  123 PPPFRVRVYNDRLFESIIEDGKQSFLSGSCEQSVKSKHSRRTQPNSSLGLQVSESSTEAKAAKRQR-REEQYHLQRAQQKHIQ-DNFVRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMSGES----------------LSKTKPFLRETLDVKLWEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKT 1058
            P P RV+VY++     ++ D              +S H+           Q SE   +A+ A+ QR R  + H   A ++  + +  VRE L ++A R+E++F  L  ++  GH   +E++Q   + E   R +  +QF +W+  V+GAIQ +I++ L  M ++EIN RRR + +KFL  TN+K AIFRDIIIESEYDPLEPNRN IKV+   +R+P +RVLDK  EE  M+  +                     +P +RETL++  W   +++ TPHG+FAK+MD      G K  S+TF +   FD YN   G     KEFP GK+T
Sbjct:  316 PSPSRVKVYDEDKLAMLLGDAPPPTHQSVTLGRTRSIHAAMR------AQQRSEKRRQAREAEEQRVRRYERHRDEANKRQAEAERAVREQLIESAARRERKFNELRSDIVEGHKLADEIQQHLSLQEMNARTKLKRQFDEWNDGVYGAIQDQINDRLDGMDSSEINRRRRHEFQKFLDTTNAKGAIFRDIIIESEYDPLEPNRNCIKVKTEGIRDPVKRVLDKHHEETSMLDDDGGGDXXXXXXXXXXXXXXXXPRPVVRETLEITSWGAGKIEATPHGYFAKLMDEAKPPAGDKGKSKTFESNIPFDHYNVSVGSAATDKEFPVGKRT 639
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BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: A0A8J2SEP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEP3_9STRA)

HSP 1 Score: 180 bits (456), Expect = 4.740e-45
Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 3 
Query:  381 RELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLK-QFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMSGESLSKTK--------PFLRETLDVKLWEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKK 1055
            RE + + A R+E+ F  L  ++  GH   +E+++   + E++ ++ KLK QF +W+  V+G IQ +I+E L S  A +IN RRRR+ +KFL ATN+K AIFRDIIIESEYDPLEPNR+ IKV    LR+P +RVLD++ EE  M+   S  + K        P  RE LDV+ W   +++DTPHGFFAK+MD      G KK S+T+ +   FD +  ++  D    EFP GKK
Sbjct:  208 RERVAENANRRERRFEFLRSDIVEGHKLADEVQKHLQL-EDMNKQTKLKRQFDEWNSEVYGKIQDQINERLDSTTAAQINARRRREYQKFLDATNAKGAIFRDIIIESEYDPLEPNRHCIKVDTYGLRDPMKRVLDRQYEEQGMLDASSDEEDKKRKPRRPRPHTREVLDVREWATGKIEDTPHGFFAKMMDATPRAPGEKKTSKTYDSKVPFDHFQVQKSLDG---EFPRGKK 437
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BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: A0A482S2M0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2M0_9ARCH)

HSP 1 Score: 169 bits (428), Expect = 2.050e-42
Identity = 94/236 (39.83%), Postives = 140/236 (59.32%), Query Frame = 3 
Query:  357 KHIQDNFVRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMSGESLSKTKPFLRETLDVKLWEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKTFP 1064
            K I DN     L     RKEKEF  L  ++     F+  +E++  + +E +R +  +QF+DW+ NVHG IQ++I   + SM    +N ++ +D +KFL  TN KAAIFRDIIIESEYDPLEPNR+ +K + S+L +P +  L K  +E  M+  E         + TLDV+LW   +++ TP+G FAK+M++ T   G    S T  ++  FD ++F +GR  + KE P GK+ +P
Sbjct:   76 KPIVDNSHLLALEAQKERKEKEFPELLAKIDRAREFLGTVEKEMELADEAKRNKVRRQFEDWNTNVHGVIQKKIASQIDSMDKKALNWKKNQDYDKFLGITNRKAAIFRDIIIESEYDPLEPNRHCVKAKTSKLHDPPKFGLHKAEKEKGMLGAEHAPPKVLLGKNTLDVQLWASGQIEATPYGTFAKMMNKPTGHSGNSPQSATQRSSVAFDHFSFPQGRAAIDKEMPRGKRVYP 311
[Close]
BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: A0A7S1XXV3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXV3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.020e-35
Identity = 91/229 (39.74%), Postives = 130/229 (56.77%), Query Frame = 3 
Query:  378 VRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMSGESLSKTKPFLRETLDVKL--WEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKT 1058
            VRE + + A R+E +F  L   V  GH  V+E+E+D  + +  E  ++ ++F+DW+ NV+G I   I   L      E+N  RRRD ++FL ATN+K A+FRDIII  EYDPL PNR  I+ +   + +P +RVL +R EE  M+ G    K +  L    D+KL  W   +++ TPHGFFA++M      K   K    + ++   D YN   GR VV  EFP GK+T
Sbjct:   92 VREKIAENARRREDDFQALKTSVFEGHQLVDEIEKDMTLKDMNELNKQRRKFEDWNTNVYGKIHGDITRQLNERPYQEVNVNRRRDFQQFLDATNTKGALFRDIIIPEEYDPLAPNRRCIRAQPKTIDDPVKRVLARRDEEERMLEGP---KPQVPLGRKSDLKLEHWASGKIEATPHGFFARMMA-----KPQGKGDNLYASSIVLDHYNIATGRAVVNAEFPRGKRT 312
[Close]
BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: A0A7S3XKK9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKK9_HETAK)

HSP 1 Score: 135 bits (341), Expect = 1.630e-31
Identity = 100/285 (35.09%), Postives = 148/285 (51.93%), Query Frame = 3 
Query:  258 SSLGLQVSESSTEAKAAKRQRREEQYHLQRAQQKHIQ-------DNF--VRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKA-AIFRDIIIESEYDPLEPNRNAIKVRVSR-LRNPCRRVLDKRAEENCMMSGESLSKTKPFLRETLDVKLWEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKTFPGHSTS 1079
            S  G+  S+ + E  A KR+ R ++   QR   +H +       DN   V+  L      +EK+F  L  +V  G    EE ++   + +   R +  KQF +W+  V+G +Q +I E L      E+  +R +  + +L  +N K  A+FRDIIIESEYDPL PNR AI+VR  R LR+P RRV D+  EE  +++   +S+ +P +RETL V  W   +++ T HGF  K+M R  ++   K    T       D YN E+      +EFP GK+ FP H  S
Sbjct:    1 SDFGVGKSQKALEKAAEKRRTRNQREAKQRRYNRHKETIDRLHADNATKVKAKLADNQANREKKFEDLMYDVKMGKELTEEADRAIALYDTARRLKTEKQFDEWNTGVYGHLQEKICEDLDRRDYKELQRQRNQAFQDYLDTSNKKGGAVFRDIIIESEYDPLAPNRGAIRVRGGRALRDPTRRVNDRHHEEQSLLAEGRVSR-EPKVRETLRVGEWATGKIEATSHGFMHKMMHRNPSEHDGKPTHSTIA----MDHYNIEKSSKFTNQEFPIGKRIFPEHHKS 280
[Close]
BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: A0A6G0XK92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK92_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.810e-29
Identity = 85/251 (33.86%), Postives = 136/251 (54.18%), Query Frame = 3 
Query:  342 QRAQQKHIQDNFVRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCM------MSGESLSKTKPFLR------ETLDVKLWEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKT 1058
            Q A QK +Q N + E L +   ++E  F+ L  ++  G +  EEL +   + EE  +R+K + + +W   V+  + R I+E + SM    +N+ ++   + FL   N K  +FRDIIIESEYDPL  N+ A+K R +R+ +PC RVL  R EE+ +      +  ES+  T           + LD KLW     + TP+G+F K+M    +++ +K    T+ +  KFD Y+ E+G   + +EFP GK+T
Sbjct:   10 QEAIQKQVQIN-IAEALTKQRNKREANFLKLRNDIEEGKVLAEELGERLTLKEETAKRQKQRLYDEWTEKVYNKLNRPINEKIKSMDPKALNQHKQEAYQHFLDTVNKKGCLFRDIIIESEYDPLNDNK-AVKYR-TRVDDPCSRVLKTRDEEDAIAKEGRNVMNESMDSTSTSGNVVLGRCDNLDTKLWAKGIFESTPYGYFNKMMASTISEESSK----TYQSRVKFDHYDIEQGSATLNQEFPKGKRT 253
[Close]
BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Match: W4FLA8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLA8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.510e-27
Identity = 100/330 (30.30%), Postives = 163/330 (49.39%), Query Frame = 3 
Query:  138 VRVYNDRLFESIIEDGKQSFLSGSCEQSVKSKHSRRTQPNSSLG---------LQVSESSTEAKAAKRQRREEQYHL-QRAQQKHIQDNFVRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKLKQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAAIFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMS-GESL---------SKTKPFLR---ETLDVKLWEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTFLTTFKFDDYNFERGRDVVTKEFPDGKKT 1058
            +RVYN   FE++ ++   +  S + E+       +RT  +SS+G          + S+ ST  +  +   + E Y   Q   QK IQ N    L  Q   ++E  +V L  ++  G    EELE+   + EE  +R+K + + +W   V   I   I++ + +M A  +N  ++   + FL   N K  +FRDIIIESEYDPL  N++   V  + + +PC RV+  R EE  + + G+ +         + T P +    + LD KLW     + TP+G+F K+M    + + +K    T+ +  KFD Y+ E+G   + KEFP GK+T
Sbjct:    3 IRVYNKDQFEALQQNALNNSKSPTSEK-------QRTPRSSSVGGGSGGYPHSAKTSDLSTNTRQKRLMMKHELYKKDQEDVQKQIQVNIADSLTKQR-NKREANYVKLRRDIDEGKSLAEELEERLSLKEETAKRQKQRLYDEWSEKVFNKINGPINDRVKAMDAKALNLHKQEAYQHFLDTANKKGCLFRDIIIESEYDPLHDNKSIRHV--THVDDPCCRVIKHREEEEAIANEGKKVLDDSMEPRGTGTAPLILGRCDNLDTKLWASGIFESTPYGYFNKMMASTISAESSK----TYESRVKFDHYDIEKGLGTLNKEFPKGKQT 318
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1071.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3N3_9PHAE6.710e-9852.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIN6_ECTSI2.810e-8656.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FRU1_9STRA1.710e-5237.65Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YG16_AURAN4.360e-4736.97Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2SEP3_9STRA4.740e-4544.87Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A482S2M0_9ARCH2.050e-4239.83Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1XXV3_9STRA2.020e-3539.74Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XKK9_HETAK1.630e-3135.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6G0XK92_9STRA3.810e-2933.86Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FLA8_9STRA2.510e-2730.30Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1071contigA-nodosum_M_contig1071:220562..227442 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIN6
Model size3960
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue4.16e-95
EggNOG OGs29M9N@1|root,2RUJB@2759|Eukaryota
Cds size1056
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1071.22.1prot_A-nodosum_M_contig1071.22.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1071 224358..227368 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866459.265086-UTR-A-nodosum_M_contig1071:220561..2208711680866459.265086-UTR-A-nodosum_M_contig1071:220561..220871Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1071 220562..220871 -
1680866459.2765114-UTR-A-nodosum_M_contig1071:221405..2215081680866459.2765114-UTR-A-nodosum_M_contig1071:221405..221508Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1071 221406..221508 -
1680866459.2848377-UTR-A-nodosum_M_contig1071:221940..2243571680866459.2848377-UTR-A-nodosum_M_contig1071:221940..224357Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1071 221941..224357 -
1680866459.3748848-UTR-A-nodosum_M_contig1071:227368..2274421680866459.3748848-UTR-A-nodosum_M_contig1071:227368..227442Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1071 227369..227442 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866459.2960277-CDS-A-nodosum_M_contig1071:224357..2245401680866459.2960277-CDS-A-nodosum_M_contig1071:224357..224540Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1071 224358..224540 -
1680866459.3081017-CDS-A-nodosum_M_contig1071:224803..2249281680866459.3081017-CDS-A-nodosum_M_contig1071:224803..224928Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1071 224804..224928 -
1680866459.3186557-CDS-A-nodosum_M_contig1071:225230..2253501680866459.3186557-CDS-A-nodosum_M_contig1071:225230..225350Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1071 225231..225350 -
1680866459.3288946-CDS-A-nodosum_M_contig1071:225641..2257741680866459.3288946-CDS-A-nodosum_M_contig1071:225641..225774Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1071 225642..225774 -
1680866459.337823-CDS-A-nodosum_M_contig1071:226002..2261181680866459.337823-CDS-A-nodosum_M_contig1071:226002..226118Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1071 226003..226118 -
1680866459.3516767-CDS-A-nodosum_M_contig1071:226589..2268101680866459.3516767-CDS-A-nodosum_M_contig1071:226589..226810Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1071 226590..226810 -
1680866459.360971-CDS-A-nodosum_M_contig1071:227210..2273681680866459.360971-CDS-A-nodosum_M_contig1071:227210..227368Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1071 227211..227368 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1071.22.1

>prot_A-nodosum_M_contig1071.22.1 ID=prot_A-nodosum_M_contig1071.22.1|Name=mRNA_A-nodosum_M_contig1071.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=352bp
MTDVRSSSRFRQTSGKPPPFRVRVYNDRLFESIIEDGKQSFLSGSCEQSV
KSKHSRRTQPNSSLGLQVSESSTEAKAAKRQRREEQYHLQRAQQKHIQDN
FVRELLHQAATRKEKEFVHLTGEVAAGHLFVEELEQDFGIDEEVERRRKL
KQFQDWDFNVHGAIQRRIDEILASMCATEINERRRRDLEKFLVATNSKAA
IFRDIIIESEYDPLEPNRNAIKVRVSRLRNPCRRVLDKRAEENCMMSGES
LSKTKPFLRETLDVKLWEDRRVKDTPHGFFAKIMDRETTKKGTKKVSRTF
LTTFKFDDYNFERGRDVVTKEFPDGKKTFPGHSTSSLPLFPAKANTSSST
E*
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mRNA from alignment at A-nodosum_M_contig1071:220562..227442-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1071.22.1 ID=mRNA_A-nodosum_M_contig1071.22.1|Name=mRNA_A-nodosum_M_contig1071.22.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6881bp|location=Sequence derived from alignment at A-nodosum_M_contig1071:220562..227442- (Ascophyllum nodosum dioecious)
TATCTTGGCTTCCTTGGACTTATTTGTCGCTATATTCTACCTTGAAGGGG
AGTTGAGCAACTGCGACGAGAATCATGACAGACGTGCGCTCGAGTTCGCG
GTTTAGGCAAACGTCAGGAAAACCACCACCCTTTCGCGTTCGTGTTTACA
ACGACCGCCTCTTTGAGTCTATTATCGAGGACGGAAAGCAAAGCTTTCTA
AGCGGGTCGTGCGAACAATCAGTAAAGTCCAAGTGAGTTCGAGTGATCTC
TTCGAGAGCTTTCTGTTGTACATCTGTGTCACTTCTCGCCACAGCTCTCT
CGAAACGTCACTATTAATAGCTTAATATGCTGGCCTACAGTATGGGGGAT
GCTCAGAAGGTCTAGGTGCATTCAGATTTTTCTTTAAATTACGTGGATGT
CACAACTTTCTGAACAAAGTGATCTTTGCTCCGTTCCGAAACCTTTAGCC
ATAGACCATTCGCCAACAATCGCCTTTGAGACTAAGGCCTGAGGAGTAAC
GTTTAGCTCAGCAAATTTTCAACACGGAGTGCTGCTGTCGTACTGAAAGT
TTGCCCTTGGTGTTTTGAAACGGGGGATTTCCTGAAAAAATCACTATATA
TTGCACCACGACGATGTCTTCCGCATGATAAGGCACTCTCGCCGGACGCA
GCCGAATAGCTCTTTAGGTTTGCAAGTATCTGAAAGCAGCACGGAGGCAA
AAGCAGCCAAAAGACAACGAAGGGAAGAGCAGTACCACCTGCAGCGGGCA
CAGCAAAAACATATTCAGGACAATTTTGTGAGGGAACTCCTCCACCAAGC
CGCAACAAGGAAAGAGAAAGAGTTTGTTCATCTCACCGGAGAGGTTGCCG
CAGGTGATCAACAGGCAAACTTAGTTATAGTCACAAGGAGAGGTTAGTGT
GGTTGCAGAACACGAAGAGCCGTCTCCGCTGGTATCCACCATTAGGGCGA
GGTCGAACTCCGTGTTTCGCCCCGGATTTCCAGTTTCCAGATACCGCGCG
TACAGTATTTCAAACACGTGCGTTCGGTACTCGTTAACAACATCGTCGTC
TGGGGCAAATAATTAAGATCGGATACCTAATACTATGTGCACTGCAATCA
GCTACGCAGGAAGAACTGCGTAGAATGCGACGTGCTAACCATGAATCGCC
AGCCACCGAACAGGCAATTTTTTTAACAAGTGATCGGTCGGTACTAACCA
TACCTGCAAGCCGCCGACATATTGGTAATGCTTCGAGGTAAGGCTTCCAG
CTGCTCTCATATTTCGAAAGAAAAAGGAAAACGCCACCTGACACATTTTT
TTTCTTTCGTACTTTTTCGCGCAGGCCATTTGTTTGTAGAGGAGTTGGAA
CAAGATTTCGGGATCGATGAAGAAGTTGAGCGGAGAAGAAAGCTGAAGCA
ATTCCAGGATTGGGACTTTAACGTCCATGGCGCAATTCAGGTAGATAAAT
GTGACGATTCTGAAGCGCGCCCTCCCTCCCTATGGCATGTGCCCTATTTG
GAGCTACCGGTCCATTTCATACCCGGAGTATAAGGTAGCCCCCTTTCGTC
GATATACTGCGCGTGCCTTTTAAAGCACGTTGTATGCTGTCGTGCATTGT
AATCATTCAGCAGTTCTTGAAAGCTTCCCCCTGTCCCTGCTGAAATGTTG
TCCTCGCTATGGATTCAGCGGAGAATTGACGAGATCCTGGCGTCTATGTG
TGCGACGGAAATCAATGAACGTAGGCGCCGGGACCTCGAAAAGTTCCTTG
TGGCGACCAACTCAAAAGCAGCTATCTTCCGTGATATCATCATCGAATCA
GGCACCTGGAATCCGTGTCTGAGTTTGGTCGATTGTTGTTCATCACTCTA
AGTGCAATATTGTGCCTTTAGCTCGGTAATCCTATGAATGGTCGACGCGA
ATCAAGCGTGTGCTTGATTAACGTCGAGCGTCCTGCTGATCCTAACGCTT
GCGGCAAATGCGGACGATATTTGCGCTCGAGCTACCTGTATATTTCAAGC
AAGTGGCTTCAAACACAACGTCGTGTCTGTGCGACCCCTACCCTGTCGTT
GTGTATCAAATAAACAACGTCGATGTATATGTTTGGTAACAGAGTATGAC
CCCCTGGAGCCCAACAGGAATGCTATCAAGGTCCGCGTTAGCCGCCTGCG
TAATCCTTGCAGGCGCGTTCTGGACAAGCGCGCAGAAGAAAACTGTATGA
TGTCAGGCGAAAGTGAGTACAGCGCATATCATGACTTGGGCCGTACTAAG
CACGCCCCGCGGCTATTTCCGACGTGACGTTTCTGAGTCAGTATCGTATT
TTTTGCTAATGGCTGGCTCCGGAAAATCGTAGAGCAATAGGCCCTGCGTA
CACGGGACCACCTCGTCTTCGGCCAGCACTTTGTGTTTCGGAGAGATTAT
CAAATGTAGATGACGGAGTGATTGCAGGAATGCACCTCTCTCTCCCCAAA
TCCCCGACTTGACGACCTGGTCTCCGTAATATCTGTGATCATCACGAAAC
GCGTACCCATCCAGGTTTAAGTAAAACAAAACCGTTCTTGAGAGAAACAC
TTGACGTGAAACTGTGGGAAGATCGACGCGTCAAAGACACGCCGCATGGT
TTCTTTGCCAAAATCATGGACAGGGAGACCACTAAGAAGGTGGGGTTGCA
CTTTTTGCGATCTAAGTACTTACTATTAATACAAATAGAATATATTGTTA
TCAGGTGGCTGTTTCTCGTACGAGTCCATGGCATGTCGATGACGCCCTAG
GCATTCGCCATTCATTGCAATCTATGAAAATGTCCATATACCACTGTCCA
GATTCGGGCTGATACAGCTTCTTTCGCCGACTGTCCCAAAAACTAACCCT
AACGCTCAACAAAATTATTTTATTTGTTCGATGCGATTTGTTTTTTCAAA
AGGGGACGAAAAAGGTCTCCAGAACGTTCTTGACCACCTTTAAGTTCGAT
GATTATAACTTCGAACGCGGAAGGGACGTGGTCACGAAGGAATTTCCAGA
CGGAAAAAAGACATTTCCAGGACATTCAACATCATCTCTGCCTCTCTTTC
CAGCGAAGGCAAATACGTCATCGTCCACAGAATAACGCAACGGTCTGTGT
GAGTTACACAGTTGTCCATCTAAGTCTGGGGGTGGGGGGGGGGTCTGCTT
TTTTCCGGTGCATCTTCTTACCGAGCAAAATATATGTATGTTTGAAGTAG
CTTTTTTGTAGACACCGTGGCTACCATCCTCTGCTCTATCATTTTCACCA
CGTGATTTCTTGTGAATGAGCTGCGCGCCTTTTCATACAACTTTTTTATG
CTTGTGTGCATAGTGTACTACGCTGATTTCATTTGTATTGAGTCTTCACT
CTCTCTAACTATGGGCCAGCTCCTCAATATCATAGCTTCAGACTTGAAAT
AGAAGCCGTGCGGGAGAGAAATTTGACTTGTTAGATACCTGAATCGATGG
TAGTTCTCTGAACCAGTCAAATTTACTTATTTAGTGACCTTGAAATGGGA
GCTACCGAGAACCCAAGCGTCTGGGCAAAAGAGGTCAACGCGAATGTTCC
CTTGCCTCAACGGGTTTTAGGTTTTGTTAGTATCCCGTCGTCTGGGGAAG
GACAAACGCGGGTAAGCGTTTGTTGTATGGAAGACAGCTTACATCGGATC
CTGGTGTGTGGCACTTTGATGGGTTCGGATTCCCACCCACTTATATTTCT
TTCTAGAGCTTTTTATCTGTTCTCCGGGATGGTTGAACCCCATCGTCATG
ATTTAAGGACGATATTCCACGAGACTTCATGCGAGGGCAATTAGCGTATC
GCGCCGATAGGAAGAAACGTTTGCCTTCGTGCACACCTCCCTTACCCCAA
AAGTACCCTTTTTTGCCCTCCAGTTCACTGTATATGGTTTCAAAGTACAG
CAAAGTTCGGTCACGTCCAGCATGTCATGTCGGTTTTCTGCCTGCAACTG
TCTACTGTGTCCATATAGTATCCCCGTCAAAGTCTAGTGTGTAGAACGCA
TGGTGAGGTAATTAATTAGGGTAACGAGCTCCACGGTGGCTTTCCACCAA
GTCCAAGACGATCACCAATCTGCATTCCACTTAAGACTGGAATAAATGCA
CACCAGTGCATGTTGCTAATGTAGAGAGGACTATAAGTAGCGATGGGTTA
AATTGGCAGGCATAGTGCCTTGTGATGATGAACGTGAGCGTGAATACAGC
TCACCCCAGGACTCCGAAAGAACTCGGGATGGCGGTGGTTGAGCCTGATC
ATGCTAAAAAAATGCGTTCTTGTTGCTGTTAAACGACGAAAGAGTCTGAG
GCTGGTATTACCAACGTATCGTGAAGGTCAACGCGGGATGCTCATTGGAG
TTGGTTTCTTCTGTAGAAAAAAAATGGCGTTTTAATATAACGGTGGGGTA
CGGGAACAGTTCAACATAAACACTTGGAACTCCAATTCGGGGTCATGGTT
TCAGTATCGGTATGTTTTACATTCAGAATTCCTGGTTTGCCGAAAGCTTC
TGTTGGAAGGGCATAATTTCTTGAAACCTCTGAATGCTTTGTTGTATCGG
GACTGACCATGACAGGCATTCCACAAATATACAACAGCATGCACTATGCC
CCGACCATTATAATCTGAGGGTCAAATAGGCCAAGAATCTCTTTTCAGAC
GGCAGAATTCTCACATGTACAACTTTTCAACTCTCCATGTAGAACTGCAG
ATGGCCAATCGAGCCAGCTAGCTTGCTTCGTACCCAACACAAGCGGAGGT
CCGGCTTCGTGGTACCAGACGTTTTTTTACAGCGTATTTTCCCACACCCG
AGCCTAAACGGCACATACGACTCGACAAGCTCAGACCTCGTGGTACAGGG
CGGGAAGTGACCCTTCCACCGTAACCACTCACTGAGAATAACAATGTTTG
TGATGTCAATGAACCAGTCACGGAAGCTAACGGCGACGATGGCGCAGTCC
TCCCCATTGGAGCAGTACCGAGAACCTCGTCTTCATTGTCGCTTCCCTCG
CGGTCGGTATGCAGGGGATTAGTTTCAATACTCGGCTTCTATTCTGAGTA
GAGAGCTGCCGCCGTTTCAGTGTTATAAGGTTGACCAGGTTCTAATTCAG
TATGCCAGTGTGTAGCAATGTGTTCCGCGTGCGTCAAGCTACAATAATAC
ATTGGTTCTACACCACCGGTGTGTGTCATATGATCACCTCAAGACCCCAC
TCACAGCACCACCCTTCCGTGTAAGACCTATCAACGCCGGAACTTCCAAT
CACGCTTGGCGGGTACCACGAATTTTCTCGAGCTAGAGCGACGTGGGAGT
TTGTCGTTTTGTGCGTCAGAAATTTGGAGTTCTGGTATTTCCATCTACCA
GCACAGCAGCGCTTTGGAGATGCCCGACTAAGGGCAAAGAGTTACCTGCT
TAAGAAGAGCAGGGCGACAACACCGGTCGAGAGAGCGCAAGAGAGAGCGT
GAGCGTCGGTAAGGACGCTGGCCTAGGAATGGAGACAGGGTGCTCCACAA
ACGTGAGTTGTGAGCACTCCACTTTAATTTGGTGAGAACCACTTCGTAAA
AATGACTTTCGCCGAGCAAGAGGTAACCGCAATGTATCGAGAATTAGAAG
TCTTTCGTGAGCGCGTACACAAGCTCAAACAATGCAATATCTCCGACTGT
TAGAAAAGCTTAAACTTTGTGAAGAACTAATGGTTTTGACTGGTGGAAGA
TATGGGCGGAGGGGCAACGAAGGACTGGAGGTGTATGCGTTGATAGTTGA
TCGAGGGTCCCGAACACTGCGATCTTAAGGTAAAGTTTCAACTGCGACGG
CCATTTACACCTTAATAACACAGAGAAAACATGTGGGCCTAGATAAACCG
GCTGAGGCAGGGAATCTGACACTACAGCCACCGCTGCCGTGCAATTTTCC
CCTGCGACGATCGTCTGCATGATCGCCACCACAGCAGCAGTGTTCTTCTT
CTAACGTGGAGCCCGAGGGAGATGACCAAGGCACGCGAAGGAAAATTCCG
CTAGAAGAACGAGTTAGCGAGGAGAATAAGGTCAAGGGTAAGATGAAGCC
TGAGCGGATAACGCTCGATCATTACCTGCTGGTACGTGTGTTGAAGCACC
CAAACAGTCGTGTCTCTTGTGCAGGAAGATGCGATCAATAACCGTCTGCT
CGAGGATTAGAGCAGGGAGGCAGTATATTTCTTCAAGTCATTGTCGGGGT
GAAACCTTACAAATCAACGCTGAAAAGGATAAGACTCCAAATCACGATAG
TGTCGTACTAGTACAGGATGATAGGATGGGTTTCCATATTTGCATTGTGG
GATACTAGATCGGGACACCAGTATTACTGCTCTATGAGGCCCACACAATG
TCAGGTTCCTTTTTGTCTCCTCTATCTATATGCTCACGTAAAGCCTGTCA
ACGCTGCTGCAAGCAGAGCCTCATCATCACGCCCTGAAATAACTCATTAC
GCTAGCGGAAAAGTGTGAGCTTCAGACGTGGTGAGCTTGCAGTAAAGCTA
GGGTTGTGTTGCTTTCAAGTCCCCATCTCAAGAATTCTCAAAAATTCGTA
TGGCTGCGAGGAGACCGACAGGGTCGGGCCCAAAGGATGGAGCCACGAGT
CCCCAAGCACGAGCCACAGCATTTGGCGATAGATTGTCGCAGCTGGAGAA
TGACATGGCCGTGATCAGGGACGGCACAATGAAGGACGTTCAACTCCTGA
AAGACGAGATCGAAGAGATCAACAGAAGGTTTGGTGCAATTGATCGTACG
GGTAATACCCTTGATGATTTGAGGGTGAGAGCAAATTACCATGATAATGA
CATCGCAGATTTGAGAAGACAAGTCGAGCGACACTCGACACCTCTGCCCC
CACCAAACCAGCAGGCGGGAACATTCCCGAT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1071:220562..227442-

>mRNA_A-nodosum_M_contig1071.22.1 ID=mRNA_A-nodosum_M_contig1071.22.1|Name=mRNA_A-nodosum_M_contig1071.22.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1056bp|location=Sequence derived from alignment at A-nodosum_M_contig1071:220562..227442- (Ascophyllum nodosum dioecious)
ATGACAGACGTGCGCTCGAGTTCGCGGTTTAGGCAAACGTCAGGAAAACC
ACCACCCTTTCGCGTTCGTGTTTACAACGACCGCCTCTTTGAGTCTATTA
TCGAGGACGGAAAGCAAAGCTTTCTAAGCGGGTCGTGCGAACAATCAGTA
AAGTCCAAGCACTCTCGCCGGACGCAGCCGAATAGCTCTTTAGGTTTGCA
AGTATCTGAAAGCAGCACGGAGGCAAAAGCAGCCAAAAGACAACGAAGGG
AAGAGCAGTACCACCTGCAGCGGGCACAGCAAAAACATATTCAGGACAAT
TTTGTGAGGGAACTCCTCCACCAAGCCGCAACAAGGAAAGAGAAAGAGTT
TGTTCATCTCACCGGAGAGGTTGCCGCAGGCCATTTGTTTGTAGAGGAGT
TGGAACAAGATTTCGGGATCGATGAAGAAGTTGAGCGGAGAAGAAAGCTG
AAGCAATTCCAGGATTGGGACTTTAACGTCCATGGCGCAATTCAGCGGAG
AATTGACGAGATCCTGGCGTCTATGTGTGCGACGGAAATCAATGAACGTA
GGCGCCGGGACCTCGAAAAGTTCCTTGTGGCGACCAACTCAAAAGCAGCT
ATCTTCCGTGATATCATCATCGAATCAGAGTATGACCCCCTGGAGCCCAA
CAGGAATGCTATCAAGGTCCGCGTTAGCCGCCTGCGTAATCCTTGCAGGC
GCGTTCTGGACAAGCGCGCAGAAGAAAACTGTATGATGTCAGGCGAAAGT
TTAAGTAAAACAAAACCGTTCTTGAGAGAAACACTTGACGTGAAACTGTG
GGAAGATCGACGCGTCAAAGACACGCCGCATGGTTTCTTTGCCAAAATCA
TGGACAGGGAGACCACTAAGAAGGGGACGAAAAAGGTCTCCAGAACGTTC
TTGACCACCTTTAAGTTCGATGATTATAACTTCGAACGCGGAAGGGACGT
GGTCACGAAGGAATTTCCAGACGGAAAAAAGACATTTCCAGGACATTCAA
CATCATCTCTGCCTCTCTTTCCAGCGAAGGCAAATACGTCATCGTCCACA
GAATAA
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