mRNA_A-nodosum_M_contig10701.2.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig10701.2.1
Unique NamemRNA_A-nodosum_M_contig10701.2.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 2.400e-82
Identity = 154/219 (70.32%), Postives = 175/219 (79.91%), Query Frame = 3
Query:    6 AKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQEYTTRVGIH 662
            A EVMTPNPT+V +E  AMEAL IML RHFRHLPVR+PRGDVT +LDIAKCLYDAVSRLQR A+++  ++   G AD  ++SMLAELGKGKGKKSKAAMQ LLA M  D    G+ V +LSL ELLK KGEPQLV A D+ R AGKAIARGRKAVLVVD+G L GIFTEKD+LNRVL+KG++PD   V DVMTPNPDTVSSTMTV+EALQE      +H
Sbjct: 1560 ASEVMTPNPTTVLSEDSAMEALSIMLGRHFRHLPVRTPRGDVTGILDIAKCLYDAVSRLQRTAKRKSVDS---GEADEAEMSMLAELGKGKGKKSKAAMQALLAKMFADDPEGGTGV-SLSLAELLKLKGEPQLVFADDSARGAGKAIARGRKAVLVVDNGGLAGIFTEKDMLNRVLSKGINPDEVSVEDVMTPNPDTVSSTMTVLEALQEMHENKYLH 1774          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A836CBL7_9STRA (Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL7_9STRA)

HSP 1 Score: 184 bits (466), Expect = 9.860e-49
Identity = 109/226 (48.23%), Postives = 141/226 (62.39%), Query Frame = 3
Query:    3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEE---KEASAGGGADGVD---LSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQEYTTRVGIH 662
            S   VMT +P  V+ E  AMEALG+M+ERHFRHLPV    G VT VLDIAKCLYDA++RL+R   K+    ++  AG GA+ +    ++M     KG      A MQ L+  M GD        G  SL+++LK  G+   V   DTVR A  A+A GRKAV+VV+ G LVGI T KDLLNRVLAK   PD T+V++VMTPNPD+V + M V++AL +   +  +H
Sbjct: 1557 SVASVMTQSPRCVAMEDSAMEALGVMIERHFRHLPVTDASGAVTGVLDIAKCLYDAITRLERVMAKQSSHSQDLKAGQGAEALKQLTMAMKQHNRKGMSSAQAATMQMLMMQMFGD-------EGEPSLQDVLKTAGQAMFVSPRDTVRDAATAMANGRKAVVVVERGKLVGILTPKDLLNRVLAKDRSPDDTLVSEVMTPNPDSVPADMPVLDALHQMHEQRYLH 1775          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A6H5K5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J8_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 8.890e-41
Identity = 106/225 (47.11%), Postives = 134/225 (59.56%), Query Frame = 3
Query:   15 VMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAEL--------GKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELL-KQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQEYTTRVGIH 662
            VMTP+P  V+    AM+AL  MLE H RHLPV S  G V+ +L+IAKCLYDA+ RL++ A + E+E   GGG  G    + A L         K  GK + AAM  LL      G   G +  + +L ++L +Q GE      GD+    GKAI+R +KAVLV+ +G L GI T KDLL RV+AKGLDPD T V+ VMTPNPD V   MTVIEAL+E      +H
Sbjct:  439 VMTPDPIWVTTTDNAMDALETMLETHSRHLPVVSEEGAVSGMLNIAKCLYDAIRRLEKRALRAEEEG--GGGLSGEKQELAASLMKMHSMKGAKKNGKDTLAAMTMLL-----QGLSDGEEASDPTLEDILSEQTGE--FAEEGDSAAACGKAISRSKKAVLVLRNGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTPNPDAVPPAMTVIEALREMHENKYLH 654          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: B7G2M6_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2M6_PHATC)

HSP 1 Score: 152 bits (385), Expect = 1.430e-39
Identity = 101/212 (47.64%), Postives = 133/212 (62.74%), Query Frame = 3
Query:    3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEP-QLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
            S  EVMTPNPT V+    AM+AL  M+E HFRHLPV   +G V  +LDIAKCL DA+S+L+R +EK    A      D V   M+A+  +G G    AA++ LL +++    G G  +   +LR LL   G+P  LV    ++R  G  +A  RKA LVVDDG LVG+FT KD+++R +AK LD D T V+ VMTP+P+ VS  MTV+EALQ
Sbjct:   72 SVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNSAAE-----DAVKQ-MVAQ--QGAGGAQAAALKALLGNLMSQAFG-GKQMP--TLRSLLA--GKPGTLVDPSTSIRNCGLRMADSRKAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVLEALQ 270          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7S2PMW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PMW1_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.740e-39
Identity = 97/212 (45.75%), Postives = 134/212 (63.21%), Query Frame = 3
Query:    3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDT-VRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
            S   VMT NPT V+    AM+ALG M+E HFRHLPV    G V  +LDIAKCL DA+S+L+++  K++  A+A    D V    +A L +G G    AA+Q LL  ++      G+  G+ +LR LL   G+P  +++  T +R  G  +A  RKA LVV+DG LVGIF  KD+++R +AKGL  + T V+ VMTP+P+TVS  +TV+EALQ
Sbjct:   90 SISSVMTANPTCVAMSDSAMDALGTMVENHFRHLPVVDDNGGVVGLLDIAKCLNDAISKLEKSESKKDGNAAA----DAVK--QMASL-QGAGGAQAAALQALLGPLMAQA--FGNTGGSPTLRSLLA--GKPATIVSPQTNLRDTGIKMAEARKASLVVEDGRLVGIFGFKDMMSRAVAKGLPLESTPVSQVMTPDPETVSPDITVLEALQ 290          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7S3M8U3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8U3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.800e-38
Identity = 97/235 (41.28%), Postives = 135/235 (57.45%), Query Frame = 3
Query:   15 VMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAA----EKEEKEASAGGGADG---VDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNL-SLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVD---DGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQEYTTRVGIHRIQPECGG 686
            VMT NP  V +   A++AL +M++  FRHLPV   +G V  +LDIAKCLYDA+S L++      E  EK+ +  G A      +    A  G+G  K+   A+Q ++ +M G         G + +LR +L   G+ Q VL G T+  A K +A  RK VLV+D      L+GI T KDLLNRV+AKGL PD T+V++VMTPNPD V+  +T++EAL+E      +H    E  G
Sbjct:  103 VMTKNPKCVQSADSALDALEMMVDNRFRHLPVMDEQGVVVGLLDIAKCLYDAISVLEKVQGGGEEGSEKDGAGTGNAMAKAMTEAMKKAAGGRGTNKQQLLAIQAMMETMFG---------GEVPTLRTILGGSGKVQSVLPGATITEASKLMAEMRKGVLVMDAKRGKELLGILTPKDLLNRVIAKGLSPDETLVSEVMTPNPDCVTGDLTLLEALREMYEHKYLHLPVREADG 328          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: C6JVY2_PHATR (Myosin 29 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=C6JVY2_PHATR)

HSP 1 Score: 152 bits (385), Expect = 6.060e-38
Identity = 101/212 (47.64%), Postives = 133/212 (62.74%), Query Frame = 3
Query:    3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEP-QLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
            S  EVMTPNPT V+    AM+AL  M+E HFRHLPV   +G V  +LDIAKCL DA+S+L+R +EK    A      D V   M+A+  +G G    AA++ LL +++    G G  +   +LR LL   G+P  LV    ++R  G  +A  RKA LVVDDG LVG+FT KD+++R +AK LD D T V+ VMTP+P+ VS  MTV+EALQ
Sbjct: 1859 SVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNSAAE-----DAVKQ-MVAQ--QGAGGAQAAALKALLGNLMSQAFG-GKQMP--TLRSLLA--GKPGTLVDPSTSIRNCGLRMADSRKAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVLEALQ 2057          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7R9VL18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VL18_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.410e-37
Identity = 97/212 (45.75%), Postives = 128/212 (60.38%), Query Frame = 3
Query:    3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDT-VRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
            S   VMT +PT VS    AM+AL  M+E HFRHLPV    G V  +LDIAKCL DA+S+L+RA EK        G A    +  +A L +G G    A +Q+LL  ++    G   D  + +LR LL   G+P  V+  +T +  AG+ +A  RKA LVV+DG LVGIF  KD+++R +AK L  D T V+ VMTPNP++VS   TV+EALQ
Sbjct:   96 SVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPVVDDNGAVVGLLDIAKCLNDAISKLERAQEKS-------GSAAEDAVKQMANL-QGAGGAQAAMLQQLLGPLMSQAFG---DKASPTLRSLLA--GKPATVVQPNTTLLEAGQVMAEARKAALVVEDGELVGIFGFKDMMSRAVAKELPLDLTNVSSVMTPNPESVSPETTVLEALQ 294          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7S2RM48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RM48_9STRA)

HSP 1 Score: 144 bits (363), Expect = 4.390e-37
Identity = 93/208 (44.71%), Postives = 126/208 (60.58%), Query Frame = 3
Query:   15 VMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDT-VRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
            VMTPNPT VS    AM+A+  M+E H+RHLPV    G V  +LDIAKCL DA+++L+RA EK    A+     D V+   +A L +G G    A +Q+LL  ++    G  S     +LR LL   G P  V++ DT +   G  +A+ RK+ LVV++G LVG+F  KD++ R +AK L  D T V+ VMTPNP+ VS   TV+EALQ
Sbjct:    1 VMTPNPTCVSMTDSAMDAMSTMVENHYRHLPVVDENGAVVGLLDIAKCLNDAITKLERAQEKGSSSAN-----DAVE--QMAAL-QGAGGSQAAMLQQLLGPLMAQAFGNKSSP---TLRSLLA--GRPSTVVSPDTNLLETGMIMAKARKSALVVENGNLVGLFGFKDMMTRAIAKELPLDLTAVSSVMTPNPEAVSPDCTVVEALQ 195          
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7S2W475_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W475_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.470e-36
Identity = 91/212 (42.92%), Postives = 123/212 (58.02%), Query Frame = 3
Query:   12 EVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELG----KGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVDD-GTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEAL 632
            E+MT NP  VS +  A EAL +M++ HFRHLPV    G + AVLDIAKC+YDA+S++    EK EK     G     D+S   +      +G      A MQ +L  ++    G  +     SL  +L+++     V    TVR AGK +A  +K V VVD+ G LVG+ T KD+ NRVLAKGL PD T+V DVMTPNP+ V+   +++EAL
Sbjct:   12 EIMTKNPKCVSMDDDATEALVMMMDNHFRHLPVLDASGSIVAVLDIAKCMYDAISKI----EKLEKHGKGSG-----DVSQAVKQATRGIRGMSVDQAAVMQAMLGPLMEKMFGGNAQ----SLGTILEKRDFSDSVPPEMTVREAGKVMASIKKGVGVVDESGALVGLLTLKDMNNRVLAKGLSPDETLVQDVMTPNPEAVAPETSLLEAL 210          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6N9_ECTSI2.400e-8270.32Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A836CBL7_9STRA9.860e-4948.23Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A6H5K5J8_9PHAE8.890e-4147.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7G2M6_PHATC1.430e-3947.64Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A7S2PMW1_9STRA2.740e-3945.75Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S3M8U3_9STRA2.800e-3841.28Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
C6JVY2_PHATR6.060e-3847.64Myosin 29 n=3 Tax=Phaeodactylum tricornutum TaxID=... [more]
A0A7R9VL18_9STRA1.410e-3745.75Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2RM48_9STRA4.390e-3744.71Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2W475_9STRA3.470e-3642.92Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10701contigA-nodosum_M_contig10701:7380..9494 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6N9
PFAMsCBS,IQ,MyTH4,Myosin_head,PB1
Model size873
Max annot lvl2759|Eukaryota
KEGG koko:K10357
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.81e-82
EggNOG OGsCOG5022@1|root,KOG0160@2759|Eukaryota
Descriptionmotor activity
Cds size672
COG categoryZ
BRITEko00000,ko03019,ko03029,ko04131,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10701.2.1prot_A-nodosum_M_contig10701.2.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig10701 7397..9310 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866457.7464771-UTR-A-nodosum_M_contig10701:7379..73961680866457.7464771-UTR-A-nodosum_M_contig10701:7379..7396Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig10701 7380..7396 +
1680866457.8209352-UTR-A-nodosum_M_contig10701:9310..94941680866457.8209352-UTR-A-nodosum_M_contig10701:9310..9494Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig10701 9311..9494 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866457.7617161-CDS-A-nodosum_M_contig10701:7396..74861680866457.7617161-CDS-A-nodosum_M_contig10701:7396..7486Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10701 7397..7486 +
1680866457.7703948-CDS-A-nodosum_M_contig10701:7717..79151680866457.7703948-CDS-A-nodosum_M_contig10701:7717..7915Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10701 7718..7915 +
1680866457.7787552-CDS-A-nodosum_M_contig10701:8277..84391680866457.7787552-CDS-A-nodosum_M_contig10701:8277..8439Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10701 8278..8439 +
1680866457.7914598-CDS-A-nodosum_M_contig10701:8862..90331680866457.7914598-CDS-A-nodosum_M_contig10701:8862..9033Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10701 8863..9033 +
1680866457.8034217-CDS-A-nodosum_M_contig10701:9259..93101680866457.8034217-CDS-A-nodosum_M_contig10701:9259..9310Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10701 9260..9310 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig10701.2.1

>prot_A-nodosum_M_contig10701.2.1 ID=prot_A-nodosum_M_contig10701.2.1|Name=mRNA_A-nodosum_M_contig10701.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=224bp
MTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYD
AVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLA
SMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKA
VLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMT
VIEALQEYTTRVGIHRIQPECGG*
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mRNA from alignment at A-nodosum_M_contig10701:7380..9494+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig10701.2.1 ID=mRNA_A-nodosum_M_contig10701.2.1|Name=mRNA_A-nodosum_M_contig10701.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2115bp|location=Sequence derived from alignment at A-nodosum_M_contig10701:7380..9494+ (Ascophyllum nodosum dioecious)
CGAGCGCGAAGGAGGTAATGACTCCCAACCCCACGAGCGTTTCCGCTGAA TCCGGAGCCATGGAAGCCCTCGGGATCATGCTGGAGAGGCACTTCAGACA CCTTCCGGTACGTTCTCTGGATGGATGGCGGTGATGGGCCTTTTAAGCTA ACATTGGCGGTGGAAAGTCTGAAGACAAGTCTGTGTGAAGCCAAGACTCA GGACGCGCTCTTTGGGTGGAACCCCCCTTTTGAGAGAAATGATGGTTTGA ATTGTGAGGTGAACGACCTCAAGCCTCCTCTCATGTACATTTTTCTTGTT TCGTTTTTTTATCCACGCCTAAAAATAATACGCCACAGGTGAGGAGCCCG CGTGGTGACGTCACCGCCGTGCTGGACATCGCAAAGTGCCTGTACGACGC CGTCTCTCGACTGCAACGCGCCGCGGAAAAAGAGGAGAAGGAAGCTTCGG CTGGGGGAGGCGCGGACGGCGTGGATTTATCCATGCTGGCGGAGCTGGGC AAAGGGAAAGGAAAGAAGAGCAAGGCCGCCATGCAGGTGCGGCGACGTGT GTACAGCAGTAACGTAGCTCCTGTCTGACTTTATTTTTTTAATCAAACCG TCGGCACGTAAGGTATTTATAGGTGTAAGTCCCTGGAATTGAAAGTTATA AACTGAAGTTTTCTACTCTGCCGGCGGATGCACGGCACACAGGGGACGTG GTAATTTCTGTTGCTCTCCTCCTCCTTCTCCTCGAAAGCACGCTGTTGGC GTCTGTTCTCATATGATGTCGCCCCCGATGATGGCGTAAATTTTTACTGT GTGTATTTGTGTTTGCAGCTTACCTTTTAACCTTTTGTCGCTTCCACCAT CACCTATACTTGACGTGCCATACGCATTTAACATGTTATACGTAACAGAA GCTGTTGGCGTCGATGTTGGGGGACGGCAATGGGGCGGGGAGCGACGTCG GTAACCTCAGCCTACGAGAACTCTTGAAGCAGAAGGGCGAGCCGCAGCTG GTGCTCGCGGGGGATACTGTCAGGACCGCCGGCAAAGCGATCGCCAGGGG ACGCAAGGCGGTGAGTAGTACACTTCACAGCCAATTTTAGAACCGCAGCT AGGCGCCGTAAAAGTGACGAGAGAGAACAGAGCCCGGGGATCGAAATCCT CCCCCCCCCCCCGAAGTTGACAACGCTTCATTATGGGCAGTATAATATAG AATACTTTGTAGTTAAGAACGAGGTACAGTAGCACTATTTAACGTCTTTG GGAGAATATTTTGACGCGGAAATTATCACATCCGACCAAATGGCGGCGTT TATACACTTTTACCGGTATATACAAGACAGCATAATTCGAGTGACAAAGT CGAGCGAATCTATCTCAGGAGCGTGTTACAGTACATCCCATCAGAGTTTC CTGCGACATTGCACTTGCGTGTGTAACTCGAAAAAATTCCCATGTTCCTC TATGTTTGTCTATGTATATGTACATGTATGTAGGTCCTCGTGGTGGACGA CGGCACGCTGGTTGGCATCTTCACCGAGAAGGATCTGCTGAACCGCGTAC TCGCCAAGGGACTCGACCCCGACCACACGATGGTCGCCGACGTCATGACC CCTAACCCAGACACGGTGTCGTCCACCATGACCGTTATAGAGGCACTGCA AGAGGTGAGTAGTGTCCGACACCCTGTGGTATGGTATGGTATGGTATGGT ATGGAGGTCATGGCGCGTGTTTTATCAACACAAATTGATGGATCGTGCAG ATGGTATATGGTTGCGATATTCCATAATTGTTTATGGATTTTGATGGTAC TCGATGGTGTGGTGTTGTTGAAAGGGTTGAGAGTGATGGCAGCGCCTTCC GCGTACTACGGCGTCACACTTCTCCTACAGTACACGACTCGTGTTGGAAT ACACCGGATTCAGCCTGAGTGTGGAGGATGAGCAGGCTGACGAGGGACGG GACGGCCGAACCTGTGTCTCTCGAGACCAAGTTCTCAGGAGTAAACGAAC GGGGACCCGAGGGAAAAAAAAACGTTCCTTTTCCATGTTATGTTCAGCTG ACATTGAGCAGGATTGGCAACCATTACCCGGTTGATCCATACTCTGCGGA AAATGATGGCCATAC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig10701:7380..9494+

>mRNA_A-nodosum_M_contig10701.2.1 ID=mRNA_A-nodosum_M_contig10701.2.1|Name=mRNA_A-nodosum_M_contig10701.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=672bp|location=Sequence derived from alignment at A-nodosum_M_contig10701:7380..9494+ (Ascophyllum nodosum dioecious)
ATGACTCCCAACCCCACGAGCGTTTCCGCTGAATCCGGAGCCATGGAAGC
CCTCGGGATCATGCTGGAGAGGCACTTCAGACACCTTCCGGTGAGGAGCC
CGCGTGGTGACGTCACCGCCGTGCTGGACATCGCAAAGTGCCTGTACGAC
GCCGTCTCTCGACTGCAACGCGCCGCGGAAAAAGAGGAGAAGGAAGCTTC
GGCTGGGGGAGGCGCGGACGGCGTGGATTTATCCATGCTGGCGGAGCTGG
GCAAAGGGAAAGGAAAGAAGAGCAAGGCCGCCATGCAGAAGCTGTTGGCG
TCGATGTTGGGGGACGGCAATGGGGCGGGGAGCGACGTCGGTAACCTCAG
CCTACGAGAACTCTTGAAGCAGAAGGGCGAGCCGCAGCTGGTGCTCGCGG
GGGATACTGTCAGGACCGCCGGCAAAGCGATCGCCAGGGGACGCAAGGCG
GTCCTCGTGGTGGACGACGGCACGCTGGTTGGCATCTTCACCGAGAAGGA
TCTGCTGAACCGCGTACTCGCCAAGGGACTCGACCCCGACCACACGATGG
TCGCCGACGTCATGACCCCTAACCCAGACACGGTGTCGTCCACCATGACC
GTTATAGAGGCACTGCAAGAGTACACGACTCGTGTTGGAATACACCGGAT
TCAGCCTGAGTGTGGAGGATGA
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