mRNA_A-nodosum_M_contig10701.5.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.550e-26 Identity = 54/71 (76.06%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 1 VLVLNEGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVDE 213
VLVL GRLAGI+TPKDLL RVVAKGL+ D P VMTPNPD VPP MT + AL+EMHENKYLHLPVVDE
Sbjct: 2474 VLVLRNGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTPNPDAVPPAMTVIEALREMHENKYLHLPVVDE 2544
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A6H5K5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J8_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.200e-25 Identity = 53/71 (74.65%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 1 VLVLNEGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVDE 213
VLVL GRLAGI+TPKDLL RVVAKGL+ D P VMTPNPD VPP MT + AL+EMHENKYLHLPVV+E
Sbjct: 590 VLVLRNGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTPNPDAVPPAMTVIEALREMHENKYLHLPVVNE 660
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A836CBL7_9STRA (Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL7_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 9.530e-19 Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 1 VLVLNEGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVD 210
V+V+ G+L GILTPKDLLNRV+AK + D DVMTPNPD+VP M + AL +MHE +YLHLPVVD
Sbjct: 2075 VVVVERGKLVGILTPKDLLNRVLAKDRSPDDTLVSDVMTPNPDSVPADMPVLDALHQMHEQRYLHLPVVD 2144
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A7S3Y3X3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3X3_HETAK) HSP 1 Score: 82.4 bits (202), Expect = 3.280e-18 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 16 EGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVD 210
+GRLAGILTPKD+ NRVVA GL+ PA + MTP PD PP + V A+ +MH+++YLHLP+ D
Sbjct: 69 DGRLAGILTPKDVPNRVVAPGLDPAATPAAEAMTPEPDAFPPDLDLVDAMHQMHDHRYLHLPIAD 133
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A7S3Y3Y8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3Y8_HETAK) HSP 1 Score: 82.4 bits (202), Expect = 4.600e-18 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 16 EGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVD 210
+GRLAGILTPKD+ NRVVA GL+ PA + MTP PD PP + V A+ +MH+++YLHLP+ D
Sbjct: 84 DGRLAGILTPKDVPNRVVAPGLDPAATPAAEAMTPEPDAFPPDLDLVDAMHQMHDHRYLHLPIAD 148
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A197KC40_9FUNG (CBS-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KC40_9FUNG) HSP 1 Score: 84.7 bits (208), Expect = 1.530e-17 Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 4 LVLNEGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVD 210
LV+ EGR+AGI T KD++ RV+A GL D VMTP+PDTVP MT + ALK+MH+N YLHLPVVD
Sbjct: 291 LVMEEGRIAGIFTTKDIVVRVMAAGLEPDRTSVIRVMTPHPDTVPSNMTILDALKKMHDNHYLHLPVVD 359
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A1Y2GNZ6_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GNZ6_9FUNG) HSP 1 Score: 82.4 bits (202), Expect = 9.960e-17 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 4 LVLNEGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVDE 213
L++ +GR+ GI T KD++ RV+A GL D VMTP+PDTVP +MT + ALK+MH+N+YLHLP VD+
Sbjct: 291 LIMEDGRITGIFTTKDIVVRVLAAGLEPDRTSVIRVMTPHPDTVPASMTILDALKKMHDNRYLHLPAVDD 360
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A7S3M8U3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8U3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.240e-16 Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 1 VLVLNEGR---LAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPV 204
VLV++ R L GILTPKDLLNRV+AKGL+ D +VMTPNPD V +T + AL+EM+E+KYLHLPV
Sbjct: 253 VLVMDAKRGKELLGILTPKDLLNRVIAKGLSPDETLVSEVMTPNPDCVTGDLTLLEALREMYEHKYLHLPV 323
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A3C0FHZ6_9PROT (CBS domain-containing protein n=1 Tax=Thalassospira sp. TaxID=1912094 RepID=A0A3C0FHZ6_9PROT) HSP 1 Score: 75.9 bits (185), Expect = 8.180e-16 Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 1 VLVLNEGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVD 210
++V N+ RLAGI T +DL+NRVVAKGL+A ++P VMT NPDT+ P A+ AL M +Y HLPV+D
Sbjct: 40 IIVDNDARLAGIFTERDLVNRVVAKGLDAASVPLSKVMTANPDTLSPDDLAMSALDLMSARRYRHLPVLD 109
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Match: A0A433CZU0_9FUNG (Uncharacterized protein (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CZU0_9FUNG) HSP 1 Score: 79.7 bits (195), Expect = 8.850e-16 Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 VLVLNEGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTAVGALKEMHENKYLHLPVVDE 213
VLV+ G +AGI T KD++ RV+A GLN D VMTP+PDT PP+M + AL++MH+ YL+LPV+D+
Sbjct: 246 VLVMEHGEIAGIFTSKDIVLRVIAAGLNPDNCSVVRVMTPHPDTAPPSMNIMDALRKMHDGHYLNLPVLDD 316 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10701.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10701.5.1 >prot_A-nodosum_M_contig10701.5.1 ID=prot_A-nodosum_M_contig10701.5.1|Name=mRNA_A-nodosum_M_contig10701.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=71bp VLVLNEGRLAGILTPKDLLNRVVAKGLNADTIPAEDVMTPNPDTVPPTMTback to top mRNA from alignment at A-nodosum_M_contig10701:14084..14562+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10701.5.1 ID=mRNA_A-nodosum_M_contig10701.5.1|Name=mRNA_A-nodosum_M_contig10701.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=479bp|location=Sequence derived from alignment at A-nodosum_M_contig10701:14084..14562+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10701:14084..14562+ >mRNA_A-nodosum_M_contig10701.5.1 ID=mRNA_A-nodosum_M_contig10701.5.1|Name=mRNA_A-nodosum_M_contig10701.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=213bp|location=Sequence derived from alignment at A-nodosum_M_contig10701:14084..14562+ (Ascophyllum nodosum dioecious)back to top |